Pregenerated sensors for HEYL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032744Ensembl transcript IDs: ENSMUST00000040821.5
Found 164 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACTCCAAGGCCAGCACGCTTGCGTCTCCTCTGGCCAGGGCCTTCTaGCCATTCTGCCAGAACCCCCAGTCCTTTGGCCCTGGCTCTCCT | + |
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Preference number: 1 (lower is better) Translates to: HSKASTLASPLARAF*PFCQNPQSFGPGSP Trigger: AGGAGAGCCAGGGCCAAAGGACTGGGGGTTCTGGCAGAATGGTCAGAAGGCCCTGGCCAGAGGAGACGCAAGCGTGCTGGCCTTGGAGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR GCA 90 bp | GCCGGCCAGCTCAGCTGTCAGCATTCACTCCAAGGCCAGCACGCTTaGGTCTCCTCTGGCCAGGGCCTTCTGACCATTCTGCCAGAACCC | + |
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Preference number: 1 (lower is better) Translates to: AGQLSCQHSLQGQHA*VSSGQGLLTILPEP Trigger: GGGTTCTGGCAGAATGGTCAGAAGGCCCTGGCCAGAGGAGACGCAAGCGTGCTGGCCTTGGAGTGAATGCTGACAGCTGAGCTGGCCGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR CCA 90 bp | AGGCAGCTCGTATGTCTGGTGCTGAATCCCAAGGGAATGACTCTTTaGGAGGTGCCACCATGGGGCCGCTGGTCCTCCAACCTGGGAACC | + |
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Preference number: 1 (lower is better) Translates to: RQLVCLVLNPKGMTL*EVPPWGRWSSNLGT Trigger: GGTTCCCAGGTTGGAGGACCAGCGGCCCCATGGTGGCACCTCCCAAAGAGTCATTCCCTTGGGATTCAGCACCAGACATACGAGCTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR CCA 90 bp | GCACTGTGCTCAATGCTGGGTGCAGATGGGAGCACAGGCCAGCTCTaGCCCCTGGCCTCATTGAGCTTACGTTCCGGTGGGGAATATACC | + |
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Preference number: 1 (lower is better) Translates to: ALCSMLGADGSTGQL*PLASLSLRSGGEYT Trigger: GGTATATTCCCCACCGGAACGTAAGCTCAATGAGGCCAGGGGCCAGAGCTGGCCTGTGCTCCCATCTGCACCCAGCATTGAGCACAGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR CCA 90 bp | CAGCTGTCAGCATTCACTCCAAGGCCAGCACGCTTGCGTCTCCTCTaGCCAGGGCCTTCTGACCATTCTGCCAGAACCCCCAGTCCTTTG | + |
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Preference number: 1 (lower is better) Translates to: QLSAFTPRPARLRLL*PGPSDHSARTPSPL Trigger: CAAAGGACTGGGGGTTCTGGCAGAATGGTCAGAAGGCCCTGGCCAGAGGAGACGCAAGCGTGCTGGCCTTGGAGTGAATGCTGACAGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR GCA 90 bp | AGAGACCCGAATATCTGGGGACTTCAATCGCCTCCTCTCCCCACTTaGAGGAGCCTGCAGGAGCGTCCTTCTGTCCCTGTGTCTGTCTCC | + |
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Preference number: 1 (lower is better) Translates to: RDPNIWGLQSPPLPT*RSLQERPSVPVSVS Trigger: GGAGACAGACACAGGGACAGAAGGACGCTCCTGCAGGCTCCTGCAAGTGGGGAGAGGAGGCGATTGAAGTCCCCAGATATTCGGGTCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR CCA 90 bp | CCCCTCCTCCAAGTTATTTTTATCCAGCCTGACAGCCCTTGGCTGTaGCAGCAGTCTGGGCTCTGGGAGCCGGATGCAAACCAGGCAGCT | + |
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Preference number: 1 (lower is better) Translates to: PLLQVIFIQPDSPWL*QQSGLWEPDANQAA Trigger: AGCTGCCTGGTTTGCATCCGGCTCCCAGAGCCCAGACTGCTGCCACAGCCAAGGGCTGTCAGGCTGGATAAAAATAACTTGGAGGAGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR CCA 90 bp | CAGGGCCTTCTGACCATTCTGCCAGAACCCCCAGTCCTTTGGCCCTaGCTCTCCTGTCTCCTCTCAAAGTCAGCCAGCAGGAATGGCAGT | + |
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Preference number: 1 (lower is better) Translates to: QGLLTILPEPPVLWP*LSCLLSKSASRNGS Trigger: ACTGCCATTCCTGCTGGCTGACTTTGAGAGGAGACAGGAGAGCCAGGGCCAAAGGACTGGGGGTTCTGGCAGAATGGTCAGAAGGCCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR CCA 90 bp | TTGAGTTCTCAGCTGGGTGGGGGTAGGGTGGCCCTCTCAGTCTCCTaGGAGAACGAACCCAAGGCCAATCAGGATGGATGCTCAAAGGGT | + |
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Preference number: 1 (lower is better) Translates to: LSSQLGGGRVALSVS*ENEPKANQDGCSKG Trigger: ACCCTTTGAGCATCCATCCTGATTGGCCTTGGGTTCGTTCTCCCAGGAGACTGAGAGGGCCACCCTACCCCCACCCAGCTGAGAACTCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR GCA 90 bp | AGTCAGCCAGCAGGAATGGCAGTGGAACTCACCCCTAGCGGAGTCTaGCAGCCACAGCAGGAAACAAGAAGCCTTCTCACCTCCTTGATC | + |
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Preference number: 1 (lower is better) Translates to: SQPAGMAVELTPSGV*QPQQETRSLLTSLI Trigger: GATCAAGGAGGTGAGAAGGCTTCTTGTTTCCTGCTGTGGCTGGCAGACTCCGCTAGGGGTGAGTTCCACTGCCATTCCTGCTGGCTGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR TCA 90 bp | TGGGTGCAGATGGGAGCACAGGCCAGCTCTGGCCCCTGGCCTCATTaGGCTTACGTTCCGGTGGGGAATATACCTAATCAAGTGGACATA | + |
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Preference number: 1 (lower is better) Translates to: WVQMGAQASSGPWPH*AYVPVGNIPNQVDI Trigger: TATGTCCACTTGATTAGGTATATTCCCCACCGGAACGTAAGCTCAATGAGGCCAGGGGCCAGAGCTGGCCTGTGCTCCCATCTGCACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR TCA 90 bp | CACCATGTAACTCATCTGCGCCAGTGGGAAAGGACACTAAGGCTCTaGGCTCTCATAAGGCTGCAGAGAAGCCAGGTGGCTGTCAGCATC | + |
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Preference number: 1 (lower is better) Translates to: HHVTHLRQWERTLRL*ALIRLQRSQVAVSI Trigger: GATGCTGACAGCCACCTGGCTTCTCTGCAGCCTTATGAGAGCTCAGAGCCTTAGTGTCCTTTCCCACTGGCGCAGATGAGTTACATGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR TCA 90 bp | CAGAGACTTCCCAGTAGCCCCTGCTTCGCTTTCGTCTTCAGGGAGTaGTGCAGACGGTACATTCCATCCTGTTGGCTTGGGATGGCTGAA | + |
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Preference number: 1 (lower is better) Translates to: QRLPSSPCFAFVFRE*CRRYIPSCWLGMAE Trigger: TTCAGCCATCCCAAGCCAACAGGATGGAATGTACCGTCTGCATCACTCCCTGAAGACGAAAGCGAAGCAGGGGCTACTGGGAAGTCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR TCA 90 bp | GCTCTCAGGCCCTCAACCCACTCCATGACCTTGAAGAGCCGCCTCTaGTGGTTCTCCCCCTCCTCCAAGTTATTTTTATCCAGCCTGACA | + |
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Preference number: 1 (lower is better) Translates to: ALRPSTHSMTLKSRL*WFSPSSKLFLSSLT Trigger: TGTCAGGCTGGATAAAAATAACTTGGAGGAGGGGGAGAACCATCAGAGGCGGCTCTTCAAGGTCATGGAGTGGGTTGAGGGCCTGAGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR TCA 90 bp | GTAGGCCACATAAAGGGAGTGGGGGAGCATTCTGGGACCCTCATATaGGAAGCTCTAAGAGGAAATGCTGGGGACAGAGAACAGGCCAGC | + |
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Preference number: 1 (lower is better) Translates to: VGHIKGVGEHSGTLI*EALRGNAGDREQAS Trigger: GCTGGCCTGTTCTCTGTCCCCAGCATTTCCTCTTAGAGCTTCTCATATGAGGGTCCCAGAATGCTCCCCCACTCCCTTTATGTGGCCTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR CCA 90 bp | GGCTCTGCCAGGCTTGGCTGGCACAGAGTGGATCTCCATGAATGCTaGATTTGTTGGGAGCTAGATGTATTAAGAAGCCAGGCCAAGAGC | + |
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Preference number: 1 (lower is better) Translates to: GSARLGWHRVDLHEC*ICWELDVLRSQAKS Trigger: GCTCTTGGCCTGGCTTCTTAATACATCTAGCTCCCAACAAATCCAGCATTCATGGAGATCCACTCTGTGCCAGCCAAGCCTGGCAGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR GCA 90 bp | GGGGGAGCATTCTGGGACCCTCATATGAGAAGCTCTAAGAGGAAATaGTGGGGACAGAGAACAGGCCAGCGTAGCATAAACACTGAGCAA | + |
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Preference number: 1 (lower is better) Translates to: GGAFWDPHMRSSKRK*WGQRTGQRSINTEQ Trigger: TTGCTCAGTGTTTATGCTACGCTGGCCTGTTCTCTGTCCCCAGCATTTCCTCTTAGAGCTTCTCATATGAGGGTCCCAGAATGCTCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR GCA 90 bp | ATTGGCTCTGCCAGGCTTGGCTGGCACAGAGTGGATCTCCATGAATaGTGGATTTGTTGGGAGCTAGATGTATTAAGAAGCCAGGCCAAG | + |
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Preference number: 1 (lower is better) Translates to: IGSARLGWHRVDLHE*WICWELDVLRSQAK Trigger: CTTGGCCTGGCTTCTTAATACATCTAGCTCCCAACAAATCCAGCATTCATGGAGATCCACTCTGTGCCAGCCAAGCCTGGCAGAGCCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR CCA 90 bp | CTGAGTGACCATGTGTTTGTTACCATTGGCTCTGCCAGGCTTGGCTaGCACAGAGTGGATCTCCATGAATGCTGGATTTGTTGGGAGCTA | + |
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Preference number: 1 (lower is better) Translates to: LSDHVFVTIGSARLG*HRVDLHECWICWEL Trigger: TAGCTCCCAACAAATCCAGCATTCATGGAGATCCACTCTGTGCCAGCCAAGCCTGGCAGAGCCAATGGTAACAAACACATGGTCACTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR CCA 90 bp | CTTGAAGTTAAAGCTTCAACCCAGACCCAAGGTCCATGTGTATACTaGGTCCACAGTACCTGGGGGCTCACAAGGCACCATGTAACTCAT | + |
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Preference number: 1 (lower is better) Translates to: LEVKASTQTQGPCVY*VHSTWGLTRHHVTH Trigger: ATGAGTTACATGGTGCCTTGTGAGCCCCCAGGTACTGTGGACCCAGTATACACATGGACCTTGGGTCTGGGTTGAAGCTTTAACTTCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR TCA 90 bp | ATTGTCACATGCCCATCTTATCTAGGTAGAGGATACACTGCCCTCTaGGTGACCATGTGTTTGTTACCATTGGCTCTGCCAGGCTTGGCT | + |
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Preference number: 1 (lower is better) Translates to: IVTCPSYLGRGYTAL*VTMCLLPLALPGLA Trigger: AGCCAAGCCTGGCAGAGCCAATGGTAACAAACACATGGTCACTCAGAGGGCAGTGTATCCTCTACCTAGATAAGATGGGCATGTGACAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR CCA 90 bp | GGAGCATTCTGGGACCCTCATATGAGAAGCTCTAAGAGGAAATGCTaGGGACAGAGAACAGGCCAGCGTAGCATAAACACTGAGCAAAAT | + |
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Preference number: 1 (lower is better) Translates to: GAFWDPHMRSSKRKC*GQRTGQRSINTEQN Trigger: ATTTTGCTCAGTGTTTATGCTACGCTGGCCTGTTCTCTGTCCCCAGCATTTCCTCTTAGAGCTTCTCATATGAGGGTCCCAGAATGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR CCA 90 bp | AGGCTTGGCTGGCACAGAGTGGATCTCCATGAATGCTGGATTTGTTaGGAGCTAGATGTATTAAGAAGCCAGGCCAAGAGCAGAGAACAA | + |
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Preference number: 1 (lower is better) Translates to: RLGWHRVDLHECWIC*ELDVLRSQAKSREQ Trigger: TTGTTCTCTGCTCTTGGCCTGGCTTCTTAATACATCTAGCTCCCAACAAATCCAGCATTCATGGAGATCCACTCTGTGCCAGCCAAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR CAA 90 bp | CGCCGGCCAGCTCAGCTGTCAGCATTCACTCCAAGGCCAGCACGCTaGCGTCTCCTCTGGCCAGGGCCTTCTGACCATTCTGCCAGAACC | + |
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Preference number: 2 (lower is better) Translates to: RRPAQLSAFTPRPAR*RLLWPGPSDHSART Trigger: GGTTCTGGCAGAATGGTCAGAAGGCCCTGGCCAGAGGAGACGCAAGCGTGCTGGCCTTGGAGTGAATGCTGACAGCTGAGCTGGCCGGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR-3UTR TCA 90 bp | CTTGCTTCCAGGCCCCCTCCTACAGCCTGCCTAGCCAGAGACACCTACCCAACTCGAGGCTCTGACGGGTaGGGAGAGGTGCCTTTGCGT | + |
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Preference number: 2 (lower is better) Translates to: LASRPPPTACLARDTYPTRGSDG*GEVPLR Trigger: ACGCAAAGGCACCTCTCCTCACCCGTCAGAGCCTCG...AGTTGGGTAGGTGTCTCTGGCTAGGCAGGCTGTAGGAGGGGGCCTGGAAGCAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR-3UTR CCA 90 bp | CCTTTGGCCCTGGCTCTCCTGTCTCCTCTCAAAGTCAGCCAGCAGGAATGGCAGCAGCCTGACAGCCCTTaGCTGTGGCAGCAGTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: PLALALLSPLKVSQQEWQQPDSP*LWQQSG Trigger: CCCAGACTGCTGCCACAGCCAAGGGCTGTCAGGCTG...CTGCCATTCCTGCTGGCTGACTTTGAGAGGAGACAGGAGAGCCAGGGCCAAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR CAA 90 bp | CAGGCAGCTCGTATGTCTGGTGCTGAATCCCAAGGGAATGACTCTTaGGGAGGTGCCACCATGGGGCCGCTGGTCCTCCAACCTGGGAAC | + |
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Preference number: 2 (lower is better) Translates to: QAARMSGAESQGNDS*GGATMGPLVLQPGN Trigger: GTTCCCAGGTTGGAGGACCAGCGGCCCCATGGTGGCACCTCCCAAAGAGTCATTCCCTTGGGATTCAGCACCAGACATACGAGCTGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR-3UTR TCA 90 bp | CTTGCTTCCAGGCCCCCTCCTACAGCCTGCCTAGCCAGAGACACCTACCCAACTTGTGTGAAATCTGGGTaGGCAGGCTCTCAGGCCCTC | + |
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Preference number: 2 (lower is better) Translates to: LASRPPPTACLARDTYPTCVKSG*AGSQAL Trigger: GAGGGCCTGAGAGCCTGCTCACCCAGATTTCACACA...AGTTGGGTAGGTGTCTCTGGCTAGGCAGGCTGTAGGAGGGGGCCTGGAAGCAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR-3UTR CCA 90 bp | CTTGCTTCCAGGCCCCCTCCTACAGCCTGCCTAGCCAGAGACACCTACCCAACTGGTCCATGTGTATACTaGGTCCACAGTACCTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: LASRPPPTACLARDTYPTGPCVY*VHSTWG Trigger: CCCCCAGGTACTGTGGACCCAGTATACACATGGACC...AGTTGGGTAGGTGTCTCTGGCTAGGCAGGCTGTAGGAGGGGGCCTGGAAGCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR-3UTR CCA 90 bp | CTTGCTTCCAGGCCCCCTCCTACAGCCTGCCTAGCCAGAGACACCTACCCAACTGGTTCCAACAAAGTCTaGGGATGGGGTTTGCGGGAG | + |
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Preference number: 2 (lower is better) Translates to: LASRPPPTACLARDTYPTGSNKV*GWGLRE Trigger: CTCCCGCAAACCCCATCCCCAGACTTTGTTGGAACC...AGTTGGGTAGGTGTCTCTGGCTAGGCAGGCTGTAGGAGGGGGCCTGGAAGCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR-3UTR CCA 90 bp | CCTTTGGCCCTGGCTCTCCTGTCTCCTCTCAAAGTCAGCCAGCAGGAATGGCAGCAGCCCTGGGGACCATaGTTCCAACAAAGTCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: PLALALLSPLKVSQQEWQQPWGP*FQQSLG Trigger: CCCCAGACTTTGTTGGAACCATGGTCCCCAGGGCTG...CTGCCATTCCTGCTGGCTGACTTTGAGAGGAGACAGGAGAGCCAGGGCCAAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR-3UTR TCA 90 bp | ACTCTGCAGCCTTCTGCCCTCCCCAGGGATTGTCACATGCCCATCTTATCTAGGGCCTCCAGGAGGAGGTaGCATGGAGCTGAAGTAGGC | + |
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Preference number: 2 (lower is better) Translates to: TLQPSALPRDCHMPILSRASRRR*HGAEVG Trigger: GCCTACTTCAGCTCCATGTCACCTCCTCCTGGAGGC...CCTAGATAAGATGGGCATGTGACAATCCCTGGGGAGGGCAGAAGGCTGCAGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR-3UTR CCA 90 bp | CTAGCCCATCCTCCACGTATGTTCAGAGCCTGCTTCTGTAGCTCCTGGGTAAACGACAGCCCTTGGCTGTaGCAGCAGTCTGGGCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: LAHPPRMFRACFCSSWVNDSPWL*QQSGLW Trigger: CCAGAGCCCAGACTGCTGCCACAGCCAAGGGCTGTC...GTTTACCCAGGAGCTACAGAAGCAGGCTCTGAACATACGTGGAGGATGGGCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR-3UTR TCA 90 bp | CTTGCTTCCAGGCCCCCTCCTACAGCCTGCCTAGCCAGAGACACCTACCCAACTTATTTTTATCCAGCCTaGCAGCCCTTGGCTGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: LASRPPPTACLARDTYPTYFYPA*QPLAVA Trigger: TGCCACAGCCAAGGGCTGTCAGGCTGGATAAAAATA...AGTTGGGTAGGTGTCTCTGGCTAGGCAGGCTGTAGGAGGGGGCCTGGAAGCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR-3UTR TCA 90 bp | CCTTTGGCCCTGGCTCTCCTGTCTCCTCTCAAAGTCAGCCAGCAGGAATGGCAGCCCACAGTGAAGCTGTaGGCTGTGACACTGAATCTC | + |
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Preference number: 2 (lower is better) Translates to: PLALALLSPLKVSQQEWQPTVKL*AVTLNL Trigger: GAGATTCAGTGTCACAGCTCACAGCTTCACTGTGGG...CTGCCATTCCTGCTGGCTGACTTTGAGAGGAGACAGGAGAGCCAGGGCCAAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR-3UTR GCA 90 bp | ACTCTGCAGCCTTCTGCCCTCCCCAGGGATTGTCACATGCCCATCTTATCTAGGGTGCTCAATGCTGGGTaGAGATGGGAGCACAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: TLQPSALPRDCHMPILSRVLNAG*RWEHRP Trigger: TGGCCTGTGCTCCCATCTGCACCCAGCATTGAGCAC...CCTAGATAAGATGGGCATGTGACAATCCCTGGGGAGGGCAGAAGGCTGCAGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR-3UTR CCA 90 bp | CTTGCTTCCAGGCCCCCTCCTACAGCCTGCCTAGCCAGAGACACCTACCCAACTTCTAAGAGGAAATGCTaGGGACAGAGAACAGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: LASRPPPTACLARDTYPTSKRKC*GQRTGQ Trigger: CTGGCCTGTTCTCTGTCCCCAGCATTTCCTCTTAGA...AGTTGGGTAGGTGTCTCTGGCTAGGCAGGCTGTAGGAGGGGGCCTGGAAGCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR-3UTR CCA 90 bp | CCTTTGGCCCTGGCTCTCCTGTCTCCTCTCAAAGTCAGCCAGCAGGAATGGCAGAGTGGGGGAGCATTCTaGGACCCTCATATGAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: PLALALLSPLKVSQQEWQSGGAF*DPHMRS Trigger: GCTTCTCATATGAGGGTCCCAGAATGCTCCCCCACT...CTGCCATTCCTGCTGGCTGACTTTGAGAGGAGACAGGAGAGCCAGGGCCAAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR-3UTR CCA 90 bp | CTTGCTTCCAGGCCCCCTCCTACAGCCTGCCTAGCCAGAGACACCTACCCAACTTTGGCTGGCACAGAGTaGATCTCCATGAATGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: LASRPPPTACLARDTYPTLAGTE*ISMNAG Trigger: TCCAGCATTCATGGAGATCCACTCTGTGCCAGCCAA...AGTTGGGTAGGTGTCTCTGGCTAGGCAGGCTGTAGGAGGGGGCCTGGAAGCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR-3UTR CCA 90 bp | ACTCTGCAGCCTTCTGCCCTCCCCAGGGATTGTCACATGCCCATCTTATCTAGGTGGCTCTGCCAGGCTTaGCTGGCACAGAGTGGATCT | + |
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Preference number: 2 (lower is better) Translates to: TLQPSALPRDCHMPILSRWLCQA*LAQSGS Trigger: AGATCCACTCTGTGCCAGCCAAGCCTGGCAGAGCCA...CCTAGATAAGATGGGCATGTGACAATCCCTGGGGAGGGCAGAAGGCTGCAGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR-3UTR TCA 90 bp | GTGACCATGTGTTTGTTACCATTGGCTCTGCCAGGCTTGGCTGGCACAGAGTGGTTCACTGTTGTGGGGTaGGCCACAGAGACTTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: VTMCLLPLALPGLAGTEWFTVVG*ATETSQ Trigger: CTGGGAAGTCTCTGTGGCTCACCCCACAACAGTGAA...CCACTCTGTGCCAGCCAAGCCTGGCAGAGCCAATGGTAACAAACACATGGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR-3UTR TCA 90 bp | CTTGCTTCCAGGCCCCCTCCTACAGCCTGCCTAGCCAGAGACACCTACCCAACTACACTGCCCTCTGAGTaGCCATGTGTTTGTTACCAT | + |
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Preference number: 2 (lower is better) Translates to: LASRPPPTACLARDTYPTTLPSE*PCVCYH Trigger: ATGGTAACAAACACATGGTCACTCAGAGGGCAGTGT...AGTTGGGTAGGTGTCTCTGGCTAGGCAGGCTGTAGGAGGGGGCCTGGAAGCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR-3UTR GCA 90 bp | CTAGCCCATCCTCCACGTATGTTCAGAGCCTGCTTCTGTAGCTCCTGGGTAAACGCTCTGGGAGCCGGATaGAAACCAGGCAGCTCGTAT | + |
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Preference number: 2 (lower is better) Translates to: LAHPPRMFRACFCSSWVNALGAG*KPGSSY Trigger: ATACGAGCTGCCTGGTTTGCATCCGGCTCCCAGAGC...GTTTACCCAGGAGCTACAGAAGCAGGCTCTGAACATACGTGGAGGATGGGCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR-3UTR CCA 90 bp | ACTCTGCAGCCTTCTGCCCTCCCCAGGGATTGTCACATGCCCATCTTATCTAGGTGCAGAGAAGCCAGGTaGCTGTCAGCATCAGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: TLQPSALPRDCHMPILSRCREAR*LSASVV Trigger: CACCACTGATGCTGACAGCCACCTGGCTTCTCTGCA...CCTAGATAAGATGGGCATGTGACAATCCCTGGGGAGGGCAGAAGGCTGCAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR-3UTR CCA 90 bp | AGTGAAGCTGTGAGCTGTGACACTGAATCTCTGGCTAGGAGGCTGCCAAACTACGCTGGTCCTCCAACCTaGGAACCCTGTGGGAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: SEAVSCDTESLARRLPNYAGPPT*EPCGKG Trigger: ACCCTTCCCACAGGGTTCCCAGGTTGGAGGACCAGC...GTAGTTTGGCAGCCTCCTAGCCAGAGATTCAGTGTCACAGCTCACAGCTTCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR-3UTR CCA 90 bp | GTGACCATGTGTTTGTTACCATTGGCTCTGCCAGGCTTGGCTGGCACAGAGTGGAAGGGAATGACTCTTTaGGAGGTGCCACCATGGGGC | + |
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Preference number: 2 (lower is better) Translates to: VTMCLLPLALPGLAGTEWKGMTL*EVPPWG Trigger: GCCCCATGGTGGCACCTCCCAAAGAGTCATTCCCTT...CCACTCTGTGCCAGCCAAGCCTGGCAGAGCCAATGGTAACAAACACATGGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| 3UTR-3UTR CCA 90 bp | CTTGCTTCCAGGCCCCCTCCTACAGCCTGCCTAGCCAGAGACACCTACCCAACTTTCACAAGCACTTTCTaGGTCACTCAGGTGACCTCT | + |
|
Preference number: 2 (lower is better) Translates to: LASRPPPTACLARDTYPTFTSTF*VTQVTS Trigger: AGAGGTCACCTGAGTGACCCAGAAAGTGCTTGTGAA...AGTTGGGTAGGTGTCTCTGGCTAGGCAGGCTGTAGGAGGGGGCCTGGAAGCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR-3UTR CCA 90 bp | ACTCTGCAGCCTTCTGCCCTCCCCAGGGATTGTCACATGCCCATCTTATCTAGGCACTGTGCTCAATGCTaGGTGCAGATGGGAGCACAG | + |
|
Preference number: 2 (lower is better) Translates to: TLQPSALPRDCHMPILSRHCAQC*VQMGAQ Trigger: CTGTGCTCCCATCTGCACCCAGCATTGAGCACAGTG...CCTAGATAAGATGGGCATGTGACAATCCCTGGGGAGGGCAGAAGGCTGCAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR-3UTR GCA 90 bp | GTGACCATGTGTTTGTTACCATTGGCTCTGCCAGGCTTGGCTGGCACAGAGTGGACGGGTGAGGAGAGGTaGCTTTGCGTAGATGCCATT | + |
|
Preference number: 2 (lower is better) Translates to: VTMCLLPLALPGLAGTEWTGEER*LCVDAI Trigger: AATGGCATCTACGCAAAGGCACCTCTCCTCACCCGT...CCACTCTGTGCCAGCCAAGCCTGGCAGAGCCAATGGTAACAAACACATGGTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR-3UTR CCA 90 bp | AGTCTGGTGGAAGTGTCCAGAACTAGACATCTCTATTGTTTGTCTGCAACACCCGCTGTGGCAGCAGTCTaGGCTCTGGGAGCCGGATGC | + |
|
Preference number: 2 (lower is better) Translates to: SLVEVSRTRHLYCLSATPAVAAV*ALGAGC Trigger: GCATCCGGCTCCCAGAGCCCAGACTGCTGCCACAGC...GGGTGTTGCAGACAAACAATAGAGATGTCTAGTTCTGGACACTTCCACCAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR-3UTR CCA 90 bp | CTAGCCCATCCTCCACGTATGTTCAGAGCCTGCTTCTGTAGCTCCTGGGTAAACGTCAGCCAGCAGGAATaGCAGTGGAACTCACCCCTA | + |
|
Preference number: 2 (lower is better) Translates to: LAHPPRMFRACFCSSWVNVSQQE*QWNSPL Trigger: TAGGGGTGAGTTCCACTGCCATTCCTGCTGGCTGAC...GTTTACCCAGGAGCTACAGAAGCAGGCTCTGAACATACGTGGAGGATGGGCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR-3UTR GCA 90 bp | GTGACCATGTGTTTGTTACCATTGGCTCTGCCAGGCTTGGCTGGCACAGAGTGGTGGGTTGATGTGATGTaGCCTGCACATGCCACATTC | + |
|
Preference number: 2 (lower is better) Translates to: VTMCLLPLALPGLAGTEWWVDVM*PAHATF Trigger: GAATGTGGCATGTGCAGGGCACATCACATCAACCCA...CCACTCTGTGCCAGCCAAGCCTGGCAGAGCCAATGGTAACAAACACATGGTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR-3UTR CCA 90 bp | CACTCAGGTGACCTCTGCCCTCTGTTCCACTTTTCTGAAATGACTCTTTTGCTCCAGCAGTCTGGGCTCTaGGAGCCGGATGCAAACCAG | + |
|
Preference number: 2 (lower is better) Translates to: HSGDLCPLFHFSEMTLLLQQSGL*EPDANQ Trigger: CTGGTTTGCATCCGGCTCCCAGAGCCCAGACTGCTG...GAGCAAAAGAGTCATTTCAGAAAAGTGGAACAGAGGGCAGAGGTCACCTGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR-3UTR CCA 90 bp | AGTGAAGCTGTGAGCTGTGACACTGAATCTCTGGCTAGGAGGCTGCCAAACTACCAGCTGTGTGAAATCTaGGTGAGCAGGCTCTCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: SEAVSCDTESLARRLPNYQLCEI*VSRLSG Trigger: GCCTGAGAGCCTGCTCACCCAGATTTCACACAGCTG...GTAGTTTGGCAGCCTCCTAGCCAGAGATTCAGTGTCACAGCTCACAGCTTCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR CAA 90 bp | GGGGGCGGTGTGTCTCACCTCTTCATGGTGCTGGCCATGGAATCCTaGAAGTTAAAGCTTCAACCCAGACCCAAGGTCCATGTGTATACT | + |
|
Preference number: 2 (lower is better) Translates to: GGGVSHLFMVLAMES*KLKLQPRPKVHVYT Trigger: AGTATACACATGGACCTTGGGTCTGGGTTGAAGCTTTAACTTCAAGGATTCCATGGCCAGCACCATGAAGAGGTGAGACACACCGCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR-3UTR TCA 90 bp | CTAGCCCATCCTCCACGTATGTTCAGAGCCTGCTTCTGTAGCTCCTGGGTAAACCTCAAAGGTATCCCATaGTCAGCATGGTACCAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: LAHPPRMFRACFCSSWVNLKGIP*SAWYQQ Trigger: CTGCTGGTACCATGCTGATCATGGGATACCTTTGAG...GTTTACCCAGGAGCTACAGAAGCAGGCTCTGAACATACGTGGAGGATGGGCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR-3UTR TCA 90 bp | GTCCTTTGGCCCTGGCTCTCCTGTCTCCTCTCAAAGTCAGCCAGCAGGAATGGCGACCTTTCAGATGGATaGGTTATTCAAGCACATGAG | + |
|
Preference number: 2 (lower is better) Translates to: VLWPWLSCLLSKSASRNGDLSDG*VIQAHE Trigger: CTCATGTGCTTGAATAACTCATCCATCTGAAAGGTC...GCCATTCCTGCTGGCTGACTTTGAGAGGAGACAGGAGAGCCAGGGCCAAAGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR-3UTR GCA 90 bp | CTAGCCCATCCTCCACGTATGTTCAGAGCCTGCTTCTGTAGCTCCTGGGTAAACAGCTCTAAGAGGAAATaGTGGGGACAGAGAACAGGC | + |
|
Preference number: 2 (lower is better) Translates to: LAHPPRMFRACFCSSWVNSSKRK*WGQRTG Trigger: GCCTGTTCTCTGTCCCCAGCATTTCCTCTTAGAGCT...GTTTACCCAGGAGCTACAGAAGCAGGCTCTGAACATACGTGGAGGATGGGCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR-3UTR TCA 90 bp | CACTCAGGTGACCTCTGCCCTCTGTTCCACTTTTCTGAAATGACTCTTTTGCTCGCAGAACCAGCTGTGTaGAATCTGGGTGAGCAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: HSGDLCPLFHFSEMTLLLAEPAV*NLGEQA Trigger: AGCCTGCTCACCCAGATTTCACACAGCTGGTTCTGC...GAGCAAAAGAGTCATTTCAGAAAAGTGGAACAGAGGGCAGAGGTCACCTGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR-3UTR CCA 90 bp | ACTCTGCAGCCTTCTGCCCTCCCCAGGGATTGTCACATGCCCATCTTATCTAGGGAGCTTACGTTCCGGTaGGGAATATACCTAATCAAG | + |
|
Preference number: 2 (lower is better) Translates to: TLQPSALPRDCHMPILSRELTFR*GIYLIK Trigger: CTTGATTAGGTATATTCCCCACCGGAACGTAAGCTC...CCTAGATAAGATGGGCATGTGACAATCCCTGGGGAGGGCAGAAGGCTGCAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR-3UTR TCA 90 bp | GTGACCATGTGTTTGTTACCATTGGCTCTGCCAGGCTTGGCTGGCACAGAGTGGGCCTTCTCACCTCCTTaGTCAATTTATGCAACAGAA | + |
|
Preference number: 2 (lower is better) Translates to: VTMCLLPLALPGLAGTEWAFSPP*SIYATE Trigger: TTCTGTTGCATAAATTGATCAAGGAGGTGAGAAGGC...CCACTCTGTGCCAGCCAAGCCTGGCAGAGCCAATGGTAACAAACACATGGTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR-3UTR CCA 90 bp | CTTGACCTATTCACAAGCACTTTCTGGGTCACTCAGGTGACCTCTGCCCTCTGTTACATTCCATCCTGTTaGCTTGGGATGGCTGAATCC | + |
|
Preference number: 2 (lower is better) Translates to: LDLFTSTFWVTQVTSALCYIPSC*LGMAES Trigger: GGATTCAGCCATCCCAAGCCAACAGGATGGAATGTA...ACAGAGGGCAGAGGTCACCTGAGTGACCCAGAAAGTGCTTGTGAATAGGTCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR-3UTR TCA 90 bp | GTGACCATGTGTTTGTTACCATTGGCTCTGCCAGGCTTGGCTGGCACAGAGTGGGTCTTTATCACTTCTTaGCCTATTCACAAGCACTTT | + |
|
Preference number: 2 (lower is better) Translates to: VTMCLLPLALPGLAGTEWVFITS*PIHKHF Trigger: AAAGTGCTTGTGAATAGGTCAAGAAGTGATAAAGAC...CCACTCTGTGCCAGCCAAGCCTGGCAGAGCCAATGGTAACAAACACATGGTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR-3UTR CCA 90 bp | CTAGCCCATCCTCCACGTATGTTCAGAGCCTGCTTCTGTAGCTCCTGGGTAAACACTAGAAGTCAGGTGTaGATTGTAAAAAGTGTTCCG | + |
|
Preference number: 2 (lower is better) Translates to: LAHPPRMFRACFCSSWVNTRSQV*IVKSVP Trigger: CGGAACACTTTTTACAATCCACACCTGACTTCTAGT...GTTTACCCAGGAGCTACAGAAGCAGGCTCTGAACATACGTGGAGGATGGGCTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR-3UTR TCA 90 bp | AGTGAAGCTGTGAGCTGTGACACTGAATCTCTGGCTAGGAGGCTGCCAAACTACTCTGTTCCACTTTTCTaGAATGACTCTTTTGCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: SEAVSCDTESLARRLPNYSVPLF*NDSFAP Trigger: TGGAGCAAAAGAGTCATTTCAGAAAAGTGGAACAGA...GTAGTTTGGCAGCCTCCTAGCCAGAGATTCAGTGTCACAGCTCACAGCTTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR-3UTR TCA 90 bp | AGTCTGGTGGAAGTGTCCAGAACTAGACATCTCTATTGTTTGTCTGCAACACCCGACTGTTCTGCAGTTTaGGTACCTGCAACATGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: SLVEVSRTRHLYCLSATPDCSAV*VPATWK Trigger: TTTCCATGTTGCAGGTACTCAAACTGCAGAACAGTC...GGGTGTTGCAGACAAACAATAGAGATGTCTAGTTCTGGACACTTCCACCAGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR-3UTR TCA 90 bp | TACGTTCCGGTGGGGAATATACCTAATCAAGTGGACATACAAGTAGTTATACATCACCCTAGAGTGGAATaGGACTACTGGGGTCACCAG | + |
|
Preference number: 2 (lower is better) Translates to: YVPVGNIPNQVDIQVVIHHPRVE*DYWGHQ Trigger: CTGGTGACCCCAGTAGTCTCATTCCACTCTAGGGTG...ATGTATAACTACTTGTATGTCCACTTGATTAGGTATATTCCCCACCGGAACGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR-3UTR CCA 90 bp | CACTCAGGTGACCTCTGCCCTCTGTTCCACTTTTCTGAAATGACTCTTTTGCTCTCTCTGTTGTTCCACTaGCCATTTATTCCCACTAGA | + |
|
Preference number: 2 (lower is better) Translates to: HSGDLCPLFHFSEMTLLLSLLFH*PFIPTR Trigger: TCTAGTGGGAATAAATGGCCAGTGGAACAACAGAGA...GAGCAAAAGAGTCATTTCAGAAAAGTGGAACAGAGGGCAGAGGTCACCTGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR-3UTR TCA 90 bp | TACGTTCCGGTGGGGAATATACCTAATCAAGTGGACATACAAGTAGTTATACATTCCACTTTTCTGAAATaGCTCTTTTGCTCCACGGCT | + |
|
Preference number: 2 (lower is better) Translates to: YVPVGNIPNQVDIQVVIHSTFLK*LFCSTA Trigger: AGCCGTGGAGCAAAAGAGTCATTTCAGAAAAGTGGA...ATGTATAACTACTTGTATGTCCACTTGATTAGGTATATTCCCCACCGGAACGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR-3UTR GCA 90 bp | TACGTTCCGGTGGGGAATATACCTAATCAAGTGGACATACAAGTAGTTATACATTCTCTATTGTTTGTCTaGAACACCCTAGAGTGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: YVPVGNIPNQVDIQVVIHSLLFV*NTLEWN Trigger: ATTCCACTCTAGGGTGTTGCAGACAAACAATAGAGA...ATGTATAACTACTTGTATGTCCACTTGATTAGGTATATTCCCCACCGGAACGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR CCA 72 bp | GGAATGACTCTTTGGGAGGTGCCACCATGGGGCCGCTaGTCCTCCAACCTGGGAACCCTGTGGGAAGGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: GMTLWEVPPWGR*SSNLGTLWEGL Trigger: CAACCCTTCCCACAGGGTTCCCAGGTTGGAGGACCAGCGGCCCCATGGTGGCACCTCCCAAAGAGTCATTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR CCA 72 bp | CAGCTGGGTGGGGGTAGGGTGGCCCTCTCAGTCTCCTaGGAGAACGAACCCAAGGCCAATCAGGATGGATGC | + |
|
Preference number: 3 (lower is better) Translates to: QLGGGRVALSVS*ENEPKANQDGC Trigger: GCATCCATCCTGATTGGCCTTGGGTTCGTTCTCCCAGGAGACTGAGAGGGCCACCCTACCCCCACCCAGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR CCA 72 bp | GCATTCACTCCAAGGCCAGCACGCTTGCGTCTCCTCTaGCCAGGGCCTTCTGACCATTCTGCCAGAACCCCC | + |
|
Preference number: 3 (lower is better) Translates to: AFTPRPARLRLL*PGPSDHSARTP Trigger: GGGGGTTCTGGCAGAATGGTCAGAAGGCCCTGGCCAGAGGAGACGCAAGCGTGCTGGCCTTGGAGTGAATGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR CCA 72 bp | CTGGGTAAACCTCCAGATCTCTGTAAGGGAGTCCCCTaGTCCTCCTCAGGGAGGGCTTGCTTCCAGGCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: LGKPPDLCKGVP*SSSGRACFQAP Trigger: GGGGGCCTGGAAGCAAGCCCTCCCTGAGGAGGACCAGGGGACTCCCTTACAGAGATCTGGAGGTTTACCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR CCA 72 bp | GCTCTCCTGTCTCCTCTCAAAGTCAGCCAGCAGGAATaGCAGTGGAACTCACCCCTAGCGGAGTCTGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: ALLSPLKVSQQE*QWNSPLAESAS Trigger: GCTGGCAGACTCCGCTAGGGGTGAGTTCCACTGCCATTCCTGCTGGCTGACTTTGAGAGGAGACAGGAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR CCA 72 bp | CTGACCATTCTGCCAGAACCCCCAGTCCTTTGGCCCTaGCTCTCCTGTCTCCTCTCAAAGTCAGCCAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LTILPEPPVLWP*LSCLLSKSASR Trigger: CCTGCTGGCTGACTTTGAGAGGAGACAGGAGAGCCAGGGCCAAAGGACTGGGGGTTCTGGCAGAATGGTCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR-3UTR CAA 90 bp | CCTTTGGCCCTGGCTCTCCTGTCTCCTCTCAAAGTCAGCCAGCAGGAATGGCAGCCCACAGTCTTGACTTaGCCAGGGATTAGCCAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: PLALALLSPLKVSQQEWQPTVLT*PGISQG Trigger: ACCCTGGCTAATCCCTGGCAAAGTCAAGACTGTGGG...CTGCCATTCCTGCTGGCTGACTTTGAGAGGAGACAGGAGAGCCAGGGCCAAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR TCA 72 bp | AGGCCTCTGAGCAGAACCAGCTGTGTGAAATCTGGGTaGGCAGGCTCTCAGGCCCTCAACCCACTCCATGAC | + |
|
Preference number: 3 (lower is better) Translates to: RPLSRTSCVKSG*AGSQALNPLHD Trigger: GTCATGGAGTGGGTTGAGGGCCTGAGAGCCTGCTCACCCAGATTTCACACAGCTGGTTCTGCTCAGAGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR GCA 72 bp | AATATCTGGGGACTTCAATCGCCTCCTCTCCCCACTTaGAGGAGCCTGCAGGAGCGTCCTTCTGTCCCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: NIWGLQSPPLPT*RSLQERPSVPV Trigger: CACAGGGACAGAAGGACGCTCCTGCAGGCTCCTGCAAGTGGGGAGAGGAGGCGATTGAAGTCCCCAGATATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR GCA 72 bp | GCAGGAATGGCAGTGGAACTCACCCCTAGCGGAGTCTaGCAGCCACAGCAGGAAACAAGAAGCCTTCTCACC | + |
|
Preference number: 3 (lower is better) Translates to: AGMAVELTPSGV*QPQQETRSLLT Trigger: GGTGAGAAGGCTTCTTGTTTCCTGCTGTGGCTGGCAGACTCCGCTAGGGGTGAGTTCCACTGCCATTCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR CCA 72 bp | GTATGTCTGGTGCTGAATCCCAAGGGAATGACTCTTTaGGAGGTGCCACCATGGGGCCGCTGGTCCTCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: VCLVLNPKGMTL*EVPPWGRWSSN Trigger: GTTGGAGGACCAGCGGCCCCATGGTGGCACCTCCCAAAGAGTCATTCCCTTGGGATTCAGCACCAGACATAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR GCA 72 bp | CCTAGCCAGAGACACCTACCCAACTCTGCAGCCTTCTaGCCTCCCCAGGGATTGTCACATGCCCATCTTATC | + |
|
Preference number: 3 (lower is better) Translates to: PSQRHLPNSAAF*PPQGLSHAHLI Trigger: GATAAGATGGGCATGTGACAATCCCTGGGGAGGGCAGAAGGCTGCAGAGTTGGGTAGGTGTCTCTGGCTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR TCA 72 bp | ACTCATCTGCGCCAGTGGGAAAGGACACTAAGGCTCTaGGCTCTCATAAGGCTGCAGAGAAGCCAGGTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: THLRQWERTLRL*ALIRLQRSQVA Trigger: AGCCACCTGGCTTCTCTGCAGCCTTATGAGAGCTCAGAGCCTTAGTGTCCTTTCCCACTGGCGCAGATGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR TCA 72 bp | GCACATGCCACATTCTCTCCAGTGGCTGTTCAGAACTaGTGGCACAGCCAGAGAGAAGCAAGGAAGCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: AHATFSPVAVQN*WHSQREARKLG Trigger: CCCCAGCTTCCTTGCTTCTCTCTGGCTGTGCCATCAGTTCTGAACAGCCACTGGAGAGAATGTGGCATGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR TCA 72 bp | ATGGGAGCACAGGCCAGCTCTGGCCCCTGGCCTCATTaGGCTTACGTTCCGGTGGGGAATATACCTAATCAA | + |
|
Preference number: 3 (lower is better) Translates to: MGAQASSGPWPH*AYVPVGNIPNQ Trigger: TTGATTAGGTATATTCCCCACCGGAACGTAAGCTCAATGAGGCCAGGGGCCAGAGCTGGCCTGTGCTCCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR GCA 72 bp | CTCTGCAGCCTTCTGCCCTCCCCAGGGATTGTCACATaGCCATCTTATCTAGGTAGAGGATACACTGCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LCSLLPSPGIVT*PSYLGRGYTAL Trigger: GAGGGCAGTGTATCCTCTACCTAGATAAGATGGGCATGTGACAATCCCTGGGGAGGGCAGAAGGCTGCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR CCA 72 bp | ACCCAAGGTCCATGTGTATACTGGGTCCACAGTACCTaGGGGCTCACAAGGCACCATGTAACTCATCTGCGC | + |
|
Preference number: 3 (lower is better) Translates to: TQGPCVYWVHST*GLTRHHVTHLR Trigger: GCGCAGATGAGTTACATGGTGCCTTGTGAGCCCCCAGGTACTGTGGACCCAGTATACACATGGACCTTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR-3UTR CAA 90 bp | CTTGCTTCCAGGCCCCCTCCTACAGCCTGCCTAGCCAGAGACACCTACCCAACTAGACTGTTCTGCAGTTaGAGTACCTGCAACATGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LASRPPPTACLARDTYPTRLFCS*STCNME Trigger: TTCCATGTTGCAGGTACTCAAACTGCAGAACAGTCT...AGTTGGGTAGGTGTCTCTGGCTAGGCAGGCTGTAGGAGGGGGCCTGGAAGCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR TCA 72 bp | CAAGCACATGAGTCTCAGAAGGCCTCCAGGAGGAGGTaGCATGGAGCTGAAGTAGGCCACATAAAGGGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: QAHESQKASRRR*HGAEVGHIKGV Trigger: CACTCCCTTTATGTGGCCTACTTCAGCTCCATGTCACCTCCTCCTGGAGGCCTTCTGAGACTCATGTGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR CCA 72 bp | CCTCCACGTATGTTCAGAGCCTGCTTCTGTAGCTCCTaGGTAAACCTCCAGATCTCTGTAAGGGAGTCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: PPRMFRACFCSS*VNLQISVRESP Trigger: AGGGGACTCCCTTACAGAGATCTGGAGGTTTACCCAGGAGCTACAGAAGCAGGCTCTGAACATACGTGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR TCA 72 bp | CCCTCAACCCACTCCATGACCTTGAAGAGCCGCCTCTaGTGGTTCTCCCCCTCCTCCAAGTTATTTTTATCC | + |
|
Preference number: 3 (lower is better) Translates to: PSTHSMTLKSRL*WFSPSSKLFLS Trigger: GGATAAAAATAACTTGGAGGAGGGGGAGAACCATCAGAGGCGGCTCTTCAAGGTCATGGAGTGGGTTGAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR TCA 72 bp | ATAAAGGGAGTGGGGGAGCATTCTGGGACCCTCATATaGGAAGCTCTAAGAGGAAATGCTGGGGACAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: IKGVGEHSGTLI*EALRGNAGDRE Trigger: TTCTCTGTCCCCAGCATTTCCTCTTAGAGCTTCTCATATGAGGGTCCCAGAATGCTCCCCCACTCCCTTTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR TCA 72 bp | ATGGGACCTTTCAGATGGATGAGTTATTCAAGCACATaGGTCTCAGAAGGCCTCCAGGAGGAGGTGACATGG | + |
|
Preference number: 3 (lower is better) Translates to: MGPFRWMSYSST*VSEGLQEEVTW Trigger: CCATGTCACCTCCTCCTGGAGGCCTTCTGAGACTCATGTGCTTGAATAACTCATCCATCTGAAAGGTCCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR GCA 72 bp | CAATCAGGATGGATGCTCAAAGGGTTCAGCCACTTCTaGCATGTCCCCATAGTGTCAAGAGACTGTTCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: QSGWMLKGFSHF*HVPIVSRDCSA Trigger: TGCAGAACAGTCTCTTGACACTATGGGGACATGGCAGAAGTGGCTGAACCCTTTGAGCATCCATCCTGATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR GCA 72 bp | TTCTGGGACCCTCATATGAGAAGCTCTAAGAGGAAATaGTGGGGACAGAGAACAGGCCAGCGTAGCATAAAC | + |
|
Preference number: 3 (lower is better) Translates to: FWDPHMRSSKRK*WGQRTGQRSIN Trigger: GTTTATGCTACGCTGGCCTGTTCTCTGTCCCCAGCATTTCCTCTTAGAGCTTCTCATATGAGGGTCCCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR TCA 72 bp | CTCCAGGCAGGTAAACAATGGGACCTTTCAGATGGATaGGTTATTCAAGCACATGAGTCTCAGAAGGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LQAGKQWDLSDG*VIQAHESQKAS Trigger: GGAGGCCTTCTGAGACTCATGTGCTTGAATAACTCATCCATCTGAAAGGTCCCATTGTTTACCTGCCTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR CCA 72 bp | TGGCACAGAGTGGATCTCCATGAATGCTGGATTTGTTaGGAGCTAGATGTATTAAGAAGCCAGGCCAAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: WHRVDLHECWIC*ELDVLRSQAKS Trigger: GCTCTTGGCCTGGCTTCTTAATACATCTAGCTCCCAACAAATCCAGCATTCATGGAGATCCACTCTGTGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR CCA 72 bp | AGGCTTGGCTGGCACAGAGTGGATCTCCATGAATGCTaGATTTGTTGGGAGCTAGATGTATTAAGAAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: RLGWHRVDLHEC*ICWELDVLRSQ Trigger: CTGGCTTCTTAATACATCTAGCTCCCAACAAATCCAGCATTCATGGAGATCCACTCTGTGCCAGCCAAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR GCA 72 bp | CTTCTGCCATGTCCCCATAGTGTCAAGAGACTGTTCTaGAGTTTGAGTACCTGCAACATGGAAATGTTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LLPCPHSVKRLF*SLSTCNMEMFP Trigger: GGGAAACATTTCCATGTTGCAGGTACTCAAACTGCAGAACAGTCTCTTGACACTATGGGGACATGGCAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR TCA 72 bp | CCAAAGAGGACAAAAATGTTTCCACACTTTGTCCGCTaGCAGGACAGCCCTAAAGGTTGGTTCATTCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: PKRTKMFPHFVR*QDSPKGWFILC Trigger: ACAGAGAATGAACCAACCTTTAGGGCTGTCCTGTCAGCGGACAAAGTGTGGAAACATTTTTGTCCTCTTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR CCA 72 bp | AGAACAGGCCAGCGTAGCATAAACACTGAGCAAAATTaGAGCGAGCAAGAAATAAGACTAGAAGTCAGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: RTGQRSINTEQN*SEQEIRLEVRC Trigger: ACACCTGACTTCTAGTCTTATTTCTTGCTCGCTCCAATTTTGCTCAGTGTTTATGCTACGCTGGCCTGTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR-3UTR CAA 90 bp | AGTCTGGTGGAAGTGTCCAGAACTAGACATCTCTATTGTTTGTCTGCAACACCCTTGGTTCATTCTCTGTaGTTCCACTGGCCATTTATT | + |
|
Preference number: 3 (lower is better) Translates to: SLVEVSRTRHLYCLSATPLVHSL*FHWPFI Trigger: AATAAATGGCCAGTGGAACAACAGAGAATGAACCAA...GGGTGTTGCAGACAAACAATAGAGATGTCTAGTTCTGGACACTTCCACCAGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR CCA 72 bp | CAGAGACTCCAGAAATACTTAGGACGTAAAGTCTGGTaGAAGTGTCCAGAACTAGACATCTCTATTGTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: QRLQKYLGRKVW*KCPELDISIVC Trigger: ACAAACAATAGAGATGTCTAGTTCTGGACACTTCCACCAGACTTTACGTCCTAAGTATTTCTGGAGTCTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR CCA 72 bp | GTTCAGAGACTCCAGAAATACTTAGGACGTAAAGTCTaGTGGAAGTGTCCAGAACTAGACATCTCTATTGTT | + |
|
Preference number: 3 (lower is better) Translates to: VQRLQKYLGRKV*WKCPELDISIV Trigger: AACAATAGAGATGTCTAGTTCTGGACACTTCCACCAGACTTTACGTCCTAAGTATTTCTGGAGTCTCTGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| CDS-3UTR CCA 90 bp | GTGACCATGTGTTTGTTACCATTGGCTCTGCCAGGCTTGGCTGGCACAGAGTGGCGCCGTCGGAGCCACTaGGCGCCCTGGGCCGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VTMCLLPLALPGLAGTEWRRRSH*APWAAS Trigger: TGAAGCGGCCCAGGGCGCCCAGTGGCTCCGACGGCG...CCACTCTGTGCCAGCCAAGCCTGGCAGAGCCAATGGTAACAAACACATGGTCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| CDS-3UTR CCA 90 bp | CTTGCTTCCAGGCCCCCTCCTACAGCCTGCCTAGCCAGAGACACCTACCCAACTTGCTCCTGGCAGCCCTaGCATCAAGGGCTGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LASRPPPTACLARDTYPTCSWQP*HQGLWV Trigger: CACCCACAGCCCTTGATGCCAGGGCTGCCAGGAGCA...AGTTGGGTAGGTGTCTCTGGCTAGGCAGGCTGTAGGAGGGGGCCTGGAAGCAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| CDS-3UTR GCA 90 bp | TACTGGGTCCACAGTACCTGGGGGCTCACAAGGCACCATGTAACTCATCTGCGCCAGGGTCGGCATGGCTaGTGGGTCCTTCCAGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: YWVHSTWGLTRHHVTHLRQGRHG*WVLPGP Trigger: GGGTCCTGGAAGGACCCAGCAGCCATGCCGACCCTG...GCGCAGATGAGTTACATGGTGCCTTGTGAGCCCCCAGGTACTGTGGACCCAGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| CDS-3UTR CCA 90 bp | TACTGGGTCCACAGTACCTGGGGGCTCACAAGGCACCATGTAACTCATCTGCGCGGTCGGCATGGCTGCTaGGTCCTTCCAGGACCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: YWVHSTWGLTRHHVTHLRGRHGC*VLPGPP Trigger: TGGGGGTCCTGGAAGGACCCAGCAGCCATGCCGACC...GCGCAGATGAGTTACATGGTGCCTTGTGAGCCCCCAGGTACTGTGGACCCAGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| CDS-3UTR CCA 90 bp | GTGACCATGTGTTTGTTACCATTGGCTCTGCCAGGCTTGGCTGGCACAGAGTGGCGGACAGGGTCGGCATaGCTGCTGGGTCCTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VTMCLLPLALPGLAGTEWRTGSA*LLGPSR Trigger: CCTGGAAGGACCCAGCAGCCATGCCGACCCTGTCCG...CCACTCTGTGCCAGCCAAGCCTGGCAGAGCCAATGGTAACAAACACATGGTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| CDS-3UTR CCA 90 bp | TGTGGCAGCAGTCTGGGCTCTGGGAGCCGGATGCAAACCAGGCAGCTCGTATGTGCACTCTTCCCAGGATaGCGAGCTGACTGTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CGSSLGSGSRMQTRQLVCALFPG*RADCSG Trigger: CCCTGAACAGTCAGCTCGCCATCCTGGGAAGAGTGC...ACATACGAGCTGCCTGGTTTGCATCCGGCTCCCAGAGCCCAGACTGCTGCCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| CDS-3UTR CCA 90 bp | TACTGGGTCCACAGTACCTGGGGGCTCACAAGGCACCATGTAACTCATCTGCGCGATGGGCTCTCTGGGTaGAAGTCACCCCTCGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YWVHSTWGLTRHHVTHLRDGLSG*KSPLGW Trigger: CCAGCCGAGGGGTGACTTCCACCCAGAGAGCCCATC...GCGCAGATGAGTTACATGGTGCCTTGTGAGCCCCCAGGTACTGTGGACCCAGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR CAA 72 bp | GCTCAGCTGTCAGCATTCACTCCAAGGCCAGCACGCTaGCGTCTCCTCTGGCCAGGGCCTTCTGACCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: AQLSAFTPRPAR*RLLWPGPSDHS Trigger: AGAATGGTCAGAAGGCCCTGGCCAGAGGAGACGCAAGCGTGCTGGCCTTGGAGTGAATGCTGACAGCTGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| CDS-3UTR TCA 90 bp | CCTTTGGCCCTGGCTCTCCTGTCTCCTCTCAAAGTCAGCCAGCAGGAATGGCAGCTGCTGCATAGCTCTTaGGGTGGGAGAGGAGGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLALALLSPLKVSQQEWQLLHSS*GGRGGE Trigger: TTCGCCTCCTCTCCCACCTCAAGAGCTATGCAGCAG...CTGCCATTCCTGCTGGCTGACTTTGAGAGGAGACAGGAGAGCCAGGGCCAAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| CDS-3UTR CCA 90 bp | CTAGCCCATCCTCCACGTATGTTCAGAGCCTGCTTCTGTAGCTCCTGGGTAAACGGGTGGAGGGGCAGCTaGCCTCTCAGGAAGATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LAHPPRMFRACFCSSWVNGWRGS*PLRKMG Trigger: GCCCATCTTCCTGAGAGGCCAGCTGCCCCTCCACCC...GTTTACCCAGGAGCTACAGAAGCAGGCTCTGAACATACGTGGAGGATGGGCTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| CDS-3UTR CCA 90 bp | ACTCTGCAGCCTTCTGCCCTCCCCAGGGATTGTCACATGCCCATCTTATCTAGGGGAAGATGGGCTCTCTaGGTGGAAGTCACCCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: TLQPSALPRDCHMPILSRGRWAL*VEVTPR Trigger: CCGAGGGGTGACTTCCACCCAGAGAGCCCATCTTCC...CCTAGATAAGATGGGCATGTGACAATCCCTGGGGAGGGCAGAAGGCTGCAGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR CAA 72 bp | CGTATGTCTGGTGCTGAATCCCAAGGGAATGACTCTTaGGGAGGTGCCACCATGGGGCCGCTGGTCCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RMSGAESQGNDS*GGATMGPLVLQ Trigger: TTGGAGGACCAGCGGCCCCATGGTGGCACCTCCCAAAGAGTCATTCCCTTGGGATTCAGCACCAGACATACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| CDS-3UTR TCA 90 bp | AGTGAAGCTGTGAGCTGTGACACTGAATCTCTGGCTAGGAGGCTGCCAAACTACACTGGTGGTCGTGGGTaGGGGCTCCATCTCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SEAVSCDTESLARRLPNYTGGRG*GLHLCC Trigger: GCAGCAGAGATGGAGCCCTCACCCACGACCACCAGT...GTAGTTTGGCAGCCTCCTAGCCAGAGATTCAGTGTCACAGCTCACAGCTTCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| CDS-3UTR GCA 90 bp | ACTCTGCAGCCTTCTGCCCTCCCCAGGGATTGTCACATGCCCATCTTATCTAGGGTGGGATTGGGACTATaGTCCTGGCAGCCCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TLQPSALPRDCHMPILSRVGLGL*SWQPWH Trigger: ATGCCAGGGCTGCCAGGAGCATAGTCCCAATCCCAC...CCTAGATAAGATGGGCATGTGACAATCCCTGGGGAGGGCAGAAGGCTGCAGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| CDS-3UTR CCA 90 bp | CCTTTGGCCCTGGCTCTCCTGTCTCCTCTCAAAGTCAGCCAGCAGGAATGGCAGTGTGGGGGAACATGGTaGGATTGGGACTATGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLALALLSPLKVSQQEWQCGGTW*DWDYAP Trigger: AGGAGCATAGTCCCAATCCCACCATGTTCCCCCACA...CTGCCATTCCTGCTGGCTGACTTTGAGAGGAGACAGGAGAGCCAGGGCCAAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| CDS-3UTR TCA 90 bp | CTTGACCTATTCACAAGCACTTTCTGGGTCACTCAGGTGACCTCTGCCCTCTGTCCCAGGATGGCGAGCTaGCTGTTCAGGGAAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LDLFTSTFWVTQVTSALCPRMAS*LFREGK Trigger: CTTGCCTTCCCTGAACAGTCAGCTCGCCATCCTGGG...ACAGAGGGCAGAGGTCACCTGAGTGACCCAGAAAGTGCTTGTGAATAGGTCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| CDS-3UTR TCA 90 bp | CTAGCCCATCCTCCACGTATGTTCAGAGCCTGCTTCTGTAGCTCCTGGGTAAACCAGAAAGGCTACTGTTaGTGCGGTCTCTGCGCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: LAHPPRMFRACFCSSWVNQKGYC*CGLCAV Trigger: AACGGCGCAGAGACCGCATCAACAGTAGCCTTTCTG...GTTTACCCAGGAGCTACAGAAGCAGGCTCTGAACATACGTGGAGGATGGGCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| CDS-3UTR CCA 90 bp | AGTCTGGTGGAAGTGTCCAGAACTAGACATCTCTATTGTTTGTCTGCAACACCCGAAAGGCCAGGGCACTaGTGGTCGTGGGTGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLVEVSRTRHLYCLSATPERPGH*WSWVRA Trigger: AGCCCTCACCCACGACCACCAGTGCCCTGGCCTTTC...GGGTGTTGCAGACAAACAATAGAGATGTCTAGTTCTGGACACTTCCACCAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| CDS-3UTR CCA 90 bp | CAAGAGACTGTTCTGCAGTTTGAGTACCTGCAACATGGAAATGTTTCCCACAGTTGGCATCAAGGGCTGTaGGTGGAGGGGCAGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QETVLQFEYLQHGNVSHSWHQGL*VEGQLA Trigger: GGCCAGCTGCCCCTCCACCCACAGCCCTTGATGCCA...ACTGTGGGAAACATTTCCATGTTGCAGGTACTCAAACTGCAGAACAGTCTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR CAA 72 bp | GTGACCATGTGTTTGTTACCATTGGCTCTGCCAGGCTaGGCTGGCACAGAGTGGATCTCCATGAATGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VTMCLLPLALPG*AGTEWISMNAG Trigger: TCCAGCATTCATGGAGATCCACTCTGTGCCAGCCAAGCCTGGCAGAGCCAATGGTAACAAACACATGGTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| CDS-3UTR TCA 90 bp | CTAGCCCATCCTCCACGTATGTTCAGAGCCTGCTTCTGTAGCTCCTGGGTAAACCTAAGATCGTTCTCTTaGCCCACATCGATGGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LAHPPRMFRACFCSSWVNLRSFS*PTSMGP Trigger: TGGACCCATCGATGTGGGTCAAGAGAACGATCTTAG...GTTTACCCAGGAGCTACAGAAGCAGGCTCTGAACATACGTGGAGGATGGGCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| CDS-3UTR CCA 90 bp | CACTCAGGTGACCTCTGCCCTCTGTTCCACTTTTCTGAAATGACTCTTTTGCTCCTCCAGGGGCTGTTGTaGGGGAACATGGTGGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: HSGDLCPLFHFSEMTLLLLQGLL*GNMVGL Trigger: CAATCCCACCATGTTCCCCCACAACAGCCCCTGGAG...GAGCAAAAGAGTCATTTCAGAAAAGTGGAACAGAGGGCAGAGGTCACCTGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| CDS-3UTR TCA 90 bp | AGTCTGGTGGAAGTGTCCAGAACTAGACATCTCTATTGTTTGTCTGCAACACCCCCTCCCAGTTGGCCCTaGAGGACATGGACTGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SLVEVSRTRHLYCLSATPPPSWP*RTWTGD Trigger: ATCTCCAGTCCATGTCCTTCAGGGCCAACTGGGAGG...GGGTGTTGCAGACAAACAATAGAGATGTCTAGTTCTGGACACTTCCACCAGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| CDS-3UTR CCA 90 bp | AGTCTGGTGGAAGTGTCCAGAACTAGACATCTCTATTGTTTGTCTGCAACACCCTTGGGACTATGCTCCTaGCAGCCCTGGCATCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLVEVSRTRHLYCLSATPLGLCS*QPWHQG Trigger: CCCTTGATGCCAGGGCTGCCAGGAGCATAGTCCCAA...GGGTGTTGCAGACAAACAATAGAGATGTCTAGTTCTGGACACTTCCACCAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| CDS-3UTR CCA 90 bp | AGTGAAGCTGTGAGCTGTGACACTGAATCTCTGGCTAGGAGGCTGCCAAACTACGTTTCTCAAAGGCAGTaGGGACCAATCGTCGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: SEAVSCDTESLARRLPNYVSQRQ*GPIVAI Trigger: AATTGCGACGATTGGTCCCCACTGCCTTTGAGAAAC...GTAGTTTGGCAGCCTCCTAGCCAGAGATTCAGTGTCACAGCTCACAGCTTCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| CDS-3UTR CCA 90 bp | CACTCAGGTGACCTCTGCCCTCTGTTCCACTTTTCTGAAATGACTCTTTTGCTCCAGCTTTCTCCAGCTTaGAGGAGCCCTGTTTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: HSGDLCPLFHFSEMTLLLQLSPA*RSPVSQ Trigger: TTGAGAAACAGGGCTCCTCCAAGCTGGAGAAAGCTG...GAGCAAAAGAGTCATTTCAGAAAAGTGGAACAGAGGGCAGAGGTCACCTGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| CDS-3UTR TCA 90 bp | AGTGAAGCTGTGAGCTGTGACACTGAATCTCTGGCTAGGAGGCTGCCAAACTACAATTTCAGTGATTTCTaGGACCCAAGAGTGGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SEAVSCDTESLARRLPNYNFSDF*DPRVVE Trigger: TTCTACCACTCTTGGGTCTCAGAAATCACTGAAATT...GTAGTTTGGCAGCCTCCTAGCCAGAGATTCAGTGTCACAGCTCACAGCTTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| 3UTR CAA 72 bp | CCATGTCCCCATAGTGTCAAGAGACTGTTCTGCAGTTaGAGTACCTGCAACATGGAAATGTTTCCCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PCPHSVKRLFCS*STCNMEMFPTV Trigger: CACTGTGGGAAACATTTCCATGTTGCAGGTACTCAAACTGCAGAACAGTCTCTTGACACTATGGGGACATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| CDS-3UTR GCA 90 bp | TACGTTCCGGTGGGGAATATACCTAATCAAGTGGACATACAAGTAGTTATACATGGGCTCCATCTCTGCTaGATAGCTCTTGAGGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: YVPVGNIPNQVDIQVVIHGLHLC*IALEVG Trigger: TCCCACCTCAAGAGCTATGCAGCAGAGATGGAGCCC...ATGTATAACTACTTGTATGTCCACTTGATTAGGTATATTCCCCACCGGAACGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| CDS-3UTR TCA 90 bp | CAAGAGACTGTTCTGCAGTTTGAGTACCTGCAACATGGAAATGTTTCCCACAGTAAGCCCCAATTTCAGTaGTTTCTGAGACCCAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QETVLQFEYLQHGNVSHSKPQFQ*FLRPKS Trigger: ACTCTTGGGTCTCAGAAATCACTGAAATTGGGGCTT...ACTGTGGGAAACATTTCCATGTTGCAGGTACTCAAACTGCAGAACAGTCTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| CDS CCA 90 bp | GCTCCTGGCAGCCCTGGCATCAAGGGCTGTGGGTGGAGGGGCAGCTaGCCTCTCAGGAAGATGGGCTCTCTGGGTGGAAGTCACCCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: APGSPGIKGCGWRGS*PLRKMGSLGGSHPS Trigger: CGAGGGGTGACTTCCACCCAGAGAGCCCATCTTCCTGAGAGGCCAGCTGCCCCTCCACCCACAGCCCTTGATGCCAGGGCTGCCAGGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| CDS TCA 90 bp | GGACCAGGGCCACACGGGAAAGGCCAGGGCACTGGTGGTCGTGGGTaGGGGCTCCATCTCTGCTGCATAGCTCTTGAGGTGGGAGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GPGPHGKGQGTGGRG*GLHLCCIALEVGEE Trigger: CTCCTCTCCCACCTCAAGAGCTATGCAGCAGAGATGGAGCCCTCACCCACGACCACCAGTGCCCTGGCCTTTCCCGTGTGGCCCTGGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| CDS GCA 90 bp | TCTCTGCGCCGTTTCTCTATGATCCCTCTGCGCTTCTTCCGGGCTTaGATCTGCGAAGGGCTGGGGGTAGTCAGCGGCCTGGCCATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SLRRFSMIPLRFFRA*ICEGLGVVSGLAIW Trigger: CCAGATGGCCAGGCCGCTGACTACCCCCAGCCCTTCGCAGATGCAAGCCCGGAAGAAGCGCAGAGGGATCATAGAGAAACGGCGCAGAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| CDS GCA 90 bp | CGCCGTTTCTCTATGATCCCTCTGCGCTTCTTCCGGGCTTGCATCTaGGAAGGGCTGGGGGTAGTCAGCGGCCTGGCCATCTGGCTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RRFSMIPLRFFRACI*EGLGVVSGLAIWLR Trigger: TCTTAGCCAGATGGCCAGGCCGCTGACTACCCCCAGCCCTTCGCAGATGCAAGCCCGGAAGAAGCGCAGAGGGATCATAGAGAAACGGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| CDS CCA 90 bp | CACTCTTCCCAGGATGGCGAGCTGACTGTTCAGGGAAGGCAAGCCTaGACAGCTATGCAGGAAGGACCAGGGCCACACGGGAAAGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HSSQDGELTVQGRQA*TAMQEGPGPHGKGQ Trigger: CTGGCCTTTCCCGTGTGGCCCTGGTCCTTCCTGCATAGCTGTCCAGGCTTGCCTTCCCTGAACAGTCAGCTCGCCATCCTGGGAAGAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| CDS CCA 90 bp | GAGAAGAGATGCTGGGGAGGACAGGGCCGGGCACTCTTCCCAGGATaGCGAGCTGACTGTTCAGGGAAGGCAAGCCTGGACAGCTATGCA | + |
|
Preference number: 5 (lower is better) Translates to: EKRCWGGQGRALFPG*RADCSGKASLDSYA Trigger: TGCATAGCTGTCCAGGCTTGCCTTCCCTGAACAGTCAGCTCGCCATCCTGGGAAGAGTGCCCGGCCCTGTCCTCCCCAGCATCTCTTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| CDS-3UTR CAA 90 bp | TACTGGGTCCACAGTACCTGGGGGCTCACAAGGCACCATGTAACTCATCTGCGCGCGCTTCTTCCGGGCTaGCATCTGCGAAGGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: YWVHSTWGLTRHHVTHLRALLPG*HLRRAG Trigger: CCCAGCCCTTCGCAGATGCAAGCCCGGAAGAAGCGC...GCGCAGATGAGTTACATGGTGCCTTGTGAGCCCCCAGGTACTGTGGACCCAGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
||
| CDS-3UTR CAA 90 bp | CTAGCCCATCCTCCACGTATGTTCAGAGCCTGCTTCTGTAGCTCCTGGGTAAACCCGCAGGCCTCCCAGTaGGCCCTGAAGGACATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LAHPPRMFRACFCSSWVNPQASQ*ALKDMD Trigger: GTCCATGTCCTTCAGGGCCAACTGGGAGGCCTGCGG...GTTTACCCAGGAGCTACAGAAGCAGGCTCTGAACATACGTGGAGGATGGGCTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| CDS CCA 90 bp | ATTGTCATCAGATTTCCCAGCTCCAGGGGCTGTTGTGGGGGAACATaGTGGGATTGGGACTATGCTCCTGGCAGCCCTGGCATCAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: IVIRFPSSRGCCGGT*WDWDYAPGSPGIKG Trigger: GCCCTTGATGCCAGGGCTGCCAGGAGCATAGTCCCAATCCCACCATGTTCCCCCACAACAGCCCCTGGAGCTGGGAAATCTGATGACAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| CDS CCA 90 bp | AACCAGACACATTGTCATCAGATTTCCCAGCTCCAGGGGCTGTTGTaGGGGAACATGGTGGGATTGGGACTATGCTCCTGGCAGCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: NQTHCHQISQLQGLL*GNMVGLGLCSWQPW Trigger: CCAGGGCTGCCAGGAGCATAGTCCCAATCCCACCATGTTCCCCCACAACAGCCCCTGGAGCTGGGAAATCTGATGACAATGTGTCTGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| CDS-3UTR CAA 90 bp | TACTGGGTCCACAGTACCTGGGGGCTCACAAGGCACCATGTAACTCATCTGCGCTCAGAAAGGCTACTGTaGATGCGGTCTCTGCGCCGT | + |
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Preference number: 5 (lower is better) Translates to: YWVHSTWGLTRHHVTHLRSERLL*MRSLRR Trigger: ACGGCGCAGAGACCGCATCAACAGTAGCCTTTCTGA...GCGCAGATGAGTTACATGGTGCCTTGTGAGCCCCCAGGTACTGTGGACCCAGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| CDS CCA 72 bp | AGGACCAGGGCCACACGGGAAAGGCCAGGGCACTGGTaGTCGTGGGTGAGGGCTCCATCTCTGCTGCATAGC | + |
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Preference number: 6 (lower is better) Translates to: RTRATRERPGHW*SWVRAPSLLHS Trigger: GCTATGCAGCAGAGATGGAGCCCTCACCCACGACCACCAGTGCCCTGGCCTTTCCCGTGTGGCCCTGGTCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| CDS CCA 72 bp | GGAAGGACCAGGGCCACACGGGAAAGGCCAGGGCACTaGTGGTCGTGGGTGAGGGCTCCATCTCTGCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: GRTRATRERPGH*WSWVRAPSLLH Trigger: ATGCAGCAGAGATGGAGCCCTCACCCACGACCACCAGTGCCCTGGCCTTTCCCGTGTGGCCCTGGTCCTTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| CDS CCA 72 bp | TGCTGGGGAGGACAGGGCCGGGCACTCTTCCCAGGATaGCGAGCTGACTGTTCAGGGAAGGCAAGCCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: CWGGQGRALFPG*RADCSGKASLD Trigger: GTCCAGGCTTGCCTTCCCTGAACAGTCAGCTCGCCATCCTGGGAAGAGTGCCCGGCCCTGTCCTCCCCAGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| CDS CCA 72 bp | GGGCAGCTGGCCTCTCAGGAAGATGGGCTCTCTGGGTaGAAGTCACCCCTCGGCTGGGCAACAAATTCCGCC | + |
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Preference number: 6 (lower is better) Translates to: GQLASQEDGLSG*KSPLGWATNSA Trigger: GGCGGAATTTGTTGCCCAGCCGAGGGGTGACTTCCACCCAGAGAGCCCATCTTCCTGAGAGGCCAGCTGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| CDS CCA 72 bp | AGCCCTGGCATCAAGGGCTGTGGGTGGAGGGGCAGCTaGCCTCTCAGGAAGATGGGCTCTCTGGGTGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: SPGIKGCGWRGS*PLRKMGSLGGS Trigger: ACTTCCACCCAGAGAGCCCATCTTCCTGAGAGGCCAGCTGCCCCTCCACCCACAGCCCTTGATGCCAGGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| CDS CAA 90 bp | GTCTCTGCGCCGTTTCTCTATGATCCCTCTGCGCTTCTTCCGGGCTaGCATCTGCGAAGGGCTGGGGGTAGTCAGCGGCCTGGCCATCTG | + |
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Preference number: 6 (lower is better) Translates to: VSAPFLYDPSALLPG*HLRRAGGSQRPGHL Trigger: CAGATGGCCAGGCCGCTGACTACCCCCAGCCCTTCGCAGATGCAAGCCCGGAAGAAGCGCAGAGGGATCATAGAGAAACGGCGCAGAGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| CDS TCA 72 bp | TCGTGGGTGAGGGCTCCATCTCTGCTGCATAGCTCTTaGGGTGGGAGAGGAGGCGAATCCGGACAGGGTCGG | + |
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Preference number: 6 (lower is better) Translates to: SWVRAPSLLHSS*GGRGGESGQGR Trigger: CCGACCCTGTCCGGATTCGCCTCCTCTCCCACCTCAAGAGCTATGCAGCAGAGATGGAGCCCTCACCCACGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| CDS CCA 72 bp | CAGGATGGCGAGCTGACTGTTCAGGGAAGGCAAGCCTaGACAGCTATGCAGGAAGGACCAGGGCCACACGGG | + |
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Preference number: 6 (lower is better) Translates to: QDGELTVQGRQA*TAMQEGPGPHG Trigger: CCCGTGTGGCCCTGGTCCTTCCTGCATAGCTGTCCAGGCTTGCCTTCCCTGAACAGTCAGCTCGCCATCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| CDS CAA 72 bp | CAGCTCCAGGGGCTGTTGTGGGGGAACATGGTGGGATaGGGACTATGCTCCTGGCAGCCCTGGCATCAAGGG | + |
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Preference number: 6 (lower is better) Translates to: QLQGLLWGNMVG*GLCSWQPWHQG Trigger: CCCTTGATGCCAGGGCTGCCAGGAGCATAGTCCCAATCCCACCATGTTCCCCCACAACAGCCCCTGGAGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| CDS CCA 72 bp | TTTCCCAGCTCCAGGGGCTGTTGTGGGGGAACATGGTaGGATTGGGACTATGCTCCTGGCAGCCCTGGCATC | + |
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Preference number: 6 (lower is better) Translates to: FPSSRGCCGGTW*DWDYAPGSPGI Trigger: GATGCCAGGGCTGCCAGGAGCATAGTCCCAATCCCACCATGTTCCCCCACAACAGCCCCTGGAGCTGGGAAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| CDS CCA 72 bp | AGATTTCCCAGCTCCAGGGGCTGTTGTGGGGGAACATaGTGGGATTGGGACTATGCTCCTGGCAGCCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: RFPSSRGCCGGT*WDWDYAPGSPG Trigger: GCCAGGGCTGCCAGGAGCATAGTCCCAATCCCACCATGTTCCCCCACAACAGCCCCTGGAGCTGGGAAATCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| CDS CAA 72 bp | CCGTTTCTCTATGATCCCTCTGCGCTTCTTCCGGGCTaGCATCTGCGAAGGGCTGGGGGTAGTCAGCGGCCT | + |
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Preference number: 6 (lower is better) Translates to: PFLYDPSALLPG*HLRRAGGSQRP Trigger: AGGCCGCTGACTACCCCCAGCCCTTCGCAGATGCAAGCCCGGAAGAAGCGCAGAGGGATCATAGAGAAACGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| CDS TCA 72 bp | GTCAGCGGCCTGGCCATCTGGCTAAGATCGTTCTCTTaGCCCACATCGATGGGTCCATCAGACTCGCCGTCG | + |
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Preference number: 6 (lower is better) Translates to: VSGLAIWLRSFS*PTSMGPSDSPS Trigger: CGACGGCGAGTCTGATGGACCCATCGATGTGGGTCAAGAGAACGATCTTAGCCAGATGGCCAGGCCGCTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| CDS CAA 72 bp | AGTCAGCGGCCTGGCCATCTGGCTAAGATCGTTCTCTaGACCCACATCGATGGGTCCATCAGACTCGCCGTC | + |
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Preference number: 6 (lower is better) Translates to: SQRPGHLAKIVL*THIDGSIRLAV Trigger: GACGGCGAGTCTGATGGACCCATCGATGTGGGTCAAGAGAACGATCTTAGCCAGATGGCCAGGCCGCTGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| CDS TCA 72 bp | GTAGAACACTGCTCCCGCAGGCCTCCCAGTTGGCCCTaGAGGACATGGACTGGAGATAGAACCAGACACATT | + |
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Preference number: 6 (lower is better) Translates to: VEHCSRRPPSWP*RTWTGDRTRHI Trigger: AATGTGTCTGGTTCTATCTCCAGTCCATGTCCTTCAGGGCCAACTGGGAGGCCTGCGGGAGCAGTGTTCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| CDS CCA 72 bp | CATTGTCATCAGATTTCCCAGCTCCAGGGGCTGTTGTaGGGGAACATGGTGGGATTGGGACTATGCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: HCHQISQLQGLL*GNMVGLGLCSW Trigger: CCAGGAGCATAGTCCCAATCCCACCATGTTCCCCCACAACAGCCCCTGGAGCTGGGAAATCTGATGACAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| CDS CAA 90 bp | TCAAAGGCAGTGGGGACCAATCGTCGCAATTCAGAAAGGCTACTGTaGATGCGGTCTCTGCGCCGTTTCTCTATGATCCCTCTGCGCTTC | + |
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Preference number: 6 (lower is better) Translates to: SKAVGTNRRNSERLL*MRSLRRFSMIPLRF Trigger: GAAGCGCAGAGGGATCATAGAGAAACGGCGCAGAGACCGCATCAACAGTAGCCTTTCTGAATTGCGACGATTGGTCCCCACTGCCTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| CDS CAA 72 bp | GTGGGGACCAATCGTCGCAATTCAGAAAGGCTACTGTaGATGCGGTCTCTGCGCCGTTTCTCTATGATCCCT | + |
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Preference number: 6 (lower is better) Translates to: VGTNRRNSERLL*MRSLRRFSMIP Trigger: AGGGATCATAGAGAAACGGCGCAGAGACCGCATCAACAGTAGCCTTTCTGAATTGCGACGATTGGTCCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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| CDS CAA 72 bp | CCTGAAGGACATGGACTGGAGATAGAACCAGACACATaGTCATCAGATTTCCCAGCTCCAGGGGCTGTTGTG | + |
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Preference number: 6 (lower is better) Translates to: PEGHGLEIEPDT*SSDFPAPGAVV Trigger: CACAACAGCCCCTGGAGCTGGGAAATCTGATGACAATGTGTCTGGTTCTATCTCCAGTCCATGTCCTTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040821.5 |
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