Pregenerated sensors for HGSNAT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037260Ensembl transcript IDs: ENSMUST00000037609.8, ENSMUST00000211550.2
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGACCAAACCCCAGGTGCTGTCCAAGCTTGGAATGGGTTCTCTCTaGATCAAGCACAGTCTACCAACCTTGGCCTCTTTCACAGAGGCA | + |
|
Preference number: 1 (lower is better) Translates to: GTKPQVLSKLGMGSL*IKHSLPTLASFTEA Trigger: TGCCTCTGTGAAAGAGGCCAAGGTTGGTAGACTGTGCTTGATTCAGAGAGAACCCATTCCAAGCTTGGACAGCACCTGGGGTTTGGTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| 3UTR CCA 90 bp | CTTGTTTGTGATGCCAGGGACCAAACCCCAGGTGCTGTCCAAGCTTaGAATGGGTTCTCTCTGAATCAAGCACAGTCTACCAACCTTGGC | + |
|
Preference number: 1 (lower is better) Translates to: LVCDARDQTPGAVQA*NGFSLNQAQSTNLG Trigger: GCCAAGGTTGGTAGACTGTGCTTGATTCAGAGAGAACCCATTCCAAGCTTGGACAGCACCTGGGGTTTGGTCCCTGGCATCACAAACAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| 3UTR GCA 90 bp | AGCTTTATAGTCTGTGACCATGAAACCACGGCGGTACGGTCGGCATaGGCATACACGTGGAAAGTCAGTTTTCAGGAAATAAGACTTGGT | + |
|
Preference number: 1 (lower is better) Translates to: SFIVCDHETTAVRSA*AYTWKVSFQEIRLG Trigger: ACCAAGTCTTATTTCCTGAAAACTGACTTTCCACGTGTATGCGCATGCCGACCGTACCGCCGTGGTTTCATGGTCACAGACTATAAAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| 3UTR CCA 90 bp | TGTGACCATGAAACCACGGCGGTACGGTCGGCATGCGCATACACGTaGAAAGTCAGTTTTCAGGAAATAAGACTTGGTTCTTTTTGTTGT | + |
|
Preference number: 1 (lower is better) Translates to: CDHETTAVRSACAYT*KVSFQEIRLGSFCC Trigger: ACAACAAAAAGAACCAAGTCTTATTTCCTGAAAACTGACTTTCCACGTGTATGCGCATGCCGACCGTACCGCCGTGGTTTCATGGTCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| 3UTR TCA 90 bp | ATTTCAGCTTTCTTCCAAGTGAGGAAAGAAGCGAGTAGCTTTAAATaGTGCATTTGGTGGGGCCATCAAAGCCGTGAAAGTGGACAAGGA | + |
|
Preference number: 1 (lower is better) Translates to: ISAFFQVRKEASSFK*CIWWGHQSRESGQG Trigger: TCCTTGTCCACTTTCACGGCTTTGATGGCCCCACCAAATGCATCATTTAAAGCTACTCGCTTCTTTCCTCACTTGGAAGAAAGCTGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| 3UTR TCA 90 bp | AACCTTGGCCTCTTTCACAGAGGCAAAATGTCCAGAGTAAATCTCTaGGAAGTTAAACAAGATTTCCACACATGTTCCAAATATAGCAAT | + |
|
Preference number: 1 (lower is better) Translates to: NLGLFHRGKMSRVNL*EVKQDFHTCSKYSN Trigger: ATTGCTATATTTGGAACATGTGTGGAAATCTTGTTTAACTTCTCAGAGATTTACTCTGGACATTTTGCCTCTGTGAAAGAGGCCAAGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGAAAGACACAGGCAACTTTCTGATGTCTAAGCAAATCGGTTTGGACGCAGCAAAGCAATCCCCTCTGTaGGGGAGGCTGCCGCCGCTC | + |
|
Preference number: 2 (lower is better) Translates to: QKDTGNFLMSKQIGLDAAKQSPL*GRLPPL Trigger: GAGCGGCGGCAGCCTCCCTCACAGAGGGGATTGCTT...TGCTGCGTCCAAACCGATTTGCTTAGACATCAGAAAGTTGCCTGTGTCTTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGATGCCAGGGACCAAACCCCAGGTGCTGTCCAAGCTTGGAATGGGTTCTCTCCAATTTCATACAAAATaGAGAAAGCGGAGAGCATGG | + |
|
Preference number: 2 (lower is better) Translates to: VMPGTKPQVLSKLGMGSLQFHTK*RKRRAW Trigger: CCATGCTCTCCGCTTTCTCCATTTTGTATGAAATTG...GAGAGAACCCATTCCAAGCTTGGACAGCACCTGGGGTTTGGTCCCTGGCATCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGTTCTCTCTGAATCAAGCACAGTCTACCAACCTTGGCCTCTTTCACAGAGGCAGATGCATAGATATGTaGGTCAGAAAGACACAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: GFSLNQAQSTNLGLFHRGRCIDM*VRKTQA Trigger: TGCCTGTGTCTTTCTGACTCACATATCTATGCATCT...GCCTCTGTGAAAGAGGCCAAGGTTGGTAGACTGTGCTTGATTCAGAGAGAACCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| 3UTR TCA 72 bp | CGGTTTGGACGCAGCATCTGGAAGCAATCCCCTCTGTaGGGGAGGCTGCCGCCGCTCTTCTCCCAGACCCCC | + |
|
Preference number: 3 (lower is better) Translates to: RFGRSIWKQSPL*GRLPPLFSQTP Trigger: GGGGGTCTGGGAGAAGAGCGGCGGCAGCCTCCCTCACAGAGGGGATTGCTTCCAGATGCTGCGTCCAAACCG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| 3UTR CCA 72 bp | GATGCCAGGGACCAAACCCCAGGTGCTGTCCAAGCTTaGAATGGGTTCTCTCTGAATCAAGCACAGTCTACC | + |
|
Preference number: 3 (lower is better) Translates to: DARDQTPGAVQA*NGFSLNQAQST Trigger: GGTAGACTGTGCTTGATTCAGAGAGAACCCATTCCAAGCTTGGACAGCACCTGGGGTTTGGTCCCTGGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| 3UTR TCA 72 bp | CCCCAGGTGCTGTCCAAGCTTGGAATGGGTTCTCTCTaGATCAAGCACAGTCTACCAACCTTGGCCTCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: PQVLSKLGMGSL*IKHSLPTLASF Trigger: GAAAGAGGCCAAGGTTGGTAGACTGTGCTTGATTCAGAGAGAACCCATTCCAAGCTTGGACAGCACCTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| 3UTR CCA 72 bp | CAGGGACCAAACCCCAGGTGCTGTCCAAGCTTGGAATaGGTTCTCTCTGAATCAAGCACAGTCTACCAACCT | + |
|
Preference number: 3 (lower is better) Translates to: QGPNPRCCPSLE*VLSESSTVYQP Trigger: AGGTTGGTAGACTGTGCTTGATTCAGAGAGAACCCATTCCAAGCTTGGACAGCACCTGGGGTTTGGTCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| 3UTR GCA 72 bp | GTCTGTGACCATGAAACCACGGCGGTACGGTCGGCATaGGCATACACGTGGAAAGTCAGTTTTCAGGAAATA | + |
|
Preference number: 3 (lower is better) Translates to: VCDHETTAVRSA*AYTWKVSFQEI Trigger: TATTTCCTGAAAACTGACTTTCCACGTGTATGCGCATGCCGACCGTACCGCCGTGGTTTCATGGTCACAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| 3UTR CCA 72 bp | GAAACCACGGCGGTACGGTCGGCATGCGCATACACGTaGAAAGTCAGTTTTCAGGAAATAAGACTTGGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: ETTAVRSACAYT*KVSFQEIRLGS Trigger: AGAACCAAGTCTTATTTCCTGAAAACTGACTTTCCACGTGTATGCGCATGCCGACCGTACCGCCGTGGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| 3UTR CCA 72 bp | TGGGTTCTCTCTGAATCAAGCACAGTCTACCAACCTTaGCCTCTTTCACAGAGGCAAAATGTCCAGAGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: WVLSESSTVYQP*PLSQRQNVQSK Trigger: TTTACTCTGGACATTTTGCCTCTGTGAAAGAGGCCAAGGTTGGTAGACTGTGCTTGATTCAGAGAGAACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| 3UTR TCA 72 bp | TTCTTCCAAGTGAGGAAAGAAGCGAGTAGCTTTAAATaGTGCATTTGGTGGGGCCATCAAAGCCGTGAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: FFQVRKEASSFK*CIWWGHQSRES Trigger: ACTTTCACGGCTTTGATGGCCCCACCAAATGCATCATTTAAAGCTACTCGCTTCTTTCCTCACTTGGAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAATCTATATTTCAGCTTTCTTCCAAGTGAGGAAAGAAGCGAGTAGCTTTAAAAGGTGCTGTCCAAGCTaGGAATGGGTTCTCTCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: QIYISAFFQVRKEASSFKRCCPS*EWVLSE Trigger: TTCAGAGAGAACCCATTCCAAGCTTGGACAGCACCT...TTTAAAGCTACTCGCTTCTTTCCTCACTTGGAAGAAAGCTGAAATATAGATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS-3UTR GCA 90 bp | GTGATGCCAGGGACCAAACCCCAGGTGCTGTCCAAGCTTGGAATGGGTTCTCTCGTCACTCCCAACCGCTaGAGGACACCAGGGATCCGC | + |
|
Preference number: 4 (lower is better) Translates to: VMPGTKPQVLSKLGMGSLVTPNR*RTPGIR Trigger: GCGGATCCCTGGTGTCCTGCAGCGGTTGGGAGTGAC...GAGAGAACCCATTCCAAGCTTGGACAGCACCTGGGGTTTGGTCCCTGGCATCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS-3UTR TCA 90 bp | GTGATGCCAGGGACCAAACCCCAGGTGCTGTCCAAGCTTGGAATGGGTTCTCTCGGGTGCTGGTACAGGTaGTTGTCTCCCAGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VMPGTKPQVLSKLGMGSLGCWYR*LSPRSR Trigger: CCTGCTCCTGGGAGACAATCACCTGTACCAGCACCC...GAGAGAACCCATTCCAAGCTTGGACAGCACCTGGGGTTTGGTCCCTGGCATCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS-3UTR CCA 90 bp | GCCAGGGACCAAACCCCAGGTGCTGTCCAAGCTTGGAATGGGTTCTCTCTGAATCACGCTTGGCTTTGCTaGCTTTCCACCGTGAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ARDQTPGAVQAWNGFSLNHAWLC*LSTVRD Trigger: GTCTCTCACGGTGGAAAGCCAGCAAAGCCAAGCGTG...ATTCAGAGAGAACCCATTCCAAGCTTGGACAGCACCTGGGGTTTGGTCCCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS-3UTR GCA 90 bp | ATGGCATTTCAGATGCATAGATATGTGAGTCAGAAAGACACAGGCAACTTTCTGCCGGGCCCGCGCCCATaGCTCCCACAGCCTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: MAFQMHRYVSQKDTGNFLPGPRP*LPQPLS Trigger: GGAGAGAGGCTGTGGGAGGCATGGGCGCGGGCCCGG...CAGAAAGTTGCCTGTGTCTTTCTGACTCACATATCTATGCATCTGAAATGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS-3UTR GCA 90 bp | GGGTTCTCTCTGAATCAAGCACAGTCTACCAACCTTGGCCTCTTTCACAGAGGCGCTCACAGAGACAGGTaGCACGCTTGGCTTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GFSLNQAQSTNLGLFHRGAHRDR*HAWLCW Trigger: CCAGCAAAGCCAAGCGTGGCACCTGTCTCTGTGAGC...GCCTCTGTGAAAGAGGCCAAGGTTGGTAGACTGTGCTTGATTCAGAGAGAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS-3UTR GCA 90 bp | GCCAGGGACCAAACCCCAGGTGCTGTCCAAGCTTGGAATGGGTTCTCTCTGAATGGAGAGAGAAGCAGCTaGTTTCCAAGGTACAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: ARDQTPGAVQAWNGFSLNGERSS*FPRYNC Trigger: ACAGTTGTACCTTGGAAAGCAGCTGCTTCTCTCTCC...ATTCAGAGAGAACCCATTCCAAGCTTGGACAGCACCTGGGGTTTGGTCCCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS-3UTR GCA 90 bp | CATAGATATGTGAGTCAGAAAGACACAGGCAACTTTCTGATGTCTAAGCAAATCCCTCTCTCCGGGAGTTaGGCTCTGTCCCCGCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: HRYVSQKDTGNFLMSKQIPLSGS*ALSPQP Trigger: CGGCTGCGGGGACAGAGCGCAACTCCCGGAGAGAGG...GATTTGCTTAGACATCAGAAAGTTGCCTGTGTCTTTCTGACTCACATATCTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS-3UTR GCA 90 bp | GGGTTCTCTCTGAATCAAGCACAGTCTACCAACCTTGGCCTCTTTCACAGAGGCTCAAAGCCAGCCAAATaGTTTCCAGCGTCAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: GFSLNQAQSTNLGLFHRGSKPAK*FPASEW Trigger: CCATTCTGACGCTGGAAAGCATTTGGCTGGCTTTGA...GCCTCTGTGAAAGAGGCCAAGGTTGGTAGACTGTGCTTGATTCAGAGAGAACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS-3UTR CCA 90 bp | GTGATGCCAGGGACCAAACCCCAGGTGCTGTCCAAGCTTGGAATGGGTTCTCTCAAGGTTACTGTCCACTaGATTCTCATTGACGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: VMPGTKPQVLSKLGMGSLKVTVH*ILIDDD Trigger: ATCATCGTCAATGAGAATCCAGTGGACAGTAACCTT...GAGAGAACCCATTCCAAGCTTGGACAGCACCTGGGGTTTGGTCCCTGGCATCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAAGACACAGGCAACTTTCTGATGTCTAAGCAAATCGGTTTGGACGCAGCACAGCACGGTGGAGGATaGGTGCTGGTACAGGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: QKDTGNFLMSKQIGLDAAQHGGG*VLVQVI Trigger: AATCACCTGTACCAGCACCCATCCTCCACCGTGCTG...TGCTGCGTCCAAACCGATTTGCTTAGACATCAGAAAGTTGCCTGTGTCTTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| 3UTR CAA 72 bp | GACACAGGCAACTTTCTGATGTCTAAGCAAATCGGTTaGGACGCAGCATCTGGAAGCAATCCCCTCTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DTGNFLMSKQIG*DAASGSNPLCE Trigger: CTCACAGAGGGGATTGCTTCCAGATGCTGCGTCCAAACCGATTTGCTTAGACATCAGAAAGTTGCCTGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS-3UTR TCA 90 bp | GCGGAGAGCATGGCATTTCAGATGCATAGATATGTGAGTCAGAAAGACACAGGCATAAGCAGCAAAGCCTaGTCCATCTTCAGCTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: AESMAFQMHRYVSQKDTGISSKA*SIFSST Trigger: CGTGGAGCTGAAGATGGATCAGGCTTTGCTGCTTAT...GCCTGTGTCTTTCTGACTCACATATCTATGCATCTGAAATGCCATGCTCTCCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS-3UTR GCA 90 bp | GCGGAGAGCATGGCATTTCAGATGCATAGATATGTGAGTCAGAAAGACACAGGCATTTGTATTCCAGCCTaGAAGCTGCTCTCTCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: AESMAFQMHRYVSQKDTGICIPA*KLLSPP Trigger: CGGAGGAGAGAGCAGCTTGCAGGCTGGAATACAAAT...GCCTGTGTCTTTCTGACTCACATATCTATGCATCTGAAATGCCATGCTCTCCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS-3UTR CCA 90 bp | GCCAGGGACCAAACCCCAGGTGCTGTCCAAGCTTGGAATGGGTTCTCTCTGAATTTTATCCCAAGACAATaGACCAAGGCAATAATTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ARDQTPGAVQAWNGFSLNFIPRQ*TKAIIG Trigger: CCCAATTATTGCCTTGGTCCATTGTCTTGGGATAAA...ATTCAGAGAGAACCCATTCCAAGCTTGGACAGCACCTGGGGTTTGGTCCCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS-3UTR CCA 90 bp | GGGTTCTCTCTGAATCAAGCACAGTCTACCAACCTTGGCCTCTTTCACAGAGGCCTTCACATCCACAACTaGGTAGAGAATGAGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GFSLNQAQSTNLGLFHRGLHIHN*VENEED Trigger: ATCCTCCTCATTCTCTACCCAGTTGTGGATGTGAAG...GCCTCTGTGAAAGAGGCCAAGGTTGGTAGACTGTGCTTGATTCAGAGAGAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS-3UTR TCA 90 bp | AATATAGCAATTTCATACAAAATGGAGAAAGCGGAGAGCATGGCATTTCAGATGAGAGCACGTAGGCGATaGGCACCCAGAGAGCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NIAISYKMEKAESMAFQMRARRR*APREPW Trigger: CCACGGCTCTCTGGGTGCTCATCGCCTACGTGCTCT...CATCTGAAATGCCATGCTCTCCGCTTTCTCCATTTTGTATGAAATTGCTATATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS-3UTR TCA 90 bp | GCGGAGAGCATGGCATTTCAGATGCATAGATATGTGAGTCAGAAAGACACAGGCCAGCAGTTTGAGTTTTaGACATCCTCGTTGCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: AESMAFQMHRYVSQKDTGQQFEF*TSSLQD Trigger: ATCCTGCAACGAGGATGTTCAAAACTCAAACTGCTG...GCCTGTGTCTTTCTGACTCACATATCTATGCATCTGAAATGCCATGCTCTCCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS-3UTR TCA 90 bp | CAAATCTATATTTCAGCTTTCTTCCAAGTGAGGAAAGAAGCGAGTAGCTTTAAAGGGGCCAGCTGGACGTaGTGTCTCGGAGAGAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QIYISAFFQVRKEASSFKGASWT*CLGERS Trigger: GCTTCTCTCTCCGAGACATCACGTCCAGCTGGCCCC...TTTAAAGCTACTCGCTTCTTTCCTCACTTGGAAGAAAGCTGAAATATAGATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS-3UTR GCA 90 bp | CATAGATATGTGAGTCAGAAAGACACAGGCAACTTTCTGATGTCTAAGCAAATCTGGACCCATGCTGGGTaGTCACAGAGACAGGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HRYVSQKDTGNFLMSKQIWTHAG*SQRQVP Trigger: TGGCACCTGTCTCTGTGAGCACCCAGCATGGGTCCA...GATTTGCTTAGACATCAGAAAGTTGCCTGTGTCTTTCTGACTCACATATCTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS-3UTR TCA 90 bp | CATAGATATGTGAGTCAGAAAGACACAGGCAACTTTCTGATGTCTAAGCAAATCGCTCCTCCAGTACAATaGGGATACTTCCCCAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HRYVSQKDTGNFLMSKQIAPPVQ*GYFPKS Trigger: GGACTTGGGGAAGTATCCTCATTGTACTGGAGGAGC...GATTTGCTTAGACATCAGAAAGTTGCCTGTGTCTTTCTGACTCACATATCTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS-3UTR GCA 90 bp | AATATAGCAATTTCATACAAAATGGAGAAAGCGGAGAGCATGGCATTTCAGATGTGCAGGATGGACCCATaGTGGGTGCTCACAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: NIAISYKMEKAESMAFQMCRMDP*WVLTET Trigger: TGTCTCTGTGAGCACCCAGCATGGGTCCATCCTGCA...CATCTGAAATGCCATGCTCTCCGCTTTCTCCATTTTGTATGAAATTGCTATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS-3UTR CCA 90 bp | CATAGATATGTGAGTCAGAAAGACACAGGCAACTTTCTGATGTCTAAGCAAATCTGTGATACAGCACGGTaGAGGATGGGTGCTGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: HRYVSQKDTGNFLMSKQICDTAR*RMGAGT Trigger: TGTACCAGCACCCATCCTCCACCGTGCTGTATCACA...GATTTGCTTAGACATCAGAAAGTTGCCTGTGTCTTTCTGACTCACATATCTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS-3UTR GCA 90 bp | AAATATAGCAATTTCATACAAAATGGAGAAAGCGGAGAGCATGGCATTTCAGATGAGGTGGAGTTAACCTaGAGGATGGACCCATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KYSNFIQNGESGEHGISDEVELT*RMDPCW Trigger: CCAGCATGGGTCCATCCTGCAGGTTAACTCCACCTC...ATCTGAAATGCCATGCTCTCCGCTTTCTCCATTTTGTATGAAATTGCTATATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS-3UTR GCA 90 bp | GTTCCAAATATAGCAATTTCATACAAAATGGAGAAAGCGGAGAGCATGGCATTTGTCGATGTAGCCAGCTaGTCCTCCAGTACAATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VPNIAISYKMEKAESMAFVDVAS*SSSTMR Trigger: CCTCATTGTACTGGAGGAGCAGCTGGCTACATCGAC...AAATGCCATGCTCTCCGCTTTCTCCATTTTGTATGAAATTGCTATATTTGGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS-3UTR CCA 90 bp | ATGGCATTTCAGATGCATAGATATGTGAGTCAGAAAGACACAGGCAACTTTCTGCAACATACACCAGGATaGAGTTCATCCCTGGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: MAFQMHRYVSQKDTGNFLQHTPG*SSSLDR Trigger: TCTATCCAGGGATGAACTCCATCCTGGTGTATGTTG...CAGAAAGTTGCCTGTGTCTTTCTGACTCACATATCTATGCATCTGAAATGCCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS-3UTR TCA 90 bp | CATAGATATGTGAGTCAGAAAGACACAGGCAACTTTCTGATGTCTAAGCAAATCAGTATTTTTCCTGCCTaGACTCCTAAAAACGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: HRYVSQKDTGNFLMSKQISIFPA*TPKNAI Trigger: GATGGCGTTTTTAGGAGTTCAGGCAGGAAAAATACT...GATTTGCTTAGACATCAGAAAGTTGCCTGTGTCTTTCTGACTCACATATCTATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS-3UTR CCA 90 bp | CAAATCTATATTTCAGCTTTCTTCCAAGTGAGGAAAGAAGCGAGTAGCTTTAAAAATAAATACAAACCATaGGAAGACGAGGTCGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QIYISAFFQVRKEASSFKNKYKP*EDEVGH Trigger: GTGGCCGACCTCGTCTTCCCATGGTTTGTATTTATT...TTTAAAGCTACTCGCTTCTTTCCTCACTTGGAAGAAAGCTGAAATATAGATTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS-3UTR TCA 90 bp | CAAATCTATATTTCAGCTTTCTTCCAAGTGAGGAAAGAAGCGAGTAGCTTTAAACGACTATGTTCTGAATaGGATGCTCTTTGTGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: QIYISAFFQVRKEASSFKRLCSE*DALCVT Trigger: AGTCACACAAAGAGCATCTCATTCAGAACATAGTCG...TTTAAAGCTACTCGCTTCTTTCCTCACTTGGAAGAAAGCTGAAATATAGATTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS-3UTR GCA 90 bp | CATAGATATGTGAGTCAGAAAGACACAGGCAACTTTCTGATGTCTAAGCAAATCTTTGAACATCCTCGTTaGAGGATAGAAGTCATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: HRYVSQKDTGNFLMSKQIFEHPR*RIEVID Trigger: ATCAATGACTTCTATCCTGCAACGAGGATGTTCAAA...GATTTGCTTAGACATCAGAAAGTTGCCTGTGTCTTTCTGACTCACATATCTATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS-3UTR TCA 90 bp | CAAATCTATATTTCAGCTTTCTTCCAAGTGAGGAAAGAAGCGAGTAGCTTTAAATCCAACTTGAATGTTTaGAGTACCAATACTTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QIYISAFFQVRKEASSFKSNLNV*STNTFL Trigger: GAGGAAAGTATTGGTACTTCAAACATTCAAGTTGGA...TTTAAAGCTACTCGCTTCTTTCCTCACTTGGAAGAAAGCTGAAATATAGATTTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS GCA 90 bp | GCGCCGGGCCCGCGCCCATGCCTCCCACAGCCTCTCTCCGGGAGTTaGGCTCTGTCCCCGCAGCCGAGCTGCGCTCTTCTGCCCGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: APGPRPCLPQPLSGS*ALSPQPSCALLPGA Trigger: GGCGCCGGGCAGAAGAGCGCAGCTCGGCTGCGGGGACAGAGCGCAACTCCCGGAGAGAGGCTGTGGGAGGCATGGGCGCGGGCCCGGCGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS GCA 90 bp | GGACCCATGCTGGGTGCTCACAGAGACAGGTGCCACGCTTGGCTTTaGTGGCTTTCCACCGTGAGAGACGTTCGCCAGTGGCTGGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GPMLGAHRDRCHAWL*WLSTVRDVRQWLEG Trigger: ACCTTCCAGCCACTGGCGAACGTCTCTCACGGTGGAAAGCCAGCAAAGCCAAGCGTGGCACCTGTCTCTGTGAGCACCCAGCATGGGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037609.8 ENSMUST00000211550.2 |
||
| CDS CCA 90 bp | CCCATGCTGGGTGCTCACAGAGACAGGTGCCACGCTTGGCTTTGCTaGCTTTCCACCGTGAGAGACGTTCGCCAGTGGCTGGAAGGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PMLGAHRDRCHAWLC*LSTVRDVRQWLEGA Trigger: TGCACCTTCCAGCCACTGGCGAACGTCTCTCACGGTGGAAAGCCAGCAAAGCCAAGCGTGGCACCTGTCTCTGTGAGCACCCAGCATGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037609.8 ENSMUST00000211550.2 |
||
| CDS CCA 90 bp | CAGGATGGACCCATGCTGGGTGCTCACAGAGACAGGTGCCACGCTTaGCTTTGCTGGCTTTCCACCGTGAGAGACGTTCGCCAGTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QDGPMLGAHRDRCHA*LCWLSTVRDVRQWL Trigger: CAGCCACTGGCGAACGTCTCTCACGGTGGAAAGCCAGCAAAGCCAAGCGTGGCACCTGTCTCTGTGAGCACCCAGCATGGGTCCATCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037609.8 ENSMUST00000211550.2 |
||
| CDS GCA 90 bp | TATTCCAGCCTGCAAGCTGCTCTCTCCTCCGAGGTGGAGTTAACCTaGAGGATGGACCCATGCTGGGTGCTCACAGAGACAGGTGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: YSSLQAALSSEVELT*RMDPCWVLTETGAT Trigger: CGTGGCACCTGTCTCTGTGAGCACCCAGCATGGGTCCATCCTGCAGGTTAACTCCACCTCGGAGGAGAGAGCAGCTTGCAGGCTGGAATA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037609.8 ENSMUST00000211550.2 |
||
| CDS CCA 90 bp | AGACTCCTTCAGGGTCGTAGGCCACCTCTGTGTGATACAGCACGGTaGAGGATGGGTGCTGGTACAGGTGATTGTCTCCCAGGAGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RLLQGRRPPLCDTAR*RMGAGTGDCLPGAG Trigger: GCCTGCTCCTGGGAGACAATCACCTGTACCAGCACCCATCCTCCACCGTGCTGTATCACACAGAGGTGGCCTACGACCCTGAAGGAGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS CCA 90 bp | GTCAAAGCCAGCCAAATGCTTTCCAGCGTCAGAATGGTGAGCCACTaGGGCCAGCTGGACGTGATGTCTCGGAGAGAGAAGCAGCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VKASQMLSSVRMVSH*GQLDVMSRREKQLL Trigger: AAGCAGCTGCTTCTCTCTCCGAGACATCACGTCCAGCTGGCCCCAGTGGCTCACCATTCTGACGCTGGAAAGCATTTGGCTGGCTTTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS GCA 90 bp | GTACAGGTGATTGTCTCCCAGGAGCAGGCGGTCGATGTAGCCAGCTaGTCCTCCAGTACAATGAGGATACTTCCCCAAGTCCCCTATACC | + |
|
Preference number: 5 (lower is better) Translates to: VQVIVSQEQAVDVAS*SSSTMRILPQVPYT Trigger: GGTATAGGGGACTTGGGGAAGTATCCTCATTGTACTGGAGGAGCAGCTGGCTACATCGACCGCCTGCTCCTGGGAGACAATCACCTGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS CCA 90 bp | AGGGGAAGTAGTTCTCCAACACCTCGTGGCCAACATACACCAGGATaGAGTTCATCCCTGGATAGAAGAAGGGGGTTCCCGTCCACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RGSSSPTPRGQHTPG*SSSLDRRRGFPSTG Trigger: GCCTGTGGACGGGAACCCCCTTCTTCTATCCAGGGATGAACTCCATCCTGGTGTATGTTGGCCACGAGGTGTTGGAGAACTACTTCCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS GCA 90 bp | AAGAACTCCAACACAGCGACCACGAAGTATGTCACTCCCAACCGCTaGAGGACACCAGGGATCCGCACTTTATCCCAAGACAATGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: KNSNTATTKYVTPNR*RTPGIRTLSQDNGP Trigger: TGGTCCATTGTCTTGGGATAAAGTGCGGATCCCTGGTGTCCTGCAGCGGTTGGGAGTGACATACTTCGTGGTCGCTGTGTTGGAGTTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS TCA 90 bp | CATCATCCAAACTCAGCAAGAGCCTCAGGAGGGATACTGCGACGATaGGGGCTAAACCAACAAGGAATGCGATGCTCACAGGAAGGTTAC | + |
|
Preference number: 5 (lower is better) Translates to: HHPNSARASGGILRR*GLNQQGMRCSQEGY Trigger: GTAACCTTCCTGTGAGCATCGCATTCCTTGTTGGTTTAGCCCTCATCGTCGCAGTATCCCTCCTGAGGCTCTTGCTGAGTTTGGATGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS-3UTR CAA 90 bp | CAAATCTATATTTCAGCTTTCTTCCAAGTGAGGAAAGAAGCGAGTAGCTTTAAAGCCTCTCTCCGGGAGTaGCGCTCTGTCCCCGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QIYISAFFQVRKEASSFKASLRE*RSVPAA Trigger: GGCTGCGGGGACAGAGCGCAACTCCCGGAGAGAGGC...TTTAAAGCTACTCGCTTCTTTCCTCACTTGGAAGAAAGCTGAAATATAGATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS-3UTR CAA 90 bp | GCCAGGGACCAAACCCCAGGTGCTGTCCAAGCTTGGAATGGGTTCTCTCTGAATCCAAATTCTCCAAATTaGTATTCCAGCCTGCAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ARDQTPGAVQAWNGFSLNPNSPN*YSSLQA Trigger: AGCTTGCAGGCTGGAATACAAATTTGGAGAATTTGG...ATTCAGAGAGAACCCATTCCAAGCTTGGACAGCACCTGGGGTTTGGTCCCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS GCA 90 bp | GGAATAGTTTCCAAATTCTCCAAATTTGTATTCCAGCCTGCAAGCTaGTCTCTCCTCCGAGGTGGAGTTAACCTGCAGGATGGACCCATG | + |
|
Preference number: 5 (lower is better) Translates to: GIVSKFSKFVFQPAS*SLLRGGVNLQDGPM Trigger: CATGGGTCCATCCTGCAGGTTAACTCCACCTCGGAGGAGAGAGCAGCTTGCAGGCTGGAATACAAATTTGGAGAATTTGGAAACTATTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037609.8 ENSMUST00000211550.2 |
||
| CDS-3UTR CAA 90 bp | ATGGCATTTCAGATGCATAGATATGTGAGTCAGAAAGACACAGGCAACTTTCTGGTGCCACGCTTGGCTTaGCTGGCTTTCCACCGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: MAFQMHRYVSQKDTGNFLVPRLA*LAFHRE Trigger: CTCACGGTGGAAAGCCAGCAAAGCCAAGCGTGGCAC...CAGAAAGTTGCCTGTGTCTTTCTGACTCACATATCTATGCATCTGAAATGCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS CCA 90 bp | CAACCGCTGCAGGACACCAGGGATCCGCACTTTATCCCAAGACAATaGACCAAGGCAATAATTGGGGTTGACAATGATAACTCCTATACA | + |
|
Preference number: 5 (lower is better) Translates to: QPLQDTRDPHFIPRQ*TKAIIGVDNDNSYT Trigger: TGTATAGGAGTTATCATTGTCAACCCCAATTATTGCCTTGGTCCATTGTCTTGGGATAAAGTGCGGATCCCTGGTGTCCTGCAGCGGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS-3UTR CAA 90 bp | TGGGTTCTCTCTGAATCAAGCACAGTCTACCAACCTTGGCCTCTTTCACAGAGGATCTTCCCCAGCAGTTaGAGTTTTGAACATCCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: WVLSESSTVYQPWPLSQRIFPSS*SFEHPR Trigger: ACGAGGATGTTCAAAACTCAAACTGCTGGGGAAGAT...CCTCTGTGAAAGAGGCCAAGGTTGGTAGACTGTGCTTGATTCAGAGAGAACCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS TCA 90 bp | AAACCATGGGAAGACGAGGTCGGCCACAGTCAGTCCGTTCCAACTTaGATGTTTGAAGTACCAATACTTTCCTCCTCCATAGTTAACAAA | + |
|
Preference number: 5 (lower is better) Translates to: KPWEDEVGHSQSVPT*MFEVPILSSSIVNK Trigger: TTTGTTAACTATGGAGGAGGAAAGTATTGGTACTTCAAACATTCAAGTTGGAACGGACTGACTGTGGCCGACCTCGTCTTCCCATGGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS CAA 90 bp | AGCGCCGGGCCCGCGCCCATGCCTCCCACAGCCTCTCTCCGGGAGTaGCGCTCTGTCCCCGCAGCCGAGCTGCGCTCTTCTGCCCGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SAGPAPMPPTASLRE*RSVPAAELRSSARR Trigger: GCGCCGGGCAGAAGAGCGCAGCTCGGCTGCGGGGACAGAGCGCAACTCCCGGAGAGAGGCTGTGGGAGGCATGGGCGCGGGCCCGGCGCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS GCA 72 bp | GTTGCGCTCTGTCCCCGCAGCCGAGCTGCGCTCTTCTaGCCGGCGCCTGCGCGAGCTCGACCCGCCCGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: VALCPRSRAALF*PAPARARPARH Trigger: ATGACGGGCGGGTCGAGCTCGCGCAGGCGCCGGGCAGAAGAGCGCAGCTCGGCTGCGGGGACAGAGCGCAAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS GCA 72 bp | CTCTCCGGGAGTTGCGCTCTGTCCCCGCAGCCGAGCTaGGCTCTTCTGCCCGGCGCCTGCGCGAGCTCGACC | + |
|
Preference number: 6 (lower is better) Translates to: LSGSCALSPQPS*ALLPGACASST Trigger: GGTCGAGCTCGCGCAGGCGCCGGGCAGAAGAGCGCAGCTCGGCTGCGGGGACAGAGCGCAACTCCCGGAGAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS GCA 72 bp | CCGCGCCCATGCCTCCCACAGCCTCTCTCCGGGAGTTaGGCTCTGTCCCCGCAGCCGAGCTGCGCTCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PRPCLPQPLSGS*ALSPQPSCALL Trigger: CAGAAGAGCGCAGCTCGGCTGCGGGGACAGAGCGCAACTCCCGGAGAGAGGCTGTGGGAGGCATGGGCGCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS CAA 90 bp | TGGACCCATGCTGGGTGCTCACAGAGACAGGTGCCACGCTTGGCTTaGCTGGCTTTCCACCGTGAGAGACGTTCGCCAGTGGCTGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: WTHAGCSQRQVPRLA*LAFHRERRSPVAGR Trigger: CCTTCCAGCCACTGGCGAACGTCTCTCACGGTGGAAAGCCAGCAAAGCCAAGCGTGGCACCTGTCTCTGTGAGCACCCAGCATGGGTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037609.8 ENSMUST00000211550.2 |
||
| CDS CAA 90 bp | GCAGGATGGACCCATGCTGGGTGCTCACAGAGACAGGTGCCACGCTaGGCTTTGCTGGCTTTCCACCGTGAGAGACGTTCGCCAGTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: AGWTHAGCSQRQVPR*ALLAFHRERRSPVA Trigger: AGCCACTGGCGAACGTCTCTCACGGTGGAAAGCCAGCAAAGCCAAGCGTGGCACCTGTCTCTGTGAGCACCCAGCATGGGTCCATCCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037609.8 ENSMUST00000211550.2 |
||
| CDS GCA 72 bp | CTGGGTGCTCACAGAGACAGGTGCCACGCTTGGCTTTaGTGGCTTTCCACCGTGAGAGACGTTCGCCAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LGAHRDRCHAWL*WLSTVRDVRQW Trigger: CCACTGGCGAACGTCTCTCACGGTGGAAAGCCAGCAAAGCCAAGCGTGGCACCTGTCTCTGTGAGCACCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037609.8 ENSMUST00000211550.2 |
||
| CDS CCA 72 bp | GGTGCTCACAGAGACAGGTGCCACGCTTGGCTTTGCTaGCTTTCCACCGTGAGAGACGTTCGCCAGTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GAHRDRCHAWLC*LSTVRDVRQWL Trigger: CAGCCACTGGCGAACGTCTCTCACGGTGGAAAGCCAGCAAAGCCAAGCGTGGCACCTGTCTCTGTGAGCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037609.8 ENSMUST00000211550.2 |
||
| CDS CCA 72 bp | CCCATGCTGGGTGCTCACAGAGACAGGTGCCACGCTTaGCTTTGCTGGCTTTCCACCGTGAGAGACGTTCGC | + |
|
Preference number: 6 (lower is better) Translates to: PMLGAHRDRCHA*LCWLSTVRDVR Trigger: GCGAACGTCTCTCACGGTGGAAAGCCAGCAAAGCCAAGCGTGGCACCTGTCTCTGTGAGCACCCAGCATGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037609.8 ENSMUST00000211550.2 |
||
| CDS CAA 72 bp | ACCCATGCTGGGTGCTCACAGAGACAGGTGCCACGCTaGGCTTTGCTGGCTTTCCACCGTGAGAGACGTTCG | + |
|
Preference number: 6 (lower is better) Translates to: THAGCSQRQVPR*ALLAFHRERRS Trigger: CGAACGTCTCTCACGGTGGAAAGCCAGCAAAGCCAAGCGTGGCACCTGTCTCTGTGAGCACCCAGCATGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037609.8 ENSMUST00000211550.2 |
||
| CDS CCA 72 bp | CAGGGTCGTAGGCCACCTCTGTGTGATACAGCACGGTaGAGGATGGGTGCTGGTACAGGTGATTGTCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: QGRRPPLCDTAR*RMGAGTGDCLP Trigger: TGGGAGACAATCACCTGTACCAGCACCCATCCTCCACCGTGCTGTATCACACAGAGGTGGCCTACGACCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS CCA 72 bp | CTCGTGGCCAACATACACCAGGATGGAGTTCATCCCTaGATAGAAGAAGGGGGTTCCCGTCCACAGGCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LVANIHQDGVHP*IEEGGSRPQAL Trigger: AAGGGCCTGTGGACGGGAACCCCCTTCTTCTATCCAGGGATGAACTCCATCCTGGTGTATGTTGGCCACGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS GCA 72 bp | ATTGTCTCCCAGGAGCAGGCGGTCGATGTAGCCAGCTaGTCCTCCAGTACAATGAGGATACTTCCCCAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: IVSQEQAVDVAS*SSSTMRILPQV Trigger: GACTTGGGGAAGTATCCTCATTGTACTGGAGGAGCAGCTGGCTACATCGACCGCCTGCTCCTGGGAGACAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS CCA 72 bp | AGTTCTCCAACACCTCGTGGCCAACATACACCAGGATaGAGTTCATCCCTGGATAGAAGAAGGGGGTTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: SSPTPRGQHTPG*SSSLDRRRGFP Trigger: CGGGAACCCCCTTCTTCTATCCAGGGATGAACTCCATCCTGGTGTATGTTGGCCACGAGGTGTTGGAGAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS TCA 72 bp | AACTCAGCAAGAGCCTCAGGAGGGATACTGCGACGATaGGGGCTAAACCAACAAGGAATGCGATGCTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: NSARASGGILRR*GLNQQGMRCSQ Trigger: CTGTGAGCATCGCATTCCTTGTTGGTTTAGCCCTCATCGTCGCAGTATCCCTCCTGAGGCTCTTGCTGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS CAA 72 bp | ACCGTGAGAGACGTTCGCCAGTGGCTGGAAGGTGCATaGGTAACAGTCATCAGATTTCCAGTACACAGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: TVRDVRQWLEGA*VTVIRFPVHSQ Trigger: CTGACTGTGTACTGGAAATCTGATGACTGTTACCAATGCACCTTCCAGCCACTGGCGAACGTCTCTCACGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037609.8 ENSMUST00000211550.2 |
||
| CDS CAA 90 bp | AGGAATGCGATGCTCACAGGAAGGTTACTGTCCACTGGATTCTCATaGACGATGATGTCACAGGCAATTTTATTGGCCCCGCTGGAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RNAMLTGRLLSTGFS*TMMSQAILLAPLEA Trigger: TGCTTCCAGCGGGGCCAATAAAATTGCCTGTGACATCATCGTCAATGAGAATCCAGTGGACAGTAACCTTCCTGTGAGCATCGCATTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS GCA 72 bp | TCCAAATTCTCCAAATTTGTATTCCAGCCTGCAAGCTaGTCTCTCCTCCGAGGTGGAGTTAACCTGCAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SKFSKFVFQPAS*SLLRGGVNLQD Trigger: ATCCTGCAGGTTAACTCCACCTCGGAGGAGAGAGCAGCTTGCAGGCTGGAATACAAATTTGGAGAATTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037609.8 ENSMUST00000211550.2 |
||
| CDS CCA 72 bp | CAAGGATACAGCACCAGGCGGCAAATCGGGTCAGGATaGCTTTCGTCTGATCCTTGTAATACACCAGTATTT | + |
|
Preference number: 6 (lower is better) Translates to: QGYSTRRQIGSG*LSSDPCNTPVF Trigger: AAATACTGGTGTATTACAAGGATCAGACGAAAGCCATCCTGACCCGATTTGCCGCCTGGTGCTGTATCCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS TCA 72 bp | GAAGACGAGGTCGGCCACAGTCAGTCCGTTCCAACTTaGATGTTTGAAGTACCAATACTTTCCTCCTCCATA | + |
|
Preference number: 6 (lower is better) Translates to: EDEVGHSQSVPT*MFEVPILSSSI Trigger: TATGGAGGAGGAAAGTATTGGTACTTCAAACATTCAAGTTGGAACGGACTGACTGTGGCCGACCTCGTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS CCA 72 bp | CAGGACACCAGGGATCCGCACTTTATCCCAAGACAATaGACCAAGGCAATAATTGGGGTTGACAATGATAAC | + |
|
Preference number: 6 (lower is better) Translates to: QDTRDPHFIPRQ*TKAIIGVDNDN Trigger: GTTATCATTGTCAACCCCAATTATTGCCTTGGTCCATTGTCTTGGGATAAAGTGCGGATCCCTGGTGTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS CAA 72 bp | ATGCTCACAGGAAGGTTACTGTCCACTGGATTCTCATaGACGATGATGTCACAGGCAATTTTATTGGCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: MLTGRLLSTGFS*TMMSQAILLAP Trigger: CGGGGCCAATAAAATTGCCTGTGACATCATCGTCAATGAGAATCCAGTGGACAGTAACCTTCCTGTGAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037609.8 ENSMUST00000211550.2 |
||
| CDS CAA 90 bp | AGACGGTCAGTTTCTCGAGAAGCTATTGTCTTAGATATCCAGTTATaGACATCATCCAAACTCAGCAAGAGCCTCAGGAGGGATACTGCG | + |
|
Preference number: 6 (lower is better) Translates to: RRSVSREAIVLDIQL*TSSKLSKSLRRDTA Trigger: CGCAGTATCCCTCCTGAGGCTCTTGCTGAGTTTGGATGATGTCAATAACTGGATATCTAAGACAATAGCTTCTCGAGAAACTGACCGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS CCA 72 bp | AAGGAATGCGATGCTCACAGGAAGGTTACTGTCCACTaGATTCTCATTGACGATGATGTCACAGGCAATTTT | + |
|
Preference number: 6 (lower is better) Translates to: KECDAHRKVTVH*ILIDDDVTGNF Trigger: AAAATTGCCTGTGACATCATCGTCAATGAGAATCCAGTGGACAGTAACCTTCCTGTGAGCATCGCATTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS CAA 72 bp | GTTTCTCGAGAAGCTATTGTCTTAGATATCCAGTTATaGACATCATCCAAACTCAGCAAGAGCCTCAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: VSREAIVLDIQL*TSSKLSKSLRR Trigger: CCTCCTGAGGCTCTTGCTGAGTTTGGATGATGTCAATAACTGGATATCTAAGACAATAGCTTCTCGAGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||
| CDS CAA 90 bp | GCAAAGCAGCTCAGTGTGGTGACGTACGAGATGGACCAGAGATTCTaGTTTATTGGAATAAAACCTTCATTTGCAGACACTTTTGTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: AKQLSVVTYEMDQRF*FIGIKPSFADTFVN Trigger: GTTGACAAAAGTGTCTGCAAATGAAGGTTTTATTCCAATAAACAAGAATCTCTGGTCCATCTCGTACGTCACCACACTGAGCTGCTTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037609.8 |
||