Pregenerated sensors for HEY2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019789Ensembl transcript IDs: ENSMUST00000019924.9
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACCACCGGATGGTGACACTGGTGTGTTTTCCAAGAAAGTTTAAATaGACGTTGGTGTGCTGCTTTCAAGTTGCTGATGTCACTTGCCAA | + |
|
Preference number: 1 (lower is better) Translates to: HHRMVTLVCFPRKFK*TLVCCFQVADVTCQ Trigger: TTGGCAAGTGACATCAGCAACTTGAAAGCAGCACACCAACGTCCATTTAAACTTTCTTGGAAAACACACCAGTGTCACCATCCGGTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| 3UTR GCA 90 bp | GTGACACTGGTGTGTTTTCCAAGAAAGTTTAAATGGACGTTGGTGTaGTGCTTTCAAGTTGCTGATGTCACTTGCCAAGCTGCCTTAAAC | + |
|
Preference number: 1 (lower is better) Translates to: VTLVCFPRKFKWTLV*CFQVADVTCQAALN Trigger: GTTTAAGGCAGCTTGGCAAGTGACATCAGCAACTTGAAAGCAGCACACCAACGTCCATTTAAACTTTCTTGGAAAACACACCAGTGTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| 3UTR TCA 90 bp | CTCAAATCGCTTTATTGCTGCTGTGTGGAACTGTACATATCTGTATaGCTACCTTCAGGATGCAGAGGTTTGAAGCTGATTCCGAAATGG | + |
|
Preference number: 1 (lower is better) Translates to: LKSLYCCCVELYISV*LPSGCRGLKLIPKW Trigger: CCATTTCGGAATCAGCTTCAAACCTCTGCATCCTGAAGGTAGTCATACAGATATGTACAGTTCCACACAGCAGCAATAAAGCGATTTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| 3UTR GCA 90 bp | ACACTGGTGTGTTTTCCAAGAAAGTTTAAATGGACGTTGGTGTGCTaGTTTCAAGTTGCTGATGTCACTTGCCAAGCTGCCTTAAACAAA | + |
|
Preference number: 1 (lower is better) Translates to: TLVCFPRKFKWTLVC*FQVADVTCQAALNK Trigger: TTTGTTTAAGGCAGCTTGGCAAGTGACATCAGCAACTTGAAAGCAGCACACCAACGTCCATTTAAACTTTCTTGGAAAACACACCAGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| 3UTR CCA 90 bp | CATTTGTGTGAAGTCTGCTTCTCAAATCGCTTTATTGCTGCTGTGTaGAACTGTACATATCTGTATGACTACCTTCAGGATGCAGAGGTT | + |
|
Preference number: 1 (lower is better) Translates to: HLCEVCFSNRFIAAV*NCTYLYDYLQDAEV Trigger: AACCTCTGCATCCTGAAGGTAGTCATACAGATATGTACAGTTCCACACAGCAGCAATAAAGCGATTTGAGAAGCAGACTTCACACAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| 3UTR CCA 90 bp | TACATAAAGAAGCACTGTGTTTTAAACCAGGGTTCACTAGAGGTATaGAAGCTTGAAGGCAGAGCAGAAATGTTTGTTAATGGAGGCTCT | + |
|
Preference number: 1 (lower is better) Translates to: YIKKHCVLNQGSLEV*KLEGRAEMFVNGGS Trigger: AGAGCCTCCATTAACAAACATTTCTGCTCTGCCTTCAAGCTTCCATACCTCTAGTGAACCCTGGTTTAAAACACAGTGCTTCTTTATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| 3UTR TCA 90 bp | CATTGCCTGCTTCTTCTCTTTCTCAACCTAACAGCTATATCCTTCTaGTCTTGTGCTACGTTACATTCCTTAGTTCAGGCACTTAGAAAA | + |
|
Preference number: 1 (lower is better) Translates to: HCLLLLFLNLTAISF*SCATLHSLVQALRK Trigger: TTTTCTAAGTGCCTGAACTAAGGAATGTAACGTAGCACAAGATCAGAAGGATATAGCTGTTAGGTTGAGAAAGAGAAGAAGCAGGCAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| 3UTR CAA 90 bp | CGGATGGTGACACTGGTGTGTTTTCCAAGAAAGTTTAAATGGACGTaGGTGTGCTGCTTTCAAGTTGCTGATGTCACTTGCCAAGCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: RMVTLVCFPRKFKWT*VCCFQVADVTCQAA Trigger: GGCAGCTTGGCAAGTGACATCAGCAACTTGAAAGCAGCACACCAACGTCCATTTAAACTTTCTTGGAAAACACACCAGTGTCACCATCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| 3UTR CAA 90 bp | AAACCCGATGGTTTCCAAAGGGCACTGTATCTGCAGCCTGACACATaGCCTGCTTCTTCTCTTTCTCAACCTAACAGCTATATCCTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: KPDGFQRALYLQPDT*PASSLSQPNSYILL Trigger: CAGAAGGATATAGCTGTTAGGTTGAGAAAGAGAAGAAGCAGGCAATGTGTCAGGCTGCAGATACAGTGCCCTTTGGAAACCATCGGGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| 3UTR-3UTR GCA 90 bp | CTCAGTTATGGCGTTTTCCTTTTCCAAGTCAGGAGTATTAATGCACCACCGGATGTTGCTGATGTCACTTaGCAAGCTGCCTTAAACAAA | + |
|
Preference number: 2 (lower is better) Translates to: LSYGVFLFQVRSINAPPDVADVT*QAALNK Trigger: TTTGTTTAAGGCAGCTTGGCAAGTGACATCAGCAAC...ATCCGGTGGTGCATTAATACTCCTGACTTGGAAAAGGAAAACGCCATAACTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| 3UTR-3UTR GCA 90 bp | CTCTGGTGGAATTGCTTATTTCACTGCATAGCTAAATGTCATTGCTTGGCAAGTTGCAGCCTGACACATTaGCTGCTTCTTCTCTTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: LWWNCLFHCIAKCHCLASCSLTH*LLLLFL Trigger: GAGAAAGAGAAGAAGCAGGCAATGTGTCAGGCTGCA...ACTTGCCAAGCAATGACATTTAGCTATGCAGTGAAATAAGCAATTCCACCAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| 3UTR-3UTR CCA 90 bp | TCAGGAGTATTAATGCACCACCGGATGGTGACACTGGTGTGTTTTCCAAGAAAGAAGCTGATTCCGAAATaGACGACATCAGTTACTATT | + |
|
Preference number: 2 (lower is better) Translates to: SGVLMHHRMVTLVCFPRKKLIPK*TTSVTI Trigger: AATAGTAACTGATGTCGTCCATTTCGGAATCAGCTT...CTTTCTTGGAAAACACACCAGTGTCACCATCCGGTGGTGCATTAATACTCCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| 3UTR CAA 90 bp | TACTACATTTCCATTTGTGTGAAGTCTGCTTCTCAAATCGCTTTATaGCTGCTGTGTGGAACTGTACATATCTGTATGACTACCTTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: YYISICVKSASQIAL*LLCGTVHICMTTFR Trigger: CCTGAAGGTAGTCATACAGATATGTACAGTTCCACACAGCAGCAATAAAGCGATTTGAGAAGCAGACTTCACACAAATGGAAATGTAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| 3UTR-3UTR GCA 90 bp | TTCCCTTCATCTTTCTGGCCAATAAAACCCGATGGTTTCCAAAGGGCACTGTATCATTTGTGTGAAGTCTaGTTCTCAAATCGCTTTATT | + |
|
Preference number: 2 (lower is better) Translates to: FPSSFWPIKPDGFQRALYHLCEV*FSNRFI Trigger: AATAAAGCGATTTGAGAAGCAGACTTCACACAAATG...ATACAGTGCCCTTTGGAAACCATCGGGTTTTATTGGCCAGAAAGATGAAGGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| 3UTR-3UTR CCA 90 bp | CTCTGGTGGAATTGCTTATTTCACTGCATAGCTAAATGTCATTGCTTGGCAAGTTTTATTGCTGCTGTGTaGAACTGTACATATCTGTAT | + |
|
Preference number: 2 (lower is better) Translates to: LWWNCLFHCIAKCHCLASFIAAV*NCTYLY Trigger: ATACAGATATGTACAGTTCCACACAGCAGCAATAAA...ACTTGCCAAGCAATGACATTTAGCTATGCAGTGAAATAAGCAATTCCACCAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| 3UTR GCA 72 bp | GTTTCCAAAGGGCACTGTATCTGCAGCCTGACACATTaGCTGCTTCTTCTCTTTCTCAACCTAACAGCTATA | + |
|
Preference number: 3 (lower is better) Translates to: VSKGHCICSLTH*LLLLFLNLTAI Trigger: TATAGCTGTTAGGTTGAGAAAGAGAAGAAGCAGGCAATGTGTCAGGCTGCAGATACAGTGCCCTTTGGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGGTGGAATTGCTTATTTCACTGCATAGCTAAATGTCATTGCTTGGCAAGTCTGCAGCCTGACACATaGCCTGCTTCTTCTCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LWWNCLFHCIAKCHCLASLQPDT*PASSLS Trigger: AGAAAGAGAAGAAGCAGGCAATGTGTCAGGCTGCAG...ACTTGCCAAGCAATGACATTTAGCTATGCAGTGAAATAAGCAATTCCACCAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| 3UTR GCA 72 bp | TGTTTTCCAAGAAAGTTTAAATGGACGTTGGTGTGCTaGTTTCAAGTTGCTGATGTCACTTGCCAAGCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: CFPRKFKWTLVC*FQVADVTCQAA Trigger: GGCAGCTTGGCAAGTGACATCAGCAACTTGAAAGCAGCACACCAACGTCCATTTAAACTTTCTTGGAAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| 3UTR CCA 72 bp | CACTGGTGTGTTTTCCAAGAAAGTTTAAATGGACGTTaGTGTGCTGCTTTCAAGTTGCTGATGTCACTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: HWCVFQESLNGR*CAAFKLLMSLA Trigger: GGCAAGTGACATCAGCAACTTGAAAGCAGCACACCAACGTCCATTTAAACTTTCTTGGAAAACACACCAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGGTGGAATTGCTTATTTCACTGCATAGCTAAATGTCATTGCTTGGCAAGTTCAGGATGCAGAGGTTaGAAGCTGATTCCGAAATGG | + |
|
Preference number: 3 (lower is better) Translates to: LWWNCLFHCIAKCHCLASSGCRG*KLIPKW Trigger: CCATTTCGGAATCAGCTTCAAACCTCTGCATCCTGA...ACTTGCCAAGCAATGACATTTAGCTATGCAGTGAAATAAGCAATTCCACCAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGTTATGGCGTTTTCCTTTTCCAAGTCAGGAGTATTAATGCACCACCGGATTCTCAAATCGCTTTATaGCTGCTGTGTGGAACTGTA | + |
|
Preference number: 3 (lower is better) Translates to: LSYGVFLFQVRSINAPPDSQIAL*LLCGTV Trigger: TACAGTTCCACACAGCAGCAATAAAGCGATTTGAGA...ATCCGGTGGTGCATTAATACTCCTGACTTGGAAAAGGAAAACGCCATAACTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| 3UTR CCA 72 bp | CCTTCAGGATGCAGAGGTTTGAAGCTGATTCCGAAATaGACGACATCAGTTACTATTGCAAAGAGATTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: PSGCRGLKLIPK*TTSVTIAKRFK Trigger: CTTGAATCTCTTTGCAATAGTAACTGATGTCGTCCATTTCGGAATCAGCTTCAAACCTCTGCATCCTGAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| 3UTR CCA 72 bp | ATGGTGACACTGGTGTGTTTTCCAAGAAAGTTTAAATaGACGTTGGTGTGCTGCTTTCAAGTTGCTGATGTC | + |
|
Preference number: 3 (lower is better) Translates to: MVTLVCFPRKFK*TLVCCFQVADV Trigger: GACATCAGCAACTTGAAAGCAGCACACCAACGTCCATTTAAACTTTCTTGGAAAACACACCAGTGTCACCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| 3UTR TCA 72 bp | CTTTATTGCTGCTGTGTGGAACTGTACATATCTGTATaGCTACCTTCAGGATGCAGAGGTTTGAAGCTGATT | + |
|
Preference number: 3 (lower is better) Translates to: LYCCCVELYISV*LPSGCRGLKLI Trigger: AATCAGCTTCAAACCTCTGCATCCTGAAGGTAGTCATACAGATATGTACAGTTCCACACAGCAGCAATAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| 3UTR CCA 72 bp | GAAGTCTGCTTCTCAAATCGCTTTATTGCTGCTGTGTaGAACTGTACATATCTGTATGACTACCTTCAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: EVCFSNRFIAAV*NCTYLYDYLQD Trigger: ATCCTGAAGGTAGTCATACAGATATGTACAGTTCCACACAGCAGCAATAAAGCGATTTGAGAAGCAGACTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| 3UTR TCA 72 bp | CTTCTTCTCTTTCTCAACCTAACAGCTATATCCTTCTaGTCTTGTGCTACGTTACATTCCTTAGTTCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LLLFLNLTAISF*SCATLHSLVQA Trigger: TGCCTGAACTAAGGAATGTAACGTAGCACAAGATCAGAAGGATATAGCTGTTAGGTTGAGAAAGAGAAGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| 3UTR CCA 72 bp | AAGCACTGTGTTTTAAACCAGGGTTCACTAGAGGTATaGAAGCTTGAAGGCAGAGCAGAAATGTTTGTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: KHCVLNQGSLEV*KLEGRAEMFVN Trigger: ATTAACAAACATTTCTGCTCTGCCTTCAAGCTTCCATACCTCTAGTGAACCCTGGTTTAAAACACAGTGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| 3UTR GCA 72 bp | AAAATAGTAATACTACATTTCCATTTGTGTGAAGTCTaGTTCTCAAATCGCTTTATTGCTGCTGTGTGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: KIVILHFHLCEV*FSNRFIAAVWN Trigger: GTTCCACACAGCAGCAATAAAGCGATTTGAGAAGCAGACTTCACACAAATGGAAATGTAGTATTACTATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS-3UTR CCA 90 bp | TGTATGACTACCTTCAGGATGCAGAGGTTTGAAGCTGATTCCGAAATGGACGACACTGCTGCCTCCCGCTaGGAGGCACAGGTGCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CMTTFRMQRFEADSEMDDTAASR*EAQVLR Trigger: TCTCAGCACCTGTGCCTCCCAGCGGGAGGCAGCAGT...GTCGTCCATTTCGGAATCAGCTTCAAACCTCTGCATCCTGAAGGTAGTCATACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS-3UTR GCA 90 bp | TTCCCTTCATCTTTCTGGCCAATAAAACCCGATGGTTTCCAAAGGGCACTGTATAGTGGCTGCTGCAGCTaGGGCATGCACAGTGGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: FPSSFWPIKPDGFQRALYSGCCS*GMHSGR Trigger: TCGGCCACTGTGCATGCCGCAGCTGCAGCAGCCACT...ATACAGTGCCCTTTGGAAACCATCGGGTTTTATTGGCCAGAAAGATGAAGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS-3UTR GCA 90 bp | AGTTTAAATGGACGTTGGTGTGCTGCTTTCAAGTTGCTGATGTCACTTGCCAAGGAAGCTGTGTGCAGCTaGAGTGGCTGCTGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLNGRWCAAFKLLMSLAKEAVCS*SGCCSC Trigger: GCAGCTGCAGCAGCCACTGCAGCTGCACACAGCTTC...CTTGGCAAGTGACATCAGCAACTTGAAAGCAGCACACCAACGTCCATTTAAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS-3UTR GCA 90 bp | TCAGGATGCAGAGGTTTGAAGCTGATTCCGAAATGGACGACATCAGTTACTATTAGCAGCAACAGCGGCTaGTGCCGCTGCATTGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: SGCRGLKLIPKWTTSVTISSNSG*CRCIGR Trigger: CCGTCCAATGCAGCGGCAGCAGCCGCTGTTGCTGCT...AATAGTAACTGATGTCGTCCATTTCGGAATCAGCTTCAAACCTCTGCATCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS-3UTR TCA 90 bp | TGTATGACTACCTTCAGGATGCAGAGGTTTGAAGCTGATTCCGAAATGGACGACATTGGACCTCATCACTaGGCTTGTAGCGTGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CMTTFRMQRFEADSEMDDIGPHH*ACSVPR Trigger: CCTGGGCACGCTACAAGCTCAGTGATGAGGTCCAAT...GTCGTCCATTTCGGAATCAGCTTCAAACCTCTGCATCCTGAAGGTAGTCATACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS-3UTR TCA 90 bp | TTCCCTTCATCTTTCTGGCCAATAAAACCCGATGGTTTCCAAAGGGCACTGTATGGGCAAACGTTGCTGTaGGGAGAGCAGAGCCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: FPSSFWPIKPDGFQRALYGQTLL*GEQSHE Trigger: CTCATGGCTCTGCTCTCCTCACAGCAACGTTTGCCC...ATACAGTGCCCTTTGGAAACCATCGGGTTTTATTGGCCAGAAAGATGAAGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS-3UTR TCA 90 bp | CAGAGGTTTGAAGCTGATTCCGAAATGGACGACATCAGTTACTATTGCAAAGAGCCAGTGCTTGTCTGCTaGGGACTGGAGGCTGCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QRFEADSEMDDISYYCKEPVLVC*GLEAAD Trigger: ATCCGCAGCCTCCAGTCCTCAGCAGACAAGCACTGG...CTCTTTGCAATAGTAACTGATGTCGTCCATTTCGGAATCAGCTTCAAACCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS-3UTR GCA 90 bp | TTATTGCTGCTGTGTGGAACTGTACATATCTGTATGACTACCTTCAGGATGCAGCAGAGGGAAGCTGTGTaGAGCTGCAGTGGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLLCGTVHICMTTFRMQQREAV*SCSGCC Trigger: GCAGCAGCCACTGCAGCTGCACACAGCTTCCCTCTG...CTGCATCCTGAAGGTAGTCATACAGATATGTACAGTTCCACACAGCAGCAATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS-3UTR GCA 90 bp | TTCCCTTCATCTTTCTGGCCAATAAAACCCGATGGTTTCCAAAGGGCACTGTATTGGGCTGATTGCTGTTaGAGCAGCAACAGCGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FPSSFWPIKPDGFQRALYWADCC*SSNSGC Trigger: GCAGCCGCTGTTGCTGCTGCAACAGCAATCAGCCCA...ATACAGTGCCCTTTGGAAACCATCGGGTTTTATTGGCCAGAAAGATGAAGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGGTTTGAAGCTGATTCCGAAATGGACGACATCAGTTACTATTGCAAAGAGAGGGCTGTGGGGAGATaGTGGAAAGCAGCTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QRFEADSEMDDISYYCKERAVGR*WKAAAQ Trigger: CTGGGCAGCTGCTTTCCACCATCTCCCCACAGCCCT...CTCTTTGCAATAGTAACTGATGTCGTCCATTTCGGAATCAGCTTCAAACCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS-3UTR CCA 90 bp | CTCAGTTATGGCGTTTTCCTTTTCCAAGTCAGGAGTATTAATGCACCACCGGATATGTGTGGAGTCCATTaGGCTGGAGCAGGGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSYGVFLFQVRSINAPPDMCGVH*AGAGLW Trigger: CCACAGCCCTGCTCCAGCCCAATGGACTCCACACAT...ATCCGGTGGTGCATTAATACTCCTGACTTGGAAAAGGAAAACGCCATAACTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS-3UTR CCA 90 bp | TGTATGACTACCTTCAGGATGCAGAGGTTTGAAGCTGATTCCGAAATGGACGACTTGTCTGCTGAGGACTaGAGGCTGCGGATACCGACA | + |
|
Preference number: 4 (lower is better) Translates to: CMTTFRMQRFEADSEMDDLSAED*RLRIPT Trigger: TGTCGGTATCCGCAGCCTCCAGTCCTCAGCAGACAA...GTCGTCCATTTCGGAATCAGCTTCAAACCTCTGCATCCTGAAGGTAGTCATACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS-3UTR TCA 90 bp | GTTTTCCAAGAAAGTTTAAATGGACGTTGGTGTGCTGCTTTCAAGTTGCTGATGGCACAGGTGCTGAGATaGGAGACAAGGCGCACGCGT | + |
|
Preference number: 4 (lower is better) Translates to: VFQESLNGRWCAAFKLLMAQVLR*ETRRTR Trigger: ACGCGTGCGCCTTGTCTCTCATCTCAGCACCTGTGC...CATCAGCAACTTGAAAGCAGCACACCAACGTCCATTTAAACTTTCTTGGAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS-3UTR TCA 90 bp | GTGTGTTTTCCAAGAAAGTTTAAATGGACGTTGGTGTGCTGCTTTCAAGTTGCTGGGAGGCACAGGTGCTaGGATGAGAGACAAGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: VCFPRKFKWTLVCCFQVAGRHRC*DERQGA Trigger: TGCGCCTTGTCTCTCATCTCAGCACCTGTGCCTCCC...AGCAACTTGAAAGCAGCACACCAACGTCCATTTAAACTTTCTTGGAAAACACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS-3UTR GCA 90 bp | TTTAAATGGACGTTGGTGTGCTGCTTTCAAGTTGCTGATGTCACTTGCCAAGCTATGGTGGAAAGCAGCTaGCCAGTGGTGAGGGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FKWTLVCCFQVADVTCQAMVESS*PVVRVQ Trigger: TTGCACCCTCACCACTGGGCAGCTGCTTTCCACCAT...AGCTTGGCAAGTGACATCAGCAACTTGAAAGCAGCACACCAACGTCCATTTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS-3UTR GCA 90 bp | TTCCCTTCATCTTTCTGGCCAATAAAACCCGATGGTTTCCAAAGGGCACTGTATTGCATGGGCAAACGTTaGTGTGAGGAGAGCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FPSSFWPIKPDGFQRALYCMGKR*CEESRA Trigger: GGCTCTGCTCTCCTCACAGCAACGTTTGCCCATGCA...ATACAGTGCCCTTTGGAAACCATCGGGTTTTATTGGCCAGAAAGATGAAGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS-3UTR CCA 90 bp | GTTTTCCAAGAAAGTTTAAATGGACGTTGGTGTGCTGCTTTCAAGTTGCTGATGAGAGGTGGAGAGAGGTaGCACGCAGGGTGCAACGGT | + |
|
Preference number: 4 (lower is better) Translates to: VFQESLNGRWCAAFKLLMRGGER*HAGCNG Trigger: ACCGTTGCACCCTGCGTGCCACCTCTCTCCACCTCT...CATCAGCAACTTGAAAGCAGCACACCAACGTCCATTTAAACTTTCTTGGAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS-3UTR TCA 90 bp | GTGTGTTTTCCAAGAAAGTTTAAATGGACGTTGGTGTGCTGCTTTCAAGTTGCTCCGACAAGGGTGGGCTaGTTGCTGTTGCAGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VCFPRKFKWTLVCCFQVAPTRVG*LLLQQQ Trigger: TTGCTGCTGCAACAGCAATCAGCCCACCCTTGTCGG...AGCAACTTGAAAGCAGCACACCAACGTCCATTTAAACTTTCTTGGAAAACACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS-3UTR CCA 90 bp | TCAGGATGCAGAGGTTTGAAGCTGATTCCGAAATGGACGACATCAGTTACTATTGATGGTGGTGGGCCATaGAGGATGTCATCACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SGCRGLKLIPKWTTSVTIDGGGP*RMSSLL Trigger: CAGCAGTGATGACATCCTCCATGGCCCACCACCATC...AATAGTAACTGATGTCGTCCATTTCGGAATCAGCTTCAAACCTCTGCATCCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS-3UTR CCA 90 bp | TTATTGCTGCTGTGTGGAACTGTACATATCTGTATGACTACCTTCAGGATGCAGCTGCGGCATGCACAGTaGCCGAAAGAGACAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLLLCGTVHICMTTFRMQLRHAQ*PKETEE Trigger: CTCTTCTGTCTCTTTCGGCCACTGTGCATGCCGCAG...CTGCATCCTGAAGGTAGTCATACAGATATGTACAGTTCCACACAGCAGCAATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS-3UTR GCA 90 bp | TTCCCTTCATCTTTCTGGCCAATAAAACCCGATGGTTTCCAAAGGGCACTGTATCCGAAGAGCAGAATCTaGATGGGCAAACGTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FPSSFWPIKPDGFQRALYPKSRI*MGKRCC Trigger: ACAGCAACGTTTGCCCATGCAGATTCTGCTCTTCGG...ATACAGTGCCCTTTGGAAACCATCGGGTTTTATTGGCCAGAAAGATGAAGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS-3UTR GCA 90 bp | CTCTGGTGGAATTGCTTATTTCACTGCATAGCTAAATGTCATTGCTTGGCAAGTCAAGGGTGGGCTGATTaGTGTTGCAGCAGCAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LWWNCLFHCIAKCHCLASQGWAD*CCSSNS Trigger: GCTGTTGCTGCTGCAACAGCAATCAGCCCACCCTTG...ACTTGCCAAGCAATGACATTTAGCTATGCAGTGAAATAAGCAATTCCACCAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| 3UTR CAA 72 bp | GGTTTCCAAAGGGCACTGTATCTGCAGCCTGACACATaGCCTGCTTCTTCTCTTTCTCAACCTAACAGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: GFQRALYLQPDT*PASSLSQPNSY Trigger: ATAGCTGTTAGGTTGAGAAAGAGAAGAAGCAGGCAATGTGTCAGGCTGCAGATACAGTGCCCTTTGGAAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS-3UTR CCA 90 bp | CTCTGGTGGAATTGCTTATTTCACTGCATAGCTAAATGTCATTGCTTGGCAAGTGTTGACTCTGATGTGTaGAGTCCATTGGGCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LWWNCLFHCIAKCHCLASVDSDV*SPLGWS Trigger: GCTCCAGCCCAATGGACTCCACACATCAGAGTCAAC...ACTTGCCAAGCAATGACATTTAGCTATGCAGTGAAATAAGCAATTCCACCAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGGTTTGAAGCTGATTCCGAAATGGACGACATCAGTTACTATTGCAAAGAGGCACTTCTGAAGATGTaGATAGGCGACATGGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QRFEADSEMDDISYYCKEALLKM*IGDMGL Trigger: CAACCCCATGTCGCCTATCCACATCTTCAGAAGTGC...CTCTTTGCAATAGTAACTGATGTCGTCCATTTCGGAATCAGCTTCAAACCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS-3UTR GCA 90 bp | CTCTGGTGGAATTGCTTATTTCACTGCATAGCTAAATGTCATTGCTTGGCAAGTTATTGTTTGTCCCAGTaGTTGTCTGCTGAGGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LWWNCLFHCIAKCHCLASYCLSQ*LSAEDW Trigger: CCAGTCCTCAGCAGACAAGCACTGGGACAAACAATA...ACTTGCCAAGCAATGACATTTAGCTATGCAGTGAAATAAGCAATTCCACCAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS-3UTR TCA 90 bp | CTCTGGTGGAATTGCTTATTTCACTGCATAGCTAAATGTCATTGCTTGGCAAGTTTTCTTGCCATAATCTaGGAGGTAGTTGTCGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LWWNCLFHCIAKCHCLASFLAII*EVVVGE Trigger: TTCACCGACAACTACCTCTCAGATTATGGCAAGAAA...ACTTGCCAAGCAATGACATTTAGCTATGCAGTGAAATAAGCAATTCCACCAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGGTTTGAAGCTGATTCCGAAATGGACGACATCAGTTACTATTGCAAAGAGCAGCCTTTTCTAACTTaGCAGATCCTTGTTTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QRFEADSEMDDISYYCKEQPFLT*QILVFQ Trigger: TTGAAAAACAAGGATCTGCCAAGTTAGAAAAGGCTG...CTCTTTGCAATAGTAACTGATGTCGTCCATTTCGGAATCAGCTTCAAACCTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| 3UTR CAA 72 bp | TCCATTTGTGTGAAGTCTGCTTCTCAAATCGCTTTATaGCTGCTGTGTGGAACTGTACATATCTGTATGACT | + |
|
Preference number: 4 (lower is better) Translates to: SICVKSASQIAL*LLCGTVHICMT Trigger: AGTCATACAGATATGTACAGTTCCACACAGCAGCAATAAAGCGATTTGAGAAGCAGACTTCACACAAATGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| 3UTR CAA 72 bp | ATTCATTGTGATTTGGGATCAAATGTAATCTCTAACTaGACCAGGGCATTTACATTATGTAGCTTTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: IHCDLGSNVISN*TRAFTLCSFSL Trigger: AAGGGAAAAGCTACATAATGTAAATGCCCTGGTCAAGTTAGAGATTACATTTGATCCCAAATCACAATGAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS GCA 90 bp | GGGTGGGCTGATTGCTGTTGCAGCAGCAACAGCGGCTGCTGCCGCTaGATTGGACGGGAGCATGGGAAAAGCCCCTGCGAAGGACAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GWADCCCSSNSGCCR*IGREHGKSPCEGQR Trigger: CCTCTGTCCTTCGCAGGGGCTTTTCCCATGCTCCCGTCCAATGCAGCGGCAGCAGCCGCTGTTGCTGCTGCAACAGCAATCAGCCCACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS GCA 90 bp | CTGCTGAGGACTGGAGGCTGCGGATACCGACAAGGGTGGGCTGATTaGTGTTGCAGCAGCAACAGCGGCTGCTGCCGCTGCATTGGACGG | + |
|
Preference number: 5 (lower is better) Translates to: LLRTGGCGYRQGWAD*CCSSNSGCCRCIGR Trigger: CCGTCCAATGCAGCGGCAGCAGCCGCTGTTGCTGCTGCAACAGCAATCAGCCCACCCTTGTCGGTATCCGCAGCCTCCAGTCCTCAGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS TCA 90 bp | TGGAGGATGTCATCACTGCTGCCTCCCGCTGGGAGGCACAGGTGCTaGGATGAGAGACAAGGCGCACGCGTAGTGGGTCCGACGGGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: WRMSSLLPPAGRHRC*DERQGARVVGPTGQ Trigger: TTGACCCGTCGGACCCACTACGCGTGCGCCTTGTCTCTCATCTCAGCACCTGTGCCTCCCAGCGGGAGGCAGCAGTGATGACATCCTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS CCA 90 bp | AGTGCTTGTCTGCTGAGGACTGGAGGCTGCGGATACCGACAAGGGTaGGCTGATTGCTGTTGCAGCAGCAACAGCGGCTGCTGCCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SACLLRTGGCGYRQG*ADCCCSSNSGCCRC Trigger: GCAGCGGCAGCAGCCGCTGTTGCTGCTGCAACAGCAATCAGCCCACCCTTGTCGGTATCCGCAGCCTCCAGTCCTCAGCAGACAAGCACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS TCA 90 bp | TTGTCTGCTGAGGACTGGAGGCTGCGGATACCGACAAGGGTGGGCTaGTTGCTGTTGCAGCAGCAACAGCGGCTGCTGCCGCTGCATTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSAEDWRLRIPTRVG*LLLQQQQRLLPLHW Trigger: CCAATGCAGCGGCAGCAGCCGCTGTTGCTGCTGCAACAGCAATCAGCCCACCCTTGTCGGTATCCGCAGCCTCCAGTCCTCAGCAGACAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS GCA 90 bp | CCCTGCGAAGGACAGAGGGAAGCTGTGTGCAGCTGCAGTGGCTGCTaGAGCTGCGGCATGCACAGTGGCCGAAAGAGACAGAAGAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PCEGQREAVCSCSGC*SCGMHSGRKRQKRG Trigger: ACCTCTCTTCTGTCTCTTTCGGCCACTGTGCATGCCGCAGCTGCAGCAGCCACTGCAGCTGCACACAGCTTCCCTCTGTCCTTCGCAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS TCA 90 bp | AAGAGAGGTGGAGAGAGGTGGCACGCAGGGTGCAACGGTGCCCCCTaGTGGCATCCGAAGAGCAGAATCTGCATGGGCAAACGTTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KRGGERWHAGCNGAP*WHPKSRICMGKRCC Trigger: ACAGCAACGTTTGCCCATGCAGATTCTGCTCTTCGGATGCCATCAGGGGGCACCGTTGCACCCTGCGTGCCACCTCTCTCCACCTCTCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS CCA 90 bp | ATGTGGATAGGCGACATGGGGTTGACTCTGATGTGTGGAGTCCATTaGGCTGGAGCAGGGCTGTGGGGAGATGGTGGAAAGCAGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: MWIGDMGLTLMCGVH*AGAGLWGDGGKQLP Trigger: GGGCAGCTGCTTTCCACCATCTCCCCACAGCCCTGCTCCAGCCCAATGGACTCCACACATCAGAGTCAACCCCATGTCGCCTATCCACAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS GCA 90 bp | AGGTTTATTGTTTGTCCCAGTGCTTGTCTGCTGAGGACTGGAGGCTaGGGATACCGACAAGGGTGGGCTGATTGCTGTTGCAGCAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: RFIVCPSACLLRTGG*GYRQGWADCCCSSN Trigger: GTTGCTGCTGCAACAGCAATCAGCCCACCCTTGTCGGTATCCGCAGCCTCCAGTCCTCAGCAGACAAGCACTGGGACAAACAATAAACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS GCA 90 bp | CAACTTCTGTCCCCCAGGGTTGGTAAGGTTTATTGTTTGTCCCAGTaGTTGTCTGCTGAGGACTGGAGGCTGCGGATACCGACAAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QLLSPRVGKVYCLSQ*LSAEDWRLRIPTRV Trigger: CACCCTTGTCGGTATCCGCAGCCTCCAGTCCTCAGCAGACAAGCACTGGGACAAACAATAAACCTTACCAACCCTGGGGGACAGAAGTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS TCA 90 bp | CTGATGGCATCCGAAGAGCAGAATCTGCATGGGCAAACGTTGCTGTaGGGAGAGCAGAGCCATGAGCAGAAGGCACTTCTGAAGATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LMASEEQNLHGQTLL*GEQSHEQKALLKMW Trigger: CCACATCTTCAGAAGTGCCTTCTGCTCATGGCTCTGCTCTCCTCACAGCAACGTTTGCCCATGCAGATTCTGCTCTTCGGATGCCATCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS-3UTR CAA 90 bp | AGTTTAAATGGACGTTGGTGTGCTGCTTTCAAGTTGCTGATGTCACTTGCCAAGGCTGCTGCCGCTGCATaGGACGGGAGCATGGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SLNGRWCAAFKLLMSLAKAAAAA*DGSMGK Trigger: TTTTCCCATGCTCCCGTCCAATGCAGCGGCAGCAGC...CTTGGCAAGTGACATCAGCAACTTGAAAGCAGCACACCAACGTCCATTTAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS-3UTR CAA 90 bp | AGTTTAAATGGACGTTGGTGTGCTGCTTTCAAGTTGCTGATGTCACTTGCCAAGTGTTTGTCCCAGTGCTaGTCTGCTGAGGACTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLNGRWCAAFKLLMSLAKCLSQC*SAEDWR Trigger: CCTCCAGTCCTCAGCAGACAAGCACTGGGACAAACA...CTTGGCAAGTGACATCAGCAACTTGAAAGCAGCACACCAACGTCCATTTAAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS-3UTR CAA 90 bp | GTGTGTTTTCCAAGAAAGTTTAAATGGACGTTGGTGTGCTGCTTTCAAGTTGCTATAGGCGACATGGGGTaGACTCTGATGTGTGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: VCFPRKFKWTLVCCFQVAIGDMG*TLMCGV Trigger: GACTCCACACATCAGAGTCAACCCCATGTCGCCTAT...AGCAACTTGAAAGCAGCACACCAACGTCCATTTAAACTTTCTTGGAAAACACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS-3UTR CAA 90 bp | TCAGGAGTATTAATGCACCACCGGATGGTGACACTGGTGTGTTTTCCAAGAAAGGGTAAGGTTTATTGTTaGTCCCAGTGCTTGTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SGVLMHHRMVTLVCFPRKGKVYC*SQCLSA Trigger: AGCAGACAAGCACTGGGACAAACAATAAACCTTACC...CTTTCTTGGAAAACACACCAGTGTCACCATCCGGTGGTGCATTAATACTCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS-3UTR CAA 90 bp | TTGGGATCAAATGTAATCTCTAACTTGACCAGGGCATTTACATTATGTAGCTTTGTAGTTGTCGGTGAATaGGACCTCATCACTGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LGSNVISNLTRAFTLCSFVVVGE*DLITEL Trigger: AAGCTCAGTGATGAGGTCCAATTCACCGACAACTAC...AAAGCTACATAATGTAAATGCCCTGGTCAAGTTAGAGATTACATTTGATCCCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGGTTTGAAGCTGATTCCGAAATGGACGACATCAGTTACTATTGCAAAGAGGTTTTTCAAAAGCTGTaGGCACTAGTCTTCTCAATT | + |
|
Preference number: 5 (lower is better) Translates to: QRFEADSEMDDISYYCKEVFQKL*ALVFSI Trigger: AATTGAGAAGACTAGTGCCAACAGCTTTTGAAAAAC...CTCTTTGCAATAGTAACTGATGTCGTCCATTTCGGAATCAGCTTCAAACCTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGGTTTGAAGCTGATTCCGAAATGGACGACATCAGTTACTATTGCAAAGAGATGATCCACTGTCATTaGCAATATTTCAGCCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QRFEADSEMDDISYYCKEMIHCH*QYFSLF Trigger: GAAAAGGCTGAAATATTGCAAATGACAGTGGATCAT...CTCTTTGCAATAGTAACTGATGTCGTCCATTTCGGAATCAGCTTCAAACCTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS-3UTR CAA 90 bp | ATAAAGAAGCACTGTGTTTTAAACCAGGGTTCACTAGAGGTATGGAAGCTTGAATCAGCCTTTTCTAACTaGGCAGATCCTTGTTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: IKKHCVLNQGSLEVWKLESAFSN*ADPCFS Trigger: TGAAAAACAAGGATCTGCCAAGTTAGAAAAGGCTGA...TTCAAGCTTCCATACCTCTAGTGAACCCTGGTTTAAAACACAGTGCTTCTTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS TCA 72 bp | TCATCACTGCTGCCTCCCGCTGGGAGGCACAGGTGCTaGGATGAGAGACAAGGCGCACGCGTAGTGGGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: SSLLPPAGRHRC*DERQGARVVGP Trigger: CGGACCCACTACGCGTGCGCCTTGTCTCTCATCTCAGCACCTGTGCCTCCCAGCGGGAGGCAGCAGTGATGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS TCA 72 bp | GAGGACTGGAGGCTGCGGATACCGACAAGGGTGGGCTaGTTGCTGTTGCAGCAGCAACAGCGGCTGCTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: EDWRLRIPTRVG*LLLQQQQRLLP Trigger: CGGCAGCAGCCGCTGTTGCTGCTGCAACAGCAATCAGCCCACCCTTGTCGGTATCCGCAGCCTCCAGTCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS CAA 72 bp | GCTGTTGCAGCAGCAACAGCGGCTGCTGCCGCTGCATaGGACGGGAGCATGGGAAAAGCCCCTGCGAAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: AVAAATAAAAAA*DGSMGKAPAKD Trigger: GTCCTTCGCAGGGGCTTTTCCCATGCTCCCGTCCAATGCAGCGGCAGCAGCCGCTGTTGCTGCTGCAACAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS GCA 72 bp | TGGGCTGATTGCTGTTGCAGCAGCAACAGCGGCTGCTaGCGCTGCATTGGACGGGAGCATGGGAAAAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: WADCCCSSNSGC*RCIGREHGKSP Trigger: GGGGCTTTTCCCATGCTCCCGTCCAATGCAGCGGCAGCAGCCGCTGTTGCTGCTGCAACAGCAATCAGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS GCA 72 bp | GGGTGGGCTGATTGCTGTTGCAGCAGCAACAGCGGCTaGTGCCGCTGCATTGGACGGGAGCATGGGAAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: GWADCCCSSNSG*CRCIGREHGKS Trigger: GCTTTTCCCATGCTCCCGTCCAATGCAGCGGCAGCAGCCGCTGTTGCTGCTGCAACAGCAATCAGCCCACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS GCA 72 bp | GGCTGCGGATACCGACAAGGGTGGGCTGATTGCTGTTaGAGCAGCAACAGCGGCTGCTGCCGCTGCATTGGA | + |
|
Preference number: 6 (lower is better) Translates to: GCGYRQGWADCC*SSNSGCCRCIG Trigger: TCCAATGCAGCGGCAGCAGCCGCTGTTGCTGCTGCAACAGCAATCAGCCCACCCTTGTCGGTATCCGCAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS CCA 72 bp | CTGCTGAGGACTGGAGGCTGCGGATACCGACAAGGGTaGGCTGATTGCTGTTGCAGCAGCAACAGCGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LLRTGGCGYRQG*ADCCCSSNSGC Trigger: GCAGCCGCTGTTGCTGCTGCAACAGCAATCAGCCCACCCTTGTCGGTATCCGCAGCCTCCAGTCCTCAGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS TCA 72 bp | GGAGAGAGGTGGCACGCAGGGTGCAACGGTGCCCCCTaGTGGCATCCGAAGAGCAGAATCTGCATGGGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: GERWHAGCNGAP*WHPKSRICMGK Trigger: TTTGCCCATGCAGATTCTGCTCTTCGGATGCCATCAGGGGGCACCGTTGCACCCTGCGTGCCACCTCTCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS GCA 72 bp | GATTGCTGTTGCAGCAGCAACAGCGGCTGCTGCCGCTaGATTGGACGGGAGCATGGGAAAAGCCCCTGCGAA | + |
|
Preference number: 6 (lower is better) Translates to: DCCCSSNSGCCR*IGREHGKSPCE Trigger: TTCGCAGGGGCTTTTCCCATGCTCCCGTCCAATGCAGCGGCAGCAGCCGCTGTTGCTGCTGCAACAGCAATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS GCA 72 bp | GTTTGTCCCAGTGCTTGTCTGCTGAGGACTGGAGGCTaGGGATACCGACAAGGGTGGGCTGATTGCTGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: VCPSACLLRTGG*GYRQGWADCCC Trigger: GCAACAGCAATCAGCCCACCCTTGTCGGTATCCGCAGCCTCCAGTCCTCAGCAGACAAGCACTGGGACAAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS CAA 90 bp | CTTCTGTCCCCCAGGGTTGGTAAGGTTTATTGTTTGTCCCAGTGCTaGTCTGCTGAGGACTGGAGGCTGCGGATACCGACAAGGGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLSPRVGKVYCLSQC*SAEDWRLRIPTRVG Trigger: GCCCACCCTTGTCGGTATCCGCAGCCTCCAGTCCTCAGCAGACAAGCACTGGGACAAACAATAAACCTTACCAACCCTGGGGGACAGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS GCA 72 bp | TGGCATCCGAAGAGCAGAATCTGCATGGGCAAACGTTaGTGTGAGGAGAGCAGAGCCATGAGCAGAAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: WHPKSRICMGKR*CEESRAMSRRH Trigger: GTGCCTTCTGCTCATGGCTCTGCTCTCCTCACAGCAACGTTTGCCCATGCAGATTCTGCTCTTCGGATGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS GCA 72 bp | TCCCCCAGGGTTGGTAAGGTTTATTGTTTGTCCCAGTaGTTGTCTGCTGAGGACTGGAGGCTGCGGATACCG | + |
|
Preference number: 6 (lower is better) Translates to: SPRVGKVYCLSQ*LSAEDWRLRIP Trigger: CGGTATCCGCAGCCTCCAGTCCTCAGCAGACAAGCACTGGGACAAACAATAAACCTTACCAACCCTGGGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS TCA 72 bp | TCCGAAGAGCAGAATCTGCATGGGCAAACGTTGCTGTaGGGAGAGCAGAGCCATGAGCAGAAGGCACTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SEEQNLHGQTLL*GEQSHEQKALL Trigger: CAGAAGTGCCTTCTGCTCATGGCTCTGCTCTCCTCACAGCAACGTTTGCCCATGCAGATTCTGCTCTTCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS CAA 72 bp | CCCAGGGTTGGTAAGGTTTATTGTTTGTCCCAGTGCTaGTCTGCTGAGGACTGGAGGCTGCGGATACCGACA | + |
|
Preference number: 6 (lower is better) Translates to: PRVGKVYCLSQC*SAEDWRLRIPT Trigger: TGTCGGTATCCGCAGCCTCCAGTCCTCAGCAGACAAGCACTGGGACAAACAATAAACCTTACCAACCCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS CAA 90 bp | AAAAGGCTCCAACTTCTGTCCCCCAGGGTTGGTAAGGTTTATTGTTaGTCCCAGTGCTTGTCTGCTGAGGACTGGAGGCTGCGGATACCG | + |
|
Preference number: 6 (lower is better) Translates to: KRLQLLSPRVGKVYC*SQCLSAEDWRLRIP Trigger: CGGTATCCGCAGCCTCCAGTCCTCAGCAGACAAGCACTGGGACAAACAATAAACCTTACCAACCCTGGGGGACAGAAGTTGGAGCCTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS CCA 72 bp | GAGCAGAGCCATGAGCAGAAGGCACTTCTGAAGATGTaGATAGGCGACATGGGGTTGACTCTGATGTGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: EQSHEQKALLKM*IGDMGLTLMCG Trigger: TCCACACATCAGAGTCAACCCCATGTCGCCTATCCACATCTTCAGAAGTGCCTTCTGCTCATGGCTCTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS CAA 72 bp | CAACTTCTGTCCCCCAGGGTTGGTAAGGTTTATTGTTaGTCCCAGTGCTTGTCTGCTGAGGACTGGAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: QLLSPRVGKVYC*SQCLSAEDWRL Trigger: CAGCCTCCAGTCCTCAGCAGACAAGCACTGGGACAAACAATAAACCTTACCAACCCTGGGGGACAGAAGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||
| CDS TCA 72 bp | CCACTTCTGTCAAGCACTCTCGGAATCCAATGCTCATaGAGTCTGTGGCAAGAGCATGGGCATCAAAGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: PLLSSTLGIQCS*SLWQEHGHQSS Trigger: GCTACTTTGATGCCCATGCTCTTGCCACAGACTTCATGAGCATTGGATTCCGAGAGTGCTTGACAGAAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019924.9 |
||