Pregenerated sensors for HGFAC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029102Ensembl transcript IDs: ENSMUST00000030985.10, ENSMUST00000202573.2, ENSMUST00000202921.2
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TTGAGGCAGGGCCCAGAGGCACAAGGGTCAAGGATAGCTGGACCTTCCACAGGCGACTCGGTGAGCACCTaGCAGCCTGGGGCTGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: LRQGPEAQGSRIAGPSTGDSVST*QPGAGP Trigger: GGGCCCAGCCCCAGGCTGGCAGGTGCTCACCGAGTC...GCCTGTGGAAGGTCCAGCTATCCTTGACCCTTGTGCCTCTGGGCCCTGCCTCAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202573.2 |
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| CDS-3UTR TCA 90 bp | AGAGCAGTGGTAGGACCCATGGTCATGTGTACTGGAACATGTGCCCCCATTGAGGCTGCCCAGACTCGGTaGGCACCTGCCAGCCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: RAVVGPMVMCTGTCAPIEAAQTR*APASLG Trigger: CCCCAGGCTGGCAGGTGCTCACCGAGTCTGGGCAGC...CTCAATGGGGGCACATGTTCCAGTACACATGACCATGGGTCCTACCACTGCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000202573.2 |
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| CDS-3UTR GCA 90 bp | TGTGCCACAGTCCTTGCCTGTGAAGGCCAGCGGGCAAGAGCAGTGGTAGGACCCTACAGGAGTGCAGCATaGGGCCACCGTAGCGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: CATVLACEGQRARAVVGPYRSAA*GHRSGK Trigger: CTTTCCGCTACGGTGGCCGCATGCTGCACTCCTGTA...GGGTCCTACCACTGCTCTTGCCCGCTGGCCTTCACAGGCAAGGACTGTGGCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202573.2 |
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| CDS-3UTR GCA 90 bp | TTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCCCTTCCTTGGGGACCGGGAGGCAGGGTCACCTCTaGACAGTAGCCCCAGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: FIVGSRRGTMSIPSLGTGRQGHL*TVAPGP Trigger: CGGGCCTGGGGCTACTGTGCAGAGGTGACCCTGCCT...CCCGGTCCCCAAGGAAGGGATGCTCATAGTACCCCTTCTACTACCAACAATAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR TCA 90 bp | CAGGTCCTTGGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCGCTGCCCAGACTCGGTaGGCACTTGGCCCCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: QVLGDSFIVGSRRGTMSIAAQTR*ALGPQG Trigger: CCCCTGGGGGCCAAGTGCTCACCGAGTCTGGGCAGC...GATGCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTCTCCAAGGACCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR TCA 90 bp | TTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCCCTTCCTTGGGGACCGGGAACATGTGCCCCCATTaGGGCAGGGCCCAGAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: FIVGSRRGTMSIPSLGTGNMCPH*GRAQRH Trigger: GTGCCTCTGGGCCCTGCCTCAATGGGGGCACATGTT...CCCGGTCCCCAAGGAAGGGATGCTCATAGTACCCCTTCTACTACCAACAATAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR CCA 90 bp | TGTGAAGCCAGGTCCTTGGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTACCTGGGGGCTCTGTGTaGTTCCTGCCAGCCTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: CEARSLETVLLLVVEGVLPGGSV*FLPAWG Trigger: GCCCCAGGCTGGCAGGAACCACACAGAGCCCCCAGG...TAGTACCCCTTCTACTACCAACAATAAAACTGTCTCCAAGGACCTGGCTTCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR TCA 90 bp | AGCCAGGTCCTTGGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCGACAGCAGCAGCCACTaGGTCCACGTGCAGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: SQVLGDSFIVGSRRGTMSDSSSH*VHVQLL Trigger: CAGGAGCTGCACGTGGACTCAGTGGCTGCTGCTGTC...GCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTCTCCAAGGACCTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR CCA 90 bp | TTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCCCTTCCTTGGGGACCGGGAGACAAGCTGTGTGGTaGGTGTCTTCACACCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: FIVGSRRGTMSIPSLGTGRQAVW*VSSHRA Trigger: GGCCCGGTGTGAAGACACCCACCACACAGCTTGTCT...CCCGGTCCCCAAGGAAGGGATGCTCATAGTACCCCTTCTACTACCAACAATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR GCA 90 bp | AGCCAGGTCCTTGGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCGGCAGGCATCGGACTTaGAGTCGAAGTAGCCGGCAC | + |
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Preference number: 4 (lower is better) Translates to: SQVLGDSFIVGSRRGTMSGRHRT*SRSSRH Trigger: GTGCCGGCTACTTCGACTGCAAGTCCGATGCCTGCC...GCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTCTCCAAGGACCTGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR CCA 90 bp | GACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCCCTTCCTTGGGGGGCAGGTGCAGACGCTaGTCCCTGTGCCCACAATCA | + |
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Preference number: 4 (lower is better) Translates to: DSFIVGSRRGTMSIPSLGGRCRR*SLCPQS Trigger: TGATTGTGGGCACAGGGACCAGCGTCTGCACCTGCC...CCCCAAGGAAGGGATGCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR CCA 90 bp | TTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCCCTTCCTTGGGGACCGGGGGGCTGCTACACTTGTaGTCAGCAACAAGAGGGACC | + |
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Preference number: 4 (lower is better) Translates to: FIVGSRRGTMSIPSLGTGGLLHL*SATRGT Trigger: GGTCCCTCTTGTTGCTGACCACAAGTGTAGCAGCCC...CCCGGTCCCCAAGGAAGGGATGCTCATAGTACCCCTTCTACTACCAACAATAAA 52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR CCA 90 bp | CTTGGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCCCTTCCCCACCTGAGTCCCCCTaGCAGGCATCGGACTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: LGDSFIVGSRRGTMSIPSPPESP*QASDLQ Trigger: CTGCAAGTCCGATGCCTGCCAGGGGGACTCAGGTGG...GGAAGGGATGCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTCTCCAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR TCA 90 bp | GACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCCCTTCCTTGGGGGGCAGGCAGATGGGTTaGACAAACTGGGAGCGGACA | + |
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Preference number: 4 (lower is better) Translates to: DSFIVGSRRGTMSIPSLGGRQMG*TNWERT Trigger: TGTCCGCTCCCAGTTTGTTCAACCCATCTGCCTGCC...CCCCAAGGAAGGGATGCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR GCA 90 bp | CTTGGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCCCTTCCAGACGCTGGTCCCTGTaGCCACAATCAGGTGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LGDSFIVGSRRGTMSIPSRRWSL*PQSGGR Trigger: CCTGCCACCTGATTGTGGGCACAGGGACCAGCGTCT...GGAAGGGATGCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTCTCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR GCA 90 bp | CAGGTCCTTGGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCGGCGAAGCAGTGGGCTaGAGACACTACCCAGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: QVLGDSFIVGSRRGTMSIGEAVG*RHYPAG Trigger: ACCTGCTGGGTAGTGTCTGCAGCCCACTGCTTCGCC...GATGCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTCTCCAAGGACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR CCA 90 bp | TTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCCCTTCCTTGGGGACCGGGTGTAACGTTAGGTCCTaGGGGCTCTGTGTGGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: FIVGSRRGTMSIPSLGTGCNVRS*GLCVVP Trigger: AGGAACCACACAGAGCCCCCAGGACCTAACGTTACA...CCCGGTCCCCAAGGAAGGGATGCTCATAGTACCCCTTCTACTACCAACAATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR CCA 90 bp | CAGGTCCTTGGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCAGGATCTCCGGGGTTTaGGAGTGGACTCTGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: QVLGDSFIVGSRRGTMSIRISGV*EWTLAR Trigger: CCTGGCCAGAGTCCACTCCCAAACCCCGGAGATCCT...GATGCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTCTCCAAGGACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR CCA 90 bp | GACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCCCTTCCTTGGGGACTACCCAGCAGGTATaGACAAGGCTCCCGGCACAG | + |
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Preference number: 4 (lower is better) Translates to: DSFIVGSRRGTMSIPSLGTTQQV*TRLPAQ Trigger: CTGTGCCGGGAGCCTTGTCCATACCTGCTGGGTAGT...CCCCAAGGAAGGGATGCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR CCA 90 bp | GACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCCCTTCCTTGGGGACGGGTGTAGACTCCTaGCTTGTTGAGGCGCCCACA | + |
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Preference number: 4 (lower is better) Translates to: DSFIVGSRRGTMSIPSLGTGVDS*LVEAPT Trigger: TGTGGGCGCCTCAACAAGCCAGGAGTCTACACCCGT...CCCCAAGGAAGGGATGCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR GCA 90 bp | TGTGAAGCCAGGTCCTTGGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATACAGGAGTGCAGCATaGGGCCACCGTAGCGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: CEARSLETVLLLVVEGVLYRSAA*GHRSGK Trigger: CTTTCCGCTACGGTGGCCGCATGCTGCACTCCTGTA...TAGTACCCCTTCTACTACCAACAATAAAACTGTCTCCAAGGACCTGGCTTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR GCA 90 bp | CAGGTCCTTGGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCCAATCAGGTGGCAGGTaGCTCCGTTCAGACATGGGC | + |
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Preference number: 4 (lower is better) Translates to: QVLGDSFIVGSRRGTMSIQSGGR*LRSDMG Trigger: GCCCATGTCTGAACGGAGGCACCTGCCACCTGATTG...GATGCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTCTCCAAGGACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR GCA 90 bp | GACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCCCTTCCTTGGGGAACAAGAGGGACCAGTaGCTCCAGCAGGGAGTTGGA | + |
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Preference number: 4 (lower is better) Translates to: DSFIVGSRRGTMSIPSLGNKRDQ*LQQGVG Trigger: TCCAACTCCCTGCTGGAGGCACTGGTCCCTCTTGTT...CCCCAAGGAAGGGATGCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR CCA 90 bp | TGTGAAGCCAGGTCCTTGGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTAGTGCCCACAATCAGGTaGCAGGTGCCTCCGTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: CEARSLETVLLLVVEGVLVPTIR*QVPPFR Trigger: TCTGAACGGAGGCACCTGCCACCTGATTGTGGGCAC...TAGTACCCCTTCTACTACCAACAATAAAACTGTCTCCAAGGACCTGGCTTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR CCA 90 bp | GACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCCCTTCCTTGGGGCCTCTCATCCTTGTCTaGGTTCCGGCAGTAAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: DSFIVGSRRGTMSIPSLGPLILV*VPAVSV Trigger: CACGCTTACTGCCGGAACCCAGACAAGGATGAGAGG...CCCCAAGGAAGGGATGCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR TCA 90 bp | AGCCAGGTCCTTGGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCCATGGTTGTTGGGGTTaGACACCGAGTACAGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: SQVLGDSFIVGSRRGTMSHGCWG*TPSTGC Trigger: ACACCCTGTACTCGGTGTTCAACCCCAACAACCATG...GCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTCTCCAAGGACCTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR GCA 90 bp | GTCCTTGGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCCCTCATGTGGCCCCAGCCTaGAATCTGACACTTGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: VLGDSFIVGSRRGTMSIPHVAPA*NLTLVS Trigger: GGACACAAGTGTCAGATTGCAGGCTGGGGCCACATG...AGGGATGCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTCTCCAAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR CCA 90 bp | CTTGGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCCCTTCCAGGGTCAAGGATAGCTaGACCTTCCACAGGCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: LGDSFIVGSRRGTMSIPSRVKDS*TFHRQG Trigger: ACCCTGCCTGTGGAAGGTCCAGCTATCCTTGACCCT...GGAAGGGATGCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTCTCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR CCA 90 bp | CTTGGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCCCTTCCCTCAGACAAGCTGTGTaGTGGGTGTCTTCACACCGG | + |
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Preference number: 4 (lower is better) Translates to: LGDSFIVGSRRGTMSIPSLRQAV*WVSSHR Trigger: CCGGTGTGAAGACACCCACCACACAGCTTGTCTGAG...GGAAGGGATGCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTCTCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR CCA 90 bp | CAGGTCCTTGGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCGCCTCCGTTCAGACATaGGCTGCTCAGACAAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: QVLGDSFIVGSRRGTMSIASVQT*AAQTSC Trigger: ACAGCTTGTCTGAGCAGCCCATGTCTGAACGGAGGC...GATGCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTCTCCAAGGACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR CCA 90 bp | CTTGGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCCCTTCCTTTGGGAGTGGACTCTaGCCAGGGATTCACAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LGDSFIVGSRRGTMSIPSFGSGL*PGIHRL Trigger: CAGCCTGTGAATCCCTGGCCAGAGTCCACTCCCAAA...GGAAGGGATGCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTCTCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR CCA 90 bp | CAGGTCCTTGGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCGCCCCCGATGATGCGTaGTCTCAAGAACGTCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: QVLGDSFIVGSRRGTMSIAPDDA*SQERPL Trigger: AAGAGGACGTTCTTGAGACCACGCATCATCGGGGGC...GATGCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTCTCCAAGGACCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR CCA 90 bp | GTCCTTGGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCCCTCCTCAGGCAGGCAGATaGGTTGAACAAACTGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: VLGDSFIVGSRRGTMSIPPQAGR*VEQTGS Trigger: GCTCCCAGTTTGTTCAACCCATCTGCCTGCCTGAGG...AGGGATGCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTCTCCAAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR TCA 90 bp | TGTGAAGCCAGGTCCTTGGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTACGGTTGAAGAAGTGCTaGCCCAGTACCACTGTGATG | + |
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Preference number: 4 (lower is better) Translates to: CEARSLETVLLLVVEGVLRLKKC*PSTTVM Trigger: CATCACAGTGGTACTGGGTCAGCACTTCTTCAACCG...TAGTACCCCTTCTACTACCAACAATAAAACTGTCTCCAAGGACCTGGCTTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR GCA 90 bp | TTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCCCTTCCTTGGGGACCGGGTTTCCCAGGAAGCAGTaGTCTGTGGGAACAATGTTA | + |
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Preference number: 4 (lower is better) Translates to: FIVGSRRGTMSIPSLGTGFPRKQ*SVGTML Trigger: TAACATTGTTCCCACAGAGCACTGCTTCCTGGGAAA...CCCGGTCCCCAAGGAAGGGATGCTCATAGTACCCCTTCTACTACCAACAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR CCA 90 bp | CTTGGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCCCTTCCTATTCCCAATGTAGATaGCAGCCAGCCAGGGGTGTG | + |
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Preference number: 4 (lower is better) Translates to: LGDSFIVGSRRGTMSIPSYSQCR*QPARGV Trigger: CACACCCCTGGCTGGCTGCCATCTACATTGGGAATA...GGAAGGGATGCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTCTCCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR TCA 90 bp | AGCCAGGTCCTTGGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCTTTCTGTTGAGGTGCTaGCATTCCCAGAGATCACAG | + |
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Preference number: 4 (lower is better) Translates to: SQVLGDSFIVGSRRGTMSFLLRC*HSQRSQ Trigger: CTGTGATCTCTGGGAATGTCAGCACCTCAACAGAAA...GCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTCTCCAAGGACCTGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR TCA 90 bp | GTCCTTGGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCCCTTGGAGCACTTTCTGTTaGGGTGCTGACATTCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: VLGDSFIVGSRRGTMSIPWSTFC*GADIPR Trigger: TCTGGGAATGTCAGCACCTCAACAGAAAGTGCTCCA...AGGGATGCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTCTCCAAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR GCA 90 bp | CAGGTCCTTGGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCAACGTCCTCTTCTTGTaGCTCTTGCCACAGGTAGGA | + |
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Preference number: 4 (lower is better) Translates to: QVLGDSFIVGSRRGTMSINVLFL*LLPQVG Trigger: TCCTACCTGTGGCAAGAGGCACAAGAAGAGGACGTT...GATGCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTCTCCAAGGACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR CCA 90 bp | CTTGGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCCCTTCCCCTCCAGCAGGGAGTTaGAGTAGCTGCTCACATTTT | + |
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Preference number: 4 (lower is better) Translates to: LGDSFIVGSRRGTMSIPSPPAGS*SSCSHF Trigger: AAAATGTGAGCAGCTACTCCAACTCCCTGCTGGAGG...GGAAGGGATGCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTCTCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR CCA 90 bp | GTCCTTGGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCCCTAGCACCATATACCTCTaGGCTGCTACACTTGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: VLGDSFIVGSRRGTMSIPSTIYL*AATLVV Trigger: GACCACAAGTGTAGCAGCCCAGAGGTATATGGTGCT...AGGGATGCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTCTCCAAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR CCA 90 bp | CAGGTCCTTGGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCTCCAGTCCACATAATTaGCCACACGGGTGTAGACTC | + |
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Preference number: 4 (lower is better) Translates to: QVLGDSFIVGSRRGTMSISSPHN*PHGCRL Trigger: GAGTCTACACCCGTGTGGCCAATTATGTGGACTGGA...GATGCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTCTCCAAGGACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR TCA 90 bp | GTCCTTGGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCCCTGTCGAATACGGTCGTTaGTCCAGTCCACATAATTGG | + |
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Preference number: 4 (lower is better) Translates to: VLGDSFIVGSRRGTMSIPVEYGR*SSPHNW Trigger: CCAATTATGTGGACTGGATCAACGACCGTATTCGAC...AGGGATGCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTCTCCAAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR GCA 90 bp | TTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCCCTTCCTTGGGGACCGGGGCACATACTTCTCAATaGCAAATGTCTGTGTCACAT | + |
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Preference number: 4 (lower is better) Translates to: FIVGSRRGTMSIPSLGTGAHTSQ*QMSVSH Trigger: ATGTGACACAGACATTTGGCATTGAGAAGTATGTGC...CCCGGTCCCCAAGGAAGGGATGCTCATAGTACCCCTTCTACTACCAACAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR CCA 90 bp | CTTGGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCCCTTCCGGAAGCAGTGCTCTGTaGGAACAATGTTACAGAACC | + |
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Preference number: 4 (lower is better) Translates to: LGDSFIVGSRRGTMSIPSGSSAL*EQCYRT Trigger: GGTTCTGTAACATTGTTCCCACAGAGCACTGCTTCC...GGAAGGGATGCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTCTCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR CCA 90 bp | AGCCAGGTCCTTGGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCAAGACAAGGTCATaGTTGTTGGGGTTGAACACC | + |
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Preference number: 4 (lower is better) Translates to: SQVLGDSFIVGSRRGTMSIKTRS*LLGLNT Trigger: GGTGTTCAACCCCAACAACCATGACCTTGTCTTGAT...GCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTCTCCAAGGACCTGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR GCA 90 bp | GGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCCCTTCCTTGGGGAGTTGGAGTAGCTaGTCACATTTTCATCCATGT | + |
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Preference number: 4 (lower is better) Translates to: GDSFIVGSRRGTMSIPSLGSWSS*SHFHPC Trigger: ACATGGATGAAAATGTGAGCAGCTACTCCAACTCCC...CAAGGAAGGGATGCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS GCA 90 bp | GCAGGTCAGAATTCCAGGCCAGGCAGCTCAGGCCCGAGGCAGCGGTaGTGGCCACGCCTCGGTACTCTGTACCATTTCCCAGGAAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: AGQNSRPGSSGPRQR*WPRLGTLYHFPGSS Trigger: ACTGCTTCCTGGGAAATGGTACAGAGTACCGAGGCGTGGCCAGCACCGCTGCCTCGGGCCTGAGCTGCCTGGCCTGGAATTCTGACCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030985.10 ENSMUST00000202921.2 |
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| CDS CCA 90 bp | CCCAACGGGCAGGTGCAGACGCTGGTCCCTGTGCCCACAATCAGGTaGCAGGTGCCTCCGTTCAGACATGGGCTGCTCAGACAAGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: PNGQVQTLVPVPTIR*QVPPFRHGLLRQAV Trigger: CACAGCTTGTCTGAGCAGCCCATGTCTGAACGGAGGCACCTGCCACCTGATTGTGGGCACAGGGACCAGCGTCTGCACCTGCCCGTTGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS GCA 90 bp | GATGAGCCCCCGATGATGCGTGGTCTCAAGAACGTCCTCTTCTTGTaGCTCTTGCCACAGGTAGGACGCACAGCCGGGGCTGACTCGGGC | + |
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Preference number: 5 (lower is better) Translates to: DEPPMMRGLKNVLFL*LLPQVGRTAGADSG Trigger: GCCCGAGTCAGCCCCGGCTGTGCGTCCTACCTGTGGCAAGAGGCACAAGAAGAGGACGTTCTTGAGACCACGCATCATCGGGGGCTCATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030985.10 ENSMUST00000202921.2 |
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| CDS GCA 90 bp | ACCACTTCCTGTAGGCACTTCCCTCAGAGGTACAGGAGTGCAGCATaGGGCCACCGTAGCGGAAAGGGAACCTGCACGGCTGCCCAGACT | + |
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Preference number: 5 (lower is better) Translates to: TTSCRHFPQRYRSAA*GHRSGKGTCTAAQT Trigger: AGTCTGGGCAGCCGTGCAGGTTCCCTTTCCGCTACGGTGGCCGCATGCTGCACTCCTGTACCTCTGAGGGAAGTGCCTACAGGAAGTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030985.10 ENSMUST00000202573.2 |
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| CDS CCA 90 bp | TGGCAGGTGCCTCCGTTCAGACATGGGCTGCTCAGACAAGCTGTGTaGTGGGTGTCTTCACACCGGGCCTGGCCCTCCATACAGCCACAT | + |
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Preference number: 5 (lower is better) Translates to: WQVPPFRHGLLRQAV*WVSSHRAWPSIQPH Trigger: ATGTGGCTGTATGGAGGGCCAGGCCCGGTGTGAAGACACCCACCACACAGCTTGTCTGAGCAGCCCATGTCTGAACGGAGGCACCTGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS TCA 90 bp | CAGCCAGCCAGGGGTGTGAGCCAGGCAAAGATGATGAGCCCCCGATaGTGCGTGGTCTCAAGAACGTCCTCTTCTTGTGCCTCTTGCCAC | + |
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Preference number: 5 (lower is better) Translates to: QPARGVSQAKMMSPR*CVVSRTSSSCASCH Trigger: GTGGCAAGAGGCACAAGAAGAGGACGTTCTTGAGACCACGCATCATCGGGGGCTCATCATCTTTGCCTGGCTCACACCCCTGGCTGGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030985.10 ENSMUST00000202921.2 |
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| CDS GCA 90 bp | CCAGCCTGCAATCTGACACTTGTGTCCAGTAGGGAAGGAGCTGCCTaGCTCAGGCAGGCAGATGGGTTGAACAAACTGGGAGCGGACAGC | + |
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Preference number: 5 (lower is better) Translates to: PACNLTLVSSREGAA*LRQADGLNKLGADS Trigger: GCTGTCCGCTCCCAGTTTGTTCAACCCATCTGCCTGCCTGAGGCAGGCAGCTCCTTCCCTACTGGACACAAGTGTCAGATTGCAGGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS GCA 90 bp | ACAAGGGTCAAGGATAGCTGGACCTTCCACAGGCAGGGTCACCTCTaGACAGTAGCCCCAGGCCCGGTCTCGGTCATAGTTGTGTGTTGT | + |
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Preference number: 5 (lower is better) Translates to: TRVKDSWTFHRQGHL*TVAPGPVSVIVVCC Trigger: ACAACACACAACTATGACCGAGACCGGGCCTGGGGCTACTGTGCAGAGGTGACCCTGCCTGTGGAAGGTCCAGCTATCCTTGACCCTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS GCA 90 bp | GGCCAGGGATTCACAGGCTGTCAGGCGGCAATACTCCCACGACAGTaGGTTGTCCTTCACCACATAGCACCAAGGCCTCTCATCCTTGTC | + |
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Preference number: 5 (lower is better) Translates to: GQGFTGCQAAILPRQ*VVLHHIAPRPLILV Trigger: GACAAGGATGAGAGGCCTTGGTGCTATGTGGTGAAGGACAACGCACTGTCGTGGGAGTATTGCCGCCTGACAGCCTGTGAATCCCTGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030985.10 ENSMUST00000202921.2 |
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| CDS CCA 90 bp | CCACGCCTCGGTACTCTGTACCATTTCCCAGGAAGCAGTGCTCTGTaGGAACAATGTTACAGAACCGCCCAGCATAGCCCAACGGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: PRLGTLYHFPGSSAL*EQCYRTAQHSPTGR Trigger: CCTGCCCGTTGGGCTATGCTGGGCGGTTCTGTAACATTGTTCCCACAGAGCACTGCTTCCTGGGAAATGGTACAGAGTACCGAGGCGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS CCA 90 bp | AGGTATGGACAAGGCTCCCGGCACAGAAGCTATTCCCAATGTAGATaGCAGCCAGCCAGGGGTGTGAGCCAGGCAAAGATGATGAGCCCC | + |
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Preference number: 5 (lower is better) Translates to: RYGQGSRHRSYSQCR*QPARGVSQAKMMSP Trigger: GGGGCTCATCATCTTTGCCTGGCTCACACCCCTGGCTGGCTGCCATCTACATTGGGAATAGCTTCTGTGCCGGGAGCCTTGTCCATACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030985.10 ENSMUST00000202921.2 |
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| CDS CCA 90 bp | TTAGGGCTGATGTCAGCACCATATACCTCTGGGCTGCTACACTTGTaGTCAGCAACAAGAGGGACCAGTGCCTCCAGCAGGGAGTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: LGLMSAPYTSGLLHL*SATRGTSASSRELE Trigger: CTCCAACTCCCTGCTGGAGGCACTGGTCCCTCTTGTTGCTGACCACAAGTGTAGCAGCCCAGAGGTATATGGTGCTGACATCAGCCCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR CAA 90 bp | TTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCCCTTCCTTGGGGACCGGGGAACATGTGCCCCCATaGAGGCAGGGCCCAGAGGCA | + |
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Preference number: 5 (lower is better) Translates to: FIVGSRRGTMSIPSLGTGEHVPP*RQGPEA Trigger: TGCCTCTGGGCCCTGCCTCAATGGGGGCACATGTTC...CCCGGTCCCCAAGGAAGGGATGCTCATAGTACCCCTTCTACTACCAACAATAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR CAA 90 bp | TTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCCCTTCCTTGGGGACCGGGTCTGTGCCACAGTCCTaGCCTGTGAAGGCCAGCGGG | + |
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Preference number: 5 (lower is better) Translates to: FIVGSRRGTMSIPSLGTGSVPQS*PVKASG Trigger: CCCGCTGGCCTTCACAGGCAAGGACTGTGGCACAGA...CCCGGTCCCCAAGGAAGGGATGCTCATAGTACCCCTTCTACTACCAACAATAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS GCA 90 bp | TACCTCTGGGCTGCTACACTTGTGGTCAGCAACAAGAGGGACCAGTaGCTCCAGCAGGGAGTTGGAGTAGCTGCTCACATTTTCATCCAT | + |
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Preference number: 5 (lower is better) Translates to: YLWAATLVVSNKRDQ*LQQGVGVAAHIFIH Trigger: ATGGATGAAAATGTGAGCAGCTACTCCAACTCCCTGCTGGAGGCACTGGTCCCTCTTGTTGCTGACCACAAGTGTAGCAGCCCAGAGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR CAA 90 bp | TTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCCCTTCCTTGGGGACCGGGCTCTTCTTGTGCCTCTaGCCACAGGTAGGACGCACA | + |
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Preference number: 5 (lower is better) Translates to: FIVGSRRGTMSIPSLGTGLFLCL*PQVGRT Trigger: TGTGCGTCCTACCTGTGGCAAGAGGCACAAGAAGAG...CCCGGTCCCCAAGGAAGGGATGCTCATAGTACCCCTTCTACTACCAACAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR CAA 90 bp | GACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCCCTTCCTTGGGGAGGGTACCTCTCACTTaGGGGTCCCTCAGTCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: DSFIVGSRRGTMSIPSLGRVPLT*GSLSLC Trigger: GCAGAGACTGAGGGACCCCAAAGTGAGAGGTACCCT...CCCCAAGGAAGGGATGCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR CAA 90 bp | TGTGAAGCCAGGTCCTTGGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTAAGGCAGGCAGATGGGTaGAACAAACTGGGAGCGGAC | + |
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Preference number: 5 (lower is better) Translates to: CEARSLETVLLLVVEGVLRQADG*NKLGAD Trigger: GTCCGCTCCCAGTTTGTTCAACCCATCTGCCTGCCT...TAGTACCCCTTCTACTACCAACAATAAAACTGTCTCCAAGGACCTGGCTTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS TCA 90 bp | CCTTCTTCTTTAGCCGGATCAAGACAAGGTCATGGTTGTTGGGGTTaGACACCGAGTACAGGGTGTAGGGCACATACTTCTCAATGCCAA | + |
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Preference number: 5 (lower is better) Translates to: PSSLAGSRQGHGCWG*TPSTGCRAHTSQCQ Trigger: TTGGCATTGAGAAGTATGTGCCCTACACCCTGTACTCGGTGTTCAACCCCAACAACCATGACCTTGTCTTGATCCGGCTAAAGAAGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030985.10 ENSMUST00000202921.2 |
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| CDS-3UTR CAA 90 bp | AGCCAGGTCCTTGGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCTCATGGTTGTTGGGGTaGAACACCGAGTACAGGGTG | + |
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Preference number: 5 (lower is better) Translates to: SQVLGDSFIVGSRRGTMSSWLLG*NTEYRV Trigger: CACCCTGTACTCGGTGTTCAACCCCAACAACCATGA...GCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTCTCCAAGGACCTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR CAA 90 bp | GTCCTTGGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCCCTTCTGGGCTGCTACACTaGTGGTCAGCAACAAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: VLGDSFIVGSRRGTMSIPSGLLH*WSATRG Trigger: CCCTCTTGTTGCTGACCACAAGTGTAGCAGCCCAGA...AGGGATGCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTCTCCAAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR CAA 90 bp | AGCCAGGTCCTTGGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCACAAGGTCATGGTTGTaGGGGTTGAACACCGAGTAC | + |
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Preference number: 5 (lower is better) Translates to: SQVLGDSFIVGSRRGTMSTRSWL*GLNTEY Trigger: GTACTCGGTGTTCAACCCCAACAACCATGACCTTGT...GCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTCTCCAAGGACCTGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR CAA 90 bp | CTTGGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCCCTTCCAAGAACGTCCTCTTCTaGTGCCTCTTGCCACAGGTA | + |
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Preference number: 5 (lower is better) Translates to: LGDSFIVGSRRGTMSIPSKNVLF*CLLPQV Trigger: TACCTGTGGCAAGAGGCACAAGAAGAGGACGTTCTT...GGAAGGGATGCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTCTCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS-3UTR CAA 90 bp | CAGGTCCTTGGAGACAGTTTTATTGTTGGTAGTAGAAGGGGTACTATGAGCATCAAGACAAGGTCATGGTaGTTGGGGTTGAACACCGAG | + |
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Preference number: 5 (lower is better) Translates to: QVLGDSFIVGSRRGTMSIKTRSW*LGLNTE Trigger: CTCGGTGTTCAACCCCAACAACCATGACCTTGTCTT...GATGCTCATAGTACCCCTTCTACTACCAACAATAAAACTGTCTCCAAGGACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS CCA 72 bp | TCCAGGCCAGGCAGCTCAGGCCCGAGGCAGCGGTGCTaGCCACGCCTCGGTACTCTGTACCATTTCCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: SRPGSSGPRQRC*PRLGTLYHFPG Trigger: TCCTGGGAAATGGTACAGAGTACCGAGGCGTGGCCAGCACCGCTGCCTCGGGCCTGAGCTGCCTGGCCTGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030985.10 ENSMUST00000202921.2 |
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| CDS GCA 72 bp | AATTCCAGGCCAGGCAGCTCAGGCCCGAGGCAGCGGTaGTGGCCACGCCTCGGTACTCTGTACCATTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: NSRPGSSGPRQR*WPRLGTLYHFP Trigger: TGGGAAATGGTACAGAGTACCGAGGCGTGGCCAGCACCGCTGCCTCGGGCCTGAGCTGCCTGGCCTGGAATT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030985.10 ENSMUST00000202921.2 |
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| CDS CCA 72 bp | GCTGACTCGGGCAGGGCTGCTAGGATCTCCGGGGTTTaGGAGTGGACTCTGGCCAGGGATTCACAGGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: ADSGRAARISGV*EWTLARDSQAV Trigger: GACAGCCTGTGAATCCCTGGCCAGAGTCCACTCCCAAACCCCGGAGATCCTAGCAGCCCTGCCCGAGTCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030985.10 ENSMUST00000202921.2 |
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| CDS CAA 72 bp | GTCTTCACACCGGGCCTGGCCCTCCATACAGCCACATaGCTCCACATGTCCCTCGCTCACACGGGCCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: VFTPGLALHTAT*LHMSLAHTGPV Trigger: CACTGGGCCCGTGTGAGCGAGGGACATGTGGAGCAATGTGGCTGTATGGAGGGCCAGGCCCGGTGTGAAGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS CAA 90 bp | CCCCCGATGATGCGTGGTCTCAAGAACGTCCTCTTCTTGTGCCTCTaGCCACAGGTAGGACGCACAGCCGGGGCTGACTCGGGCAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: PPMMRGLKNVLFLCL*PQVGRTAGADSGRA Trigger: AGCCCTGCCCGAGTCAGCCCCGGCTGTGCGTCCTACCTGTGGCAAGAGGCACAAGAAGAGGACGTTCTTGAGACCACGCATCATCGGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030985.10 ENSMUST00000202921.2 |
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| CDS GCA 72 bp | TGTAGGCACTTCCCTCAGAGGTACAGGAGTGCAGCATaGGGCCACCGTAGCGGAAAGGGAACCTGCACGGCT | + |
|
Preference number: 6 (lower is better) Translates to: CRHFPQRYRSAA*GHRSGKGTCTA Trigger: AGCCGTGCAGGTTCCCTTTCCGCTACGGTGGCCGCATGCTGCACTCCTGTACCTCTGAGGGAAGTGCCTACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030985.10 ENSMUST00000202573.2 |
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| CDS CCA 72 bp | GAGGCAGGGCCCAGAGGCACAAGGGTCAAGGATAGCTaGACCTTCCACAGGCAGGGTCACCTCTGCACAGTA | + |
|
Preference number: 6 (lower is better) Translates to: EAGPRGTRVKDS*TFHRQGHLCTV Trigger: TACTGTGCAGAGGTGACCCTGCCTGTGGAAGGTCCAGCTATCCTTGACCCTTGTGCCTCTGGGCCCTGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS CAA 72 bp | CCCCCGATGATGCGTGGTCTCAAGAACGTCCTCTTCTaGTGCCTCTTGCCACAGGTAGGACGCACAGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: PPMMRGLKNVLF*CLLPQVGRTAG Trigger: CCCGGCTGTGCGTCCTACCTGTGGCAAGAGGCACAAGAAGAGGACGTTCTTGAGACCACGCATCATCGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030985.10 ENSMUST00000202921.2 |
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| CDS CAA 90 bp | GATGATGAGCCCCCGATGATGCGTGGTCTCAAGAACGTCCTCTTCTaGTGCCTCTTGCCACAGGTAGGACGCACAGCCGGGGCTGACTCG | + |
|
Preference number: 6 (lower is better) Translates to: DDEPPMMRGLKNVLF*CLLPQVGRTAGADS Trigger: CGAGTCAGCCCCGGCTGTGCGTCCTACCTGTGGCAAGAGGCACAAGAAGAGGACGTTCTTGAGACCACGCATCATCGGGGGCTCATCATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030985.10 ENSMUST00000202921.2 |
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| CDS GCA 72 bp | CCGATGATGCGTGGTCTCAAGAACGTCCTCTTCTTGTaGCTCTTGCCACAGGTAGGACGCACAGCCGGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: PMMRGLKNVLFL*LLPQVGRTAGA Trigger: AGCCCCGGCTGTGCGTCCTACCTGTGGCAAGAGGCACAAGAAGAGGACGTTCTTGAGACCACGCATCATCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030985.10 ENSMUST00000202921.2 |
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| CDS CCA 72 bp | AGACAAGCTGTGTGGTGGGTGTCTTCACACCGGGCCTaGCCCTCCATACAGCCACATTGCTCCACATGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: RQAVWWVSSHRA*PSIQPHCSTCP Trigger: GGGACATGTGGAGCAATGTGGCTGTATGGAGGGCCAGGCCCGGTGTGAAGACACCCACCACACAGCTTGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS CAA 72 bp | ATGCGTGGTCTCAAGAACGTCCTCTTCTTGTGCCTCTaGCCACAGGTAGGACGCACAGCCGGGGCTGACTCG | + |
|
Preference number: 6 (lower is better) Translates to: MRGLKNVLFLCL*PQVGRTAGADS Trigger: CGAGTCAGCCCCGGCTGTGCGTCCTACCTGTGGCAAGAGGCACAAGAAGAGGACGTTCTTGAGACCACGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030985.10 ENSMUST00000202921.2 |
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| CDS CCA 72 bp | GCGAAGCAGTGGGCTGCAGACACTACCCAGCAGGTATaGACAAGGCTCCCGGCACAGAAGCTATTCCCAATG | + |
|
Preference number: 6 (lower is better) Translates to: AKQWAADTTQQV*TRLPAQKLFPM Trigger: CATTGGGAATAGCTTCTGTGCCGGGAGCCTTGTCCATACCTGCTGGGTAGTGTCTGCAGCCCACTGCTTCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030985.10 ENSMUST00000202921.2 |
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| CDS CCA 72 bp | CAGCAACAAGAGGGACCAGTGCCTCCAGCAGGGAGTTaGAGTAGCTGCTCACATTTTCATCCATGTGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: QQQEGPVPPAGS*SSCSHFHPCGP Trigger: GGGGCCACATGGATGAAAATGTGAGCAGCTACTCCAACTCCCTGCTGGAGGCACTGGTCCCTCTTGTTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS GCA 72 bp | GCTGCTACACTTGTGGTCAGCAACAAGAGGGACCAGTaGCTCCAGCAGGGAGTTGGAGTAGCTGCTCACATT | + |
|
Preference number: 6 (lower is better) Translates to: AATLVVSNKRDQ*LQQGVGVAAHI Trigger: AATGTGAGCAGCTACTCCAACTCCCTGCTGGAGGCACTGGTCCCTCTTGTTGCTGACCACAAGTGTAGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS CAA 90 bp | ATGTTAGGGCTGATGTCAGCACCATATACCTCTGGGCTGCTACACTaGTGGTCAGCAACAAGAGGGACCAGTGCCTCCAGCAGGGAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: MLGLMSAPYTSGLLH*WSATRGTSASSREL Trigger: CAACTCCCTGCTGGAGGCACTGGTCCCTCTTGTTGCTGACCACAAGTGTAGCAGCCCAGAGGTATATGGTGCTGACATCAGCCCTAACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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| CDS CCA 72 bp | GGTACTCTGTACCATTTCCCAGGAAGCAGTGCTCTGTaGGAACAATGTTACAGAACCGCCCAGCATAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GTLYHFPGSSAL*EQCYRTAQHSP Trigger: TGGGCTATGCTGGGCGGTTCTGTAACATTGTTCCCACAGAGCACTGCTTCCTGGGAAATGGTACAGAGTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030985.10 |
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