Pregenerated sensors for HFM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043410Ensembl transcript IDs: ENSMUST00000112690.10, ENSMUST00000117588.8, ENSMUST00000148495.2, ENSMUST00000148686.8, ENSMUST00000155171.2, ENSMUST00000200249.2
Found 222 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGACAGCCCGAAGCTGGACCTGGAACAATCTCGCAAATAAGCATCTaGCTTCCCAGGCGACGAAGCAAAACTGATGCAGCCATCTTCTCA | + |
|
Preference number: 1 (lower is better) Translates to: GQPEAGPGTISQISI*LPRRRSKTDAAIFS Trigger: TGAGAAGATGGCTGCATCAGTTTTGCTTCGTCGCCTGGGAAGCCAGATGCTTATTTGCGAGATTGTTCCAGGTCCAGCTTCGGGCTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148495.2 |
||
| 3UTR CCA 90 bp | TCTCAATCACTGGTGAGAGAGTCAGCGGTCTCCTCTCTTGTAAATTaGCAAGACTTGCATTCTCAGCCCGCTGAGGGATCTCTGCCACAG | + |
|
Preference number: 1 (lower is better) Translates to: SQSLVRESAVSSLVN*QDLHSQPAEGSLPQ Trigger: CTGTGGCAGAGATCCCTCAGCGGGCTGAGAATGCAAGTCTTGCCAATTTACAAGAGAGGAGACCGCTGACTCTCTCACCAGTGATTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148495.2 |
||
| 3UTR GCA 90 bp | CTGTATCTTGCAATCTGCTCCACCTCAAGCTCATACTTCGGCAGATaGGCCACAGCTTCTTTTATCTGGGTCCCAAATGGTGGGTGTCTA | + |
|
Preference number: 1 (lower is better) Translates to: LYLAICSTSSSYFGR*ATASFIWVPNGGCL Trigger: TAGACACCCACCATTTGGGACCCAGATAAAAGAAGCTGTGGCGCATCTGCCGAAGTATGAGCTTGAGGTGGAGCAGATTGCAAGATACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148495.2 |
||
| 3UTR CCA 90 bp | AAAACAGAAGAGCAAACAACAGAGCAGGACACACAGGAACCCTGCTaGCGAATACACCGTGACTACACATGGTCACTGACAGCATTATTG | + |
|
Preference number: 1 (lower is better) Translates to: KTEEQTTEQDTQEPC*RIHRDYTWSLTALL Trigger: CAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCGCCAGCAGGGTTCCTGTGTGTCCTGCTCTGTTGTTTGCTCTTCTGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 ENSMUST00000148495.2 |
||
| 3UTR CCA 90 bp | ATATCCACTTCCTTAAACTTGGGAGACTGTGGTGTTTTCTTAGAGTaGGCAAAGCACATCCTCTCAATCACTGGTGAGAGAGTCAGCGGT | + |
|
Preference number: 1 (lower is better) Translates to: ISTSLNLGDCGVFLE*AKHILSITGERVSG Trigger: ACCGCTGACTCTCTCACCAGTGATTGAGAGGATGTGCTTTGCCCACTCTAAGAAAACACCACAGTCTCCCAAGTTTAAGGAAGTGGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148495.2 |
||
| 3UTR CCA 90 bp | GTGAACGTGTTTACTACCTCATCAATGAGAAACAGTCGAACCAGTTaGATAAAAGAGTTGTCTCTCCACTTCCTAGTCACACTGTCCCAC | + |
|
Preference number: 1 (lower is better) Translates to: VNVFTTSSMRNSRTS*IKELSLHFLVTLSH Trigger: GTGGGACAGTGTGACTAGGAAGTGGAGAGACAACTCTTTTATCCAACTGGTTCGACTGTTTCTCATTGATGAGGTAGTAAACACGTTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148686.8 |
||
| 3UTR CCA 90 bp | ACCTCAAGCTCATACTTCGGCAGATGCGCCACAGCTTCTTTTATCTaGGTCCCAAATGGTGGGTGTCTATTTAAAATCAGTTCAAGTTCT | + |
|
Preference number: 1 (lower is better) Translates to: TSSSYFGRCATASFI*VPNGGCLFKISSSS Trigger: AGAACTTGAACTGATTTTAAATAGACACCCACCATTTGGGACCCAGATAAAAGAAGCTGTGGCGCATCTGCCGAAGTATGAGCTTGAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148495.2 |
||
| 3UTR TCA 90 bp | CACAGGAACCCTGCTGGCGAATACACCGTGACTACACATGGTCACTaGCAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAATA | + |
|
Preference number: 1 (lower is better) Translates to: HRNPAGEYTVTTHGH*QHYCAFSDIFLKKI Trigger: TATTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCGCCAGCAGGGTTCCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 ENSMUST00000148495.2 |
||
| 3UTR CCA 90 bp | ACTGTTTCCAATAAAAATATCCACTTCCTTAAACTTGGGAGACTGTaGTGTTTTCTTAGAGTGGGCAAAGCACATCCTCTCAATCACTGG | + |
|
Preference number: 1 (lower is better) Translates to: TVSNKNIHFLKLGRL*CFLRVGKAHPLNHW Trigger: CCAGTGATTGAGAGGATGTGCTTTGCCCACTCTAAGAAAACACCACAGTCTCCCAAGTTTAAGGAAGTGGATATTTTTATTGGAAACAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148495.2 |
||
| 3UTR GCA 90 bp | GTTTGTAGAATACTGACGTTTCTGCTTACTATTGCTACACGTCCATaGATTCTCTTTGCTTATTTTCGTTTGGGTAAGTTTCACTGGGCT | + |
|
Preference number: 1 (lower is better) Translates to: VCRILTFLLTIATRP*ILFAYFRLGKFHWA Trigger: AGCCCAGTGAAACTTACCCAAACGAAAATAAGCAAAGAGAATGCATGGACGTGTAGCAATAGTAAGCAGAAACGTCAGTATTCTACAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148686.8 |
||
| 3UTR TCA 90 bp | GAAGCAGAAAAAGCATCATTTGCTTTGAATTTGTTTGTAGAATACTaGCGTTTCTGCTTACTATTGCTACACGTCCATGCATTCTCTTTG | + |
|
Preference number: 1 (lower is better) Translates to: EAEKASFALNLFVEY*RFCLLLLHVHAFSL Trigger: CAAAGAGAATGCATGGACGTGTAGCAATAGTAAGCAGAAACGTCAGTATTCTACAAACAAATTCAAAGCAAATGATGCTTTTTCTGCTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148686.8 |
||
| 3UTR CAA 90 bp | CTGGTGAGAGAGTCAGCGGTCTCCTCTCTTGTAAATTGGCAAGACTaGCATTCTCAGCCCGCTGAGGGATCTCTGCCACAGAGGACAGCC | + |
|
Preference number: 2 (lower is better) Translates to: LVRESAVSSLVNWQD*HSQPAEGSLPQRTA Trigger: GGCTGTCCTCTGTGGCAGAGATCCCTCAGCGGGCTGAGAATGCAAGTCTTGCCAATTTACAAGAGAGGAGACCGCTGACTCTCTCACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148495.2 |
||
| 3UTR-3UTR CCA 90 bp | CCACAGAGGACAGCCCGAAGCTGGACCTGGAACAATCTCGCAAATAAGCATCTGTCTTCCTGCCTCTGTTaGTTTAAAATTAACATCTTC | + |
|
Preference number: 2 (lower is better) Translates to: PQRTARSWTWNNLANKHLSSCLC*FKINIF Trigger: GAAGATGTTAATTTTAAACCAACAGAGGCAGGAAGA...CAGATGCTTATTTGCGAGATTGTTCCAGGTCCAGCTTCGGGCTGTCCTCTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148495.2 |
||
| 3UTR CAA 90 bp | ACTACCTCATCAATGAGAAACAGTCGAACCAGTTGGATAAAAGAGTaGTCTCTCCACTTCCTAGTCACACTGTCCCACTTCTCTGTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: TTSSMRNSRTSWIKE*SLHFLVTLSHFSVN Trigger: GTTTACAGAGAAGTGGGACAGTGTGACTAGGAAGTGGAGAGACAACTCTTTTATCCAACTGGTTCGACTGTTTCTCATTGATGAGGTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148686.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCCATGGCAATGGTACTTCCATTAACAATCTTGTTATCGCTAGCTCAAACACTACTACTCCTTGCAGATaGACTCTTAGCACCCATGTG | + |
|
Preference number: 2 (lower is better) Translates to: SHGNGTSINNLVIASSNTTTPCR*TLSTHV Trigger: CACATGGGTGCTAAGAGTCCATCTGCAAGGAGTAGT...AGTGTTTGAGCTAGCGATAACAAGATTGTTAATGGAAGTACCATTGCCATGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148686.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTCAGATGGTCCCTGTTGAACTTTTCCATAGATTTCATGCTGATTCCTCTGTTTGGATCCTGTTGCAGTaGCTCTACCTGAGTAGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: IQMVPVELFHRFHADSSVWILLQ*LYLSSQ Trigger: CTGACTACTCAGGTAGAGCCACTGCAACAGGATCCA...AACAGAGGAATCAGCATGAAATCTATGGAAAAGTTCAACAGGGACCATCTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148495.2 |
||
| 3UTR CAA 90 bp | CAATCTTCATGTTTAGCCATGGCAATGGTACTTCCATTAACAATCTaGTTATCGCTAGCTCAAACACTACAGTTTTCCCAGAACCAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: QSSCLAMAMVLPLTI*LSLAQTLQFSQNQW Trigger: CCACTGGTTCTGGGAAAACTGTAGTGTTTGAGCTAGCGATAACAAGATTGTTAATGGAAGTACCATTGCCATGGCTAAACATGAAGATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148686.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCACATGCGTGTTTATTTTTACAGTGATGATGGCATTCTCTGTTCCCAGGTTTACTACACATGGTCACTaGCAGCATTATTGTGCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: STCVFIFTVMMAFSVPRFTTHGH*QHYCAF Trigger: GAAAGCACAATAATGCTGTCAGTGACCATGTGTAGT...AAACCTGGGAACAGAGAATGCCATCATCACTGTAAAAATAAACACGCATGTGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148495.2 |
||
| 3UTR CAA 90 bp | AGCTGCTCAAAGTTTCTTAATATAATGGTCACCAGTATTTCTGCCTaGATATCACTGTATCTTGCAATCTGCTCCACCTCAAGCTCATAC | + |
|
Preference number: 2 (lower is better) Translates to: SCSKFLNIMVTSISA*ISLYLAICSTSSSY Trigger: GTATGAGCTTGAGGTGGAGCAGATTGCAAGATACAGTGATATCAAGGCAGAAATACTGGTGACCATTATATTAAGAAACTTTGAGCAGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148495.2 |
||
| 3UTR CAA 90 bp | ATTCTTTCTGCCATTGGAAATCTGATAGTTATCCGGTTTGGGTCTTaGTTTAAGGTGTTCAGTATTCTCTTTTCACTTATCCTCAGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: ILSAIGNLIVIRFGS*FKVFSILFSLILSC Trigger: GCAGCTGAGGATAAGTGAAAAGAGAATACTGAACACCTTAAACAAAGACCCAAACCGGATAACTATCAGATTTCCAATGGCAGAAAGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148495.2 |
||
| 3UTR-3UTR TCA 90 bp | ATTCAGATGGTCCCTGTTGAACTTTTCCATAGATTTCATGCTGATTCCTCTGTTCCAGTATTTCTGCCTTaGTATCACTGTATCTTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: IQMVPVELFHRFHADSSVPVFLP*YHCILQ Trigger: TTGCAAGATACAGTGATATCAAGGCAGAAATACTGG...AACAGAGGAATCAGCATGAAATCTATGGAAAAGTTCAACAGGGACCATCTGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148495.2 |
||
| 3UTR-3UTR GCA 90 bp | ATTCAGATGGTCCCTGTTGAACTTTTCCATAGATTTCATGCTGATTCCTCTGTTGGTCACCAGTATTTCTaGCTTGATATCACTGTATCT | + |
|
Preference number: 2 (lower is better) Translates to: IQMVPVELFHRFHADSSVGHQYF*LDITVS Trigger: AGATACAGTGATATCAAGGCAGAAATACTGGTGACC...AACAGAGGAATCAGCATGAAATCTATGGAAAAGTTCAACAGGGACCATCTGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148495.2 |
||
| 3UTR CAA 90 bp | AACCATACATCAGCTTCCCAGCTACATGGGACATGTCATTGTTATTaGATCCTCCTAAATTTAGGTAATCCTGTTCATGTACATTATAGG | + |
|
Preference number: 2 (lower is better) Translates to: NHTSASQLHGTCHCY*ILLNLGNPVHVHYR Trigger: CCTATAATGTACATGAACAGGATTACCTAAATTTAGGAGGATCAAATAACAATGACATGTCCCATGTAGCTGGGAAGCTGATGTATGGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148686.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTGTGCAACTCCAATTTTACAGCAGTCATGTCCACATGCGTGTTTATTTTTACCCATCTTGCAATTCGTaGGCCATTTCTGAAAATCTT | + |
|
Preference number: 2 (lower is better) Translates to: FVQLQFYSSHVHMRVYFYPSCNS*AISENL Trigger: AAGATTTTCAGAAATGGCTCACGAATTGCAAGATGG...GTAAAAATAAACACGCATGTGGACATGACTGCTGTAAAATTGGAGTTGCACAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000148495.2 |
||
| 3UTR-3UTR GCA 90 bp | ACAAAATCTGACAACCATCTTGCAATTCGTGAGCCATTTCTGAAAATCTTCACTTCACTTATCCTCAGCTaGACATCTAGAAACTCATTG | + |
|
Preference number: 2 (lower is better) Translates to: TKSDNHLAIREPFLKIFTSLILS*TSRNSL Trigger: CAATGAGTTTCTAGATGTGCAGCTGAGGATAAGTGA...AGTGAAGATTTTCAGAAATGGCTCACGAATTGCAAGATGGTTGTCAGATTTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148495.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCACATGCGTGTTTATTTTTACAGTGATGATGGCATTCTCTGTTCCCAGGTTTAATTCTTTCTGCCATTaGAAATCTGATAGTTATCCG | + |
|
Preference number: 2 (lower is better) Translates to: STCVFIFTVMMAFSVPRFNSFCH*KSDSYP Trigger: CGGATAACTATCAGATTTCCAATGGCAGAAAGAATT...AAACCTGGGAACAGAGAATGCCATCATCACTGTAAAAATAAACACGCATGTGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148495.2 |
||
| 3UTR-3UTR TCA 90 bp | GAACTTCTTTGTCACGATATTCAGATGGTCCCTGTTGAACTTTTCCATAGATTTAGAAATATCTGTTTCTaGGCTTCTTTCCATAGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: ELLCHDIQMVPVELFHRFRNICF*ASFHSC Trigger: ACAGCTATGGAAAGAAGCTCAGAAACAGATATTTCT...AAATCTATGGAAAAGTTCAACAGGGACCATCTGAATATCGTGACAAAGAAGTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148495.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCAGAAGCAGAAAAAGCATCATTTGCTTTGAATTTGTTTGTAGAATACTGACGAGCTTCCCAGCTACATaGGACATGTCATTGTTATTT | + |
|
Preference number: 2 (lower is better) Translates to: SRSRKSIICFEFVCRILTSFPAT*DMSLLF Trigger: AAATAACAATGACATGTCCCATGTAGCTGGGAAGCT...CGTCAGTATTCTACAAACAAATTCAAAGCAAATGATGCTTTTTCTGCTTCTGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148686.8 |
||
| 3UTR GCA 72 bp | GGCAAGACTTGCATTCTCAGCCCGCTGAGGGATCTCTaGCACAGAGGACAGCCCGAAGCTGGACCTGGAACA | + |
|
Preference number: 3 (lower is better) Translates to: GKTCILSPLRDL*HRGQPEAGPGT Trigger: TGTTCCAGGTCCAGCTTCGGGCTGTCCTCTGTGGCAGAGATCCCTCAGCGGGCTGAGAATGCAAGTCTTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148495.2 |
||
| 3UTR CCA 72 bp | GGATCTCTGCCACAGAGGACAGCCCGAAGCTGGACCTaGAACAATCTCGCAAATAAGCATCTGGCTTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GSLPQRTARSWT*NNLANKHLASQ Trigger: CTGGGAAGCCAGATGCTTATTTGCGAGATTGTTCCAGGTCCAGCTTCGGGCTGTCCTCTGTGGCAGAGATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148495.2 |
||
| 3UTR CCA 72 bp | GCTGAGGGATCTCTGCCACAGAGGACAGCCCGAAGCTaGACCTGGAACAATCTCGCAAATAAGCATCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: AEGSLPQRTARS*TWNNLANKHLA Trigger: AGCCAGATGCTTATTTGCGAGATTGTTCCAGGTCCAGCTTCGGGCTGTCCTCTGTGGCAGAGATCCCTCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148495.2 |
||
| 3UTR TCA 72 bp | TCTTGTAAATTGGCAAGACTTGCATTCTCAGCCCGCTaGGGGATCTCTGCCACAGAGGACAGCCCGAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SCKLARLAFSAR*GISATEDSPKL Trigger: CAGCTTCGGGCTGTCCTCTGTGGCAGAGATCCCTCAGCGGGCTGAGAATGCAAGTCTTGCCAATTTACAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148495.2 |
||
| 3UTR CCA 72 bp | GAGCAAACAACAGAGCAGGACACACAGGAACCCTGCTaGCGAATACACCGTGACTACACATGGTCACTGACA | + |
|
Preference number: 3 (lower is better) Translates to: EQTTEQDTQEPC*RIHRDYTWSLT Trigger: TGTCAGTGACCATGTGTAGTCACGGTGTATTCGCCAGCAGGGTTCCTGTGTGTCCTGCTCTGTTGTTTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 ENSMUST00000148495.2 |
||
| 3UTR CCA 72 bp | GAAGCTGGACCTGGAACAATCTCGCAAATAAGCATCTaGCTTCCCAGGCGACGAAGCAAAACTGATGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: EAGPGTISQISI*LPRRRSKTDAA Trigger: GGCTGCATCAGTTTTGCTTCGTCGCCTGGGAAGCCAGATGCTTATTTGCGAGATTGTTCCAGGTCCAGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148495.2 |
||
| 3UTR TCA 72 bp | GCAGGACACACAGGAACCCTGCTGGCGAATACACCGTaGCTACACATGGTCACTGACAGCATTATTGTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: AGHTGTLLANTP*LHMVTDSIIVL Trigger: AAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCGCCAGCAGGGTTCCTGTGTGTCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 ENSMUST00000148495.2 |
||
| 3UTR GCA 72 bp | GCAATCTGCTCCACCTCAAGCTCATACTTCGGCAGATaGGCCACAGCTTCTTTTATCTGGGTCCCAAATGGT | + |
|
Preference number: 3 (lower is better) Translates to: AICSTSSSYFGR*ATASFIWVPNG Trigger: ACCATTTGGGACCCAGATAAAAGAAGCTGTGGCGCATCTGCCGAAGTATGAGCTTGAGGTGGAGCAGATTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148495.2 |
||
| 3UTR CCA 72 bp | CAGGAACCCTGCTGGCGAATACACCGTGACTACACATaGTCACTGACAGCATTATTGTGCTTTCTCAGACAT | + |
|
Preference number: 3 (lower is better) Translates to: QEPCWRIHRDYT*SLTALLCFLRH Trigger: ATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCGCCAGCAGGGTTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 ENSMUST00000148495.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTCCACCTCAAGCTCATACTTCGGCAGATGCGCCACAGCTTCTTTTATCTGGGACATCTAGAAACTCATaGCAGCTCGATATCATTGAA | + |
|
Preference number: 3 (lower is better) Translates to: APPQAHTSADAPQLLLSGTSRNS*QLDIIE Trigger: TTCAATGATATCGAGCTGCAATGAGTTTCTAGATGT...CCCAGATAAAAGAAGCTGTGGCGCATCTGCCGAAGTATGAGCTTGAGGTGGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148495.2 |
||
| 3UTR CCA 72 bp | TCCTTAAACTTGGGAGACTGTGGTGTTTTCTTAGAGTaGGCAAAGCACATCCTCTCAATCACTGGTGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SLNLGDCGVFLE*AKHILSITGER Trigger: TCTCTCACCAGTGATTGAGAGGATGTGCTTTGCCCACTCTAAGAAAACACCACAGTCTCCCAAGTTTAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148495.2 |
||
| 3UTR CCA 72 bp | TCATACTTCGGCAGATGCGCCACAGCTTCTTTTATCTaGGTCCCAAATGGTGGGTGTCTATTTAAAATCAGT | + |
|
Preference number: 3 (lower is better) Translates to: SYFGRCATASFI*VPNGGCLFKIS Trigger: ACTGATTTTAAATAGACACCCACCATTTGGGACCCAGATAAAAGAAGCTGTGGCGCATCTGCCGAAGTATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148495.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGAACCTAAGCCATTTGGGGTTATTCCTTGAATATCATGAGGCTGAGATGCAGCCACATCATGTAATTTaGTATCACCAGGACTACTCC | + |
|
Preference number: 3 (lower is better) Translates to: KNLSHLGLFLEYHEAEMQPHHVI*YHQDYS Trigger: GGAGTAGTCCTGGTGATACAAAATTACATGATGTGG...CTGCATCTCAGCCTCATGATATTCAAGGAATAACCCCAAATGGCTTAGGTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148686.8 |
||
| 3UTR CCA 72 bp | GTTCACACCCAGAACTTCTTTGTCACGATATTCAGATaGTCCCTGTTGAACTTTTCCATAGATTTCATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: VHTQNFFVTIFR*SLLNFSIDFML Trigger: CAGCATGAAATCTATGGAAAAGTTCAACAGGGACCATCTGAATATCGTGACAAAGAAGTTCTGGGTGTGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148495.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTGAAAGTGAACGTGTTTACTACCTCATCAATGAGAAACAGTCGAACCAGTATTTGGGGTTATTCCTaGAATATCATGAGGCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SLKVNVFTTSSMRNSRTSIWGYS*NIMRLR Trigger: TCTCAGCCTCATGATATTCAAGGAATAACCCCAAAT...ACTGGTTCGACTGTTTCTCATTGATGAGGTAGTAAACACGTTCACTTTCAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148686.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCACATGCGTGTTTATTTTTACAGTGATGATGGCATTCTCTGTTCCCAGGTTTTGCTGTTCTTTTAGTTaGCAGCTGCTCAAAGTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: STCVFIFTVMMAFSVPRFCCSFS*QLLKVS Trigger: AGAAACTTTGAGCAGCTGCAAACTAAAAGAACAGCA...AAACCTGGGAACAGAGAATGCCATCATCACTGTAAAAATAAACACGCATGTGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000148495.2 |
||
| 3UTR CCA 72 bp | TTTACTACCTCATCAATGAGAAACAGTCGAACCAGTTaGATAAAAGAGTTGTCTCTCCACTTCCTAGTCACA | + |
|
Preference number: 3 (lower is better) Translates to: FTTSSMRNSRTS*IKELSLHFLVT Trigger: TGTGACTAGGAAGTGGAGAGACAACTCTTTTATCCAACTGGTTCGACTGTTTCTCATTGATGAGGTAGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148686.8 |
||
| 3UTR CCA 72 bp | AATAAAAATATCCACTTCCTTAAACTTGGGAGACTGTaGTGTTTTCTTAGAGTGGGCAAAGCACATCCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: NKNIHFLKLGRL*CFLRVGKAHPL Trigger: GAGAGGATGTGCTTTGCCCACTCTAAGAAAACACCACAGTCTCCCAAGTTTAAGGAAGTGGATATTTTTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148495.2 |
||
| 3UTR-3UTR CAA 90 bp | TACCTCATCAATGAGAAACAGTCGAACCAGTTGGATAAAAGAGTTGTCTCTCCACTTCCATTAACAATCTaGTTATCGCTAGCTCAAACA | + |
|
Preference number: 3 (lower is better) Translates to: YLINEKQSNQLDKRVVSPLPLTI*LSLAQT Trigger: TGTTTGAGCTAGCGATAACAAGATTGTTAATGGAAG...TGGAGAGACAACTCTTTTATCCAACTGGTTCGACTGTTTCTCATTGATGAGGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148686.8 |
||
| 3UTR GCA 72 bp | AAGGTGTTCAGTATTCTCTTTTCACTTATCCTCAGCTaGACATCTAGAAACTCATTGCAGCTCGATATCATT | + |
|
Preference number: 3 (lower is better) Translates to: KVFSILFSLILS*TSRNSLQLDII Trigger: AATGATATCGAGCTGCAATGAGTTTCTAGATGTGCAGCTGAGGATAAGTGAAAAGAGAATACTGAACACCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148495.2 |
||
| 3UTR TCA 72 bp | AATCTGACAACCATCTTGCAATTCGTGAGCCATTTCTaGAAATCTTCACTGTATCTTGTGTCAAAGCAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: NLTTILQFVSHF*KSSLYLVSKQN Trigger: ATTTTGCTTTGACACAAGATACAGTGAAGATTTTCAGAAATGGCTCACGAATTGCAAGATGGTTGTCAGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148495.2 |
||
| 3UTR GCA 72 bp | TTTCACTTATCCTCAGCTGCACATCTAGAAACTCATTaGAGCTCGATATCATTGAAATTAAATCCAATAAAG | + |
|
Preference number: 3 (lower is better) Translates to: FHLSSAAHLETH*SSISLKLNPIK Trigger: CTTTATTGGATTTAATTTCAATGATATCGAGCTGCAATGAGTTTCTAGATGTGCAGCTGAGGATAAGTGAAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148495.2 |
||
| 3UTR CAA 72 bp | GAGTCAGCGGTCTCCTCTCTTGTAAATTGGCAAGACTaGCATTCTCAGCCCGCTGAGGGATCTCTGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: ESAVSSLVNWQD*HSQPAEGSLPQ Trigger: CTGTGGCAGAGATCCCTCAGCGGGCTGAGAATGCAAGTCTTGCCAATTTACAAGAGAGGAGACCGCTGACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148495.2 |
||
| CDS-3UTR GCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGAGCTCTCCCAATCATCTaGAGGATGTCGGTCTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRALPII*RMSVSL Trigger: CAGCGAGACCGACATCCTGCAGATGATTGGGAGAGC...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 ENSMUST00000148495.2 |
||
| CDS-3UTR CCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGATGGATCCTGTTGCAGTaGCTCTACCTGAGTAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRWILLQ*LYLSSQ Trigger: CTGACTACTCAGGTAGAGCCACTGCAACAGGATCCA...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR TCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACCCAGGACTACTTTCTaGAGTTTCACAGGTCTATGG | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRPRTTF*SFTGLW Trigger: CCATAGACCTGTGAAACTTCAGAAAGTAGTCCTGGG...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR GCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGAACAGAAGCAGCCTGCTaGACACCTTTCCTTGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRTEAAC*TPFLVE Trigger: TTCAACAAGGAAAGGTGTGCAGCAGGCTGCTTCTGT...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGAACTACTCCTTGCAGATaGACTCTTAGCACCCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRTTPCR*TLSTHV Trigger: CACATGGGTGCTAAGAGTCCATCTGCAAGGAGTAGT...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGAAGCTACAAATCTCACTaGAACAGGGCTGGCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRSYKSH*NRAGTF Trigger: GAAAGTGCCAGCCCTGTTCCAGTGAGATTTGTAGCT...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACTGACCTTGATATACTaGAAAGGGAAGGCCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRLTLIY*KGKALE Trigger: CTCCAAGGCCTTCCCTTTCCAGTATATCAAGGTCAG...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR TCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATGCACCTCATCAATaGGAAACAGTCGAACCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRHAPHQ*ETVEPV Trigger: AACTGGTTCGACTGTTTCTCATTGATGAGGTGCATG...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR TCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACACACCTTTCCTTGTTaGACAAAACACAAGTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRHTFPC*TKHKCG Trigger: CCCACACTTGTGTTTTGTTCAACAAGGAAAGGTGTG...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR GCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGAGAATATGCAGACTTCTaGAACCGTAGTTTCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLREYADF*NRSFCS Trigger: GGAGCAGAAACTACGGTTGCAGAAGTCTGCATATTC...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR GCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAAGCTCTCCCAATCATCTaGAGGATGTCGGTCTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKALPII*RMSVSL Trigger: CAGCGAGACCGACATCCTGCAGATGATTGGGAGAGC...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 ENSMUST00000148495.2 |
||
| CDS-3UTR CCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACGATATCCTCAGCATTaGGAATTGTTGCAGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRRYPQH*ELLQTQ Trigger: CTGTGTCTGCAACAATTCCCAATGCTGAGGATATCG...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGAACAGCTTCTTTTATCTaGGTCCCAAATGGTGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRTASFI*VPNGGC Trigger: ACACCCACCATTTGGGACCCAGATAAAAGAAGCTGT...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGAGGTGTTTTCTTAGAGTaGGCAAAGCACATCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRGVFLE*AKHILS Trigger: TGAGAGGATGTGCTTTGCCCACTCTAAGAAAACACC...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| 3UTR CAA 72 bp | TCAATGAGAAACAGTCGAACCAGTTGGATAAAAGAGTaGTCTCTCCACTTCCTAGTCACACTGTCCCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SMRNSRTSWIKE*SLHFLVTLSHF Trigger: GAAGTGGGACAGTGTGACTAGGAAGTGGAGAGACAACTCTTTTATCCAACTGGTTCGACTGTTTCTCATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148686.8 |
||
| CDS-3UTR TCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGAAATATCTGGAATTTCTaGAATCAGTGGAGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRNIWNF*NQWSRR Trigger: CCTCCTGCTCCACTGATTTCAGAAATTCCAGATATT...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR TCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGAAGATGCAGCAGGAAATaGTGGTGCTTTGAATATGTC | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRRCSRK*WCFEYV Trigger: GACATATTCAAAGCACCATCATTTCCTGCTGCATCT...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR GCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGATGCAACCGTAGTTTCTaGTCCACAGAGATGATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRCNRSF*STEMIN Trigger: GTTTATCATCTCTGTGGAGCAGAAACTACGGTTGCA...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR GCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGAGATATCACTGTATCTTaGAATCTGCTCCACCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRDITVS*NLLHLK Trigger: CTTGAGGTGGAGCAGATTGCAAGATACAGTGATATC...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR GCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGATGTCTCTTTGGAATCTaGTGCTTGACTTTTGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRCLFGI*CLTFGR Trigger: CCTTCCAAAAGTCAAGCAGCAGATTCCAAAGAGACA...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR GCA 90 bp | TACCTCATCAATGAGAAACAGTCGAACCAGTTGGATAAAAGAGTTGTCTCTCCACTCCCAATAAACGTGTaGAGAAGGATCCTGTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YLINEKQSNQLDKRVVSPLPINV*RRILLQ Trigger: CTGCAACAGGATCCTTCTGCACACGTTTATTGGGAG...TGGAGAGACAACTCTTTTATCCAACTGGTTCGACTGTTTCTCATTGATGAGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148686.8 |
||
| CDS-3UTR CCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGAAACAAAACACAAGTGTaGGCTTCTGATCGGAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRNKTQV*ASDRSM Trigger: CATACTCCGATCAGAAGCCCACACTTGTGTTTTGTT...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGAGGAAAGGGAAGGCCTTaGAGTAAAACCAAACTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRGKGRP*SKTKLF Trigger: AAAGAGTTTGGTTTTACTCCAAGGCCTTCCCTTTCC...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR TCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACCATCTTGCAATTCGTaGGCCATTTCTGAAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRPSCNS*AISENL Trigger: AAGATTTTCAGAAATGGCTCACGAATTGCAAGATGG...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR TCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACCAGTATTTCTGCCTTaGTATCACTGTATCTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRPVFLP*YHCILQ Trigger: TTGCAAGATACAGTGATATCAAGGCAGAAATACTGG...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR GCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGATCGAGTCATAATGACTaGAGTAGCTGTAGTGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRSSHND*SSCSVK Trigger: TTTGACACTACAGCTACTGCAGTCATTATGACTCGA...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR GCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGATTACAAGCTAGCATCTaGACGTACTTCTCTCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRLQASI*TYFSLV Trigger: TACAAGAGAGAAGTACGTGCAGATGCTAGCTTGTAA...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR GCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGATCACTTATCCTCAGCTaGACATCTAGAAACTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRSLILS*TSRNSL Trigger: CAATGAGTTTCTAGATGTGCAGCTGAGGATAAGTGA...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR GCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGAGGTCACCAGTATTTCTaGCTTGATATCACTGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRGHQYF*LDITVS Trigger: AGATACAGTGATATCAAGGCAGAAATACTGGTGACC...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR GCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGAGCAGTCATGTCCACATaGGTGTTTATTTTTACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRAVMST*VFIFTV Trigger: CACTGTAAAAATAAACACGCATGTGGACATGACTGC...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGAAGCTTCCCAGCTACATaGGACATGTCATTGTTATTT | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRSFPAT*DMSLLF Trigger: AAATAACAATGACATGTCCCATGTAGCTGGGAAGCT...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGATTGGGTAAGTTTCACTaGGCTGATATGAGAACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRLGKFH*ADMRTQ Trigger: TTGAGTTCTCATATCAGCCCAGTGAAACTTACCCAA...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGAAACAGTCGAACCAGTTaGATAAAAGAGTTGTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRNSRTS*IKELSL Trigger: GAGAGACAACTCTTTTATCCAACTGGTTCGACTGTT...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAATGGATCCTGTTGCAGTaGCTCTACCTGAGTAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKWILLQ*LYLSSQ Trigger: CTGACTACTCAGGTAGAGCCACTGCAACAGGATCCA...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR TCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGATTCACTGGGCTGATATaGGAACTCAAGTTTAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRFTGLI*ELKFKL Trigger: AAGTTTAAACTTGAGTTCTCATATCAGCCCAGTGAA...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR TCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAAAGGTCTCTCACCATCTaGAAGCCATTCTGCGATATC | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKRSLTI*KPFCDI Trigger: GATATCGCAGAATGGCTTTCAGATGGTGAGAGACCT...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR TCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAACCCAGGACTACTTTCTaGAGTTTCACAGGTCTATGG | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKPRTTF*SFTGLW Trigger: CCATAGACCTGTGAAACTTCAGAAAGTAGTCCTGGG...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR TCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGATTTGTTCAATCCAGATaGAAAACCATAGTGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRFVQSR*KTIVRW Trigger: CCATCTCACTATGGTTTTTCATCTGGATTGAACAAA...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR TCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGATTCGTGAGCCATTTCTaGAAATCTTCACTGTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRFVSHF*KSSLYL Trigger: AAGATACAGTGAAGATTTTCAGAAATGGCTCACGAA...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR TCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGAAGAAATATCTGTTTCTaGGCTTCTTTCCATAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRRNICF*ASFHSC Trigger: ACAGCTATGGAAAGAAGCTCAGAAACAGATATTTCT...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR GCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAAACAGAAGCAGCCTGCTaGACACCTTTCCTTGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKTEAAC*TPFLVE Trigger: TTCAACAAGGAAAGGTGTGCAGCAGGCTGCTTCTGT...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR GCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAAAGAACAGAAGCAGCCTaGTGCACACCTTTCCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKRTEAA*CTPFLV Trigger: AACAAGGAAAGGTGTGCAGCAGGCTGCTTCTGTTCT...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGAACAATTCAAGCCTACTaGTCCAAACTTTTCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRTIQAY*SKLFFP Trigger: TGGAAAGAAAAGTTTGGACCAGTAGGCTTGAATTGT...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAAAGCTACAAATCTCACTaGAACAGGGCTGGCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKSYKSH*NRAGTF Trigger: GAAAGTGCCAGCCCTGTTCCAGTGAGATTTGTAGCT...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGAAAAACCATAGTGAGATaGGTTTTTCAGAGCTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRKTIVR*VFQSSD Trigger: ATCAGAGCTCTGAAAAACCCATCTCACTATGGTTTT...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAACTGACCTTGATATACTaGAAAGGGAAGGCCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKLTLIY*KGKALE Trigger: CTCCAAGGCCTTCCCTTTCCAGTATATCAAGGTCAG...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAACTGCTGCTTGACTTTTaGAAGGGTAGCTTACTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKLLLDF*KGSLLP Trigger: CGGAAGTAAGCTACCCTTCCAAAAGTCAAGCAGCAG...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGATTTGAGTTGTCTCTTTaGAATCTGCTGCTTGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRFELSL*NLLLDF Trigger: AAAGTCAAGCAGCAGATTCCAAAGAGACAACTCAAA...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR TCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAACACACCTTTCCTTGTTaGACAAAACACAAGTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKHTFPC*TKHKCG Trigger: CCCACACTTGTGTTTTGTTCAACAAGGAAAGGTGTG...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR TCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAATGCAGTGGCTCTACCTaGGTAGTCAGAATGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKCSGST*VVRMRN Trigger: ATTTCTCATTCTGACTACTCAGGTAGAGCCACTGCA...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR GCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGAATTGCTACACGTCCATaGATTCTCTTTGCTTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRIATRP*ILFAYF Trigger: AAAATAAGCAAAGAGAATGCATGGACGTGTAGCAAT...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR GCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGAAAGGGCTTTTATTGGTaGCATGTAAACAATCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRKGFYW*HVNNLH Trigger: ATGAAGATTGTTTACATGGCACCAATAAAAGCCCTT...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR GCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGAAAGAAACAGCATCTCTaGTTTTTAAGTCAGACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRKKQHL*FLSQTD Trigger: ATCTGTCTGACTTAAAAAGCAGAGATGCTGTTTCTT...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGATACAACTTCAAGAGTTaGACCACGATTTTCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRYNFKS*TTIFIF Trigger: AAAGATGAAAATCGTGGTCCAACTCTTGAAGTTGTA...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAACGATATCCTCAGCATTaGGAATTGTTGCAGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKRYPQH*ELLQTQ Trigger: CTGTGTCTGCAACAATTCCCAATGCTGAGGATATCG...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGATCTTCCTGCCTCTGTTaGTTTAAAATTAACATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRSSCLC*FKINIF Trigger: GAAGATGTTAATTTTAAACCAACAGAGGCAGGAAGA...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CCA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGAAATTCTTTCTGCCATTaGAAATCTGATAGTTATCCG | + |
|
Preference number: 4 (lower is better) Translates to: RIHRDYTWSLTALLCFLRNSFCH*KSDSYP Trigger: CGGATAACTATCAGATTTCCAATGGCAGAAAGAATT...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAAACAGCTTCTTTTATCTaGGTCCCAAATGGTGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKTASFI*VPNGGC Trigger: ACACCCACCATTTGGGACCCAGATAAAAGAAGCTGT...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| 3UTR CAA 72 bp | TTCTGCTTACTATTGCTACACGTCCATGCATTCTCTTaGCTTATTTTCGTTTGGGTAAGTTTCACTGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FCLLLLHVHAFS*LIFVWVSFTGL Trigger: AAGCCCAGTGAAACTTACCCAAACGAAAATAAGCAAAGAGAATGCATGGACGTGTAGCAATAGTAAGCAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148686.8 |
||
| 3UTR CAA 72 bp | TGTTTAGCCATGGCAATGGTACTTCCATTAACAATCTaGTTATCGCTAGCTCAAACACTACAGTTTTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CLAMAMVLPLTI*LSLAQTLQFSQ Trigger: CTGGGAAAACTGTAGTGTTTGAGCTAGCGATAACAAGATTGTTAATGGAAGTACCATTGCCATGGCTAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148686.8 |
||
| CDS-3UTR TCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAAAGATGCAGCAGGAAATaGTGGTGCTTTGAATATGTC | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKRCSRK*WCFEYV Trigger: GACATATTCAAAGCACCATCATTTCCTGCTGCATCT...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR TCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAACAGTCATCAAACCGCTaGCTACAAAGGGCTTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKQSSNR*LQRAFI Trigger: AATAAAAGCCCTTTGTAGTCAGCGGTTTGATGACTG...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR TCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAAAACCAATTTTCTATCTaGCAGCTCCATTCCAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKNQFSI*QLHSSM Trigger: CATGCTGGAATGGAGCTGTCAGATAGAAAATTGGTT...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAAAACAAAACACAAGTGTaGGCTTCTGATCGGAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKNKTQV*ASDRSM Trigger: CATACTCCGATCAGAAGCCCACACTTGTGTTTTGTT...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAAGGCATAGTGGAAGTCTaGTGCTGTTCTTTTAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKGIVEV*CCSFSL Trigger: CAAACTAAAAGAACAGCACCAGACTTCCACTATGCC...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAAGGAAAGGGAAGGCCTTaGAGTAAAACCAAACTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKGKGRP*SKTKLF Trigger: AAAGAGTTTGGTTTTACTCCAAGGCCTTCCCTTTCC...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR TCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAACGAAGCAAAACTGTTTaGGTTGTCTCTTTGGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKRSKTV*VVSLES Trigger: AGATTCCAAAGAGACAACTCAAACAGTTTTGCTTCG...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR GCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAAAGCATTGGGAATTGTTaGAGACACAGCTACAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKSIGNC*RHSYKS Trigger: AGATTTGTAGCTGTGTCTGCAACAATTCCCAATGCT...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR GCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAATTACAAGCTAGCATCTaGACGTACTTCTCTCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKLQASI*TYFSLV Trigger: TACAAGAGAGAAGTACGTGCAGATGCTAGCTTGTAA...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR GCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAAGGTCACCAGTATTTCTaGCTTGATATCACTGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKGHQYF*LDITVS Trigger: AGATACAGTGATATCAAGGCAGAAATACTGGTGACC...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR GCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAAGCAGTCATGTCCACATaGGTGTTTATTTTTACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKAVMST*VFIFTV Trigger: CACTGTAAAAATAAACACGCATGTGGACATGACTGC...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAATTGGGTAAGTTTCACTaGGCTGATATGAGAACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKLGKFH*ADMRTQ Trigger: TTGAGTTCTCATATCAGCCCAGTGAAACTTACCCAA...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAAAACAGTCGAACCAGTTaGATAAAAGAGTTGTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKNSRTS*IKELSL Trigger: GAGAGACAACTCTTTTATCCAACTGGTTCGACTGTT...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAATCCTCTCTTGTAAATTaGCAAGACTTGCATTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKSSLVN*QDLHSQ Trigger: CTGAGAATGCAAGTCTTGCCAATTTACAAGAGAGGA...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| 3UTR CAA 72 bp | GCCATTGGAAATCTGATAGTTATCCGGTTTGGGTCTTaGTTTAAGGTGTTCAGTATTCTCTTTTCACTTATC | + |
|
Preference number: 4 (lower is better) Translates to: AIGNLIVIRFGS*FKVFSILFSLI Trigger: GATAAGTGAAAAGAGAATACTGAACACCTTAAACAAAGACCCAAACCGGATAACTATCAGATTTCCAATGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148495.2 |
||
| 3UTR CAA 72 bp | AAGTTTCTTAATATAATGGTCACCAGTATTTCTGCCTaGATATCACTGTATCTTGCAATCTGCTCCACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KFLNIMVTSISA*ISLYLAICSTS Trigger: TGAGGTGGAGCAGATTGCAAGATACAGTGATATCAAGGCAGAAATACTGGTGACCATTATATTAAGAAACTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148495.2 |
||
| CDS-3UTR TCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAAGAGAAACCAATCCAGTaGTTTTTCCTTAACTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKEKPIQ*FFLNWK Trigger: TTTCCAGTTAAGGAAAAATCACTGGATTGGTTTCTC...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR TCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAAGGTATCTTTCAGCTTTaGATCCCTTATAGAATATGC | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKGIFQL*IPYRIC Trigger: GCATATTCTATAAGGGATTCAAAGCTGAAAGATACC...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR TCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAATTTGTTCAATCCAGATaGAAAACCATAGTGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKFVQSR*KTIVRW Trigger: CCATCTCACTATGGTTTTTCATCTGGATTGAACAAA...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR TCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAATTCGTGAGCCATTTCTaGAAATCTTCACTGTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKFVSHF*KSSLYL Trigger: AAGATACAGTGAAGATTTTCAGAAATGGCTCACGAA...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR TCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAAAGAAATATCTGTTTCTaGGCTTCTTTCCATAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKRNICF*ASFHSC Trigger: ACAGCTATGGAAAGAAGCTCAGAAACAGATATTTCT...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAATTTGAGTTGTCTCTTTaGAATCTGCTGCTTGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKFELSL*NLLLDF Trigger: AAAGTCAAGCAGCAGATTCCAAAGAGACAACTCAAA...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR GCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAAATTGCTACACGTCCATaGATTCTCTTTGCTTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKIATRP*ILFAYF Trigger: AAAATAAGCAAAGAGAATGCATGGACGTGTAGCAAT...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR GCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAAAAGGGCTTTTATTGGTaGCATGTAAACAATCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKKGFYW*HVNNLH Trigger: ATGAAGATTGTTTACATGGCACCAATAAAAGCCCTT...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR GCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAAAAGAAACAGCATCTCTaGTTTTTAAGTCAGACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKKKQHL*FLSQTD Trigger: ATCTGTCTGACTTAAAAAGCAGAGATGCTGTTTCTT...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 36% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAAACAAAGGGCTTTTATTaGTGCCATGTAAACAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKTKGFY*CHVNNL Trigger: AAGATTGTTTACATGGCACCAATAAAAGCCCTTTGT...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CCA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAATACAACTTCAAGAGTTaGACCACGATTTTCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKYNFKS*TTIFIF Trigger: AAAGATGAAAATCGTGGTCCAACTCTTGAAGTTGTA...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS GCA 90 bp | GTAGCTGTAGTGTCAAACTGGGGTCTGCCAGCTCTCCCAATCATCTaGAGGATGTCGGTCTCGCTGTACTCTTCAAACACACCTCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: VAVVSNWGLPALPII*RMSVSLYSSNTPPL Trigger: CAGTGGAGGTGTGTTTGAAGAGTACAGCGAGACCGACATCCTGCAGATGATTGGGAGAGCTGGCAGACCCCAGTTTGACACTACAGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS GCA 90 bp | TCCCAGGCGACGAAGCAAAACTGTTTGAGTTGTCTCTTTGGAATCTaGTGCTTGACTTTTGGAAGGGTAGCTTACTTCCGCCGAGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: SQATKQNCLSCLFGI*CLTFGRVAYFRRDL Trigger: CAAGTCTCGGCGGAAGTAAGCTACCCTTCCAAAAGTCAAGCAGCAGATTCCAAAGAGACAACTCAAACAGTTTTGCTTCGTCGCCTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 ENSMUST00000155171.2 |
||
| CDS GCA 90 bp | CAGGCGACGAAGCAAAACTGTTTGAGTTGTCTCTTTGGAATCTGCTaGTTGACTTTTGGAAGGGTAGCTTACTTCCGCCGAGACTTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: QATKQNCLSCLFGIC*LTFGRVAYFRRDLN Trigger: ATTCAAGTCTCGGCGGAAGTAAGCTACCCTTCCAAAAGTCAAGCAGCAGATTCCAAAGAGACAACTCAAACAGTTTTGCTTCGTCGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 ENSMUST00000155171.2 |
||
| CDS CCA 90 bp | GCAAAACTGTTTGAGTTGTCTCTTTGGAATCTGCTGCTTGACTTTTaGAAGGGTAGCTTACTTCCGCCGAGACTTGAATCACGAGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: AKLFELSLWNLLLDF*KGSLLPPRLESRVS Trigger: AGACACTCGTGATTCAAGTCTCGGCGGAAGTAAGCTACCCTTCCAAAAGTCAAGCAGCAGATTCCAAAGAGACAACTCAAACAGTTTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 ENSMUST00000155171.2 |
||
| CDS-3UTR CAA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGAGCGATATCCTCAGCATaGGGAATTGTTGCAGACACA | + |
|
Preference number: 5 (lower is better) Translates to: RIHRDYTWSLTALLCFLRAISSA*GIVADT Trigger: TGTGTCTGCAACAATTCCCAATGCTGAGGATATCGC...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGATGGCTCTCATCCATTTaGAGACATACAGCAGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RIHRDYTWSLTALLCFLRWLSSI*RHTAGL Trigger: GAGACCTGCTGTATGTCTCAAAATGGATGAGAGCCA...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS TCA 90 bp | ACCATAGTGAGATGGGTTTTTCAGAGCTCTGATATACAGCATTGTTaGTCGGATCCAGTCCAGAGCAATGTTCACGTCTGTGATGGTATG | + |
|
Preference number: 5 (lower is better) Translates to: TIVRWVFQSSDIQHC*SDPVQSNVHVCDGM Trigger: CATACCATCACAGACGTGAACATTGCTCTGGACTGGATCCGATCAACAATGCTGTATATCAGAGCTCTGAAAAACCCATCTCACTATGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGAGCACACCTTTCCTTGTaGAACAAAACACAAGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RIHRDYTWSLTALLCFLRAHLSL*NKTQVW Trigger: CCACACTTGTGTTTTGTTCAACAAGGAAAGGTGTGC...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACTGTTCCCAGGTTTTTaGCAGGTAGCCATTCCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: RIHRDYTWSLTALLCFLRLFPGF*QVAIPL Trigger: TAAAGGAATGGCTACCTGCAAAAAACCTGGGAACAG...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGATCCACTTCCTTAAACTaGGGAGACTGTGGTGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RIHRDYTWSLTALLCFLRSTSLN*GDCGVF Trigger: GAAAACACCACAGTCTCCCAAGTTTAAGGAAGTGGA...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CTACACGTCCATGCATTCTCTTTGCTTATTTTCGTTTGGGTAAGTTTCACTGGGTGCAGAAGGATCCTGTaGCAGCGTCGTTCTTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LHVHAFSLLIFVWVSFTGCRRIL*QRRSCF Trigger: AAAACAAGAACGACGCTGCAACAGGATCCTTCTGCA...CCCAGTGAAACTTACCCAAACGAAAATAAGCAAAGAGAATGCATGGACGTGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148686.8 |
||
| CDS-3UTR CAA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACCACATCATGTAATTTaGTATCACCAGGACTACTCC | + |
|
Preference number: 5 (lower is better) Translates to: RIHRDYTWSLTALLCFLRPHHVI*YHQDYS Trigger: GGAGTAGTCCTGGTGATACAAAATTACATGATGTGG...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGAAGTTGGATAAAAGAGTaGTCTCTCCACTTCCTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: RIHRDYTWSLTALLCFLRSWIKE*SLHFLV Trigger: GACTAGGAAGTGGAGAGACAACTCTTTTATCCAACT...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGAGCAAAACTGTTTGAGTaGTCTCTTTGGAATCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RIHRDYTWSLTALLCFLRAKLFE*SLWNLL Trigger: CAGCAGATTCCAAAGAGACAACTCAAACAGTTTTGC...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACTCCTCTCTTGTAAATaGGCAAGACTTGCATTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RIHRDYTWSLTALLCFLRLLSCK*ARLAFS Trigger: TGAGAATGCAAGTCTTGCCAATTTACAAGAGAGGAG...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS CCA 90 bp | TCTTTAATAACATGCACCTCATCAATGAGAAACAGTCGAACCAGTTaGATAAAAGAGTTGTCTCTCCACTTCCTAGTCACACTGTCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SLITCTSSMRNSRTS*IKELSLHFLVTLSH Trigger: GTGGGACAGTGTGACTAGGAAGTGGAGAGACAACTCTTTTATCCAACTGGTTCGACTGTTTCTCATTGATGAGGTGCATGTTATTAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGAGTCCATGCATTCTCTTaGCTTATTTTCGTTTGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: RIHRDYTWSLTALLCFLRVHAFS*LIFVWV Trigger: TACCCAAACGAAAATAAGCAAAGAGAATGCATGGAC...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGAAAACAGTCGAACCAGTaGGATAAAAGAGTTGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RIHRDYTWSLTALLCFLRKQSNQ*DKRVVS Trigger: AGAGACAACTCTTTTATCCAACTGGTTCGACTGTTT...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACTACAACTTCAAGAGTaGGACCACGATTTTCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: RIHRDYTWSLTALLCFLRLQLQE*DHDFHL Trigger: AAGATGAAAATCGTGGTCCAACTCTTGAAGTTGTAG...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAACTTTACTGGATCCTGTaGCAGTGGCTCTACCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKLYWIL*QWLYLS Trigger: ACTCAGGTAGAGCCACTGCAACAGGATCCAGTAAAG...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGATTCAGATGGTCCCTGTaGAACTTTTCCATAGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: RIHRDYTWSLTALLCFLRFRWSL*NFSIDF Trigger: GAAATCTATGGAAAAGTTCAACAGGGACCATCTGAA...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAAGTAAATTGGCAAGACTaGCATTCTCAGCCCGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKVNWQD*HSQPAE Trigger: CTCAGCGGGCTGAGAATGCAAGTCTTGCCAATTTAC...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS TCA 90 bp | AATTCAGTTTGGCTACTACTACAGGGAAAACCCAGGACTACTTTCTaGAGTTTCACAGGTCTATGGCTCTCATCCATTTTGAGACATACA | + |
|
Preference number: 5 (lower is better) Translates to: NSVWLLLQGKPRTTF*SFTGLWLSSILRHT Trigger: TGTATGTCTCAAAATGGATGAGAGCCATAGACCTGTGAAACTTCAGAAAGTAGTCCTGGGTTTTCCCTGTAGTAGTAGCCAAACTGAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS TCA 90 bp | TCAATCCAGATGAAAAACCATAGTGAGATGGGTTTTTCAGAGCTCTaGTATACAGCATTGTTGATCGGATCCAGTCCAGAGCAATGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SIQMKNHSEMGFSEL*YTALLIGSSPEQCS Trigger: TGAACATTGCTCTGGACTGGATCCGATCAACAATGCTGTATATCAGAGCTCTGAAAAACCCATCTCACTATGGTTTTTCATCTGGATTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACTTCCATTAACAATCTaGTTATCGCTAGCTCAAACA | + |
|
Preference number: 5 (lower is better) Translates to: RIHRDYTWSLTALLCFLRLPLTI*LSLAQT Trigger: TGTTTGAGCTAGCGATAACAAGATTGTTAATGGAAG...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGATACAAAGGGCTTTTATaGGTGCCATGTAAACAATCT | + |
|
Preference number: 5 (lower is better) Translates to: RIHRDYTWSLTALLCFLRYKGLL*VPCKQS Trigger: AGATTGTTTACATGGCACCAATAAAAGCCCTTTGTA...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAAGCGATATCCTCAGCATaGGGAATTGTTGCAGACACA | + |
|
Preference number: 5 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKAISSA*GIVADT Trigger: TGTGTCTGCAACAATTCCCAATGCTGAGGATATCGC...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAATGGCTCTCATCCATTTaGAGACATACAGCAGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKWLSSI*RHTAGL Trigger: GAGACCTGCTGTATGTCTCAAAATGGATGAGAGCCA...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CGAATACACCGTGACTACACATGGTCACTGACAGCATTATTGTGCTTTCTCAGAACATCTAGAAACTCATaGCAGCTCGATATCATTGAA | + |
|
Preference number: 5 (lower is better) Translates to: RIHRDYTWSLTALLCFLRTSRNS*QLDIIE Trigger: TTCAATGATATCGAGCTGCAATGAGTTTCTAGATGT...TCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTGTAGTCACGGTGTATTCG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAACAGCATTGGGAATTGTaGCAGACACAGCTACAAATC | + |
|
Preference number: 5 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKQHWEL*QTQLQI Trigger: GATTTGTAGCTGTGTCTGCAACAATTCCCAATGCTG...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAAGCTGCACACCTTTCCTaGTTGAACAAAACACAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKAAHLS*LNKTQV Trigger: CACTTGTGTTTTGTTCAACAAGGAAAGGTGTGCAGC...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAACTGTTCCCAGGTTTTTaGCAGGTAGCCATTCCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKLFPGF*QVAIPL Trigger: TAAAGGAATGGCTACCTGCAAAAAACCTGGGAACAG...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAATGTATCTTGAGTCGCTaGGCTAGAGGAAGAGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKCILSR*ARGREE Trigger: TTCTTCTCTTCCTCTAGCCAAGCGACTCAAGATACA...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAATTTGGAATCTGCTGCTaGACTTTTGGAAGGGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKFGICC*TFGRVA Trigger: AGCTACCCTTCCAAAAGTCAAGCAGCAGATTCCAAA...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAATCCACTTCCTTAAACTaGGGAGACTGTGGTGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKSTSLN*GDCGVF Trigger: GAAAACACCACAGTCTCCCAAGTTTAAGGAAGTGGA...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS GCA 90 bp | TTTGAATCCCTTATAGAATATGCAGACTTCTGCAACCGTAGTTTCTaGTCCACAGAGATGATAAACTTAGCATCCTTCACAAGAACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: FESLIEYADFCNRSF*STEMINLASFTRTE Trigger: TTCTGTTCTTGTGAAGGATGCTAAGTTTATCATCTCTGTGGAGCAGAAACTACGGTTGCAGAAGTCTGCATATTCTATAAGGGATTCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAACCACATCATGTAATTTaGTATCACCAGGACTACTCC | + |
|
Preference number: 5 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKPHHVI*YHQDYS Trigger: GGAGTAGTCCTGGTGATACAAAATTACATGATGTGG...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAAAGTTGGATAAAAGAGTaGTCTCTCCACTTCCTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKSWIKE*SLHFLV Trigger: GACTAGGAAGTGGAGAGACAACTCTTTTATCCAACT...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAAGCAAAACTGTTTGAGTaGTCTCTTTGGAATCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKAKLFE*SLWNLL Trigger: CAGCAGATTCCAAAGAGACAACTCAAACAGTTTTGC...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAACTCCTCTCTTGTAAATaGGCAAGACTTGCATTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKLLSCK*ARLAFS Trigger: TGAGAATGCAAGTCTTGCCAATTTACAAGAGAGGAG...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS TCA 90 bp | ACACTGTCCCACTTCTCTGGAGTTGTTATAATTATATTTGCATGCTaGATCTCAAACAGGTCATCCATTACTGTATCACCAGTAAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TLSHFSGVVIIIFAC*ISNRSSITVSPVSS Trigger: AGAACTTACTGGTGATACAGTAATGGATGACCTGTTTGAGATTCAGCATGCAAATATAATTATAACAACTCCAGAGAAGTGGGACAGTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 ENSMUST00000200249.2 |
||
| CDS-3UTR CAA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAAGTCCATGCATTCTCTTaGCTTATTTTCGTTTGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKVHAFS*LIFVWV Trigger: TACCCAAACGAAAATAAGCAAAGAGAATGCATGGAC...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAAATTTGGGGTTATTCCTaGAATATCATGAGGCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKIWGYS*NIMRLR Trigger: TCTCAGCCTCATGATATTCAAGGAATAACCCCAAAT...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAAAAACAGTCGAACCAGTaGGATAAAAGAGTTGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKKQSNQ*DKRVVS Trigger: AGAGACAACTCTTTTATCCAACTGGTTCGACTGTTT...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 38% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAACTACAACTTCAAGAGTaGGACCACGATTTTCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKLQLQE*DHDFHL Trigger: AAGATGAAAATCGTGGTCCAACTCTTGAAGTTGTAG...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAAACCAGTATTTCTGCCTaGATATCACTGTATCTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKTSISA*ISLYLA Trigger: TGCAAGATACAGTGATATCAAGGCAGAAATACTGGT...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAATGCTGTTCTTTTAGTTaGCAGCTGCTCAAAGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKCCSFS*QLLKVS Trigger: AGAAACTTTGAGCAGCTGCAAACTAAAAGAACAGCA...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAATTCAGATGGTCCCTGTaGAACTTTTCCATAGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKFRWSL*NFSIDF Trigger: GAAATCTATGGAAAAGTTCAACAGGGACCATCTGAA...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAACTTCCATTAACAATCTaGTTATCGCTAGCTCAAACA | + |
|
Preference number: 5 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKLPLTI*LSLAQT Trigger: TGTTTGAGCTAGCGATAACAAGATTGTTAATGGAAG...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAATACAAAGGGCTTTTATaGGTGCCATGTAAACAATCT | + |
|
Preference number: 5 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKYKGLL*VPCKQS Trigger: AGATTGTTTACATGGCACCAATAAAAGCCCTTTGTA...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAAGCTTCAATCCCATCTTaGTTCAATCCAGATGAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKASIPS*FNPDEK Trigger: TTTTTCATCTGGATTGAACAAAGATGGGATTGAAGC...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS-3UTR CAA 90 bp | CACATGGTCACTGACAGCATTATTGTGCTTTCTCAGACATCTTTCTTAAGAAAAACATCTAGAAACTCATaGCAGCTCGATATCATTGAA | + |
|
Preference number: 5 (lower is better) Translates to: HMVTDSIIVLSQTSFLRKTSRNS*QLDIIE Trigger: TTCAATGATATCGAGCTGCAATGAGTTTCTAGATGT...TTTTCTTAAGAAAGATGTCTGAGAAAGCACAATAATGCTGTCAGTGACCATGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS GCA 72 bp | GTGTCAAACTGGGGTCTGCCAGCTCTCCCAATCATCTaGAGGATGTCGGTCTCGCTGTACTCTTCAAACACA | + |
|
Preference number: 6 (lower is better) Translates to: VSNWGLPALPII*RMSVSLYSSNT Trigger: TGTGTTTGAAGAGTACAGCGAGACCGACATCCTGCAGATGATTGGGAGAGCTGGCAGACCCCAGTTTGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS CCA 72 bp | CGAGTCATAATGACTGCAGTAGCTGTAGTGTCAAACTaGGGTCTGCCAGCTCTCCCAATCATCTGCAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: RVIMTAVAVVSN*GLPALPIICRM Trigger: CATCCTGCAGATGATTGGGAGAGCTGGCAGACCCCAGTTTGACACTACAGCTACTGCAGTCATTATGACTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS CAA 90 bp | ATCTGCTGCTTGACTTTTGGAAGGGTAGCTTACTTCCGCCGAGACTaGAATCACGAGTGTCTCCAAATCCTGATGCAGCCATCTTCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: ICCLTFGRVAYFRRD*NHECLQILMQPSSQ Trigger: CTGAGAAGATGGCTGCATCAGGATTTGGAGACACTCGTGATTCAAGTCTCGGCGGAAGTAAGCTACCCTTCCAAAAGTCAAGCAGCAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 ENSMUST00000155171.2 |
||
| CDS CAA 72 bp | TCACAAGAACAGAAGCAGCCTGCTGCACACCTTTCCTaGTTGAACAAAACACAAGTGTGGGCTTCTGATCGG | + |
|
Preference number: 6 (lower is better) Translates to: SQEQKQPAAHLS*LNKTQVWASDR Trigger: CCGATCAGAAGCCCACACTTGTGTTTTGTTCAACAAGGAAAGGTGTGCAGCAGGCTGCTTCTGTTCTTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS CAA 72 bp | TTGACTTTTGGAAGGGTAGCTTACTTCCGCCGAGACTaGAATCACGAGTGTCTCCAAATCCTGATGCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LTFGRVAYFRRD*NHECLQILMQP Trigger: TGGCTGCATCAGGATTTGGAGACACTCGTGATTCAAGTCTCGGCGGAAGTAAGCTACCCTTCCAAAAGTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 ENSMUST00000155171.2 |
||
| CDS CAA 72 bp | CAAGCTCTCCCAATAAACGTGTGCAGAAGGATCCTGTaGCAGCGTCGTTCTTGTTTTCAGTTTCATCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: QALPINVCRRIL*QRRSCFQFHLG Trigger: GCCCAGATGAAACTGAAAACAAGAACGACGCTGCAACAGGATCCTTCTGCACACGTTTATTGGGAGAGCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148686.8 |
||
| CDS CAA 90 bp | CACCATCTGAAAGCCATTCTGCGATATCCTCAGCATTGGGAATTGTaGCAGACACAGCTACAAATCTCACTGGAACAGGGCTGGCACTTT | + |
|
Preference number: 6 (lower is better) Translates to: HHLKAILRYPQHWEL*QTQLQISLEQGWHF Trigger: AAAGTGCCAGCCCTGTTCCAGTGAGATTTGTAGCTGTGTCTGCAACAATTCCCAATGCTGAGGATATCGCAGAATGGCTTTCAGATGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS CAA 90 bp | GCGACGAAGCAAAACTGTTTGAGTTGTCTCTTTGGAATCTGCTGCTaGACTTTTGGAAGGGTAGCTTACTTCCGCCGAGACTTGAATCAC | + |
|
Preference number: 6 (lower is better) Translates to: ATKQNCLSCLFGICC*TFGRVAYFRRDLNH Trigger: GTGATTCAAGTCTCGGCGGAAGTAAGCTACCCTTCCAAAAGTCAAGCAGCAGATTCCAAAGAGACAACTCAAACAGTTTTGCTTCGTCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 ENSMUST00000155171.2 |
||
| CDS CAA 90 bp | CTCGCAAATAAGCATCTGGCTTCCCAGGCGACGAAGCAAAACTGTTaGAGTTGTCTCTTTGGAATCTGCTGCTTGACTTTTGGAAGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: LANKHLASQATKQNC*SCLFGICCLTFGRV Trigger: TACCCTTCCAAAAGTCAAGCAGCAGATTCCAAAGAGACAACTCAAACAGTTTTGCTTCGTCGCCTGGGAAGCCAGATGCTTATTTGCGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 ENSMUST00000155171.2 |
||
| CDS CAA 72 bp | AAAGCCATTCTGCGATATCCTCAGCATTGGGAATTGTaGCAGACACAGCTACAAATCTCACTGGAACAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: KAILRYPQHWEL*QTQLQISLEQG Trigger: GCCCTGTTCCAGTGAGATTTGTAGCTGTGTCTGCAACAATTCCCAATGCTGAGGATATCGCAGAATGGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS CAA 72 bp | TCTGGCTTCCCAGGCGACGAAGCAAAACTGTTTGAGTaGTCTCTTTGGAATCTGCTGCTTGACTTTTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SGFPGDEAKLFE*SLWNLLLDFWK Trigger: CTTCCAAAAGTCAAGCAGCAGATTCCAAAGAGACAACTCAAACAGTTTTGCTTCGTCGCCTGGGAAGCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 ENSMUST00000155171.2 |
||
| CDS CAA 90 bp | TGCACCTCATCAATGAGAAACAGTCGAACCAGTTGGATAAAAGAGTaGTCTCTCCACTTCCTAGTCACACTGTCCCACTTCTCTGGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: CTSSMRNSRTSWIKE*SLHFLVTLSHFSGV Trigger: AACTCCAGAGAAGTGGGACAGTGTGACTAGGAAGTGGAGAGACAACTCTTTTATCCAACTGGTTCGACTGTTTCTCATTGATGAGGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS CCA 72 bp | CACCATCTGAAAGCCATTCTGCGATATCCTCAGCATTaGGAATTGTTGCAGACACAGCTACAAATCTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: HHLKAILRYPQH*ELLQTQLQISL Trigger: CAGTGAGATTTGTAGCTGTGTCTGCAACAATTCCCAATGCTGAGGATATCGCAGAATGGCTTTCAGATGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS CAA 72 bp | CTGAAAGCCATTCTGCGATATCCTCAGCATTGGGAATaGTTGCAGACACAGCTACAAATCTCACTGGAACAG | + |
|
Preference number: 6 (lower is better) Translates to: LKAILRYPQHWE*LQTQLQISLEQ Trigger: CTGTTCCAGTGAGATTTGTAGCTGTGTCTGCAACAATTCCCAATGCTGAGGATATCGCAGAATGGCTTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS CAA 72 bp | CAAAACTGTTTGAGTTGTCTCTTTGGAATCTGCTGCTaGACTTTTGGAAGGGTAGCTTACTTCCGCCGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: QNCLSCLFGICC*TFGRVAYFRRD Trigger: GTCTCGGCGGAAGTAAGCTACCCTTCCAAAAGTCAAGCAGCAGATTCCAAAGAGACAACTCAAACAGTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 ENSMUST00000155171.2 |
||
| CDS CAA 72 bp | AAGCATCTGGCTTCCCAGGCGACGAAGCAAAACTGTTaGAGTTGTCTCTTTGGAATCTGCTGCTTGACTTTT | + |
|
Preference number: 6 (lower is better) Translates to: KHLASQATKQNC*SCLFGICCLTF Trigger: AAAAGTCAAGCAGCAGATTCCAAAGAGACAACTCAAACAGTTTTGCTTCGTCGCCTGGGAAGCCAGATGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 ENSMUST00000155171.2 |
||
| CDS TCA 72 bp | ATCCATTTTGAGACATACAGCAGGTCTCTCACCATCTaGAAGCCATTCTGCGATATCCTCAGCATTGGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: IHFETYSRSLTI*KPFCDILSIGN Trigger: ATTCCCAATGCTGAGGATATCGCAGAATGGCTTTCAGATGGTGAGAGACCTGCTGTATGTCTCAAAATGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS TCA 72 bp | TGGCTACTACTACAGGGAAAACCCAGGACTACTTTCTaGAGTTTCACAGGTCTATGGCTCTCATCCATTTTG | + |
|
Preference number: 6 (lower is better) Translates to: WLLLQGKPRTTF*SFTGLWLSSIL Trigger: CAAAATGGATGAGAGCCATAGACCTGTGAAACTTCAGAAAGTAGTCCTGGGTTTTCCCTGTAGTAGTAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS GCA 72 bp | ACGAAGCAAAACTGTTTGAGTTGTCTCTTTGGAATCTaGTGCTTGACTTTTGGAAGGGTAGCTTACTTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: TKQNCLSCLFGI*CLTFGRVAYFR Trigger: GCGGAAGTAAGCTACCCTTCCAAAAGTCAAGCAGCAGATTCCAAAGAGACAACTCAAACAGTTTTGCTTCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 ENSMUST00000155171.2 |
||
| CDS CCA 72 bp | TTTGAGTTGTCTCTTTGGAATCTGCTGCTTGACTTTTaGAAGGGTAGCTTACTTCCGCCGAGACTTGAATCA | + |
|
Preference number: 6 (lower is better) Translates to: FELSLWNLLLDF*KGSLLPPRLES Trigger: TGATTCAAGTCTCGGCGGAAGTAAGCTACCCTTCCAAAAGTCAAGCAGCAGATTCCAAAGAGACAACTCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 ENSMUST00000155171.2 |
||
| CDS CCA 72 bp | ACATGCACCTCATCAATGAGAAACAGTCGAACCAGTTaGATAAAAGAGTTGTCTCTCCACTTCCTAGTCACA | + |
|
Preference number: 6 (lower is better) Translates to: TCTSSMRNSRTS*IKELSLHFLVT Trigger: TGTGACTAGGAAGTGGAGAGACAACTCTTTTATCCAACTGGTTCGACTGTTTCTCATTGATGAGGTGCATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS CAA 90 bp | TCTCCCAATAAACGTGTGCAGAAGGATCCTGTTGCAGCGTCGTTCTaGTTTTCAGTTTCATCTGGGCTACTGAAAAACAAATTATCCATG | + |
|
Preference number: 6 (lower is better) Translates to: SPNKRVQKDPVAASF*FSVSSGLLKNKLSM Trigger: CATGGATAATTTGTTTTTCAGTAGCCCAGATGAAACTGAAAACAAGAACGACGCTGCAACAGGATCCTTCTGCACACGTTTATTGGGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148686.8 |
||
| CDS GCA 72 bp | ATAAACTTAGCATCCTTCACAAGAACAGAAGCAGCCTaGTGCACACCTTTCCTTGTTGAACAAAACACAAGT | + |
|
Preference number: 6 (lower is better) Translates to: INLASFTRTEAA*CTPFLVEQNTS Trigger: ACTTGTGTTTTGTTCAACAAGGAAAGGTGTGCAGCAGGCTGCTTCTGTTCTTGTGAAGGATGCTAAGTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS CAA 72 bp | GCTACACGTCCATGCATTCTCTTTGCTTATTTTCGTTaGGGTAAGTTTCACTGGGCTGATATGAGAACTCAA | + |
|
Preference number: 6 (lower is better) Translates to: ATRPCILFAYFR*GKFHWADMRTQ Trigger: TTGAGTTCTCATATCAGCCCAGTGAAACTTACCCAAACGAAAATAAGCAAAGAGAATGCATGGACGTGTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 ENSMUST00000200249.2 |
||
| CDS CAA 72 bp | TTCTGCTTACTATTGCTACACGTCCATGCATTCTCTTaGCTTATTTTCGTTTGGGTAAGTTTCACTGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: FCLLLLHVHAFS*LIFVWVSFTGL Trigger: CAGCCCAGTGAAACTTACCCAAACGAAAATAAGCAAAGAGAATGCATGGACGTGTAGCAATAGTAAGCAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 ENSMUST00000200249.2 |
||
| CDS TCA 72 bp | CCTTTCCTTGTTGAACAAAACACAAGTGTGGGCTTCTaGTCGGAGTATGTTCGAATAACACTGTACACTTTA | + |
|
Preference number: 6 (lower is better) Translates to: PFLVEQNTSVGF*SEYVRITLYTL Trigger: TAAAGTGTACAGTGTTATTCGAACATACTCCGATCAGAAGCCCACACTTGTGTTTTGTTCAACAAGGAAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS TCA 72 bp | GTAACCAACACCATATACCAAGGTATCTTTCAGCTTTaGATCCCTTATAGAATATGCAGACTTCTGCAACCG | + |
|
Preference number: 6 (lower is better) Translates to: VTNTIYQGIFQL*IPYRICRLLQP Trigger: CGGTTGCAGAAGTCTGCATATTCTATAAGGGATTCAAAGCTGAAAGATACCTTGGTATATGGTGTTGGTTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS GCA 72 bp | CTTATAGAATATGCAGACTTCTGCAACCGTAGTTTCTaGTCCACAGAGATGATAAACTTAGCATCCTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: LIEYADFCNRSF*STEMINLASFT Trigger: TGTGAAGGATGCTAAGTTTATCATCTCTGTGGAGCAGAAACTACGGTTGCAGAAGTCTGCATATTCTATAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS CAA 90 bp | ACTGTACACTTTATAGTTGAGGGCCAAATCAAACTTAAATTCAGTTaGGCTACTACTACAGGGAAAACCCAGGACTACTTTCTGAAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: TVHFIVEGQIKLKFS*ATTTGKTQDYFLKF Trigger: AAACTTCAGAAAGTAGTCCTGGGTTTTCCCTGTAGTAGTAGCCAAACTGAATTTAAGTTTGATTTGGCCCTCAACTATAAAGTGTACAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS CAA 72 bp | TTTATAGTTGAGGGCCAAATCAAACTTAAATTCAGTTaGGCTACTACTACAGGGAAAACCCAGGACTACTTT | + |
|
Preference number: 6 (lower is better) Translates to: FIVEGQIKLKFS*ATTTGKTQDYF Trigger: AAAGTAGTCCTGGGTTTTCCCTGTAGTAGTAGCCAAACTGAATTTAAGTTTGATTTGGCCCTCAACTATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS CCA 72 bp | TACAGTTTTCATTCTGCTAACTACAACTTCAAGAGTTaGACCACGATTTTCATCTTTAATAACATGCACCTC | + |
|
Preference number: 6 (lower is better) Translates to: YSFHSANYNFKS*TTIFIFNNMHL Trigger: GAGGTGCATGTTATTAAAGATGAAAATCGTGGTCCAACTCTTGAAGTTGTAGTTAGCAGAATGAAAACTGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112690.10 ENSMUST00000117588.8 |
||
| CDS TCA 72 bp | ACAATGATATGCATCTTGCAATTCGTGAGCCATTTCTaGAAATCTTCACTGTATCTTGTGTCAAAGCAAAAT | + |
|
Preference number: 6 (lower is better) Translates to: TMICILQFVSHF*KSSLYLVSKQN Trigger: ATTTTGCTTTGACACAAGATACAGTGAAGATTTTCAGAAATGGCTCACGAATTGCAAGATGCATATCATTGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155171.2 |
||