Pregenerated sensors for HGF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028864Ensembl transcript IDs: ENSMUST00000030683.8, ENSMUST00000196645.2, ENSMUST00000199581.5
Found 164 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGTTGTTCTAGGATTGTTTTAGGTGACATTTTGATCCTGAAGTCTTaGAAATCCTCATGTATCCATGGATGCTTCAAACACACTGGCCTC | + |
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Preference number: 1 (lower is better) Translates to: SCSRIVLGDILILKS*KSSCIHGCFKHTGL Trigger: GAGGCCAGTGTGTTTGAAGCATCCATGGATACATGAGGATTTCCAAGACTTCAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| 3UTR CAA 90 bp | TCACAACACTCAAGTAGTTGTTCTAGGATTGTTTTAGGTGACATTTaGATCCTGAAGTCTTGGAAATCCTCATGTATCCATGGATGCTTC | + |
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Preference number: 2 (lower is better) Translates to: SQHSSSCSRIVLGDI*ILKSWKSSCIHGCF Trigger: GAAGCATCCATGGATACATGAGGATTTCCAAGACTTCAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACTACTTGAGTGTTGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| 3UTR CCA 72 bp | TTTGATCCTGAAGTCTTGGAAATCCTCATGTATCCATaGATGCTTCAAACACACTGGCCTCTTCTATGGCTA | + |
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Preference number: 3 (lower is better) Translates to: FDPEVLEILMYP*MLQTHWPLLWL Trigger: TAGCCATAGAAGAGGCCAGTGTGTTTGAAGCATCCATGGATACATGAGGATTTCCAAGACTTCAGGATCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| 3UTR-3UTR CAA 90 bp | TCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACTTGTTTGATCCTGAAGTCTaGGAAATCCTCATGTATCCA | + |
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Preference number: 3 (lower is better) Translates to: SSIFRRYVTALAGTLIHLFDPEV*EILMYP Trigger: TGGATACATGAGGATTTCCAAGACTTCAGGATCAAA...CAAGTGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| 3UTR-3UTR CAA 90 bp | TATGTTACTGCACTTGCAGGTACCTTAATTCACTTGAACATTTACAAAGGACACTTTGATCCTGAAGTCTaGGAAATCCTCATGTATCCA | + |
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Preference number: 3 (lower is better) Translates to: YVTALAGTLIHLNIYKGHFDPEV*EILMYP Trigger: TGGATACATGAGGATTTCCAAGACTTCAGGATCAAA...GTGTCCTTTGTAAATGTTCAAGTGAATTAAGGTACCTGCAAGTGCAGTAACATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| 3UTR GCA 72 bp | TCATTCAAGTATCTTCAGGAGATATGTTACTGCACTTaGAGGTACCTTAATTCACTTGAACATTTACAAAGG | + |
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Preference number: 3 (lower is better) Translates to: SFKYLQEICYCT*RYLNSLEHLQR Trigger: CCTTTGTAAATGTTCAAGTGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGAATGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CCA 90 bp | CATGTGCTTTCCTCCATTGATGTTTGTGTGCCAGTATTTAGAGGATACATCTTGGAACTTGTGCCGGTGTaGTGTCTGCTGGTCCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: HVLSSIDVCVPVFRGYILELVPV*CLLVPA Trigger: CGCTGGGACCAGCAGACACCACACCGGCACAAGTTC...CAAGATGTATCCTCTAAATACTGGCACACAAACATCAATGGAGGAAAGCACATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199581.5 |
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| CDS-3UTR GCA 90 bp | CATGTGCTTTCCTCCATTGATGTTTGTGTGCCAGTATTTAGAGGATACATCTTGTGCAGGAGGACATGCTaGAGCAACAGGACCGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: HVLSSIDVCVPVFRGYILCRRTC*SNRTGR Trigger: TCTGCCGGTCCTGTTGCTGCAGCATGTCCTCCTGCA...CAAGATGTATCCTCTAAATACTGGCACACAAACATCAATGGAGGAAAGCACATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199581.5 |
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| CDS-3UTR GCA 90 bp | CATTCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACTGCAGGAGGACATGCTaGAGCAACAGGACCGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: HSSIFRRYVTALAGTLIHCRRTC*SNRTGR Trigger: TCTGCCGGTCCTGTTGCTGCAGCATGTCCTCCTGCA...GTGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGAATG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR GCA 90 bp | AGTTGTTCTAGGATTGTTTTAGGTGACATTTTGATCCTGAAGTCTTGGAAATCCAGGTGCAGGAGGACATaGTGCAGCAACAGGACCGGC | + |
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Preference number: 4 (lower is better) Translates to: SCSRIVLGDILILKSWKSRCRRT*CSNRTG Trigger: GCCGGTCCTGTTGCTGCAGCATGTCCTCCTGCACCT...GGATTTCCAAGACTTCAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR GCA 90 bp | TATGTTACTGCACTTGCAGGTACCTTAATTCACTTGAACATTTACAAAGGACACAGGTGCAGGAGGACATaGTGCAGCAACAGGACCGGC | + |
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Preference number: 4 (lower is better) Translates to: YVTALAGTLIHLNIYKGHRCRRT*CSNRTG Trigger: GCCGGTCCTGTTGCTGCAGCATGTCCTCCTGCACCT...GTGTCCTTTGTAAATGTTCAAGTGAATTAAGGTACCTGCAAGTGCAGTAACATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CCA 90 bp | TCATTCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCAGAACTTGTGCCGGTGTaGTGTCTGCTGGTCCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SFKYLQEICYCTCRYLNSELVPV*CLLVPA Trigger: CGCTGGGACCAGCAGACACCACACCGGCACAAGTTC...TGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR GCA 90 bp | TCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACTTGTCTGGCAAGAACTTGTaGCGGTGTGGTGTCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SSIFRRYVTALAGTLIHLSGKNL*RCGVCW Trigger: CCAGCAGACACCACACCGGCACAAGTTCTTGCCAGA...CAAGTGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR GCA 90 bp | CATTCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACACCATGGCCTCGGCTTaGCATCAGGATTGCGGCAAT | + |
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Preference number: 4 (lower is better) Translates to: HSSIFRRYVTALAGTLIHTMASA*HQDCGN Trigger: ATTGCCGCAATCCTGATGGCAAGCCGAGGCCATGGT...GTGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGAATG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR TCA 90 bp | TCACAACACTCAAGTAGTTGTTCTAGGATTGTTTTAGGTGACATTTTGATCCTGCCTCTGGATTGCTTGTaGAACACCAGGGTCCCCCTT | + |
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Preference number: 4 (lower is better) Translates to: SQHSSSCSRIVLGDILILPLDCL*NTRVPL Trigger: AAGGGGGACCCTGGTGTTTCACAAGCAATCCAGAGG...CAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACTACTTGAGTGTTGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR TCA 90 bp | AGTTGTTCTAGGATTGTTTTAGGTGACATTTTGATCCTGAAGTCTTGGAAATCCTGCTGGTCCCAGCGCTaGCAAGTCTTGCCTGATTCT | + |
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Preference number: 4 (lower is better) Translates to: SCSRIVLGDILILKSWKSCWSQR*QVLPDS Trigger: AGAATCAGGCAAGACTTGTCAGCGCTGGGACCAGCA...GGATTTCCAAGACTTCAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR TCA 90 bp | TCAAGTAGTTGTTCTAGGATTGTTTTAGGTGACATTTTGATCCTGAAGTCTTGGTGCTGGTCCCAGCGCTaGCAAGTCTTGCCTGATTCT | + |
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Preference number: 4 (lower is better) Translates to: SSSCSRIVLGDILILKSWCWSQR*QVLPDS Trigger: AGAATCAGGCAAGACTTGTCAGCGCTGGGACCAGCA...CCAAGACTTCAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACTACTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR GCA 90 bp | TCAAGTAGTTGTTCTAGGATTGTTTTAGGTGACATTTTGATCCTGAAGTCTTGGTCTGGCAAGAACTTGTaGCGGTGTGGTGTCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSCSRIVLGDILILKSWSGKNL*RCGVCW Trigger: CCAGCAGACACCACACCGGCACAAGTTCTTGCCAGA...CCAAGACTTCAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACTACTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR GCA 90 bp | TCTGAACACTCACAACACTCAAGTAGTTGTTCTAGGATTGTTTTAGGTGACATTACCATGGCCTCGGCTTaGCATCAGGATTGCGGCAAT | + |
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Preference number: 4 (lower is better) Translates to: SEHSQHSSSCSRIVLGDITMASA*HQDCGN Trigger: ATTGCCGCAATCCTGATGGCAAGCCGAGGCCATGGT...AATGTCACCTAAAACAATCCTAGAACAACTACTTGAGTGTTGTGAGTGTTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CCA 90 bp | CATTCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACCAGGACGATTTGGGATaGCACATCCACGACCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: HSSIFRRYVTALAGTLIHQDDLG*HIHDQE Trigger: TTCCTGGTCGTGGATGTGCCATCCCAAATCGTCCTG...GTGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR TCA 90 bp | TCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACTTGTGCGAATCCCAACGCTaGCAGGGAATTCCATTCCAA | + |
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Preference number: 4 (lower is better) Translates to: SSIFRRYVTALAGTLIHLCESQR*QGIPFQ Trigger: TTGGAATGGAATTCCCTGTCAGCGTTGGGATTCGCA...CAAGTGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CCA 90 bp | TCAAGTAGTTGTTCTAGGATTGTTTTAGGTGACATTTTGATCCTGAAGTCTTGGCTTCTGCATAGGGGATaGCGACATGAAGCAGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: SSSCSRIVLGDILILKSWLLHRG*RHEAGG Trigger: TCCTCCTGCTTCATGTCGCCATCCCCTATGCAGAAG...CCAAGACTTCAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACTACTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CCA 90 bp | TCATTCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACTTCTGCATAGGGGATaGCGACATGAAGCAGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: SFKYLQEICYCTCRYLNSLLHRG*RHEAGG Trigger: TCCTCCTGCTTCATGTCGCCATCCCCTATGCAGAAG...TGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CCA 90 bp | TCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACTTGAATACCAGGACGATTTaGGATGGCACATCCACGACC | + |
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Preference number: 4 (lower is better) Translates to: SSIFRRYVTALAGTLIHLNTRTI*DGTSTT Trigger: GGTCGTGGATGTGCCATCCCAAATCGTCCTGGTATT...CAAGTGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR TCA 90 bp | CATGTGCTTTCCTCCATTGATGTTTGTGTGCCAGTATTTAGAGGATACATCTTGTCATTCACAGCACTGTaGGCGCACGTTTTAATTGCA | + |
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Preference number: 4 (lower is better) Translates to: HVLSSIDVCVPVFRGYILSFTAL*AHVLIA Trigger: TGCAATTAAAACGTGCGCTCACAGTGCTGTGAATGA...CAAGATGTATCCTCTAAATACTGGCACACAAACATCAATGGAGGAAAGCACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199581.5 |
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| CDS-3UTR TCA 90 bp | TATGTTACTGCACTTGCAGGTACCTTAATTCACTTGAACATTTACAAAGGACACTGCGAATCCCAACGCTaGCAGGGAATTCCATTCCAA | + |
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Preference number: 4 (lower is better) Translates to: YVTALAGTLIHLNIYKGHCESQR*QGIPFQ Trigger: TTGGAATGGAATTCCCTGTCAGCGTTGGGATTCGCA...GTGTCCTTTGTAAATGTTCAAGTGAATTAAGGTACCTGCAAGTGCAGTAACATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR TCA 90 bp | TGCACTTGCAGGTACCTTAATTCACTTGAACATTTACAAAGGACACTGACAAACGGTAAAACACCATGGTaGTTCAGCCCCATCTGGATT | + |
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Preference number: 4 (lower is better) Translates to: CTCRYLNSLEHLQRTLTNGKTPW*FSPIWI Trigger: AATCCAGATGGGGCTGAATCACCATGGTGTTTTACC...GTTTGTCAGTGTCCTTTGTAAATGTTCAAGTGAATTAAGGTACCTGCAAGTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR TCA 90 bp | CATTCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACCACGACCAGGAACAATaGCACCAAGAACCATTCTCA | + |
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Preference number: 4 (lower is better) Translates to: HSSIFRRYVTALAGTLIHHDQEQ*HQEPFS Trigger: TGAGAATGGTTCTTGGTGTCATTGTTCCTGGTCGTG...GTGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGAATG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR GCA 90 bp | CATTCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACTGTTTAAGATCTGCTTaGGCTTCTCCTCGCCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: HSSIFRRYVTALAGTLIHCLRSA*ASPRLS Trigger: AGAGAGGCGAGGAGAAGCGCAAGCAGATCTTAAACA...GTGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CCA 90 bp | TCACAACACTCAAGTAGTTGTTCTAGGATTGTTTTAGGTGACATTTTGATCCTGGTCGGGATATCTTTCTaGCAAGAACTTGTGCCGGTG | + |
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Preference number: 4 (lower is better) Translates to: SQHSSSCSRIVLGDILILVGISF*QELVPV Trigger: CACCGGCACAAGTTCTTGCCAGAAAGATATCCCGAC...CAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACTACTTGAGTGTTGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CCA 90 bp | TTCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACTTGTCGGGATATCTTTCTaGCAAGAACTTGTGCCGGTG | + |
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Preference number: 4 (lower is better) Translates to: FKYLQEICYCTCRYLNSLVGISF*QELVPV Trigger: CACCGGCACAAGTTCTTGCCAGAAAGATATCCCGAC...AAGTGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CCA 90 bp | AGTAGTTGTTCTAGGATTGTTTTAGGTGACATTTTGATCCTGAAGTCTTGGAAACAGGACGATTTGGGATaGCACATCCACGACCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: SSCSRIVLGDILILKSWKQDDLG*HIHDQE Trigger: TTCCTGGTCGTGGATGTGCCATCCCAAATCGTCCTG...TTTCCAAGACTTCAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| 3UTR CAA 72 bp | AACTCACCATGTGATATGGGCATGTGCTTTCCTCCATaGATGTTTGTGTGCCAGTATTTAGAGGATACATCT | + |
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Preference number: 4 (lower is better) Translates to: NSPCDMGMCFPP*MFVCQYLEDTS Trigger: AGATGTATCCTCTAAATACTGGCACACAAACATCAATGGAGGAAAGCACATGCCCATATCACATGGTGAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199581.5 |
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| CDS-3UTR TCA 90 bp | TTCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACTTGGTAAAACACCATGGTaGTTCAGCCCCATCTGGATT | + |
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Preference number: 4 (lower is better) Translates to: FKYLQEICYCTCRYLNSLGKTPW*FSPIWI Trigger: AATCCAGATGGGGCTGAATCACCATGGTGTTTTACC...AAGTGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR TCA 90 bp | TCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACTTGTGTGTTGTTCACAAATaGGTGGGCCACCATAATCTC | + |
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Preference number: 4 (lower is better) Translates to: SSIFRRYVTALAGTLIHLCVVHK*VGHHNL Trigger: GAGATTATGGTGGCCCACTCATTTGTGAACAACACA...CAAGTGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR TCA 90 bp | TCAAGTAGTTGTTCTAGGATTGTTTTAGGTGACATTTTGATCCTGAAGTCTTGGCACGACCAGGAACAATaGCACCAAGAACCATTCTCA | + |
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Preference number: 4 (lower is better) Translates to: SSSCSRIVLGDILILKSWHDQEQ*HQEPFS Trigger: TGAGAATGGTTCTTGGTGTCATTGTTCCTGGTCGTG...CCAAGACTTCAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACTACTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR GCA 90 bp | TCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACTTGCATGAACATCGTGGATaGCAAGCCAAGCTTCATAGT | + |
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Preference number: 4 (lower is better) Translates to: SSIFRRYVTALAGTLIHLHEHRG*QAKLHS Trigger: ACTATGAAGCTTGGCTTGGCATCCACGATGTTCATG...CAAGTGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGA 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR GCA 90 bp | AGTTGTTCTAGGATTGTTTTAGGTGACATTTTGATCCTGAAGTCTTGGAAATCCTGTTTAAGATCTGCTTaGGCTTCTCCTCGCCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: SCSRIVLGDILILKSWKSCLRSA*ASPRLS Trigger: AGAGAGGCGAGGAGAAGCGCAAGCAGATCTTAAACA...GGATTTCCAAGACTTCAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR GCA 90 bp | TCTGAACACTCACAACACTCAAGTAGTTGTTCTAGGATTGTTTTAGGTGACATTCATTCAAAGTCACCTTaGCTTGATGGTGCTGACTGC | + |
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Preference number: 4 (lower is better) Translates to: SEHSQHSSSCSRIVLGDIHSKSP*LDGADC Trigger: GCAGTCAGCACCATCAAGGCAAGGTGACTTTGAATG...AATGTCACCTAAAACAATCCTAGAACAACTACTTGAGTGTTGTGAGTGTTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR GCA 90 bp | TCATTCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACATTCAAAGTCACCTTaGCTTGATGGTGCTGACTGC | + |
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Preference number: 4 (lower is better) Translates to: SFKYLQEICYCTCRYLNSHSKSP*LDGADC Trigger: GCAGTCAGCACCATCAAGGCAAGGTGACTTTGAATG...TGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CCA 90 bp | TCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACTTGTCCAAATGGTATTGCTaGTTCCCCTGTAACCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: SSIFRRYVTALAGTLIHLSKWYC*FPCNLL Trigger: GAGAAGGTTACAGGGGAACCAGCAATACCATTTGGA...CAAGTGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CCA 90 bp | CATTCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACTCCAAATGGTATTGCTaGTTCCCCTGTAACCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: HSSIFRRYVTALAGTLIHSKWYC*FPCNLL Trigger: GAGAAGGTTACAGGGGAACCAGCAATACCATTTGGA...GTGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CCA 90 bp | TCAAGTAGTTGTTCTAGGATTGTTTTAGGTGACATTTTGATCCTGAAGTCTTGGGCCAACTCGGATGTTTaGGTCAGTGGTAAAACACCA | + |
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Preference number: 4 (lower is better) Translates to: SSSCSRIVLGDILILKSWANSDV*VSGKTP Trigger: TGGTGTTTTACCACTGACCCAAACATCCGAGTTGGC...CCAAGACTTCAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACTACTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CCA 90 bp | TCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACTTGTTGTTCACAAATGAGTaGGCCACCATAATCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSIFRRYVTALAGTLIHLLFTNE*ATIISL Trigger: GAGGGAGATTATGGTGGCCCACTCATTTGTGAACAA...CAAGTGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS-3UTR CCA 90 bp | AGTAGTTGTTCTAGGATTGTTTTAGGTGACATTTTGATCCTGAAGTCTTGGAAAAATACCAGGACGATTTaGGATGGCACATCCACGACC | + |
|
Preference number: 4 (lower is better) Translates to: SSCSRIVLGDILILKSWKNTRTI*DGTSTT Trigger: GGTCGTGGATGTGCCATCCCAAATCGTCCTGGTATT...TTTCCAAGACTTCAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS-3UTR TCA 90 bp | TATGTTACTGCACTTGCAGGTACCTTAATTCACTTGAACATTTACAAAGGACACTCATTCACAGCACTGTaGGCGCACGTTTTAATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: YVTALAGTLIHLNIYKGHSFTAL*AHVLIA Trigger: TGCAATTAAAACGTGCGCTCACAGTGCTGTGAATGA...GTGTCCTTTGTAAATGTTCAAGTGAATTAAGGTACCTGCAAGTGCAGTAACATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS-3UTR TCA 90 bp | TTCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACTTTGTGTTGTTCACAAATaGGTGGGCCACCATAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: FKYLQEICYCTCRYLNSLCVVHK*VGHHNL Trigger: GAGATTATGGTGGCCCACTCATTTGTGAACAACACA...AAGTGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS-3UTR GCA 90 bp | CATTCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACCACCATTGCAGGTCATaGATTCAACTTCTGAACACT | + |
|
Preference number: 4 (lower is better) Translates to: HSSIFRRYVTALAGTLIHHHCRS*IQLLNT Trigger: AGTGTTCAGAAGTTGAATGCATGACCTGCAATGGTG...GTGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGAATG 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS-3UTR GCA 90 bp | TTCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACTTAGCGCACGTTTTAATTaGACAATACTCCCAAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FKYLQEICYCTCRYLNSLSARFN*TILPRG Trigger: ACCCCTTGGGAGTATTGTGCAATTAAAACGTGCGCT...AAGTGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS-3UTR GCA 90 bp | TCACAACACTCAAGTAGTTGTTCTAGGATTGTTTTAGGTGACATTTTGATCCTGAGCGCACGTTTTAATTaGACAATACTCCCAAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SQHSSSCSRIVLGDILILSARFN*TILPRG Trigger: ACCCCTTGGGAGTATTGTGCAATTAAAACGTGCGCT...CAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACTACTTGAGTGTTGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS-3UTR GCA 90 bp | TGCACTTGCAGGTACCTTAATTCACTTGAACATTTACAAAGGACACTGACAAACCATTCCAAATGGTATTaGTGGTTCCCCTGTAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: CTCRYLNSLEHLQRTLTNHSKWY*WFPCNL Trigger: AAGGTTACAGGGGAACCAGCAATACCATTTGGAATG...GTTTGTCAGTGTCCTTTGTAAATGTTCAAGTGAATTAAGGTACCTGCAAGTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS-3UTR GCA 90 bp | TCAAGTAGTTGTTCTAGGATTGTTTTAGGTGACATTTTGATCCTGAAGTCTTGGCATGAACATCGTGGATaGCAAGCCAAGCTTCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSSCSRIVLGDILILKSWHEHRG*QAKLHS Trigger: ACTATGAAGCTTGGCTTGGCATCCACGATGTTCATG...CCAAGACTTCAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACTACTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS-3UTR GCA 90 bp | AGTAGTTGTTCTAGGATTGTTTTAGGTGACATTTTGATCCTGAAGTCTTGGAAACCCAGCCGTAAATACTaGAAGTGGTCTTTTCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSCSRIVLGDILILKSWKPSRKY*KWSFQG Trigger: TCCCTGAAAAGACCACTTGCAGTATTTACGGCTGGG...TTTCCAAGACTTCAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS-3UTR CCA 90 bp | TGCACTTGCAGGTACCTTAATTCACTTGAACATTTACAAAGGACACTGACAAACATGGAATTCCAAGGCTaGCATTTGATGCCACTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: CTCRYLNSLEHLQRTLTNMEFQG*HLMPLL Trigger: TAAGAGTGGCATCAAATGCCAGCCTTGGAATTCCAT...GTTTGTCAGTGTCCTTTGTAAATGTTCAAGTGAATTAAGGTACCTGCAAGTGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS-3UTR CCA 90 bp | TCATTCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCATTCGTAGCGTACCTCTaGATTGCTTGTGAAACACCA | + |
|
Preference number: 4 (lower is better) Translates to: SFKYLQEICYCTCRYLNSFVAYL*IACETP Trigger: TGGTGTTTCACAAGCAATCCAGAGGTACGCTACGAA...TGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS-3UTR CCA 90 bp | AGTAGTTGTTCTAGGATTGTTTTAGGTGACATTTTGATCCTGAAGTCTTGGAAAGCCAACTCGGATGTTTaGGTCAGTGGTAAAACACCA | + |
|
Preference number: 4 (lower is better) Translates to: SSCSRIVLGDILILKSWKANSDV*VSGKTP Trigger: TGGTGTTTTACCACTGACCCAAACATCCGAGTTGGC...TTTCCAAGACTTCAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CCA 90 bp | CATGTGCTTTCCTCCATTGATGTTTGTGTGCCAGTATTTAGAGGATACATCTTGGTCTTTGTTTCTGGCTaGAAAACATTGTCTTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HVLSSIDVCVPVFRGYILVFVSG*KTLSCS Trigger: ACTGCAAGACAATGTTTTCCAGCCAGAAACAAAGAC...CAAGATGTATCCTCTAAATACTGGCACACAAACATCAATGGAGGAAAGCACATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199581.5 |
||
| CDS-3UTR CCA 90 bp | TATGTTACTGCACTTGCAGGTACCTTAATTCACTTGAACATTTACAAAGGACACTTGTTCACAAATGAGTaGGCCACCATAATCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YVTALAGTLIHLNIYKGHLFTNE*ATIISL Trigger: GAGGGAGATTATGGTGGCCCACTCATTTGTGAACAA...GTGTCCTTTGTAAATGTTCAAGTGAATTAAGGTACCTGCAAGTGCAGTAACATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS-3UTR TCA 90 bp | TCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACTTGGTAGCATCGTTTTCTTaGCTTATCAAAAACGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSIFRRYVTALAGTLIHLVASFS*LIKNEG Trigger: GCCTTCGTTTTTGATAAGTCAAGAAAACGATGCTAC...CAAGTGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR TCA 90 bp | TGCACTTGCAGGTACCTTAATTCACTTGAACATTTACAAAGGACACTGACAAACCACTTGACATACTATTaGAAGGATACCAGTAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: CTCRYLNSLEHLQRTLTNHLTYY*KDTSSI Trigger: GATGCTACTGGTATCCTTTCAATAGTATGTCAAGTG...GTTTGTCAGTGTCCTTTGTAAATGTTCAAGTGAATTAAGGTACCTGCAAGTGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR GCA 90 bp | TGCACTTGCAGGTACCTTAATTCACTTGAACATTTACAAAGGACACTGACAAACGCTTGCCATCAGGATTaGGGCAATAATTATCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: CTCRYLNSLEHLQRTLTNACHQD*GNNYHQ Trigger: TTGATGATAATTATTGCCGCAATCCTGATGGCAAGC...GTTTGTCAGTGTCCTTTGTAAATGTTCAAGTGAATTAAGGTACCTGCAAGTGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR GCA 90 bp | TATGTTACTGCACTTGCAGGTACCTTAATTCACTTGAACATTTACAAAGGACACCATTCCAAATGGTATTaGTGGTTCCCCTGTAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: YVTALAGTLIHLNIYKGHHSKWY*WFPCNL Trigger: AAGGTTACAGGGGAACCAGCAATACCATTTGGAATG...GTGTCCTTTGTAAATGTTCAAGTGAATTAAGGTACCTGCAAGTGCAGTAACATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CCA 90 bp | TATGTTACTGCACTTGCAGGTACCTTAATTCACTTGAACATTTACAAAGGACACATGGAATTCCAAGGCTaGCATTTGATGCCACTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: YVTALAGTLIHLNIYKGHMEFQG*HLMPLL Trigger: TAAGAGTGGCATCAAATGCCAGCCTTGGAATTCCAT...GTGTCCTTTGTAAATGTTCAAGTGAATTAAGGTACCTGCAAGTGCAGTAACATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CCA 90 bp | AGTTGTTCTAGGATTGTTTTAGGTGACATTTTGATCCTGAAGTCTTGGAAATCCGAATTCCATTCCAAATaGTATTGCTGGTTCCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SCSRIVLGDILILKSWKSEFHSK*YCWFPC Trigger: ACAGGGGAACCAGCAATACCATTTGGAATGGAATTC...GGATTTCCAAGACTTCAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CCA 90 bp | TGCACTTGCAGGTACCTTAATTCACTTGAACATTTACAAAGGACACTGACAAACGTCCAGACCTTGTTTTaGATAAGTTGCCCATGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: CTCRYLNSLEHLQRTLTNVQTLF*ISCPCN Trigger: ATTACATGGGCAACTTATCCAAAACAAGGTCTGGAC...GTTTGTCAGTGTCCTTTGTAAATGTTCAAGTGAATTAAGGTACCTGCAAGTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CCA 90 bp | CATTCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACTACTGTTGTTTGTGTTaGAATGCCATTTACAACCCG | + |
|
Preference number: 4 (lower is better) Translates to: HSSIFRRYVTALAGTLIHYCCLC*NAIYNP Trigger: CGGGTTGTAAATGGCATTCCAACACAAACAACAGTA...GTGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CCA 90 bp | CATTCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACCGTAAATACTGCAAGTaGTCTTTTCAGGGATTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: HSSIFRRYVTALAGTLIHRKYCK*SFQGLY Trigger: GTACAATCCCTGAAAAGACCACTTGCAGTATTTACG...GTGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR TCA 90 bp | AGTTGTTCTAGGATTGTTTTAGGTGACATTTTGATCCTGAAGTCTTGGAAATCCGTAGCATCGTTTTCTTaGCTTATCAAAAACGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SCSRIVLGDILILKSWKSVASFS*LIKNEG Trigger: GCCTTCGTTTTTGATAAGTCAAGAAAACGATGCTAC...GGATTTCCAAGACTTCAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR TCA 90 bp | TATGTTACTGCACTTGCAGGTACCTTAATTCACTTGAACATTTACAAAGGACACCACTTGACATACTATTaGAAGGATACCAGTAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: YVTALAGTLIHLNIYKGHHLTYY*KDTSSI Trigger: GATGCTACTGGTATCCTTTCAATAGTATGTCAAGTG...GTGTCCTTTGTAAATGTTCAAGTGAATTAAGGTACCTGCAAGTGCAGTAACATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR GCA 90 bp | TCATTCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCATGTAGCTTTCACCATTaGAGGTCATGCATTCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: SFKYLQEICYCTCRYLNSCSFHH*RSCIQL Trigger: AAGTTGAATGCATGACCTGCAATGGTGAAAGCTACA...TGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGAATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR GCA 90 bp | AGTTGTTCTAGGATTGTTTTAGGTGACATTTTGATCCTGAAGTCTTGGAAATCCTGTAGCTTTCACCATTaGAGGTCATGCATTCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: SCSRIVLGDILILKSWKSCSFHH*RSCIQL Trigger: AAGTTGAATGCATGACCTGCAATGGTGAAAGCTACA...GGATTTCCAAGACTTCAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR GCA 90 bp | AGTTGTTCTAGGATTGTTTTAGGTGACATTTTGATCCTGAAGTCTTGGAAATCCGCTTGCCATCAGGATTaGGGCAATAATTATCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: SCSRIVLGDILILKSWKSACHQD*GNNYHQ Trigger: TTGATGATAATTATTGCCGCAATCCTGATGGCAAGC...GGATTTCCAAGACTTCAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR GCA 90 bp | CATGTGCTTTCCTCCATTGATGTTTGTGTGCCAGTATTTAGAGGATACATCTTGTGTAATTTTTCCCATTaGCACGATAACAATCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: HVLSSIDVCVPVFRGYILCNFSH*HDNNLV Trigger: GACAAGATTGTTATCGTGGCAATGGGAAAAATTACA...CAAGATGTATCCTCTAAATACTGGCACACAAACATCAATGGAGGAAAGCACATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199581.5 |
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| CDS-3UTR CCA 90 bp | TCAAGTAGTTGTTCTAGGATTGTTTTAGGTGACATTTTGATCCTGAAGTCTTGGGTCCAGACCTTGTTTTaGATAAGTTGCCCATGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSSCSRIVLGDILILKSWVQTLF*ISCPCN Trigger: ATTACATGGGCAACTTATCCAAAACAAGGTCTGGAC...CCAAGACTTCAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACTACTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CCA 90 bp | AGTTGTTCTAGGATTGTTTTAGGTGACATTTTGATCCTGAAGTCTTGGAAATCCTACTGTTGTTTGTGTTaGAATGCCATTTACAACCCG | + |
|
Preference number: 4 (lower is better) Translates to: SCSRIVLGDILILKSWKSYCCLC*NAIYNP Trigger: CGGGTTGTAAATGGCATTCCAACACAAACAACAGTA...GGATTTCCAAGACTTCAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS-3UTR CCA 90 bp | TCATTCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCAGTCTTTGTTTCTGGCTaGAAAACATTGTCTTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SFKYLQEICYCTCRYLNSVFVSG*KTLSCS Trigger: ACTGCAAGACAATGTTTTCCAGCCAGAAACAAAGAC...TGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS-3UTR CCA 90 bp | AGTTGTTCTAGGATTGTTTTAGGTGACATTTTGATCCTGAAGTCTTGGAAATCCCGTAAATACTGCAAGTaGTCTTTTCAGGGATTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SCSRIVLGDILILKSWKSRKYCK*SFQGLY Trigger: GTACAATCCCTGAAAAGACCACTTGCAGTATTTACG...GGATTTCCAAGACTTCAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CCA 90 bp | TCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACTTGCAGGATATTACAGGATaGTCCAAATTGACAATTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SSIFRRYVTALAGTLIHLQDITG*SKLTIV Trigger: TACAATTGTCAATTTGGACCATCCTGTAATATCCTG...CAAGTGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS-3UTR CCA 90 bp | TCATTCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCAGCAGTTGTTTTGTTTTaGCACAGGATATTACAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SFKYLQEICYCTCRYLNSAVVLF*HRILQD Trigger: ATCCTGTAATATCCTGTGCCAAAACAAAACAACTGC...TGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGAATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS-3UTR CCA 90 bp | TTCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACTTGCAGTTGTTTTGTTTTaGCACAGGATATTACAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FKYLQEICYCTCRYLNSLAVVLF*HRILQD Trigger: ATCCTGTAATATCCTGTGCCAAAACAAAACAACTGC...AAGTGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS-3UTR CCA 90 bp | TATGTTACTGCACTTGCAGGTACCTTAATTCACTTGAACATTTACAAAGGACACTCAAGTCTTTGTTTCTaGCTGGAAAACATTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YVTALAGTLIHLNIYKGHSSLCF*LENIVL Trigger: CAAGACAATGTTTTCCAGCCAGAAACAAAGACTTGA...GTGTCCTTTGTAAATGTTCAAGTGAATTAAGGTACCTGCAAGTGCAGTAACATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS-3UTR GCA 90 bp | TCATTCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCATGTAATTTTTCCCATTaGCACGATAACAATCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SFKYLQEICYCTCRYLNSCNFSH*HDNNLV Trigger: GACAAGATTGTTATCGTGGCAATGGGAAAAATTACA...TGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGAATGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS-3UTR CCA 90 bp | TATGTTACTGCACTTGCAGGTACCTTAATTCACTTGAACATTTACAAAGGACACCAGGATATTACAGGATaGTCCAAATTGACAATTGTA | + |
|
Preference number: 4 (lower is better) Translates to: YVTALAGTLIHLNIYKGHQDITG*SKLTIV Trigger: TACAATTGTCAATTTGGACCATCCTGTAATATCCTG...GTGTCCTTTGTAAATGTTCAAGTGAATTAAGGTACCTGCAAGTGCAGTAACATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| 3UTR CAA 72 bp | TCAAGTAGTTGTTCTAGGATTGTTTTAGGTGACATTTaGATCCTGAAGTCTTGGAAATCCTCATGTATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSSCSRIVLGDI*ILKSWKSSCIH Trigger: ATGGATACATGAGGATTTCCAAGACTTCAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACTACTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS TCA 90 bp | GTGCCGGTGTGGTGTCTGCTGGTCCCAGCGCTGACAAGTCTTGCCTaGTTCTGTGTGATCCATGGGACCTCTGTAGCTTTCACCATTGCA | + |
|
Preference number: 5 (lower is better) Translates to: VPVWCLLVPALTSLA*FCVIHGTSVAFTIA Trigger: TGCAATGGTGAAAGCTACAGAGGTCCCATGGATCACACAGAATCAGGCAAGACTTGTCAGCGCTGGGACCAGCAGACACCACACCGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030683.8 ENSMUST00000196645.2 ENSMUST00000199581.5 |
||
| CDS GCA 90 bp | ACTTGTGCCGGTGTGGTGTCTGCTGGTCCCAGCGCTGACAAGTCTTaGCTGATTCTGTGTGATCCATGGGACCTCTGTAGCTTTCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: TCAGVVSAGPSADKS*LILCDPWDLCSFHH Trigger: ATGGTGAAAGCTACAGAGGTCCCATGGATCACACAGAATCAGGCAAGACTTGTCAGCGCTGGGACCAGCAGACACCACACCGGCACAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030683.8 ENSMUST00000196645.2 ENSMUST00000199581.5 |
||
| CDS TCA 90 bp | ACTGAGGAATGTCACAGACTTCGTAGCGTACCTCTGGATTGCTTGTaGAACACCAGGGTCCCCCTTCTTCCCCTCGAGGATTTCGACAGT | + |
|
Preference number: 5 (lower is better) Translates to: TEECHRLRSVPLDCL*NTRVPLLPLEDFDS Trigger: ACTGTCGAAATCCTCGAGGGGAAGAAGGGGGACCCTGGTGTTTCACAAGCAATCCAGAGGTACGCTACGAAGTCTGTGACATTCCTCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030683.8 ENSMUST00000196645.2 ENSMUST00000199581.5 |
||
| CDS GCA 90 bp | AGCCTTCAGGACCATAGACCAGCTGGGAAATGTTTAAGATCTGCTTaGGCTTCTCCTCGCCTCTCTCATGAACATCGTGGATGCCAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SLQDHRPAGKCLRSA*ASPRLSHEHRGCQA Trigger: GGCTTGGCATCCACGATGTTCATGAGAGAGGCGAGGAGAAGCGCAAGCAGATCTTAAACATTTCCCAGCTGGTCTATGGTCCTGAAGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030683.8 ENSMUST00000196645.2 ENSMUST00000199581.5 |
||
| CDS CCA 90 bp | GCTGGTCCCAGCGCTGACAAGTCTTGCCTGATTCTGTGTGATCCATaGGACCTCTGTAGCTTTCACCATTGCAGGTCATGCATTCAACTT | + |
|
Preference number: 5 (lower is better) Translates to: AGPSADKSCLILCDP*DLCSFHHCRSCIQL Trigger: AAGTTGAATGCATGACCTGCAATGGTGAAAGCTACAGAGGTCCCATGGATCACACAGAATCAGGCAAGACTTGTCAGCGCTGGGACCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030683.8 ENSMUST00000196645.2 ENSMUST00000199581.5 |
||
| CDS GCA 90 bp | AGGGACATCAGTCTCATTCACAGCACTGTGAGCGCACGTTTTAATTaGACAATACTCCCAAGGGGTGTCAGGGTCAAGAGTGTAGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: RDISLIHSTVSARFN*TILPRGVRVKSVAP Trigger: TGGTGCTACACTCTTGACCCTGACACCCCTTGGGAGTATTGTGCAATTAAAACGTGCGCTCACAGTGCTGTGAATGAGACTGATGTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030683.8 ENSMUST00000196645.2 ENSMUST00000199581.5 |
||
| CDS GCA 90 bp | ACTGCGAATCCCAACGCTGACAGGGAATTCCATTCCAAATGGTATTaGTGGTTCCCCTGTAACCTTCTCCTTGGCCTTGAATGCATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: TANPNADREFHSKWY*WFPCNLLLGLECIQ Trigger: CTGAATGCATTCAAGGCCAAGGAGAAGGTTACAGGGGAACCAGCAATACCATTTGGAATGGAATTCCCTGTCAGCGTTGGGATTCGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030683.8 ENSMUST00000196645.2 ENSMUST00000199581.5 |
||
| CDS GCA 90 bp | AGATCTGCTTGCGCTTCTCCTCGCCTCTCTCATGAACATCGTGGATaGCAAGCCAAGCTTCATAGTCTTTCAAGTCTTTGTTTCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RSACASPRLSHEHRG*QAKLHSLSSLCFWL Trigger: CAGCCAGAAACAAAGACTTGAAAGACTATGAAGCTTGGCTTGGCATCCACGATGTTCATGAGAGAGGCGAGGAGAAGCGCAAGCAGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030683.8 ENSMUST00000196645.2 ENSMUST00000199581.5 |
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| CDS CCA 90 bp | GCGAATCCCAACGCTGACAGGGAATTCCATTCCAAATGGTATTGCTaGTTCCCCTGTAACCTTCTCCTTGGCCTTGAATGCATTCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ANPNADREFHSKWYC*FPCNLLLGLECIQL Trigger: CAACTGAATGCATTCAAGGCCAAGGAGAAGGTTACAGGGGAACCAGCAATACCATTTGGAATGGAATTCCCTGTCAGCGTTGGGATTCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030683.8 ENSMUST00000196645.2 ENSMUST00000199581.5 |
||
| CDS CCA 90 bp | TCCCATTGCCACGATAACAATCTTGTCCACTTGACACGTCACACTTaGGAATTTGAGAGCAGTAGCCAACTCGGATGTTTGGGTCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SHCHDNNLVHLTRHT*EFESSSQLGCLGQW Trigger: CCACTGACCCAAACATCCGAGTTGGCTACTGCTCTCAAATTCCCAAGTGTGACGTGTCAAGTGGACAAGATTGTTATCGTGGCAATGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030683.8 ENSMUST00000196645.2 ENSMUST00000199581.5 |
||
| CDS-3UTR CAA 90 bp | TCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACTTGCACCATGGCCTCGGCTaGCCATCAGGATTGCGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: SSIFRRYVTALAGTLIHLHHGLG*PSGLRQ Trigger: TTGCCGCAATCCTGATGGCAAGCCGAGGCCATGGTG...CAAGTGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS-3UTR CAA 90 bp | TATGTTACTGCACTTGCAGGTACCTTAATTCACTTGAACATTTACAAAGGACACCACCATGGCCTCGGCTaGCCATCAGGATTGCGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: YVTALAGTLIHLNIYKGHHHGLG*PSGLRQ Trigger: TTGCCGCAATCCTGATGGCAAGCCGAGGCCATGGTG...GTGTCCTTTGTAAATGTTCAAGTGAATTAAGGTACCTGCAAGTGCAGTAACATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS-3UTR CAA 90 bp | CATTCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACCTTTCTGGCAAGAACTaGTGCCGGTGTGGTGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HSSIFRRYVTALAGTLIHLSGKN*CRCGVC Trigger: GCAGACACCACACCGGCACAAGTTCTTGCCAGAAAG...GTGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS-3UTR CAA 90 bp | TCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACTTGCTTTCTGGCAAGAACTaGTGCCGGTGTGGTGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSIFRRYVTALAGTLIHLLSGKN*CRCGVC Trigger: GCAGACACCACACCGGCACAAGTTCTTGCCAGAAAG...CAAGTGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS GCA 90 bp | GTCCAGACCTTGTTTTGGATAAGTTGCCCATGTAATTTTTCCCATTaGCACGATAACAATCTTGTCCACTTGACACGTCACACTTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VQTLFWISCPCNFSH*HDNNLVHLTRHTWE Trigger: TTCCCAAGTGTGACGTGTCAAGTGGACAAGATTGTTATCGTGGCAATGGGAAAAATTACATGGGCAACTTATCCAAAACAAGGTCTGGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030683.8 ENSMUST00000196645.2 ENSMUST00000199581.5 |
||
| CDS-3UTR CAA 90 bp | TCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACTTGTTCCTGATACACCTGTaGGCACACTCATCTGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSIFRRYVTALAGTLIHLFLIHL*AHSSAE Trigger: CTCTGCAGATGAGTGTGCCAACAGGTGTATCAGGAA...CAAGTGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CAA 90 bp | CATTCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACGTCACACTTGGGAATTaGAGAGCAGTAGCCAACTCG | + |
|
Preference number: 5 (lower is better) Translates to: HSSIFRRYVTALAGTLIHVTLGN*RAVANS Trigger: CGAGTTGGCTACTGCTCTCAAATTCCCAAGTGTGAC...GTGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS-3UTR CAA 90 bp | TCTGAACACTCACAACACTCAAGTAGTTGTTCTAGGATTGTTTTAGGTGACATTTTCCTGATACACCTGTaGGCACACTCATCTGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SEHSQHSSSCSRIVLGDIFLIHL*AHSSAE Trigger: CTCTGCAGATGAGTGTGCCAACAGGTGTATCAGGAA...AATGTCACCTAAAACAATCCTAGAACAACTACTTGAGTGTTGTGAGTGTTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS-3UTR CAA 90 bp | TGCACTTGCAGGTACCTTAATTCACTTGAACATTTACAAAGGACACTGACAAACTTCCAAGGCTGGCATTaGATGCCACTCTTAGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: CTCRYLNSLEHLQRTLTNFQGWH*MPLLVM Trigger: CATCACTAAGAGTGGCATCAAATGCCAGCCTTGGAA...GTTTGTCAGTGTCCTTTGTAAATGTTCAAGTGAATTAAGGTACCTGCAAGTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS-3UTR CAA 90 bp | CATGTGCTTTCCTCCATTGATGTTTGTGTGCCAGTATTTAGAGGATACATCTTGACCTTCTCCTTGGCCTaGAATGCATTCAGTTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: HVLSSIDVCVPVFRGYILTFSLA*NAFSCF Trigger: GAAACAACTGAATGCATTCAAGGCCAAGGAGAAGGT...CAAGATGTATCCTCTAAATACTGGCACACAAACATCAATGGAGGAAAGCACATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199581.5 |
||
| CDS-3UTR CAA 90 bp | TCAAGTAGTTGTTCTAGGATTGTTTTAGGTGACATTTTGATCCTGAAGTCTTGGGTCACACTTGGGAATTaGAGAGCAGTAGCCAACTCG | + |
|
Preference number: 5 (lower is better) Translates to: SSSCSRIVLGDILILKSWVTLGN*RAVANS Trigger: CGAGTTGGCTACTGCTCTCAAATTCCCAAGTGTGAC...CCAAGACTTCAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACTACTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CAA 90 bp | TGCACTTGCAGGTACCTTAATTCACTTGAACATTTACAAAGGACACTGACAAACCCATCCACCCTACTGTaGTTTGTGTTGGAATGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: CTCRYLNSLEHLQRTLTNPSTLL*FVLECH Trigger: ATGGCATTCCAACACAAACAACAGTAGGGTGGATGG...GTTTGTCAGTGTCCTTTGTAAATGTTCAAGTGAATTAAGGTACCTGCAAGTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CAA 90 bp | TCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACTTGCAAAGTTATCCAGGATaGCAGGTCGAGCAAGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSIFRRYVTALAGTLIHLQSYPG*QVEQAS Trigger: TGAAGCTTGCTCGACCTGCAATCCTGGATAACTTTG...CAAGTGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CAA 90 bp | TTCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACTTAAATACCAGGACGATTaGGGATGGCACATCCACGAC | + |
|
Preference number: 5 (lower is better) Translates to: FKYLQEICYCTCRYLNSLKYQDD*GWHIHD Trigger: GTCGTGGATGTGCCATCCCAAATCGTCCTGGTATTT...AAGTGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CAA 90 bp | TCACAACACTCAAGTAGTTGTTCTAGGATTGTTTTAGGTGACATTTTGATCCTGCCTGTAACCTTCTCCTaGGCCTTGAATGCATTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SQHSSSCSRIVLGDILILPVTFS*ALNAFS Trigger: ACTGAATGCATTCAAGGCCAAGGAGAAGGTTACAGG...CAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACTACTTGAGTGTTGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CAA 90 bp | TATGTTACTGCACTTGCAGGTACCTTAATTCACTTGAACATTTACAAAGGACACCCTGTAACCTTCTCCTaGGCCTTGAATGCATTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: YVTALAGTLIHLNIYKGHPVTFS*ALNAFS Trigger: ACTGAATGCATTCAAGGCCAAGGAGAAGGTTACAGG...GTGTCCTTTGTAAATGTTCAAGTGAATTAAGGTACCTGCAAGTGCAGTAACATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CAA 90 bp | CATGTGCTTTCCTCCATTGATGTTTGTGTGCCAGTATTTAGAGGATACATCTTGCTACTGTTGTTTGTGTaGGAATGCCATTTACAACCC | + |
|
Preference number: 5 (lower is better) Translates to: HVLSSIDVCVPVFRGYILLLLFV*ECHLQP Trigger: GGGTTGTAAATGGCATTCCAACACAAACAACAGTAG...CAAGATGTATCCTCTAAATACTGGCACACAAACATCAATGGAGGAAAGCACATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199581.5 |
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| CDS-3UTR CAA 90 bp | TCAAGTAGTTGTTCTAGGATTGTTTTAGGTGACATTTTGATCCTGAAGTCTTGGCCATCCACCCTACTGTaGTTTGTGTTGGAATGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SSSCSRIVLGDILILKSWPSTLL*FVLECH Trigger: ATGGCATTCCAACACAAACAACAGTAGGGTGGATGG...CCAAGACTTCAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACTACTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CAA 90 bp | TCATTCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACAAAGTTATCCAGGATaGCAGGTCGAGCAAGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SFKYLQEICYCTCRYLNSQSYPG*QVEQAS Trigger: TGAAGCTTGCTCGACCTGCAATCCTGGATAACTTTG...TGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CAA 90 bp | TATGTTACTGCACTTGCAGGTACCTTAATTCACTTGAACATTTACAAAGGACACCAAAGTCACCTTGCCTaGATGGTGCTGACTGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: YVTALAGTLIHLNIYKGHQSHLA*MVLTAF Trigger: AAATGCAGTCAGCACCATCAAGGCAAGGTGACTTTG...GTGTCCTTTGTAAATGTTCAAGTGAATTAAGGTACCTGCAAGTGCAGTAACATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CAA 90 bp | AGTTGTTCTAGGATTGTTTTAGGTGACATTTTGATCCTGAAGTCTTGGAAATCCCAAAGTCACCTTGCCTaGATGGTGCTGACTGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: SCSRIVLGDILILKSWKSQSHLA*MVLTAF Trigger: AAATGCAGTCAGCACCATCAAGGCAAGGTGACTTTG...GGATTTCCAAGACTTCAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CAA 90 bp | AGTAGTTGTTCTAGGATTGTTTTAGGTGACATTTTGATCCTGAAGTCTTGGAAAAAATACCAGGACGATTaGGGATGGCACATCCACGAC | + |
|
Preference number: 5 (lower is better) Translates to: SSCSRIVLGDILILKSWKKYQDD*GWHIHD Trigger: GTCGTGGATGTGCCATCCCAAATCGTCCTGGTATTT...TTTCCAAGACTTCAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACTACT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS CCA 90 bp | ATTTCTGTATTTCAAACTAACCATCCACCCTACTGTTGTTTGTGTTaGAATGCCATTTACAACCCGCAGTTGTTTTGTTTTGGCACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ISVFQTNHPPYCCLC*NAIYNPQLFCFGTG Trigger: TCCTGTGCCAAAACAAAACAACTGCGGGTTGTAAATGGCATTCCAACACAAACAACAGTAGGGTGGATGGTTAGTTTGAAATACAGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030683.8 ENSMUST00000196645.2 ENSMUST00000199581.5 |
||
| CDS-3UTR CAA 90 bp | TCACAACACTCAAGTAGTTGTTCTAGGATTGTTTTAGGTGACATTTTGATCCTGTTATCATCAAAGCCCTaGTCGGGATATCTTTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SQHSSSCSRIVLGDILILLSSKP*SGYLSG Trigger: GCCAGAAAGATATCCCGACAAGGGCTTTGATGATAA...CAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACTACTTGAGTGTTGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CAA 90 bp | TCATTCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCATTATCATCAAAGCCCTaGTCGGGATATCTTTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SFKYLQEICYCTCRYLNSLSSKP*SGYLSG Trigger: GCCAGAAAGATATCCCGACAAGGGCTTTGATGATAA...TGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CAA 90 bp | AGTTGTTCTAGGATTGTTTTAGGTGACATTTTGATCCTGAAGTCTTGGAAATCCACCTTCTCCTTGGCCTaGAATGCATTCAGTTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SCSRIVLGDILILKSWKSTFSLA*NAFSCF Trigger: GAAACAACTGAATGCATTCAAGGCCAAGGAGAAGGT...GGATTTCCAAGACTTCAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS-3UTR CAA 90 bp | TGCACTTGCAGGTACCTTAATTCACTTGAACATTTACAAAGGACACTGACAAACCGCAGTTGTTTTGTTTaGGCACAGGATATTACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: CTCRYLNSLEHLQRTLTNRSCFV*AQDITG Trigger: TCCTGTAATATCCTGTGCCAAAACAAAACAACTGCG...GTTTGTCAGTGTCCTTTGTAAATGTTCAAGTGAATTAAGGTACCTGCAAGTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS-3UTR CAA 90 bp | TCTGAACACTCACAACACTCAAGTAGTTGTTCTAGGATTGTTTTAGGTGACATTTCTGGCTGGAAAACATaGTCTTGCAGTAAGAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: SEHSQHSSSCSRIVLGDISGWKT*SCSKNP Trigger: TGGGTTCTTACTGCAAGACAATGTTTTCCAGCCAGA...AATGTCACCTAAAACAATCCTAGAACAACTACTTGAGTGTTGTGAGTGTTCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS-3UTR CAA 90 bp | AGTTGTTCTAGGATTGTTTTAGGTGACATTTTGATCCTGAAGTCTTGGAAATCCTCTGGCTGGAAAACATaGTCTTGCAGTAAGAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: SCSRIVLGDILILKSWKSSGWKT*SCSKNP Trigger: TGGGTTCTTACTGCAAGACAATGTTTTCCAGCCAGA...GGATTTCCAAGACTTCAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS-3UTR CAA 90 bp | CATTCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACAGTAATGGGTCTTCCTaGGTAAGAGTAGTTTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HSSIFRRYVTALAGTLIHSNGSS*VRVVFA Trigger: AGCAAAAACTACTCTTACCAAGGAAGACCCATTACT...GTGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS-3UTR CAA 90 bp | TTCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACTTTTTTCTCTAAGGTCCTaGCATTTGAAGTTCTCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: FKYLQEICYCTCRYLNSLFSLRS*HLKFSG Trigger: TCCCGAGAACTTCAAATGCAAGGACCTTAGAGAAAA...AAGTGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGAA 39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS-3UTR CAA 90 bp | TCTGAACACTCACAACACTCAAGTAGTTGTTCTAGGATTGTTTTAGGTGACATTTTTTCTCTAAGGTCCTaGCATTTGAAGTTCTCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SEHSQHSSSCSRIVLGDIFSLRS*HLKFSG Trigger: TCCCGAGAACTTCAAATGCAAGGACCTTAGAGAAAA...AATGTCACCTAAAACAATCCTAGAACAACTACTTGAGTGTTGTGAGTGTTCAGA 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS-3UTR CAA 90 bp | TCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACTTGAAATCCTCCATATTCTaGTCCCACATGGAACATGTA | + |
|
Preference number: 5 (lower is better) Translates to: SSIFRRYVTALAGTLIHLKSSIF*SHMEHV Trigger: TACATGTTCCATGTGGGACAAGAATATGGAGGATTT...CAAGTGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS-3UTR CAA 90 bp | CATTCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACAAATCCTCCATATTCTaGTCCCACATGGAACATGTA | + |
|
Preference number: 5 (lower is better) Translates to: HSSIFRRYVTALAGTLIHKSSIF*SHMEHV Trigger: TACATGTTCCATGTGGGACAAGAATATGGAGGATTT...GTGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS-3UTR CAA 90 bp | TGCACTTGCAGGTACCTTAATTCACTTGAACATTTACAAAGGACACTGACAAACACAGGATGGTCCAAATaGACAATTGTAGGTGTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: CTCRYLNSLEHLQRTLTNTGWSK*TIVGVV Trigger: TACTACACCTACAATTGTCAATTTGGACCATCCTGT...GTTTGTCAGTGTCCTTTGTAAATGTTCAAGTGAATTAAGGTACCTGCAAGTGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
||
| CDS-3UTR CAA 90 bp | TCACAACACTCAAGTAGTTGTTCTAGGATTGTTTTAGGTGACATTTTGATCCTGCGCAGTTGTTTTGTTTaGGCACAGGATATTACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SQHSSSCSRIVLGDILILRSCFV*AQDITG Trigger: TCCTGTAATATCCTGTGCCAAAACAAAACAACTGCG...CAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACTACTTGAGTGTTGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CAA 90 bp | TCTGAACACTCACAACACTCAAGTAGTTGTTCTAGGATTGTTTTAGGTGACATTCAACCCGCAGTTGTTTaGTTTTGGCACAGGATATTA | + |
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Preference number: 5 (lower is better) Translates to: SEHSQHSSSCSRIVLGDIQPAVV*FWHRIL Trigger: TAATATCCTGTGCCAAAACAAAACAACTGCGGGTTG...AATGTCACCTAAAACAATCCTAGAACAACTACTTGAGTGTTGTGAGTGTTCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CAA 90 bp | TATGTTACTGCACTTGCAGGTACCTTAATTCACTTGAACATTTACAAAGGACACCAACCCGCAGTTGTTTaGTTTTGGCACAGGATATTA | + |
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Preference number: 5 (lower is better) Translates to: YVTALAGTLIHLNIYKGHQPAVV*FWHRIL Trigger: TAATATCCTGTGCCAAAACAAAACAACTGCGGGTTG...GTGTCCTTTGTAAATGTTCAAGTGAATTAAGGTACCTGCAAGTGCAGTAACATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CAA 90 bp | TCATTCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCAATTTACAACCCGCAGTaGTTTTGTTTTGGCACAGGA | + |
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Preference number: 5 (lower is better) Translates to: SFKYLQEICYCTCRYLNSIYNPQ*FCFGTG Trigger: TCCTGTGCCAAAACAAAACAACTGCGGGTTGTAAAT...TGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CAA 90 bp | TCAAGTAGTTGTTCTAGGATTGTTTTAGGTGACATTTTGATCCTGAAGTCTTGGATTTACAACCCGCAGTaGTTTTGTTTTGGCACAGGA | + |
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Preference number: 5 (lower is better) Translates to: SSSCSRIVLGDILILKSWIYNPQ*FCFGTG Trigger: TCCTGTGCCAAAACAAAACAACTGCGGGTTGTAAAT...CCAAGACTTCAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACTACTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CAA 90 bp | TCATTCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACTACTGTTGTTTGTGTaGGAATGCCATTTACAACCC | + |
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Preference number: 5 (lower is better) Translates to: SFKYLQEICYCTCRYLNSLLLFV*ECHLQP Trigger: GGGTTGTAAATGGCATTCCAACACAAACAACAGTAG...TGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGAATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CAA 90 bp | TCAAGTAGTTGTTCTAGGATTGTTTTAGGTGACATTTTGATCCTGAAGTCTTGGCATTCTCATTTTGTGTaGTTCACAAATGAGTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: SSSCSRIVLGDILILKSWHSHFV*FTNEWA Trigger: GGCCCACTCATTTGTGAACAACACAAAATGAGAATG...CCAAGACTTCAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACTACTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CAA 90 bp | TCATTCAAGTATCTTCAGGAGATATGTTACTGCACTTGCAGGTACCTTAATTCACATTCTCATTTTGTGTaGTTCACAAATGAGTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: SFKYLQEICYCTCRYLNSHSHFV*FTNEWA Trigger: GGCCCACTCATTTGTGAACAACACAAAATGAGAATG...TGAATTAAGGTACCTGCAAGTGCAGTAACATATCTCCTGAAGATACTTGAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CAA 90 bp | TCTGAACACTCACAACACTCAAGTAGTTGTTCTAGGATTGTTTTAGGTGACATTAGTAATGGGTCTTCCTaGGTAAGAGTAGTTTTTGCT | + |
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Preference number: 5 (lower is better) Translates to: SEHSQHSSSCSRIVLGDISNGSS*VRVVFA Trigger: AGCAAAAACTACTCTTACCAAGGAAGACCCATTACT...AATGTCACCTAAAACAATCCTAGAACAACTACTTGAGTGTTGTGAGTGTTCAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS-3UTR CAA 90 bp | TCAAGTAGTTGTTCTAGGATTGTTTTAGGTGACATTTTGATCCTGAAGTCTTGGACAGGATGGTCCAAATaGACAATTGTAGGTGTAGTA | + |
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Preference number: 5 (lower is better) Translates to: SSSCSRIVLGDILILKSWTGWSK*TIVGVV Trigger: TACTACACCTACAATTGTCAATTTGGACCATCCTGT...CCAAGACTTCAGGATCAAAATGTCACCTAAAACAATCCTAGAACAACTACTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS TCA 72 bp | TGTCACAGACTTCGTAGCGTACCTCTGGATTGCTTGTaGAACACCAGGGTCCCCCTTCTTCCCCTCGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: CHRLRSVPLDCL*NTRVPLLPLED Trigger: ATCCTCGAGGGGAAGAAGGGGGACCCTGGTGTTTCACAAGCAATCCAGAGGTACGCTACGAAGTCTGTGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030683.8 ENSMUST00000196645.2 ENSMUST00000199581.5 |
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| CDS TCA 72 bp | TGGTGTCTGCTGGTCCCAGCGCTGACAAGTCTTGCCTaGTTCTGTGTGATCCATGGGACCTCTGTAGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: WCLLVPALTSLA*FCVIHGTSVAF Trigger: GAAAGCTACAGAGGTCCCATGGATCACACAGAATCAGGCAAGACTTGTCAGCGCTGGGACCAGCAGACACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030683.8 ENSMUST00000196645.2 ENSMUST00000199581.5 |
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| CDS CCA 72 bp | ACACTGAGGAATGTCACAGACTTCGTAGCGTACCTCTaGATTGCTTGTGAAACACCAGGGTCCCCCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: TLRNVTDFVAYL*IACETPGSPFF Trigger: GAAGAAGGGGGACCCTGGTGTTTCACAAGCAATCCAGAGGTACGCTACGAAGTCTGTGACATTCCTCAGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030683.8 ENSMUST00000196645.2 ENSMUST00000199581.5 |
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| CDS CCA 72 bp | AGCGCTGACAAGTCTTGCCTGATTCTGTGTGATCCATaGGACCTCTGTAGCTTTCACCATTGCAGGTCATGC | + |
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Preference number: 6 (lower is better) Translates to: SADKSCLILCDP*DLCSFHHCRSC Trigger: GCATGACCTGCAATGGTGAAAGCTACAGAGGTCCCATGGATCACACAGAATCAGGCAAGACTTGTCAGCGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030683.8 ENSMUST00000196645.2 ENSMUST00000199581.5 |
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| CDS CCA 72 bp | GCGAATCCCAACGCTGACAGGGAATTCCATTCCAAATaGTATTGCTGGTTCCCCTGTAACCTTCTCCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: ANPNADREFHSK*YCWFPCNLLLG Trigger: GCCAAGGAGAAGGTTACAGGGGAACCAGCAATACCATTTGGAATGGAATTCCCTGTCAGCGTTGGGATTCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030683.8 ENSMUST00000196645.2 ENSMUST00000199581.5 |
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| CDS GCA 72 bp | CCCAACGCTGACAGGGAATTCCATTCCAAATGGTATTaGTGGTTCCCCTGTAACCTTCTCCTTGGCCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: PNADREFHSKWY*WFPCNLLLGLE Trigger: TTCAAGGCCAAGGAGAAGGTTACAGGGGAACCAGCAATACCATTTGGAATGGAATTCCCTGTCAGCGTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030683.8 ENSMUST00000196645.2 ENSMUST00000199581.5 |
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| CDS GCA 72 bp | GACCATAGACCAGCTGGGAAATGTTTAAGATCTGCTTaGGCTTCTCCTCGCCTCTCTCATGAACATCGTGGA | + |
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Preference number: 6 (lower is better) Translates to: DHRPAGKCLRSA*ASPRLSHEHRG Trigger: TCCACGATGTTCATGAGAGAGGCGAGGAGAAGCGCAAGCAGATCTTAAACATTTCCCAGCTGGTCTATGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030683.8 ENSMUST00000196645.2 ENSMUST00000199581.5 |
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| CDS GCA 72 bp | AGTCTCATTCACAGCACTGTGAGCGCACGTTTTAATTaGACAATACTCCCAAGGGGTGTCAGGGTCAAGAGT | + |
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Preference number: 6 (lower is better) Translates to: SLIHSTVSARFN*TILPRGVRVKS Trigger: ACTCTTGACCCTGACACCCCTTGGGAGTATTGTGCAATTAAAACGTGCGCTCACAGTGCTGTGAATGAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030683.8 ENSMUST00000196645.2 ENSMUST00000199581.5 |
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| CDS GCA 72 bp | TGCGCTTCTCCTCGCCTCTCTCATGAACATCGTGGATaGCAAGCCAAGCTTCATAGTCTTTCAAGTCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: CASPRLSHEHRG*QAKLHSLSSLC Trigger: ACAAAGACTTGAAAGACTATGAAGCTTGGCTTGGCATCCACGATGTTCATGAGAGAGGCGAGGAGAAGCGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030683.8 ENSMUST00000196645.2 ENSMUST00000199581.5 |
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| CDS GCA 72 bp | CCCCAGCACATAACTCAGACTCATTCAAAGTCACCTTaGCTTGATGGTGCTGACTGCATTTCTCATTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: PQHITQTHSKSP*LDGADCISHSP Trigger: TGGGGAATGAGAAATGCAGTCAGCACCATCAAGGCAAGGTGACTTTGAATGAGTCTGAGTTATGTGCTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030683.8 ENSMUST00000196645.2 ENSMUST00000199581.5 |
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| CDS CCA 72 bp | AAGCTGTGTTCATGGGGGATCATGGAATTCCAAGGCTaGCATTTGATGCCACTCTTAGTGATGGATACCGTC | + |
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Preference number: 6 (lower is better) Translates to: KLCSWGIMEFQG*HLMPLLVMDTV Trigger: GACGGTATCCATCACTAAGAGTGGCATCAAATGCCAGCCTTGGAATTCCATGATCCCCCATGAACACAGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030683.8 ENSMUST00000199581.5 |
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| CDS CAA 90 bp | TCCACGACCAGGAACAATGACACCAAGAACCATTCTCATTTTGTGTaGTTCACAAATGAGTGGGCCACCATAATCTCCCTCACATGGTCC | + |
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Preference number: 6 (lower is better) Translates to: STTRNNDTKNHSHFV*FTNEWATIISLTWS Trigger: GGACCATGTGAGGGAGATTATGGTGGCCCACTCATTTGTGAACAACACAAAATGAGAATGGTTCTTGGTGTCATTGTTCCTGGTCGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030683.8 ENSMUST00000196645.2 ENSMUST00000199581.5 |
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| CDS TCA 72 bp | GTTTCCATAGGGACATCAGTCTCATTCACAGCACTGTaGGCGCACGTTTTAATTGCACAATACTCCCAAGGG | + |
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Preference number: 6 (lower is better) Translates to: VSIGTSVSFTAL*AHVLIAQYSQG Trigger: CCCTTGGGAGTATTGTGCAATTAAAACGTGCGCTCACAGTGCTGTGAATGAGACTGATGTCCCTATGGAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030683.8 ENSMUST00000196645.2 ENSMUST00000199581.5 |
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| CDS CAA 72 bp | TGTTCATGGGGGATCATGGAATTCCAAGGCTGGCATTaGATGCCACTCTTAGTGATGGATACCGTCCCTTTA | + |
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Preference number: 6 (lower is better) Translates to: CSWGIMEFQGWH*MPLLVMDTVPL Trigger: TAAAGGGACGGTATCCATCACTAAGAGTGGCATCAAATGCCAGCCTTGGAATTCCATGATCCCCCATGAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030683.8 ENSMUST00000196645.2 ENSMUST00000199581.5 |
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| CDS TCA 72 bp | TATACAGATGAGCTACTCGTAATAAACCATCCGCGTTaGTCAATCCAGTGTAGCCCCAGCCGTAAATACTGC | + |
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Preference number: 6 (lower is better) Translates to: YTDELLVINHPR*SIQCSPSRKYC Trigger: GCAGTATTTACGGCTGGGGCTACACTGGATTGATCAACGCGGATGGTTTATTACGAGTAGCTCATCTGTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030683.8 ENSMUST00000196645.2 ENSMUST00000199581.5 |
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| CDS TCA 72 bp | CACCAAGAACCATTCTCATTTTGTGTTGTTCACAAATaGGTGGGCCACCATAATCTCCCTCACATGGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: HQEPFSFCVVHK*VGHHNLPHMVL Trigger: CAGGACCATGTGAGGGAGATTATGGTGGCCCACTCATTTGTGAACAACACAAAATGAGAATGGTTCTTGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030683.8 ENSMUST00000196645.2 ENSMUST00000199581.5 |
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| CDS TCA 72 bp | GACGATTTGGGATGGCACATCCACGACCAGGAACAATaGCACCAAGAACCATTCTCATTTTGTGTTGTTCAC | + |
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Preference number: 6 (lower is better) Translates to: DDLGWHIHDQEQ*HQEPFSFCVVH Trigger: GTGAACAACACAAAATGAGAATGGTTCTTGGTGTCATTGTTCCTGGTCGTGGATGTGCCATCCCAAATCGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030683.8 ENSMUST00000196645.2 ENSMUST00000199581.5 |
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| CDS CCA 72 bp | CACGATAACAATCTTGTCCACTTGACACGTCACACTTaGGAATTTGAGAGCAGTAGCCAACTCGGATGTTTG | + |
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Preference number: 6 (lower is better) Translates to: HDNNLVHLTRHT*EFESSSQLGCL Trigger: CAAACATCCGAGTTGGCTACTGCTCTCAAATTCCCAAGTGTGACGTGTCAAGTGGACAAGATTGTTATCGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030683.8 ENSMUST00000196645.2 ENSMUST00000199581.5 |
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| CDS CCA 72 bp | ATAATATGCTACTCGAACAAAAATACCAGGACGATTTaGGATGGCACATCCACGACCAGGAACAATGACACC | + |
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Preference number: 6 (lower is better) Translates to: IICYSNKNTRTI*DGTSTTRNNDT Trigger: GGTGTCATTGTTCCTGGTCGTGGATGTGCCATCCCAAATCGTCCTGGTATTTTTGTTCGAGTAGCATATTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030683.8 ENSMUST00000196645.2 ENSMUST00000199581.5 |
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| CDS CAA 90 bp | CCACCCTACTGTTGTTTGTGTTGGAATGCCATTTACAACCCGCAGTaGTTTTGTTTTGGCACAGGATATTACAGGATGGTCCAAATTGAC | + |
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Preference number: 6 (lower is better) Translates to: PPYCCLCWNAIYNPQ*FCFGTGYYRMVQID Trigger: GTCAATTTGGACCATCCTGTAATATCCTGTGCCAAAACAAAACAACTGCGGGTTGTAAATGGCATTCCAACACAAACAACAGTAGGGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030683.8 ENSMUST00000196645.2 ENSMUST00000199581.5 |
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| CDS CAA 72 bp | AATTTTTCCCATTGCCACGATAACAATCTTGTCCACTaGACACGTCACACTTGGGAATTTGAGAGCAGTAGC | + |
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Preference number: 6 (lower is better) Translates to: NFSHCHDNNLVH*TRHTWEFESSS Trigger: GCTACTGCTCTCAAATTCCCAAGTGTGACGTGTCAAGTGGACAAGATTGTTATCGTGGCAATGGGAAAAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030683.8 ENSMUST00000196645.2 ENSMUST00000199581.5 |
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| CDS CAA 72 bp | AGGAACAATGACACCAAGAACCATTCTCATTTTGTGTaGTTCACAAATGAGTGGGCCACCATAATCTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: RNNDTKNHSHFV*FTNEWATIISL Trigger: GAGGGAGATTATGGTGGCCCACTCATTTGTGAACAACACAAAATGAGAATGGTTCTTGGTGTCATTGTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030683.8 ENSMUST00000196645.2 ENSMUST00000199581.5 |
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| CDS CAA 90 bp | GTTGTTTGTGTTGGAATGCCATTTACAACCCGCAGTTGTTTTGTTTaGGCACAGGATATTACAGGATGGTCCAAATTGACAATTGTAGGT | + |
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Preference number: 6 (lower is better) Translates to: VVCVGMPFTTRSCFV*AQDITGWSKLTIVG Trigger: ACCTACAATTGTCAATTTGGACCATCCTGTAATATCCTGTGCCAAAACAAAACAACTGCGGGTTGTAAATGGCATTCCAACACAAACAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030683.8 ENSMUST00000196645.2 ENSMUST00000199581.5 |
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| CDS CAA 72 bp | TTTGTGTTGGAATGCCATTTACAACCCGCAGTTGTTTaGTTTTGGCACAGGATATTACAGGATGGTCCAAAT | + |
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Preference number: 6 (lower is better) Translates to: FVLECHLQPAVV*FWHRILQDGPN Trigger: ATTTGGACCATCCTGTAATATCCTGTGCCAAAACAAAACAACTGCGGGTTGTAAATGGCATTCCAACACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030683.8 ENSMUST00000196645.2 ENSMUST00000199581.5 |
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| CDS TCA 72 bp | CATACTATTGAAAGGATACCAGTAGCATCGTTTTCTTaGCTTATCAAAAACGAAGGCCTTGCAAGTGAACGT | + |
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Preference number: 6 (lower is better) Translates to: HTIERIPVASFS*LIKNEGLASER Trigger: ACGTTCACTTGCAAGGCCTTCGTTTTTGATAAGTCAAGAAAACGATGCTACTGGTATCCTTTCAATAGTATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030683.8 ENSMUST00000196645.2 ENSMUST00000199581.5 |
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