Pregenerated sensors for HHAT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037375Ensembl transcript IDs: ENSMUST00000044190.12, ENSMUST00000128619.8, ENSMUST00000192585.2
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCAGGGACTGTCCTGGAGTGGAGGGTGGTCCCTCAGGGACTGTCCTaGAGTGGAGGGTGGTTTGAGGATGGTCTCAGAATGAGAGATCAG | + |
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Preference number: 1 (lower is better) Translates to: SGTVLEWRVVPQGLS*SGGWFEDGLRMRDQ Trigger: CTGATCTCTCATTCTGAGACCATCCTCAAACCACCCTCCACTCCAGGACAGTCCCTGAGGGACCACCCTCCACTCCAGGACAGTCCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| 3UTR TCA 90 bp | AGGGACTGTCCTGGAGTGGAGGGTGGTTTGAGGATGGTCTCAGAATaGGAGATCAGGATGAAATGCCATGTCCCTTGGAGGCTGAGCTGG | + |
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Preference number: 1 (lower is better) Translates to: RDCPGVEGGLRMVSE*EIRMKCHVPWRLSW Trigger: CCAGCTCAGCCTCCAAGGGACATGGCATTTCATCCTGATCTCTCATTCTGAGACCATCCTCAAACCACCCTCCACTCCAGGACAGTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| 3UTR CCA 90 bp | ACTTCTGTGCAGAACAGCTGTGAGAGGAACCACCATGTTCCTCCATaGCTACAAGTCTCAGAAAGCAGCAGCCCTGTGTGGACTCTCCAA | + |
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Preference number: 1 (lower is better) Translates to: TSVQNSCERNHHVPP*LQVSESSSPVWTLQ Trigger: TTGGAGAGTCCACACAGGGCTGCTGCTTTCTGAGACTTGTAGCCATGGAGGAACATGGTGGTTCCTCTCACAGCTGTTCTGCACAGAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| 3UTR CCA 90 bp | CAGAGGCCTTGCGCAACACCACCTGCATGTGGACATCTTATTCTCTaGCTTTTAAACTCCACTTCTGTGCAGAACAGCTGTGAGAGGAAC | + |
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Preference number: 1 (lower is better) Translates to: QRPCATPPACGHLIL*LLNSTSVQNSCERN Trigger: GTTCCTCTCACAGCTGTTCTGCACAGAAGTGGAGTTTAAAAGCCAGAGAATAAGATGTCCACATGCAGGTGGTGTTGCGCAAGGCCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| 3UTR-3UTR CCA 90 bp | GAGTGGAAGGTAGTCCCTCAGGGACTGTCCTGGAGTGGAGGGTGGTCCCTCAGGCCTCAGGGACTGTCCTaGAGTGGAGGGTGGTTTGAG | + |
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Preference number: 2 (lower is better) Translates to: EWKVVPQGLSWSGGWSLRPQGLS*SGGWFE Trigger: CTCAAACCACCCTCCACTCCAGGACAGTCCCTGAGG...CCTGAGGGACCACCCTCCACTCCAGGACAGTCCCTGAGGGACTACCTTCCACTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGGCCTTGCGCAACACCACCTGCATGTGGACATCTTATTCTCTGGCTTTTGGGACTGTCCTGGAGTaGAGGGTGGTCCCTCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: PEALRNTTCMWTSYSLAFGTVLE*RVVPQG Trigger: TCCCTGAGGGACCACCCTCCACTCCAGGACAGTCCC...AAAAGCCAGAGAATAAGATGTCCACATGCAGGTGGTGTTGCGCAAGGCCTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| 3UTR-3UTR CCA 90 bp | TCTCAGAATTTCTCAGAAAGACATCCCAAGGATGGCAAGCCTATCCCTAACCAGCCTCAGGGACTGTCCTaGAGTGGAGGGTGGTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: SQNFSERHPKDGKPIPNQPQGLS*SGGWSL Trigger: GAGGGACCACCCTCCACTCCAGGACAGTCCCTGAGG...CTGGTTAGGGATAGGCTTGCCATCCTTGGGATGTCTTTCTGAGAAATTCTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| 3UTR-3UTR GCA 90 bp | TCTCAGAATTTCTCAGAAAGACATCCCAAGGATGGCAAGCCTATCCCTAACCAGCTGGACTGTACCTTGTaGGTCAGGAAGCTTCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: SQNFSERHPKDGKPIPNQLDCTL*VRKLLG Trigger: CCCCAGAAGCTTCCTGACGCACAAGGTACAGTCCAG...CTGGTTAGGGATAGGCTTGCCATCCTTGGGATGTCTTTCTGAGAAATTCTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| 3UTR-3UTR CCA 90 bp | GGGAACAAATATCACAGGTATAGTCAGGAAAACCTGAGACTGCTCTGGACTGTAAAATGCCATGTCCCTTaGAGGCTGAGCTGGCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: GNKYHRYSQENLRLLWTVKCHVP*RLSWPS Trigger: GCTGGGCCAGCTCAGCCTCCAAGGGACATGGCATTT...TACAGTCCAGAGCAGTCTCAGGTTTTCCTGACTATACCTGTGATATTTGTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| 3UTR-3UTR GCA 90 bp | TCAGAAAGACATCCCAAGGATGGCAAGCCTATCCCTAACCAGGACTTCCATATCGAGATCAGGATGAAATaGCATGTCCCTTGGAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: SERHPKDGKPIPNQDFHIEIRMK*HVPWRL Trigger: CAGCCTCCAAGGGACATGGCATTTCATCCTGATCTC...GATATGGAAGTCCTGGTTAGGGATAGGCTTGCCATCCTTGGGATGTCTTTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| 3UTR-3UTR CCA 90 bp | GCTGTGAGAGGAACCACCATGTTCCTCCATGGCTACAAGTCTCAGAAAGCAGCATCATTAGAAGATGAGTaGAAGGTAGTCCCTCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: AVRGTTMFLHGYKSQKAASLEDE*KVVPQG Trigger: TCCCTGAGGGACTACCTTCCACTCATCTTCTAATGA...TGCTGCTTTCTGAGACTTGTAGCCATGGAGGAACATGGTGGTTCCTCTCACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| 3UTR CAA 90 bp | GGACATTTAATTGAGGCTAGCTTACAGGTTCAGAAGTTCAGTCCATaGTCATCAAGGCAGGAACATAGCAGCATCCAGGTAGGCATGGTG | + |
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Preference number: 2 (lower is better) Translates to: GHLIEASLQVQKFSP*SSRQEHSSIQVGMV Trigger: CACCATGCCTACCTGGATGCTGCTATGTTCCTGCCTTGATGACAATGGACTGAACTTCTGAACCTGTAAGCTAGCCTCAATTAAATGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128619.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGAAAGACATCCCAAGGATGGCAAGCCTATCCCTAACCAGGACTTCCATATCAAACAAGCAGGTTCATaGGAACAAATATCACAGGTA | + |
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Preference number: 2 (lower is better) Translates to: SERHPKDGKPIPNQDFHIKQAGS*EQISQV Trigger: TACCTGTGATATTTGTTCCCATGAACCTGCTTGTTT...GATATGGAAGTCCTGGTTAGGGATAGGCTTGCCATCCTTGGGATGTCTTTCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| 3UTR CCA 72 bp | GTCCTGGAGTGGAGGGTGGTCCCTCAGGGACTGTCCTaGAGTGGAGGGTGGTTTGAGGATGGTCTCAGAATG | + |
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Preference number: 3 (lower is better) Translates to: VLEWRVVPQGLS*SGGWFEDGLRM Trigger: CATTCTGAGACCATCCTCAAACCACCCTCCACTCCAGGACAGTCCCTGAGGGACCACCCTCCACTCCAGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| 3UTR-3UTR CAA 90 bp | CCATGTTCCTCCATGGCTACAAGTCTCAGAAAGCAGCAGCCCTGTGTGGACTCTGAAATGCCATGTCCCTaGGAGGCTGAGCTGGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: PCSSMATSLRKQQPCVDSEMPCP*EAELAQ Trigger: CTGGGCCAGCTCAGCCTCCAAGGGACATGGCATTTC...AGAGTCCACACAGGGCTGCTGCTTTCTGAGACTTGTAGCCATGGAGGAACATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| 3UTR CCA 72 bp | CAGAACAGCTGTGAGAGGAACCACCATGTTCCTCCATaGCTACAAGTCTCAGAAAGCAGCAGCCCTGTGTGG | + |
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Preference number: 3 (lower is better) Translates to: QNSCERNHHVPP*LQVSESSSPVW Trigger: CCACACAGGGCTGCTGCTTTCTGAGACTTGTAGCCATGGAGGAACATGGTGGTTCCTCTCACAGCTGTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| 3UTR CCA 72 bp | TATCACAGGTATAGTCAGGAAAACCTGAGACTGCTCTaGACTGTACCTTGTGCGTCAGGAAGCTTCTGGGGG | + |
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Preference number: 3 (lower is better) Translates to: YHRYSQENLRLL*TVPCASGSFWG Trigger: CCCCCAGAAGCTTCCTGACGCACAAGGTACAGTCCAGAGCAGTCTCAGGTTTTCCTGACTATACCTGTGATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| 3UTR TCA 72 bp | CTGGCTTTTAAACTCCACTTCTGTGCAGAACAGCTGTaGGAGGAACCACCATGTTCCTCCATGGCTACAAGT | + |
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Preference number: 3 (lower is better) Translates to: LAFKLHFCAEQL*EEPPCSSMATS Trigger: ACTTGTAGCCATGGAGGAACATGGTGGTTCCTCTCACAGCTGTTCTGCACAGAAGTGGAGTTTAAAAGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| 3UTR-3UTR CAA 90 bp | TCTCAGAATTTCTCAGAAAGACATCCCAAGGATGGCAAGCCTATCCCTAACCAGTCCAGAGCTAGAAGTTaGAGTTGTGTATTTACTGTG | + |
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Preference number: 3 (lower is better) Translates to: SQNFSERHPKDGKPIPNQSRARS*SCVFTV Trigger: CACAGTAAATACACAACTCAAACTTCTAGCTCTGGA...CTGGTTAGGGATAGGCTTGCCATCCTTGGGATGTCTTTCTGAGAAATTCTGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| CDS-3UTR GCA 90 bp | GAGTGGAAGGTAGTCCCTCAGGGACTGTCCTGGAGTGGAGGGTGGTCCCTCAGGAGATGGAGTAGGTTGTaGAGACGGAGGCTGCCGGCA | + |
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Preference number: 4 (lower is better) Translates to: EWKVVPQGLSWSGGWSLRRWSRL*RRRLPA Trigger: TGCCGGCAGCCTCCGTCTGCACAACCTACTCCATCT...CCTGAGGGACCACCCTCCACTCCAGGACAGTCCCTGAGGGACTACCTTCCACTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| CDS-3UTR GCA 90 bp | AGAATGAGAGATCAGGATGAAATGCCATGTCCCTTGGAGGCTGAGCTGGCCCAGGTCCCCAACAGGCCATaGTGGGACCCGCCCAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: RMRDQDEMPCPLEAELAQVPNRP*WDPPSG Trigger: CCCACTGGGCGGGTCCCAGCATGGCCTGTTGGGGAC...CTGGGCCAGCTCAGCCTCCAAGGGACATGGCATTTCATCCTGATCTCTCATTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| CDS-3UTR TCA 90 bp | GTGGTCCCTCAGGGACTGTCCTGGAGTGGAGGGTGGTTTGAGGATGGTCTCAGACAGCCATATGGCCAATaGAGAGCCACACCAGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: VVPQGLSWSGGWFEDGLRQPYGQ*RATPAS Trigger: GGAGGCTGGTGTGGCTCTTCATTGGCCATATGGCTG...TCTGAGACCATCCTCAAACCACCCTCCACTCCAGGACAGTCCCTGAGGGACCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| CDS-3UTR GCA 90 bp | CAGGAACATAGCAGCATCCAGGTAGGCATGGTGCAGGAGAAGCTGAGAGTTCTCTGTGCAGACGGAGGCTaGCGGCACAGCTCCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: QEHSSIQVGMVQEKLRVLCADGG*RHSSRL Trigger: CAGCCTGGAGCTGTGCCGGCAGCCTCCGTCTGCACA...GAGAACTCTCAGCTTCTCCTGCACCATGCCTACCTGGATGCTGCTATGTTCCTG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128619.8 |
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| CDS-3UTR GCA 90 bp | GAACATAGCAGCATCCAGGTAGGCATGGTGCAGGAGAAGCTGAGAGTTCTCCTTGTCCCCAACAGGCCATaGTGGGACCCGCCCAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: EHSSIQVGMVQEKLRVLLVPNRP*WDPPSG Trigger: CCCACTGGGCGGGTCCCAGCATGGCCTGTTGGGGAC...AAGGAGAACTCTCAGCTTCTCCTGCACCATGCCTACCTGGATGCTGCTATGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128619.8 |
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| CDS-3UTR GCA 90 bp | CCATGTTCCTCCATGGCTACAAGTCTCAGAAAGCAGCAGCCCTGTGTGGACTCTGCTTGTGGGGAGAGGTaGCGGGCCAAAGTCTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: PCSSMATSLRKQQPCVDSACGER*RAKVSR Trigger: CCGGGAGACTTTGGCCCGGCACCTCTCCCCACAAGC...AGAGTCCACACAGGGCTGCTGCTTTCTGAGACTTGTAGCCATGGAGGAACATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| CDS-3UTR GCA 90 bp | CAGGAACATAGCAGCATCCAGGTAGGCATGGTGCAGGAGAAGCTGAGAGTTCTCCAGCCAGTTGAGCGCTaGCCAGCACCAGAGGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: QEHSSIQVGMVQEKLRVLQPVER*PAPEVL Trigger: GAGGACCTCTGGTGCTGGGCAGCGCTCAACTGGCTG...GAGAACTCTCAGCTTCTCCTGCACCATGCCTACCTGGATGCTGCTATGTTCCTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128619.8 |
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| CDS-3UTR GCA 90 bp | GAACATAGCAGCATCCAGGTAGGCATGGTGCAGGAGAAGCTGAGAGTTCTCCTTGCTTGTGGGGAGAGGTaGCGGGCCAAAGTCTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: EHSSIQVGMVQEKLRVLLACGER*RAKVSR Trigger: CCGGGAGACTTTGGCCCGGCACCTCTCCCCACAAGC...AAGGAGAACTCTCAGCTTCTCCTGCACCATGCCTACCTGGATGCTGCTATGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128619.8 |
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| CDS-3UTR CCA 90 bp | GAACATAGCAGCATCCAGGTAGGCATGGTGCAGGAGAAGCTGAGAGTTCTCCTTGACCATGACCACGCCTaGCGCCCCCAGCACACACCA | + |
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Preference number: 4 (lower is better) Translates to: EHSSIQVGMVQEKLRVLLDHDHA*RPQHTP Trigger: TGGTGTGTGCTGGGGGCGCCAGGCGTGGTCATGGTC...AAGGAGAACTCTCAGCTTCTCCTGCACCATGCCTACCTGGATGCTGCTATGTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128619.8 |
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| CDS-3UTR CCA 90 bp | GAACATAGCAGCATCCAGGTAGGCATGGTGCAGGAGAAGCTGAGAGTTCTCCTTGCGGGGAAGAGGTGGTaGCGTGAGTCCATCCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: EHSSIQVGMVQEKLRVLLAGKRW*RESIQA Trigger: CGCCTGGATGGACTCACGCCACCACCTCTTCCCCGC...AAGGAGAACTCTCAGCTTCTCCTGCACCATGCCTACCTGGATGCTGCTATGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128619.8 |
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| CDS-3UTR CCA 90 bp | CAGGAACATAGCAGCATCCAGGTAGGCATGGTGCAGGAGAAGCTGAGAGTTCTCGCAGCGGGGAAGAGGTaGTGGCGTGAGTCCATCCAG | + |
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Preference number: 4 (lower is better) Translates to: QEHSSIQVGMVQEKLRVLAAGKR*WRESIQ Trigger: CTGGATGGACTCACGCCACCACCTCTTCCCCGCTGC...GAGAACTCTCAGCTTCTCCTGCACCATGCCTACCTGGATGCTGCTATGTTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128619.8 |
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| CDS-3UTR CCA 90 bp | GAACATAGCAGCATCCAGGTAGGCATGGTGCAGGAGAAGCTGAGAGTTCTCCTTCCCAACAGGCCATGCTaGGACCCGCCCAGTGGGATG | + |
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Preference number: 4 (lower is better) Translates to: EHSSIQVGMVQEKLRVLLPNRPC*DPPSGM Trigger: CATCCCACTGGGCGGGTCCCAGCATGGCCTGTTGGG...AAGGAGAACTCTCAGCTTCTCCTGCACCATGCCTACCTGGATGCTGCTATGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128619.8 |
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| CDS-3UTR CCA 90 bp | CCATGTTCCTCCATGGCTACAAGTCTCAGAAAGCAGCAGCCCTGTGTGGACTCTGCGTGCAGTCGATGGTaGGCTTGTGGGGAGAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: PCSSMATSLRKQQPCVDSACSRW*ACGERC Trigger: GCACCTCTCCCCACAAGCCCACCATCGACTGCACGC...AGAGTCCACACAGGGCTGCTGCTTTCTGAGACTTGTAGCCATGGAGGAACATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| CDS-3UTR CCA 90 bp | CAGGAACATAGCAGCATCCAGGTAGGCATGGTGCAGGAGAAGCTGAGAGTTCTCGCGTGCAGTCGATGGTaGGCTTGTGGGGAGAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: QEHSSIQVGMVQEKLRVLACSRW*ACGERC Trigger: GCACCTCTCCCCACAAGCCCACCATCGACTGCACGC...GAGAACTCTCAGCTTCTCCTGCACCATGCCTACCTGGATGCTGCTATGTTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128619.8 |
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| CDS-3UTR TCA 90 bp | CAGGAACATAGCAGCATCCAGGTAGGCATGGTGCAGGAGAAGCTGAGAGTTCTCAGCACGGATCGGAACTaGGCCACGCAGAACGCGATG | + |
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Preference number: 4 (lower is better) Translates to: QEHSSIQVGMVQEKLRVLSTDRN*ATQNAM Trigger: CATCGCGTTCTGCGTGGCTCAGTTCCGATCCGTGCT...GAGAACTCTCAGCTTCTCCTGCACCATGCCTACCTGGATGCTGCTATGTTCCTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128619.8 |
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| CDS-3UTR TCA 90 bp | CAGGAACATAGCAGCATCCAGGTAGGCATGGTGCAGGAGAAGCTGAGAGTTCTCGGCACAGCTCCAGGCTaGAGCTGGTGTAGTACAGGC | + |
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Preference number: 4 (lower is better) Translates to: QEHSSIQVGMVQEKLRVLGTAPG*SWCSTG Trigger: GCCTGTACTACACCAGCTTCAGCCTGGAGCTGTGCC...GAGAACTCTCAGCTTCTCCTGCACCATGCCTACCTGGATGCTGCTATGTTCCTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128619.8 |
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| CDS-3UTR TCA 90 bp | GAACATAGCAGCATCCAGGTAGGCATGGTGCAGGAGAAGCTGAGAGTTCTCCTTGTCCATCCAGGCGCATaGGCAGAGCCGGGACACCAA | + |
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Preference number: 4 (lower is better) Translates to: EHSSIQVGMVQEKLRVLLVHPGA*AEPGHQ Trigger: TTGGTGTCCCGGCTCTGCTCATGCGCCTGGATGGAC...AAGGAGAACTCTCAGCTTCTCCTGCACCATGCCTACCTGGATGCTGCTATGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128619.8 |
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| CDS-3UTR CCA 90 bp | GGGTGGTTTGAGGATGGTCTCAGAATGAGAGATCAGGATGAAATGCCATGTCCCCCCAACAGGCCATGCTaGGACCCGCCCAGTGGGATG | + |
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Preference number: 4 (lower is better) Translates to: GWFEDGLRMRDQDEMPCPPNRPC*DPPSGM Trigger: CATCCCACTGGGCGGGTCCCAGCATGGCCTGTTGGG...GGGACATGGCATTTCATCCTGATCTCTCATTCTGAGACCATCCTCAAACCACCC 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| CDS-3UTR TCA 90 bp | GCTGTGAGAGGAACCACCATGTTCCTCCATGGCTACAAGTCTCAGAAAGCAGCAAGCACGGATCGGAACTaGGCCACGCAGAACGCGATG | + |
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Preference number: 4 (lower is better) Translates to: AVRGTTMFLHGYKSQKAASTDRN*ATQNAM Trigger: CATCGCGTTCTGCGTGGCTCAGTTCCGATCCGTGCT...TGCTGCTTTCTGAGACTTGTAGCCATGGAGGAACATGGTGGTTCCTCTCACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| CDS-3UTR GCA 90 bp | AGTGGAGGGTGGTTTGAGGATGGTCTCAGAATGAGAGATCAGGATGAAATGCCATGTGCAGACGGAGGCTaGCGGCACAGCTCCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SGGWFEDGLRMRDQDEMPCADGG*RHSSRL Trigger: CAGCCTGGAGCTGTGCCGGCAGCCTCCGTCTGCACA...TGGCATTTCATCCTGATCTCTCATTCTGAGACCATCCTCAAACCACCCTCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| CDS-3UTR CCA 90 bp | TCTCAGAAAGACATCCCAAGGATGGCAAGCCTATCCCTAACCAGGACTTCCATAGACCATGACCACGCCTaGCGCCCCCAGCACACACCA | + |
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Preference number: 4 (lower is better) Translates to: SQKDIPRMASLSLTRTSIDHDHA*RPQHTP Trigger: TGGTGTGTGCTGGGGGCGCCAGGCGTGGTCATGGTC...TATGGAAGTCCTGGTTAGGGATAGGCTTGCCATCCTTGGGATGTCTTTCTGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| CDS-3UTR CCA 90 bp | CAGGAACATAGCAGCATCCAGGTAGGCATGGTGCAGGAGAAGCTGAGAGTTCTCGACGACCCAGGCCCTTaGCTACAATGCAGAGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: QEHSSIQVGMVQEKLRVLDDPGP*LQCRGC Trigger: ACAGCCTCTGCATTGTAGCCAAGGGCCTGGGTCGTC...GAGAACTCTCAGCTTCTCCTGCACCATGCCTACCTGGATGCTGCTATGTTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128619.8 |
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| CDS-3UTR CCA 90 bp | ACAGCTGTGAGAGGAACCACCATGTTCCTCCATGGCTACAAGTCTCAGAAAGCAGCAGCGGGGAAGAGGTaGTGGCGTGAGTCCATCCAG | + |
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Preference number: 4 (lower is better) Translates to: TAVRGTTMFLHGYKSQKAAAGKR*WRESIQ Trigger: CTGGATGGACTCACGCCACCACCTCTTCCCCGCTGC...TGCTTTCTGAGACTTGTAGCCATGGAGGAACATGGTGGTTCCTCTCACAGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| CDS-3UTR TCA 90 bp | GAACATAGCAGCATCCAGGTAGGCATGGTGCAGGAGAAGCTGAGAGTTCTCCTTCAGCCATATGGCCAATaGAGAGCCACACCAGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: EHSSIQVGMVQEKLRVLLQPYGQ*RATPAS Trigger: GGAGGCTGGTGTGGCTCTTCATTGGCCATATGGCTG...AAGGAGAACTCTCAGCTTCTCCTGCACCATGCCTACCTGGATGCTGCTATGTTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128619.8 |
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| CDS-3UTR GCA 90 bp | GAACATAGCAGCATCCAGGTAGGCATGGTGCAGGAGAAGCTGAGAGTTCTCCTTAGATGGAGTAGGTTGTaGAGACGGAGGCTGCCGGCA | + |
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Preference number: 4 (lower is better) Translates to: EHSSIQVGMVQEKLRVLLRWSRL*RRRLPA Trigger: TGCCGGCAGCCTCCGTCTGCACAACCTACTCCATCT...AAGGAGAACTCTCAGCTTCTCCTGCACCATGCCTACCTGGATGCTGCTATGTTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128619.8 |
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| CDS-3UTR CCA 90 bp | TCTCAGAATTTCTCAGAAAGACATCCCAAGGATGGCAAGCCTATCCCTAACCAGGCGGGGAAGAGGTGGTaGCGTGAGTCCATCCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: SQNFSERHPKDGKPIPNQAGKRW*RESIQA Trigger: CGCCTGGATGGACTCACGCCACCACCTCTTCCCCGC...CTGGTTAGGGATAGGCTTGCCATCCTTGGGATGTCTTTCTGAGAAATTCTGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| CDS-3UTR CCA 90 bp | CCATGTTCCTCCATGGCTACAAGTCTCAGAAAGCAGCAGCCCTGTGTGGACTCTCTGGGACCCGCCCAGTaGGATGTACACATACCTGAT | + |
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Preference number: 4 (lower is better) Translates to: PCSSMATSLRKQQPCVDSLGPAQ*DVHIPD Trigger: ATCAGGTATGTGTACATCCCACTGGGCGGGTCCCAG...AGAGTCCACACAGGGCTGCTGCTTTCTGAGACTTGTAGCCATGGAGGAACATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| 3UTR CAA 72 bp | TCATGGGACCTTGGGATGTCACTCTCCCCAGAGGCCTaGCGCAACACCACCTGCATGTGGACATCTTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: SWDLGMSLSPEA*RNTTCMWTSYS Trigger: AGAATAAGATGTCCACATGCAGGTGGTGTTGCGCAAGGCCTCTGGGGAGAGTGACATCCCAAGGTCCCATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
||
| CDS-3UTR TCA 90 bp | AGTGGAGGGTGGTTTGAGGATGGTCTCAGAATGAGAGATCAGGATGAAATGCCAGGCACAGCTCCAGGCTaGAGCTGGTGTAGTACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGGWFEDGLRMRDQDEMPGTAPG*SWCSTG Trigger: GCCTGTACTACACCAGCTTCAGCCTGGAGCTGTGCC...TGGCATTTCATCCTGATCTCTCATTCTGAGACCATCCTCAAACCACCCTCCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
||
| CDS-3UTR TCA 90 bp | TCTCAGAATTTCTCAGAAAGACATCCCAAGGATGGCAAGCCTATCCCTAACCAGGTCCATCCAGGCGCATaGGCAGAGCCGGGACACCAA | + |
|
Preference number: 4 (lower is better) Translates to: SQNFSERHPKDGKPIPNQVHPGA*AEPGHQ Trigger: TTGGTGTCCCGGCTCTGCTCATGCGCCTGGATGGAC...CTGGTTAGGGATAGGCTTGCCATCCTTGGGATGTCTTTCTGAGAAATTCTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
||
| CDS-3UTR GCA 90 bp | GAACATAGCAGCATCCAGGTAGGCATGGTGCAGGAGAAGCTGAGAGTTCTCCTTATGCAGAGGCTGTGCTaGAGAGAGTTGAGCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EHSSIQVGMVQEKLRVLLMQRLC*RELSSG Trigger: GCCAGAGCTCAACTCTCTGCAGCACAGCCTCTGCAT...AAGGAGAACTCTCAGCTTCTCCTGCACCATGCCTACCTGGATGCTGCTATGTTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128619.8 |
||
| CDS-3UTR GCA 90 bp | TCTCAGAATTTCTCAGAAAGACATCCCAAGGATGGCAAGCCTATCCCTAACCAGCAGCCAGTTGAGCGCTaGCCAGCACCAGAGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SQNFSERHPKDGKPIPNQQPVER*PAPEVL Trigger: GAGGACCTCTGGTGCTGGGCAGCGCTCAACTGGCTG...CTGGTTAGGGATAGGCTTGCCATCCTTGGGATGTCTTTCTGAGAAATTCTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
||
| CDS-3UTR CCA 90 bp | GAACATAGCAGCATCCAGGTAGGCATGGTGCAGGAGAAGCTGAGAGTTCTCCTTCTGGGACCCGCCCAGTaGGATGTACACATACCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: EHSSIQVGMVQEKLRVLLLGPAQ*DVHIPD Trigger: ATCAGGTATGTGTACATCCCACTGGGCGGGTCCCAG...AAGGAGAACTCTCAGCTTCTCCTGCACCATGCCTACCTGGATGCTGCTATGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128619.8 |
||
| CDS-3UTR GCA 90 bp | CCATGTTCCTCCATGGCTACAAGTCTCAGAAAGCAGCAGCCCTGTGTGGACTCTGAGTTGAGCTCTGGCTaGTGCATCTGTCTGAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PCSSMATSLRKQQPCVDSELSSG*CICLKN Trigger: GTTCTTCAGACAGATGCAGCAGCCAGAGCTCAACTC...AGAGTCCACACAGGGCTGCTGCTTTCTGAGACTTGTAGCCATGGAGGAACATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
||
| CDS-3UTR GCA 90 bp | CAGGAACATAGCAGCATCCAGGTAGGCATGGTGCAGGAGAAGCTGAGAGTTCTCGAGTTGAGCTCTGGCTaGTGCATCTGTCTGAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QEHSSIQVGMVQEKLRVLELSSG*CICLKN Trigger: GTTCTTCAGACAGATGCAGCAGCCAGAGCTCAACTC...GAGAACTCTCAGCTTCTCCTGCACCATGCCTACCTGGATGCTGCTATGTTCCTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128619.8 |
||
| CDS-3UTR GCA 90 bp | CAGGAACATAGCAGCATCCAGGTAGGCATGGTGCAGGAGAAGCTGAGAGTTCTCACAATGCAGAGGCTGTaGTGCAGAGAGTTGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QEHSSIQVGMVQEKLRVLTMQRL*CRELSS Trigger: AGAGCTCAACTCTCTGCAGCACAGCCTCTGCATTGT...GAGAACTCTCAGCTTCTCCTGCACCATGCCTACCTGGATGCTGCTATGTTCCTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128619.8 |
||
| CDS-3UTR GCA 90 bp | CAGGAACATAGCAGCATCCAGGTAGGCATGGTGCAGGAGAAGCTGAGAGTTCTCCATCTGAAGGCTGCTTaGAGGAAGATCCTGTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QEHSSIQVGMVQEKLRVLHLKAA*RKILFQ Trigger: CTGGAACAGGATCTTCCTGCAAGCAGCCTTCAGATG...GAGAACTCTCAGCTTCTCCTGCACCATGCCTACCTGGATGCTGCTATGTTCCTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128619.8 |
||
| CDS-3UTR TCA 90 bp | CCAGAGGCCTTGCGCAACACCACCTGCATGTGGACATCTTATTCTCTGGCTTTTGGGCATGCATGTACATaGGGTGTACCATCAGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PEALRNTTCMWTSYSLAFGHACT*GVPSVQ Trigger: CTGAACTGATGGTACACCTCATGTACATGCATGCCC...AAAAGCCAGAGAATAAGATGTCCACATGCAGGTGGTGTTGCGCAAGGCCTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
||
| CDS-3UTR TCA 90 bp | GAACATAGCAGCATCCAGGTAGGCATGGTGCAGGAGAAGCTGAGAGTTCTCCTTGGGCATGCATGTACATaGGGTGTACCATCAGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EHSSIQVGMVQEKLRVLLGHACT*GVPSVQ Trigger: CTGAACTGATGGTACACCTCATGTACATGCATGCCC...AAGGAGAACTCTCAGCTTCTCCTGCACCATGCCTACCTGGATGCTGCTATGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128619.8 |
||
| CDS-3UTR CCA 90 bp | GAACATAGCAGCATCCAGGTAGGCATGGTGCAGGAGAAGCTGAGAGTTCTCCTTCAGAGAGTTGAGCTCTaGCTGCTGCATCTGTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: EHSSIQVGMVQEKLRVLLQRVEL*LLHLSE Trigger: TTCAGACAGATGCAGCAGCCAGAGCTCAACTCTCTG...AAGGAGAACTCTCAGCTTCTCCTGCACCATGCCTACCTGGATGCTGCTATGTTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128619.8 |
||
| CDS-3UTR TCA 90 bp | GCTGTGAGAGGAACCACCATGTTCCTCCATGGCTACAAGTCTCAGAAAGCAGCAACATTCCATAGACCATaGCAATCCAGGGTCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AVRGTTMFLHGYKSQKAATFHRP*QSRVCA Trigger: AGCACAGACCCTGGATTGTCATGGTCTATGGAATGT...TGCTGCTTTCTGAGACTTGTAGCCATGGAGGAACATGGTGGTTCCTCTCACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
||
| CDS-3UTR GCA 90 bp | TCTCAGAATTTCTCAGAAAGACATCCCAAGGATGGCAAGCCTATCCCTAACCAGATGCAGAGGCTGTGCTaGAGAGAGTTGAGCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SQNFSERHPKDGKPIPNQMQRLC*RELSSG Trigger: GCCAGAGCTCAACTCTCTGCAGCACAGCCTCTGCAT...CTGGTTAGGGATAGGCTTGCCATCCTTGGGATGTCTTTCTGAGAAATTCTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
||
| CDS-3UTR GCA 90 bp | GAACATAGCAGCATCCAGGTAGGCATGGTGCAGGAGAAGCTGAGAGTTCTCCTTGAACGCAAACGTTGTTaGAGTAGAAAGCAGTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: EHSSIQVGMVQEKLRVLLERKRC*SRKQCP Trigger: GGGACACTGCTTTCTACTGCAACAACGTTTGCGTTC...AAGGAGAACTCTCAGCTTCTCCTGCACCATGCCTACCTGGATGCTGCTATGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128619.8 |
||
| CDS-3UTR CCA 90 bp | GGGTGGTTTGAGGATGGTCTCAGAATGAGAGATCAGGATGAAATGCCATGTCCCTTTGCAGCCTTAGGGTaGAGAGCAGAAGGAGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GWFEDGLRMRDQDEMPCPFAALG*RAEGEN Trigger: GTTCTCTCCTTCTGCTCTCCACCCTAAGGCTGCAAA...GGGACATGGCATTTCATCCTGATCTCTCATTCTGAGACCATCCTCAAACCACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
||
| CDS-3UTR CCA 90 bp | GGGTGGTTTGAGGATGGTCTCAGAATGAGAGATCAGGATGAAATGCCATGTCCCCAGAGAGTTGAGCTCTaGCTGCTGCATCTGTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GWFEDGLRMRDQDEMPCPQRVEL*LLHLSE Trigger: TTCAGACAGATGCAGCAGCCAGAGCTCAACTCTCTG...GGGACATGGCATTTCATCCTGATCTCTCATTCTGAGACCATCCTCAAACCACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
||
| CDS-3UTR CCA 90 bp | ACAAGTCTCAGAAAGCAGCAGCCCTGTGTGGACTCTCCAATAAAGTTCAAGTTAGACGACCCAGGCCCTTaGCTACAATGCAGAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TSLRKQQPCVDSPIKFKLDDPGP*LQCRGC Trigger: ACAGCCTCTGCATTGTAGCCAAGGGCCTGGGTCGTC...TAACTTGAACTTTATTGGAGAGTCCACACAGGGCTGCTGCTTTCTGAGACTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
||
| CDS-3UTR TCA 90 bp | GAACATAGCAGCATCCAGGTAGGCATGGTGCAGGAGAAGCTGAGAGTTCTCCTTTCCAGCTCAAATTCTTaGTCCAGTTCCTCTTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: EHSSIQVGMVQEKLRVLLSSSNS*SSSSSC Trigger: GCATGAAGAGGAACTGGATCAAGAATTTGAGCTGGA...AAGGAGAACTCTCAGCTTCTCCTGCACCATGCCTACCTGGATGCTGCTATGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128619.8 |
||
| CDS-3UTR GCA 90 bp | GGGAACAAATATCACAGGTATAGTCAGGAAAACCTGAGACTGCTCTGGACTGTAACCCATGGCCACCCTTaGAGGAAGATCCTGTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GNKYHRYSQENLRLLWTVTHGHP*RKILFQ Trigger: CTGGAACAGGATCTTCCTGCAAGGGTGGCCATGGGT...TACAGTCCAGAGCAGTCTCAGGTTTTCCTGACTATACCTGTGATATTTGTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
||
| CDS-3UTR GCA 90 bp | TCTCAGAATTTCTCAGAAAGACATCCCAAGGATGGCAAGCCTATCCCTAACCAGACAATGCAGAGGCTGTaGTGCAGAGAGTTGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SQNFSERHPKDGKPIPNQTMQRL*CRELSS Trigger: AGAGCTCAACTCTCTGCAGCACAGCCTCTGCATTGT...CTGGTTAGGGATAGGCTTGCCATCCTTGGGATGTCTTTCTGAGAAATTCTGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
||
| CDS-3UTR GCA 90 bp | TCTCAGAAAGACATCCCAAGGATGGCAAGCCTATCCCTAACCAGGACTTCCATAGAACGCAAACGTTGTTaGAGTAGAAAGCAGTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SQKDIPRMASLSLTRTSIERKRC*SRKQCP Trigger: GGGACACTGCTTTCTACTGCAACAACGTTTGCGTTC...TATGGAAGTCCTGGTTAGGGATAGGCTTGCCATCCTTGGGATGTCTTTCTGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
||
| CDS-3UTR CCA 90 bp | CAGGAACATAGCAGCATCCAGGTAGGCATGGTGCAGGAGAAGCTGAGAGTTCTCCCTCTTCATGCTCTCTaGAGACTTTGTAAACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QEHSSIQVGMVQEKLRVLPLHAL*RLCKLH Trigger: ATGAAGTTTACAAAGTCTCCAGAGAGCATGAAGAGG...GAGAACTCTCAGCTTCTCCTGCACCATGCCTACCTGGATGCTGCTATGTTCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128619.8 |
||
| CDS-3UTR GCA 90 bp | ACAAGTCTCAGAAAGCAGCAGCCCTGTGTGGACTCTCCAATAAAGTTCAAGTTATTGAGCTCTGGCTGCTaGATCTGTCTGAAGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: TSLRKQQPCVDSPIKFKLLSSGC*ICLKNS Trigger: GGAGTTCTTCAGACAGATGCAGCAGCCAGAGCTCAA...TAACTTGAACTTTATTGGAGAGTCCACACAGGGCTGCTGCTTTCTGAGACTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
||
| CDS-3UTR CCA 90 bp | GCTGTGAGAGGAACCACCATGTTCCTCCATGGCTACAAGTCTCAGAAAGCAGCACCTCTTCATGCTCTCTaGAGACTTTGTAAACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AVRGTTMFLHGYKSQKAAPLHAL*RLCKLH Trigger: ATGAAGTTTACAAAGTCTCCAGAGAGCATGAAGAGG...TGCTGCTTTCTGAGACTTGTAGCCATGGAGGAACATGGTGGTTCCTCTCACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
||
| CDS-3UTR TCA 90 bp | TTGCGCAACACCACCTGCATGTGGACATCTTATTCTCTGGCTTTTAAACTCCACTCCAGCTCAAATTCTTaGTCCAGTTCCTCTTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: LRNTTCMWTSYSLAFKLHSSSNS*SSSSSC Trigger: GCATGAAGAGGAACTGGATCAAGAATTTGAGCTGGA...GTGGAGTTTAAAAGCCAGAGAATAAGATGTCCACATGCAGGTGGTGTTGCGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
||
| 3UTR CAA 72 bp | ATTGAGGCTAGCTTACAGGTTCAGAAGTTCAGTCCATaGTCATCAAGGCAGGAACATAGCAGCATCCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: IEASLQVQKFSP*SSRQEHSSIQV Trigger: TACCTGGATGCTGCTATGTTCCTGCCTTGATGACAATGGACTGAACTTCTGAACCTGTAAGCTAGCCTCAAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128619.8 |
||
| CDS GCA 90 bp | GCGGCAAGCAGAGCGTGCAGTCGATGGTGGGCTTGTGGGGAGAGGTaGCGGGCCAAAGTCTCCCGGACACAGGGTGTCTCTAGCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: AASRACSRWWACGER*RAKVSRTQGVSSSL Trigger: GAGGCTGCTAGAGACACCCTGTGTCCGGGAGACTTTGGCCCGGCACCTCTCCCCACAAGCCCACCATCGACTGCACGCTCTGCTTGCCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
||
| CDS CCA 90 bp | AGCATGGAGGTAGAGCAGGCGGCAAGCAGAGCGTGCAGTCGATGGTaGGCTTGTGGGGAGAGGTGCCGGGCCAAAGTCTCCCGGACACAG | + |
|
Preference number: 5 (lower is better) Translates to: SMEVEQAASRACSRW*ACGERCRAKVSRTQ Trigger: CTGTGTCCGGGAGACTTTGGCCCGGCACCTCTCCCCACAAGCCCACCATCGACTGCACGCTCTGCTTGCCGCCTGCTCTACCTCCATGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
||
| CDS CCA 90 bp | ATGAGCATGGAGGTAGAGCAGGCGGCAAGCAGAGCGTGCAGTCGATaGTGGGCTTGTGGGGAGAGGTGCCGGGCCAAAGTCTCCCGGACA | + |
|
Preference number: 5 (lower is better) Translates to: MSMEVEQAASRACSR*WACGERCRAKVSRT Trigger: TGTCCGGGAGACTTTGGCCCGGCACCTCTCCCCACAAGCCCACCATCGACTGCACGCTCTGCTTGCCGCCTGCTCTACCTCCATGCTCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
||
| CDS GCA 90 bp | CCTCCGGACCCCACTCTCCACAGTGACTCCCAGCCAGTTGAGCGCTaGCCAGCACCAGAGGTCCTCATAGCTACCATGCCAGTAGCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: PPDPTLHSDSQPVER*PAPEVLIATMPVAH Trigger: GTGAGCTACTGGCATGGTAGCTATGAGGACCTCTGGTGCTGGGCAGCGCTCAACTGGCTGGGAGTCACTGTGGAGAGTGGGGTCCGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
||
| CDS CCA 90 bp | CACGCAGAACGCGATGGTGCTGTGGAGAAGGACCATGACCACGCCTaGCGCCCCCAGCACACACCAGCAGGCCCACATTCCATAGACCAT | + |
|
Preference number: 5 (lower is better) Translates to: HAERDGAVEKDHDHA*RPQHTPAGPHSIDH Trigger: ATGGTCTATGGAATGTGGGCCTGCTGGTGTGTGCTGGGGGCGCCAGGCGTGGTCATGGTCCTTCTCCACAGCACCATCGCGTTCTGCGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
||
| CDS CCA 90 bp | CATCCCGGTAAAACTGAACATGGTGCTCACGCAGCGGGGAAGAGGTaGTGGCGTGAGTCCATCCAGGCGCATGAGCAGAGCCGGGACACC | + |
|
Preference number: 5 (lower is better) Translates to: HPGKTEHGAHAAGKR*WRESIQAHEQSRDT Trigger: GGTGTCCCGGCTCTGCTCATGCGCCTGGATGGACTCACGCCACCACCTCTTCCCCGCTGCGTGAGCACCATGTTCAGTTTTACCGGGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
||
| CDS GCA 90 bp | TTGAAGAGGATGAGCATGGAGGTAGAGCAGGCGGCAAGCAGAGCGTaGAGTCGATGGTGGGCTTGTGGGGAGAGGTGCCGGGCCAAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LKRMSMEVEQAASRA*SRWWACGERCRAKV Trigger: GACTTTGGCCCGGCACCTCTCCCCACAAGCCCACCATCGACTGCACGCTCTGCTTGCCGCCTGCTCTACCTCCATGCTCATCCTCTTCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
||
| CDS CCA 90 bp | CCCGGTAAAACTGAACATGGTGCTCACGCAGCGGGGAAGAGGTGGTaGCGTGAGTCCATCCAGGCGCATGAGCAGAGCCGGGACACCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PGKTEHGAHAAGKRW*RESIQAHEQSRDTK Trigger: TTTGGTGTCCCGGCTCTGCTCATGCGCCTGGATGGACTCACGCCACCACCTCTTCCCCGCTGCGTGAGCACCATGTTCAGTTTTACCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
||
| CDS-3UTR CAA 90 bp | CAGGAACATAGCAGCATCCAGGTAGGCATGGTGCAGGAGAAGCTGAGAGTTCTCCAGTCGATGGTGGGCTaGTGGGGAGAGGTGCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QEHSSIQVGMVQEKLRVLQSMVG*WGEVPG Trigger: GCCCGGCACCTCTCCCCACAAGCCCACCATCGACTG...GAGAACTCTCAGCTTCTCCTGCACCATGCCTACCTGGATGCTGCTATGTTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128619.8 |
||
| CDS-3UTR CAA 90 bp | CAGGAACATAGCAGCATCCAGGTAGGCATGGTGCAGGAGAAGCTGAGAGTTCTCGTGACTCCCAGCCAGTaGAGCGCTGCCCAGCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: QEHSSIQVGMVQEKLRVLVTPSQ*SAAQHQ Trigger: CTGGTGCTGGGCAGCGCTCAACTGGCTGGGAGTCAC...GAGAACTCTCAGCTTCTCCTGCACCATGCCTACCTGGATGCTGCTATGTTCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128619.8 |
||
| CDS GCA 90 bp | CAGCAGAGCAGACGACCCAGGCCCTTGGCTACAATGCAGAGGCTGTaGTGCAGAGAGTTGAGCTCTGGCTGCTGCATCTGTCTGAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: QQSRRPRPLATMQRL*CRELSSGCCICLKN Trigger: GTTCTTCAGACAGATGCAGCAGCCAGAGCTCAACTCTCTGCAGCACAGCCTCTGCATTGTAGCCAAGGGCCTGGGTCGTCTGCTCTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
||
| CDS-3UTR CAA 90 bp | GAGTGGAAGGTAGTCCCTCAGGGACTGTCCTGGAGTGGAGGGTGGTCCCTCAGGGTAGGTTTTCCCAACTaGAATTCCCCCGAGGAACAC | + |
|
Preference number: 5 (lower is better) Translates to: EWKVVPQGLSWSGGWSLRVGFPN*NSPEEH Trigger: GTGTTCCTCGGGGGAATTCAAGTTGGGAAAACCTAC...CCTGAGGGACCACCCTCCACTCCAGGACAGTCCCTGAGGGACTACCTTCCACTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
||
| CDS GCA 90 bp | GTCCTCATAGCTACCATGCCAGTAGCTCACGAACGCAAACGTTGTTaGAGTAGAAAGCAGTGTCCCCAACAGGCCATGCTGGGACCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: VLIATMPVAHERKRC*SRKQCPQQAMLGPA Trigger: GGCGGGTCCCAGCATGGCCTGTTGGGGACACTGCTTTCTACTGCAACAACGTTTGCGTTCGTGAGCTACTGGCATGGTAGCTATGAGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
||
| CDS GCA 90 bp | TTGGCTACAATGCAGAGGCTGTGCTGCAGAGAGTTGAGCTCTGGCTaGTGCATCTGTCTGAAGAACTCCGGGAAGTTAAGGATGGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: LATMQRLCCRELSSG*CICLKNSGKLRMGP Trigger: CGGGCCCATCCTTAACTTCCCGGAGTTCTTCAGACAGATGCAGCAGCCAGAGCTCAACTCTCTGCAGCACAGCCTCTGCATTGTAGCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
||
| CDS-3UTR CAA 90 bp | GAACATAGCAGCATCCAGGTAGGCATGGTGCAGGAGAAGCTGAGAGTTCTCCTTAGACGACCCAGGCCCTaGGCTACAATGCAGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EHSSIQVGMVQEKLRVLLRRPRP*ATMQRL Trigger: CAGCCTCTGCATTGTAGCCAAGGGCCTGGGTCGTCT...AAGGAGAACTCTCAGCTTCTCCTGCACCATGCCTACCTGGATGCTGCTATGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128619.8 |
||
| CDS-3UTR CAA 90 bp | TTGCGCAACACCACCTGCATGTGGACATCTTATTCTCTGGCTTTTAAACTCCACCAGTCGATGGTGGGCTaGTGGGGAGAGGTGCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LRNTTCMWTSYSLAFKLHQSMVG*WGEVPG Trigger: GCCCGGCACCTCTCCCCACAAGCCCACCATCGACTG...GTGGAGTTTAAAAGCCAGAGAATAAGATGTCCACATGCAGGTGGTGTTGCGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
||
| CDS-3UTR CAA 90 bp | GGGTGGTTTGAGGATGGTCTCAGAATGAGAGATCAGGATGAAATGCCATGTCCCAGACGACCCAGGCCCTaGGCTACAATGCAGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GWFEDGLRMRDQDEMPCPRRPRP*ATMQRL Trigger: CAGCCTCTGCATTGTAGCCAAGGGCCTGGGTCGTCT...GGGACATGGCATTTCATCCTGATCTCTCATTCTGAGACCATCCTCAAACCACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
||
| CDS-3UTR CAA 90 bp | CAGGAACATAGCAGCATCCAGGTAGGCATGGTGCAGGAGAAGCTGAGAGTTCTCCCGAGGAACACCAGGTaGAAGAGGATGAGCATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QEHSSIQVGMVQEKLRVLPRNTR*KRMSME Trigger: CTCCATGCTCATCCTCTTCAACCTGGTGTTCCTCGG...GAGAACTCTCAGCTTCTCCTGCACCATGCCTACCTGGATGCTGCTATGTTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128619.8 |
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| CDS TCA 90 bp | ATGACAATCCAGGGTCTGTGCTTCTTTGTGAGTAACGTGGCCAACTaGGACACAGCCATATGGCCAATGAAGAGCCACACCAGCCTCCGC | + |
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Preference number: 5 (lower is better) Translates to: MTIQGLCFFVSNVAN*DTAIWPMKSHTSLR Trigger: GCGGAGGCTGGTGTGGCTCTTCATTGGCCATATGGCTGTGTCTCAGTTGGCCACGTTACTCACAAAGAAGCACAGACCCTGGATTGTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
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| CDS-3UTR CAA 90 bp | GGGTGGTTTGAGGATGGTCTCAGAATGAGAGATCAGGATGAAATGCCATGTCCCCTGTGCTGCAGAGAGTaGAGCTCTGGCTGCTGCATC | + |
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Preference number: 5 (lower is better) Translates to: GWFEDGLRMRDQDEMPCPLCCRE*SSGCCI Trigger: GATGCAGCAGCCAGAGCTCAACTCTCTGCAGCACAG...GGGACATGGCATTTCATCCTGATCTCTCATTCTGAGACCATCCTCAAACCACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| CDS-3UTR CAA 90 bp | ACAAGTCTCAGAAAGCAGCAGCCCTGTGTGGACTCTCCAATAAAGTTCAAGTTAGTGACTCCCAGCCAGTaGAGCGCTGCCCAGCACCAG | + |
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Preference number: 5 (lower is better) Translates to: TSLRKQQPCVDSPIKFKLVTPSQ*SAAQHQ Trigger: CTGGTGCTGGGCAGCGCTCAACTGGCTGGGAGTCAC...TAACTTGAACTTTATTGGAGAGTCCACACAGGGCTGCTGCTTTCTGAGACTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| CDS-3UTR CAA 90 bp | CAGGAACATAGCAGCATCCAGGTAGGCATGGTGCAGGAGAAGCTGAGAGTTCTCGTAGGTTTTCCCAACTaGAATTCCCCCGAGGAACAC | + |
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Preference number: 5 (lower is better) Translates to: QEHSSIQVGMVQEKLRVLVGFPN*NSPEEH Trigger: GTGTTCCTCGGGGGAATTCAAGTTGGGAAAACCTAC...GAGAACTCTCAGCTTCTCCTGCACCATGCCTACCTGGATGCTGCTATGTTCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128619.8 |
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| CDS GCA 90 bp | AACGCAAACGTTGTTGCAGTAGAAAGCAGTGTCCCCAACAGGCCATaGTGGGACCCGCCCAGTGGGATGTACACATACCTGATTAAGAAA | + |
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Preference number: 5 (lower is better) Translates to: NANVVAVESSVPNRP*WDPPSGMYTYLIKK Trigger: TTTCTTAATCAGGTATGTGTACATCCCACTGGGCGGGTCCCAGCATGGCCTGTTGGGGACACTGCTTTCTACTGCAACAACGTTTGCGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
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| CDS CCA 90 bp | GCAAACGTTGTTGCAGTAGAAAGCAGTGTCCCCAACAGGCCATGCTaGGACCCGCCCAGTGGGATGTACACATACCTGATTAAGAAATTG | + |
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Preference number: 5 (lower is better) Translates to: ANVVAVESSVPNRPC*DPPSGMYTYLIKKL Trigger: CAATTTCTTAATCAGGTATGTGTACATCCCACTGGGCGGGTCCCAGCATGGCCTGTTGGGGACACTGCTTTCTACTGCAACAACGTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
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| CDS CCA 90 bp | CAAAGCAAGCTGAGAGAAAAGCAGGGCTCCAAAGACAGGTCTCTGTaGCCAGAAGATGTCCAGGCTCAGTTCTTGCAGGAAGATCCTGTT | + |
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Preference number: 5 (lower is better) Translates to: QSKLREKQGSKDRSL*PEDVQAQFLQEDPV Trigger: AACAGGATCTTCCTGCAAGAACTGAGCCTGGACATCTTCTGGCCACAGAGACCTGTCTTTGGAGCCCTGCTTTTCTCTCAGCTTGCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192585.2 |
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| CDS-3UTR CAA 90 bp | TCAGAAAGACATCCCAAGGATGGCAAGCCTATCCCTAACCAGGACTTCCATATCCCGAGGAACACCAGGTaGAAGAGGATGAGCATGGAG | + |
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Preference number: 5 (lower is better) Translates to: SERHPKDGKPIPNQDFHIPRNTR*KRMSME Trigger: CTCCATGCTCATCCTCTTCAACCTGGTGTTCCTCGG...GATATGGAAGTCCTGGTTAGGGATAGGCTTGCCATCCTTGGGATGTCTTTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| CDS-3UTR CAA 90 bp | GAACATAGCAGCATCCAGGTAGGCATGGTGCAGGAGAAGCTGAGAGTTCTCCTTTCATCTGAAGGCTGCTaGCAGGAAGATCCTGTTCCA | + |
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Preference number: 5 (lower is better) Translates to: EHSSIQVGMVQEKLRVLLSSEGC*QEDPVP Trigger: TGGAACAGGATCTTCCTGCAAGCAGCCTTCAGATGA...AAGGAGAACTCTCAGCTTCTCCTGCACCATGCCTACCTGGATGCTGCTATGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128619.8 |
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| CDS-3UTR CAA 90 bp | ACAAGTCTCAGAAAGCAGCAGCCCTGTGTGGACTCTCCAATAAAGTTCAAGTTACACCCATGGCCACCCTaGCAGGAAGATCCTGTTCCA | + |
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Preference number: 5 (lower is better) Translates to: TSLRKQQPCVDSPIKFKLHPWPP*QEDPVP Trigger: TGGAACAGGATCTTCCTGCAAGGGTGGCCATGGGTG...TAACTTGAACTTTATTGGAGAGTCCACACAGGGCTGCTGCTTTCTGAGACTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| CDS-3UTR CAA 90 bp | GAACATAGCAGCATCCAGGTAGGCATGGTGCAGGAGAAGCTGAGAGTTCTCCTTCTCCAGCTCAAATTCTaGATCCAGTTCCTCTTCATG | + |
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Preference number: 5 (lower is better) Translates to: EHSSIQVGMVQEKLRVLLLQLKF*IQFLFM Trigger: CATGAAGAGGAACTGGATCAAGAATTTGAGCTGGAG...AAGGAGAACTCTCAGCTTCTCCTGCACCATGCCTACCTGGATGCTGCTATGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128619.8 |
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| CDS-3UTR CAA 90 bp | GCTGTGAGAGGAACCACCATGTTCCTCCATGGCTACAAGTCTCAGAAAGCAGCATACTCGTTCTCTGTCTaGTACCACCTTCTCTTAACT | + |
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Preference number: 5 (lower is better) Translates to: AVRGTTMFLHGYKSQKAAYSFSV*YHLLLT Trigger: AGTTAAGAGAAGGTGGTACAAGACAGAGAACGAGTA...TGCTGCTTTCTGAGACTTGTAGCCATGGAGGAACATGGTGGTTCCTCTCACAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| CDS-3UTR CAA 90 bp | GAACATAGCAGCATCCAGGTAGGCATGGTGCAGGAGAAGCTGAGAGTTCTCCTTTACTCGTTCTCTGTCTaGTACCACCTTCTCTTAACT | + |
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Preference number: 5 (lower is better) Translates to: EHSSIQVGMVQEKLRVLLYSFSV*YHLLLT Trigger: AGTTAAGAGAAGGTGGTACAAGACAGAGAACGAGTA...AAGGAGAACTCTCAGCTTCTCCTGCACCATGCCTACCTGGATGCTGCTATGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128619.8 |
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| CDS-3UTR CAA 90 bp | TCTCAGAATTTCTCAGAAAGACATCCCAAGGATGGCAAGCCTATCCCTAACCAGCTCCAGCTCAAATTCTaGATCCAGTTCCTCTTCATG | + |
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Preference number: 5 (lower is better) Translates to: SQNFSERHPKDGKPIPNQLQLKF*IQFLFM Trigger: CATGAAGAGGAACTGGATCAAGAATTTGAGCTGGAG...CTGGTTAGGGATAGGCTTGCCATCCTTGGGATGTCTTTCTGAGAAATTCTGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| CDS TCA 72 bp | CCACGCAGAACGCGATGGTGCTGTGGAGAAGGACCATaGCCACGCCTGGCGCCCCCAGCACACACCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: PRRTRWCCGEGP*PRLAPPAHTSR Trigger: CCTGCTGGTGTGTGCTGGGGGCGCCAGGCGTGGTCATGGTCCTTCTCCACAGCACCATCGCGTTCTGCGTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
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| CDS CCA 72 bp | GTAGAGCAGGCGGCAAGCAGAGCGTGCAGTCGATGGTaGGCTTGTGGGGAGAGGTGCCGGGCCAAAGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: VEQAASRACSRW*ACGERCRAKVS Trigger: GGAGACTTTGGCCCGGCACCTCTCCCCACAAGCCCACCATCGACTGCACGCTCTGCTTGCCGCCTGCTCTAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
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| CDS GCA 72 bp | AGAGCGTGCAGTCGATGGTGGGCTTGTGGGGAGAGGTaGCGGGCCAAAGTCTCCCGGACACAGGGTGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: RACSRWWACGER*RAKVSRTQGVS Trigger: AGAGACACCCTGTGTCCGGGAGACTTTGGCCCGGCACCTCTCCCCACAAGCCCACCATCGACTGCACGCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
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| CDS GCA 72 bp | ATGAGCATGGAGGTAGAGCAGGCGGCAAGCAGAGCGTaGAGTCGATGGTGGGCTTGTGGGGAGAGGTGCCGG | + |
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Preference number: 6 (lower is better) Translates to: MSMEVEQAASRA*SRWWACGERCR Trigger: CCGGCACCTCTCCCCACAAGCCCACCATCGACTGCACGCTCTGCTTGCCGCCTGCTCTACCTCCATGCTCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
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| CDS CCA 72 bp | ACTGAACATGGTGCTCACGCAGCGGGGAAGAGGTGGTaGCGTGAGTCCATCCAGGCGCATGAGCAGAGCCGG | + |
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Preference number: 6 (lower is better) Translates to: TEHGAHAAGKRW*RESIQAHEQSR Trigger: CCGGCTCTGCTCATGCGCCTGGATGGACTCACGCCACCACCTCTTCCCCGCTGCGTGAGCACCATGTTCAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
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| CDS GCA 72 bp | GGAATGGGAGGCACCTTGCGCAGATGGAGTAGGTTGTaGAGACGGAGGCTGCCGGCACAGCTCCAGGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: GMGGTLRRWSRL*RRRLPAQLQAE Trigger: TTCAGCCTGGAGCTGTGCCGGCAGCCTCCGTCTGCACAACCTACTCCATCTGCGCAAGGTGCCTCCCATTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
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| CDS CAA 72 bp | GCCAGCCACCACCAGCAGAGCAGACGACCCAGGCCCTaGGCTACAATGCAGAGGCTGTGCTGCAGAGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: ASHHQQSRRPRP*ATMQRLCCREL Trigger: CAACTCTCTGCAGCACAGCCTCTGCATTGTAGCCAAGGGCCTGGGTCGTCTGCTCTGCTGGTGGTGGCTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
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| CDS GCA 72 bp | CCCACTCTCCACAGTGACTCCCAGCCAGTTGAGCGCTaGCCAGCACCAGAGGTCCTCATAGCTACCATGCCA | + |
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Preference number: 6 (lower is better) Translates to: PTLHSDSQPVER*PAPEVLIATMP Trigger: TGGCATGGTAGCTATGAGGACCTCTGGTGCTGGGCAGCGCTCAACTGGCTGGGAGTCACTGTGGAGAGTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
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| CDS CAA 72 bp | GTAGGTCAGCAGCCACGGGTAGGAATGGGAGGCACCTaGCGCAGATGGAGTAGGTTGTGCAGACGGAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: VGQQPRVGMGGT*RRWSRLCRRRL Trigger: CAGCCTCCGTCTGCACAACCTACTCCATCTGCGCAAGGTGCCTCCCATTCCTACCCGTGGCTGCTGACCTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
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| CDS CAA 90 bp | ATCAGTTCAGCCAGCCACCACCAGCAGAGCAGACGACCCAGGCCCTaGGCTACAATGCAGAGGCTGTGCTGCAGAGAGTTGAGCTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: ISSASHHQQSRRPRP*ATMQRLCCRELSSG Trigger: GCCAGAGCTCAACTCTCTGCAGCACAGCCTCTGCATTGTAGCCAAGGGCCTGGGTCGTCTGCTCTGCTGGTGGTGGCTGGCTGAACTGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
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| CDS TCA 72 bp | AGAGAACACAGCCAGGACAGGAGCACGGATCGGAACTaGGCCACGCAGAACGCGATGGTGCTGTGGAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: REHSQDRSTDRN*ATQNAMVLWRR Trigger: CCTTCTCCACAGCACCATCGCGTTCTGCGTGGCTCAGTTCCGATCCGTGCTCCTGTCCTGGCTGTGTTCTCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
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| CDS GCA 72 bp | CGACCCAGGCCCTTGGCTACAATGCAGAGGCTGTGCTaGAGAGAGTTGAGCTCTGGCTGCTGCATCTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: RPRPLATMQRLC*RELSSGCCICL Trigger: CAGACAGATGCAGCAGCCAGAGCTCAACTCTCTGCAGCACAGCCTCTGCATTGTAGCCAAGGGCCTGGGTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
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| CDS CCA 72 bp | AAAACTGAACATGGTGCTCACGCAGCGGGGAAGAGGTaGTGGCGTGAGTCCATCCAGGCGCATGAGCAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: KTEHGAHAAGKR*WRESIQAHEQS Trigger: GCTCTGCTCATGCGCCTGGATGGACTCACGCCACCACCTCTTCCCCGCTGCGTGAGCACCATGTTCAGTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
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| CDS CAA 90 bp | CGACCCAGGCCCTTGGCTACAATGCAGAGGCTGTGCTGCAGAGAGTaGAGCTCTGGCTGCTGCATCTGTCTGAAGAACTCCGGGAAGTTA | + |
|
Preference number: 6 (lower is better) Translates to: RPRPLATMQRLCCRE*SSGCCICLKNSGKL Trigger: TAACTTCCCGGAGTTCTTCAGACAGATGCAGCAGCCAGAGCTCAACTCTCTGCAGCACAGCCTCTGCATTGTAGCCAAGGGCCTGGGTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
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| CDS GCA 72 bp | GTTGTTGCAGTAGAAAGCAGTGTCCCCAACAGGCCATaGTGGGACCCGCCCAGTGGGATGTACACATACCTG | + |
|
Preference number: 6 (lower is better) Translates to: VVAVESSVPNRP*WDPPSGMYTYL Trigger: CAGGTATGTGTACATCCCACTGGGCGGGTCCCAGCATGGCCTGTTGGGGACACTGCTTTCTACTGCAACAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
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| CDS CCA 72 bp | GTTGCAGTAGAAAGCAGTGTCCCCAACAGGCCATGCTaGGACCCGCCCAGTGGGATGTACACATACCTGATT | + |
|
Preference number: 6 (lower is better) Translates to: VAVESSVPNRPC*DPPSGMYTYLI Trigger: AATCAGGTATGTGTACATCCCACTGGGCGGGTCCCAGCATGGCCTGTTGGGGACACTGCTTTCTACTGCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
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| CDS CAA 72 bp | CCCTTGGCTACAATGCAGAGGCTGTGCTGCAGAGAGTaGAGCTCTGGCTGCTGCATCTGTCTGAAGAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: PLATMQRLCCRE*SSGCCICLKNS Trigger: GGAGTTCTTCAGACAGATGCAGCAGCCAGAGCTCAACTCTCTGCAGCACAGCCTCTGCATTGTAGCCAAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
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| CDS GCA 72 bp | ATGCAGAGGCTGTGCTGCAGAGAGTTGAGCTCTGGCTaGTGCATCTGTCTGAAGAACTCCGGGAAGTTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: MQRLCCRELSSG*CICLKNSGKLR Trigger: CCTTAACTTCCCGGAGTTCTTCAGACAGATGCAGCAGCCAGAGCTCAACTCTCTGCAGCACAGCCTCTGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
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| CDS GCA 72 bp | GCTACCATGCCAGTAGCTCACGAACGCAAACGTTGTTaGAGTAGAAAGCAGTGTCCCCAACAGGCCATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ATMPVAHERKRC*SRKQCPQQAML Trigger: CAGCATGGCCTGTTGGGGACACTGCTTTCTACTGCAACAACGTTTGCGTTCGTGAGCTACTGGCATGGTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
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| CDS CCA 72 bp | TACAATGCAGAGGCTGTGCTGCAGAGAGTTGAGCTCTaGCTGCTGCATCTGTCTGAAGAACTCCGGGAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: YNAEAVLQRVEL*LLHLSEELREV Trigger: AACTTCCCGGAGTTCTTCAGACAGATGCAGCAGCCAGAGCTCAACTCTCTGCAGCACAGCCTCTGCATTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
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| CDS CAA 90 bp | TGGCCACCCTTGCAGGAAGATCCTGTTCCAGTAGGTTTTCCCAACTaGAATTCCCCCGAGGAACACCAGGTTGAAGAGGATGAGCATGGA | + |
|
Preference number: 6 (lower is better) Translates to: WPPLQEDPVPVGFPN*NSPEEHQVEEDEHG Trigger: TCCATGCTCATCCTCTTCAACCTGGTGTTCCTCGGGGGAATTCAAGTTGGGAAAACCTACTGGAACAGGATCTTCCTGCAAGGGTGGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044190.12 |
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| CDS CAA 90 bp | GAAGGCTGCTTGCAGGAAGATCCTGTTCCAGTAGGTTTTCCCAACTaGAATTCCCCCGAGGAACACCAGGTTGAAGAGGATGAGCATGGA | + |
|
Preference number: 6 (lower is better) Translates to: EGCLQEDPVPVGFPN*NSPEEHQVEEDEHG Trigger: TCCATGCTCATCCTCTTCAACCTGGTGTTCCTCGGGGGAATTCAAGTTGGGAAAACCTACTGGAACAGGATCTTCCTGCAAGCAGCCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128619.8 |
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| CDS CAA 72 bp | AGGTCTCTGTGGCCAGAAGATGTCCAGGCTCAGTTCTaGCAGGAAGATCCTGTTCCAGTAGGTTTTCCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: RSLWPEDVQAQF*QEDPVPVGFPN Trigger: GTTGGGAAAACCTACTGGAACAGGATCTTCCTGCAAGAACTGAGCCTGGACATCTTCTGGCCACAGAGACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192585.2 |
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| CDS CAA 90 bp | GCTCAGTTCTTGCAGGAAGATCCTGTTCCAGTAGGTTTTCCCAACTaGAATTCCCCCGAGGAACACCAGGTTGAAGAGGATGAGCATGGA | + |
|
Preference number: 6 (lower is better) Translates to: AQFLQEDPVPVGFPN*NSPEEHQVEEDEHG Trigger: TCCATGCTCATCCTCTTCAACCTGGTGTTCCTCGGGGGAATTCAAGTTGGGAAAACCTACTGGAACAGGATCTTCCTGCAAGAACTGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192585.2 |
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| CDS GCA 72 bp | GTCTTGTACCACCTTCTCTTAACTTCCTCCACACTTTaGAGCCTTAGGGTGGAGAGCAGAAGGAGAGAACAC | + |
|
Preference number: 6 (lower is better) Translates to: VLYHLLLTSSTL*SLRVESRRREH Trigger: GTGTTCTCTCCTTCTGCTCTCCACCCTAAGGCTGCAAAGTGTGGAGGAAGTTAAGAGAAGGTGGTACAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
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| CDS CAA 90 bp | TCCAAAGACAGGTCTCTGTGGCCAGAAGATGTCCAGGCTCAGTTCTaGCAGGAAGATCCTGTTCCAGTAGGTTTTCCCAACTTGAATTCC | + |
|
Preference number: 6 (lower is better) Translates to: SKDRSLWPEDVQAQF*QEDPVPVGFPNLNS Trigger: GGAATTCAAGTTGGGAAAACCTACTGGAACAGGATCTTCCTGCAAGAACTGAGCCTGGACATCTTCTGGCCACAGAGACCTGTCTTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192585.2 |
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| CDS CAA 72 bp | TTGCAGGAAGATCCTGTTCCAGTAGGTTTTCCCAACTaGAATTCCCCCGAGGAACACCAGGTTGAAGAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: LQEDPVPVGFPN*NSPEEHQVEED Trigger: ATCCTCTTCAACCTGGTGTTCCTCGGGGGAATTCAAGTTGGGAAAACCTACTGGAACAGGATCTTCCTGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
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| CDS TCA 72 bp | CCTCCAAATAGAGTGTCCATCTCCAGCTCAAATTCTTaGTCCAGTTCCTCTTCATGCTCTCTGGAGACTTTG | + |
|
Preference number: 6 (lower is better) Translates to: PPNRVSISSSNS*SSSSSCSLETL Trigger: CAAAGTCTCCAGAGAGCATGAAGAGGAACTGGATCAAGAATTTGAGCTGGAGATGGACACTCTATTTGGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
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| CDS CCA 72 bp | GCTCAAATTCTTGATCCAGTTCCTCTTCATGCTCTCTaGAGACTTTGTAAACTTCATAGAAAGAGCGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: AQILDPVPLHAL*RLCKLHRKSGS Trigger: ACTTCCGCTCTTTCTATGAAGTTTACAAAGTCTCCAGAGAGCATGAAGAGGAACTGGATCAAGAATTTGAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044190.12 ENSMUST00000128619.8 ENSMUST00000192585.2 |
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