Pregenerated sensors for HEY1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040289Ensembl transcript IDs: ENSMUST00000042412.5
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGGATTCAGGGCACAGACACCTTTCTCCCTTCACCTCACTGCTCTaGGAGGCAGAGAGAGAGCCAGTGCTCTCCAGTAAAGCTGCGCAT | + |
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Preference number: 1 (lower is better) Translates to: LDSGHRHLSPFTSLL*EAEREPVLSSKAAH Trigger: ATGCGCAGCTTTACTGGAGAGCACTGGCTCTCTCTCTGCCTCTCAGAGCAGTGAGGTGAAGGGAGAAAGGTGTCTGTGCCCTGAATCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| 3UTR CCA 90 bp | AAACCTGAAATATCAGAAGAGAAAAGCCAAGCAGGCCACAGTAGCTaGTCATCTGGATTCAGGGCACAGACACCTTTCTCCCTTCACCTC | + |
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Preference number: 1 (lower is better) Translates to: KPEISEEKSQAGHSS*SSGFRAQTPFSLHL Trigger: GAGGTGAAGGGAGAAAGGTGTCTGTGCCCTGAATCCAGATGACCAGCTACTGTGGCCTGCTTGGCTTTTCTCTTCTGATATTTCAGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| 3UTR GCA 90 bp | GTGCTCTCCAGTAAAGCTGCGCATCTGATTTGTCAACGCTTTGTTTaGAAATATAATGCTTTGCTGACCCTCCCTCCCCAAAGAATACCA | + |
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Preference number: 1 (lower is better) Translates to: VLSSKAAHLICQRFV*KYNALLTLPPQRIP Trigger: TGGTATTCTTTGGGGAGGGAGGGTCAGCAAAGCATTATATTTGCAAACAAAGCGTTGACAAATCAGATGCGCAGCTTTACTGGAGAGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| 3UTR-3UTR CCA 90 bp | AGAGTGCTTAGGGCTGCCAAGTGCAGGCAAGGTCTACATAACTGTCTTGCTTGCAACGGATCAAAGTGTTaGTTCGTAATCACTACCTCA | + |
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Preference number: 2 (lower is better) Translates to: RVLRAAKCRQGLHNCLACNGSKC*FVITTS Trigger: TGAGGTAGTGATTACGAACCAACACTTTGATCCGTT...GCAAGCAAGACAGTTATGTAGACCTTGCCTGCACTTGGCAGCCCTAAGCACTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| 3UTR-3UTR CCA 90 bp | CACATCAATACAACAGAGGTCAAACCTAGTTCAGAGGAGCTGTTCAAATTATACCCGTCCCAACACACCTaGGATTTTAAGCTTTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: HINTTEVKPSSEELFKLYPSQHT*DFKLSP Trigger: AGGGGAAAGCTTAAAATCCCAGGTGTGTTGGGACGG...GTATAATTTGAACAGCTCCTCTGAACTAGGTTTGACCTCTGTTGTATTGATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| 3UTR CAA 90 bp | TACAACACCTCGGTCCATCAAAGTAGTAACAAAATCGTGTTAACATaGAGCATAGTGGCGTGCGAAATTAATCCTCAAAAGATTACAACT | + |
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Preference number: 2 (lower is better) Translates to: YNTSVHQSSNKIVLT*SIVACEINPQKITT Trigger: AGTTGTAATCTTTTGAGGATTAATTTCGCACGCCACTATGCTCAATGTTAACACGATTTTGTTACTACTTTGATGGACCGAGGTGTTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| 3UTR TCA 72 bp | GGGCACAGACACCTTTCTCCCTTCACCTCACTGCTCTaGGAGGCAGAGAGAGAGCCAGTGCTCTCCAGTAAA | + |
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Preference number: 3 (lower is better) Translates to: GHRHLSPFTSLL*EAEREPVLSSK Trigger: TTTACTGGAGAGCACTGGCTCTCTCTCTGCCTCTCAGAGCAGTGAGGTGAAGGGAGAAAGGTGTCTGTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| 3UTR CCA 72 bp | ATATCAGAAGAGAAAAGCCAAGCAGGCCACAGTAGCTaGTCATCTGGATTCAGGGCACAGACACCTTTCTCC | + |
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Preference number: 3 (lower is better) Translates to: ISEEKSQAGHSS*SSGFRAQTPFS Trigger: GGAGAAAGGTGTCTGTGCCCTGAATCCAGATGACCAGCTACTGTGGCCTGCTTGGCTTTTCTCTTCTGATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| 3UTR-3UTR CAA 90 bp | CTTATACACACCAGGAAACAGACCCCAAACACTAATGTTAAGATTCCCCACGCTGACTTTAGGGTGGTGTaGACAACCGTCCCAACACAC | + |
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Preference number: 3 (lower is better) Translates to: LIHTRKQTPNTNVKIPHADFRVV*TTVPTH Trigger: GTGTGTTGGGACGGTTGTCAACACCACCCTAAAGTC...AGCGTGGGGAATCTTAACATTAGTGTTTGGGGTCTGTTTCCTGGTGTGTATAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| 3UTR TCA 72 bp | CTTTTTCCTGACTTACTGGCGACTTTAGGGTGGTGTTaGCAACCGTCCCAACACACCTGGGATTTTAAGCTT | + |
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Preference number: 3 (lower is better) Translates to: LFPDLLATLGWC*QPSQHTWDFKL Trigger: AAGCTTAAAATCCCAGGTGTGTTGGGACGGTTGTCAACACCACCCTAAAGTCGCCAGTAAGTCAGGAAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| 3UTR TCA 72 bp | TTTGTCAACGCTTTGTTTGCAAATATAATGCTTTGCTaGCCCTCCCTCCCCAAAGAATACCACTTATACAAC | + |
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Preference number: 3 (lower is better) Translates to: FVNALFANIMLC*PSLPKEYHLYN Trigger: GTTGTATAAGTGGTATTCTTTGGGGAGGGAGGGTCAGCAAAGCATTATATTTGCAAACAAAGCGTTGACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS-3UTR CCA 90 bp | GCAGGCCACAGTAGCTGGTCATCTGGATTCAGGGCACAGACACCTTTCTCCCTTGCCGGCGCCTCCGGATaGGCAGAAGCCAGCCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: AGHSSWSSGFRAQTPFSLAGASG*AEASLP Trigger: GGGCAGGCTGGCTTCTGCCCATCCGGAGGCGCCGGC...AAGGGAGAAAGGTGTCTGTGCCCTGAATCCAGATGACCAGCTACTGTGGCCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS-3UTR TCA 90 bp | AGAGTGCTTAGGGCTGCCAAGTGCAGGCAAGGTCTACATAACTGTCTTGCTTGCTGTCCGAGGCCACCGTaGGCGCCGCTCGCGGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: RVLRAAKCRQGLHNCLACCPRPP*APLAAS Trigger: GGAAGCCGCGAGCGGCGCTCACGGTGGCCTCGGACA...GCAAGCAAGACAGTTATGTAGACCTTGCCTGCACTTGGCAGCCCTAAGCACTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS-3UTR CCA 90 bp | GCAGGCCACAGTAGCTGGTCATCTGGATTCAGGGCACAGACACCTTTCTCCCTTAGGGTGTGCGATGTGTaGGTGATGTCCGAAGGCACT | + |
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Preference number: 4 (lower is better) Translates to: AGHSSWSSGFRAQTPFSLRVCDV*VMSEGT Trigger: AGTGCCTTCGGACATCACCCACACATCGCACACCCT...AAGGGAGAAAGGTGTCTGTGCCCTGAATCCAGATGACCAGCTACTGTGGCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS-3UTR TCA 90 bp | GAGGCACAGAACAAACAACGGATCAAAGTGTTGGTTCGTAATCACTACCTCAATGCCAGCCTGCCCTGGTaGTGCGGCTCCGTGGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: EAQNKQRIKVLVRNHYLNASLPW*CGSVGD Trigger: GTCACCCACGGAGCCGCATCACCAGGGCAGGCTGGC...ATTGAGGTAGTGATTACGAACCAACACTTTGATCCGTTGTTTGTTCTGTGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS-3UTR CCA 90 bp | GCAGGCCACAGTAGCTGGTCATCTGGATTCAGGGCACAGACACCTTTCTCCCTTCTCTCCGTCTTTTCCTaGCCAAAACCTGGGACGATG | + |
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Preference number: 4 (lower is better) Translates to: AGHSSWSSGFRAQTPFSLLSVFS*PKPGTM Trigger: CATCGTCCCAGGTTTTGGCCAGGAAAAGACGGAGAG...AAGGGAGAAAGGTGTCTGTGCCCTGAATCCAGATGACCAGCTACTGTGGCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS-3UTR GCA 90 bp | GTGAAATCCGTGAGACTGAGAGTGCTTAGGGCTGCCAAGTGCAGGCAAGGTCTAAAGGTCTATAGGGCTTaGCAAGGTTTGCTGCCTGCG | + |
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Preference number: 4 (lower is better) Translates to: VKSVRLRVLRAAKCRQGLKVYRA*QGLLPA Trigger: CGCAGGCAGCAAACCTTGGCAAGCCCTATAGACCTT...TAGACCTTGCCTGCACTTGGCAGCCCTAAGCACTCTCAGTCTCACGGATTTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS-3UTR CCA 90 bp | GTTCTAGGAAAATCGGGTTGTGTTTCACAGGCACCAAGCTACTTTCAGACTCCGTTCCCGTGGCCATTCTaGGGCAGCAGCAGAGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: VLGKSGCVSQAPSYFQTPFPWPF*GSSRGC Trigger: ACACCCTCTGCTGCTGCCCCAGAATGGCCACGGGAA...CGGAGTCTGAAAGTAGCTTGGTGCCTGTGAAACACAACCCGATTTTCCTAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS-3UTR CCA 90 bp | GTGAAATCCGTGAGACTGAGAGTGCTTAGGGCTGCCAAGTGCAGGCAAGGTCTACCTTTTCCACCTCGATaGTCTCGTCCAGCTCACTAT | + |
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Preference number: 4 (lower is better) Translates to: VKSVRLRVLRAAKCRQGLPFPPR*SRPAHY Trigger: ATAGTGAGCTGGACGAGACCATCGAGGTGGAAAAGG...TAGACCTTGCCTGCACTTGGCAGCCCTAAGCACTCTCAGTCTCACGGATTTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS-3UTR TCA 90 bp | GTTGTGTTTCACAGGCACCAAGCTACTTTCAGACTCCGATCGCTTACGCAGGTCCAGACAAACTGTTATTaGTTCGGTCTCGTCGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: VVFHRHQATFRLRSLTQVQTNCY*FGLVGA Trigger: AGCGCCGACGAGACCGAATCAATAACAGTTTGTCTG...GACCTGCGTAAGCGATCGGAGTCTGAAAGTAGCTTGGTGCCTGTGAAACACAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS-3UTR TCA 90 bp | GTTCTAGGAAAATCGGGTTGTGTTTCACAGGCACCAAGCTACTTTCAGACTCCGGGGATGCGTAGTTGTTaGGATGGGAGACCAGGCGAA | + |
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Preference number: 4 (lower is better) Translates to: VLGKSGCVSQAPSYFQTPGMRSC*DGRPGE Trigger: TTCGCCTGGTCTCCCATCTCAACAACTACGCATCCC...CGGAGTCTGAAAGTAGCTTGGTGCCTGTGAAACACAACCCGATTTTCCTAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS-3UTR GCA 90 bp | CACATCAATACAACAGAGGTCAAACCTAGTTCAGAGGAGCTGTTCAAATTATACGGGCAGAAGCCAGCCTaGCCTGGTGATGCGGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: HINTTEVKPSSEELFKLYGQKPA*PGDAAP Trigger: CGGAGCCGCATCACCAGGGCAGGCTGGCTTCTGCCC...GTATAATTTGAACAGCTCCTCTGAACTAGGTTTGACCTCTGTTGTATTGATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS-3UTR GCA 90 bp | ACGGAATCATTCTCAGACAGACAGGTTTACAAAATAAATGAGGCACAGAACAAATGGGTGACGCCGCGGTaGCAGCGTTCCCGTGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: TESFSDRQVYKINEAQNKWVTPR*QRSRGH Trigger: ATGGCCACGGGAACGCTGGCACCGCGGCGTCACCCA...TTTGTTCTGTGCCTCATTTATTTTGTAAACCTGTCTGTCTGAGAATGATTCCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS-3UTR GCA 90 bp | GAGGCACAGAACAAACAACGGATCAAAGTGTTGGTTCGTAATCACTACCTCAATCCAAGGTTTGCTGCCTaGGTGGGTGTCGAAGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: EAQNKQRIKVLVRNHYLNPRFAA*VGVEGL Trigger: GAGCCCTTCGACACCCACGCAGGCAGCAAACCTTGG...ATTGAGGTAGTGATTACGAACCAACACTTTGATCCGTTGTTTGTTCTGTGCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS-3UTR GCA 90 bp | GAGGCACAGAACAAACAACGGATCAAAGTGTTGGTTCGTAATCACTACCTCAATGGGCTTGCCAAGGTTTaGTGCCTGCGTGGGTGTCGA | + |
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Preference number: 4 (lower is better) Translates to: EAQNKQRIKVLVRNHYLNGLAKV*CLRGCR Trigger: TCGACACCCACGCAGGCAGCAAACCTTGGCAAGCCC...ATTGAGGTAGTGATTACGAACCAACACTTTGATCCGTTGTTTGTTCTGTGCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS-3UTR CCA 90 bp | GTTCTAGGAAAATCGGGTTGTGTTTCACAGGCACCAAGCTACTTTCAGACTCCGATGTCGTTGGGGACATaGAACACAGCGCCGAACTCA | + |
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Preference number: 4 (lower is better) Translates to: VLGKSGCVSQAPSYFQTPMSLGT*NTAPNS Trigger: TGAGTTCGGCGCTGTGTTCCATGTCCCCAACGACAT...CGGAGTCTGAAAGTAGCTTGGTGCCTGTGAAACACAACCCGATTTTCCTAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS-3UTR CCA 90 bp | CACATCAATACAACAGAGGTCAAACCTAGTTCAGAGGAGCTGTTCAAATTATACGTGCCAGCGTTCCCGTaGCCATTCTGGGGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: HINTTEVKPSSEELFKLYVPAFP*PFWGSS Trigger: GCTGCTGCCCCAGAATGGCCACGGGAACGCTGGCAC...GTATAATTTGAACAGCTCCTCTGAACTAGGTTTGACCTCTGTTGTATTGATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS-3UTR CCA 90 bp | CTTATACACACCAGGAAACAGACCCCAAACACTAATGTTAAGATTCCCCACGCTAGAGGAGAGCAGCGGTaGAGACAGTTTGGAGGCCGA | + |
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Preference number: 4 (lower is better) Translates to: LIHTRKQTPNTNVKIPHARGEQR*RQFGGR Trigger: TCGGCCTCCAAACTGTCTCCACCGCTGCTCTCCTCT...AGCGTGGGGAATCTTAACATTAGTGTTTGGGGTCTGTTTCCTGGTGTGTATAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS-3UTR GCA 90 bp | GAGGCACAGAACAAACAACGGATCAAAGTGTTGGTTCGTAATCACTACCTCAATCTTGCCAAGGTTTGCTaGCTGCGTGGGTGTCGAAGG | + |
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Preference number: 4 (lower is better) Translates to: EAQNKQRIKVLVRNHYLNLAKVC*LRGCRR Trigger: CCTTCGACACCCACGCAGGCAGCAAACCTTGGCAAG...ATTGAGGTAGTGATTACGAACCAACACTTTGATCCGTTGTTTGTTCTGTGCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS-3UTR CCA 90 bp | GAGGCACAGAACAAACAACGGATCAAAGTGTTGGTTCGTAATCACTACCTCAATGGTTTGCTGCCTGCGTaGGTGTCGAAGGGCTCAGTA | + |
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Preference number: 4 (lower is better) Translates to: EAQNKQRIKVLVRNHYLNGLLPA*VSKGSV Trigger: TACTGAGCCCTTCGACACCCACGCAGGCAGCAAACC...ATTGAGGTAGTGATTACGAACCAACACTTTGATCCGTTGTTTGTTCTGTGCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS-3UTR CCA 90 bp | CACAACACATCAATACAACAGAGGTCAAACCTAGTTCAGAGGAGCTGTTCAAATCTGGGACGATGTCGTTaGGGACATGGAACACAGCGC | + |
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Preference number: 4 (lower is better) Translates to: HNTSIQQRSNLVQRSCSNLGRCR*GHGTQR Trigger: GCGCTGTGTTCCATGTCCCCAACGACATCGTCCCAG...ATTTGAACAGCTCCTCTGAACTAGGTTTGACCTCTGTTGTATTGATGTGTTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS-3UTR CCA 90 bp | CTTATACACACCAGGAAACAGACCCCAAACACTAATGTTAAGATTCCCCACGCTGCTTCTCAAAGGCACTaGGTACCAGCCTTCTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: LIHTRKQTPNTNVKIPHAASQRH*VPAFSA Trigger: AGCTGAGAAGGCTGGTACCCAGTGCCTTTGAGAAGC...AGCGTGGGGAATCTTAACATTAGTGTTTGGGGTCTGTTTCCTGGTGTGTATAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS-3UTR GCA 90 bp | TGCTTTTTATTTAGTCACAACACATCAATACAACAGAGGTCAAACCTAGTTCAGGGCTTCCCGCTGGGATaGGTAGTTGTTGAGATGGGA | + |
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Preference number: 4 (lower is better) Translates to: CFLFSHNTSIQQRSNLVQGFPLG*VVVEMG Trigger: TCCCATCTCAACAACTACGCATCCCAGCGGGAAGCC...CTGAACTAGGTTTGACCTCTGTTGTATTGATGTGTTGTGACTAAATAAAAAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS-3UTR TCA 90 bp | TGCTTTTTATTTAGTCACAACACATCAATACAACAGAGGTCAAACCTAGTTCAGCATCGAGTCCTTCAATaGTGCTCAGATAACGGGCAA | + |
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Preference number: 4 (lower is better) Translates to: CFLFSHNTSIQQRSNLVQHRVLQ*CSDNGQ Trigger: TTGCCCGTTATCTGAGCATCATTGAAGGACTCGATG...CTGAACTAGGTTTGACCTCTGTTGTATTGATGTGTTGTGACTAAATAAAAAGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| 3UTR CAA 72 bp | CTGATTTGTCAACGCTTTGTTTGCAAATATAATGCTTaGCTGACCCTCCCTCCCCAAAGAATACCACTTATA | + |
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Preference number: 4 (lower is better) Translates to: LICQRFVCKYNA*LTLPPQRIPLI Trigger: TATAAGTGGTATTCTTTGGGGAGGGAGGGTCAGCAAAGCATTATATTTGCAAACAAAGCGTTGACAAATCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| 3UTR CAA 72 bp | TCGGTCCATCAAAGTAGTAACAAAATCGTGTTAACATaGAGCATAGTGGCGTGCGAAATTAATCCTCAAAAG | + |
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Preference number: 4 (lower is better) Translates to: SVHQSSNKIVLT*SIVACEINPQK Trigger: CTTTTGAGGATTAATTTCGCACGCCACTATGCTCAATGTTAACACGATTTTGTTACTACTTTGATGGACCGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS GCA 90 bp | AAGCCAGCCTGCCCTGGTGATGCGGCTCCGTGGGTGACGCCGCGGTaGCAGCGTTCCCGTGGCCATTCTGGGGCAGCAGCAGAGGGTGTG | + |
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Preference number: 5 (lower is better) Translates to: KPACPGDAAPWVTPR*QRSRGHSGAAAEGV Trigger: CACACCCTCTGCTGCTGCCCCAGAATGGCCACGGGAACGCTGGCACCGCGGCGTCACCCACGGAGCCGCATCACCAGGGCAGGCTGGCTT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS GCA 90 bp | GTGTCCGAGGCCACCGTGAGCGCCGCTCGCGGCTTCCCGCTGGGATaGGTAGTTGTTGAGATGGGAGACCAGGCGAACGCGAAGCGGGTC | + |
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Preference number: 5 (lower is better) Translates to: VSEATVSAARGFPLG*VVVEMGDQANAKRV Trigger: GACCCGCTTCGCGTTCGCCTGGTCTCCCATCTCAACAACTACGCATCCCAGCGGGAAGCCGCGAGCGGCGCTCACGGTGGCCTCGGACAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS TCA 90 bp | CACCGTGAGCGCCGCTCGCGGCTTCCCGCTGGGATGCGTAGTTGTTaGGATGGGAGACCAGGCGAACGCGAAGCGGGTCGGAGGCATCGA | + |
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Preference number: 5 (lower is better) Translates to: HRERRSRLPAGMRSC*DGRPGEREAGRRHR Trigger: TCGATGCCTCCGACCCGCTTCGCGTTCGCCTGGTCTCCCATCTCAACAACTACGCATCCCAGCGGGAAGCCGCGAGCGGCGCTCACGGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS CCA 90 bp | AGGCTGAGAGCGAGGCCACAGAGGAGAGCAGCGGTGGAGACAGTTTaGAGGCCGAGGTCACCACGGGAAGCACCGGTCCCAAGCCGCCAC | + |
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Preference number: 5 (lower is better) Translates to: RLRARPQRRAAVETV*RPRSPREAPVPSRH Trigger: GTGGCGGCTTGGGACCGGTGCTTCCCGTGGTGACCTCGGCCTCCAAACTGTCTCCACCGCTGCTCTCCTCTGTGGCCTCGCTCTCAGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS TCA 90 bp | AGACCAGGCGAACGCGAAGCGGGTCGGAGGCATCGAGTCCTTCAATaGTGCTCAGATAACGGGCAACTTCGGCCAGGCATTCCCGAAACC | + |
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Preference number: 5 (lower is better) Translates to: RPGEREAGRRHRVLQ*CSDNGQLRPGIPET Trigger: GGTTTCGGGAATGCCTGGCCGAAGTTGCCCGTTATCTGAGCATCATTGAAGGACTCGATGCCTCCGACCCGCTTCGCGTTCGCCTGGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS CCA 90 bp | TTGCCAAGGTTTGCTGCCTGCGTGGGTGTCGAAGGGCTCAGTAGGTaGAAGGAGCTGAAGGAAAAGGGGAAGGCTGAGAGCGAGGCCACA | + |
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Preference number: 5 (lower is better) Translates to: LPRFAACVGVEGLSR*KELKEKGKAESEAT Trigger: TGTGGCCTCGCTCTCAGCCTTCCCCTTTTCCTTCAGCTCCTTCCACCTACTGAGCCCTTCGACACCCACGCAGGCAGCAAACCTTGGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS CCA 90 bp | GATGCCTCTCCGTCTTTTCCTGGCCAAAACCTGGGACGATGTCGTTaGGGACATGGAACACAGCGCCGAACTCAAGTTTCCATTCTCGTC | + |
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Preference number: 5 (lower is better) Translates to: DASPSFPGQNLGRCR*GHGTQRRTQVSILV Trigger: GACGAGAATGGAAACTTGAGTTCGGCGCTGTGTTCCATGTCCCCAACGACATCGTCCCAGGTTTTGGCCAGGAAAAGACGGAGAGGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS CCA 90 bp | AACTCAAGTTTCCATTCTCGTCCGCGCTCTCCTTTTCCACCTCGATaGTCTCGTCCAGCTCACTATCTGAGGAGCTGTAGTCTGGGTGAG | + |
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Preference number: 5 (lower is better) Translates to: NSSFHSRPRSPFPPR*SRPAHYLRSCSLGE Trigger: CTCACCCAGACTACAGCTCCTCAGATAGTGAGCTGGACGAGACCATCGAGGTGGAAAAGGAGAGCGCGGACGAGAATGGAAACTTGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS-3UTR CAA 90 bp | GTTGTGTTTCACAGGCACCAAGCTACTTTCAGACTCCGATCGCTTACGCAGGTCTCAGACAAACTGTTATaGATTCGGTCTCGTCGGCGC | + |
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Preference number: 5 (lower is better) Translates to: VVFHRHQATFRLRSLTQVSDKLL*IRSRRR Trigger: GCGCCGACGAGACCGAATCAATAACAGTTTGTCTGA...GACCTGCGTAAGCGATCGGAGTCTGAAAGTAGCTTGGTGCCTGTGAAACACAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS-3UTR CAA 90 bp | CACAACACATCAATACAACAGAGGTCAAACCTAGTTCAGAGGAGCTGTTCAAATAGCGGTGGAGACAGTTaGGAGGCCGAGGTCACCACG | + |
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Preference number: 5 (lower is better) Translates to: HNTSIQQRSNLVQRSCSNSGGDS*EAEVTT Trigger: CGTGGTGACCTCGGCCTCCAAACTGTCTCCACCGCT...ATTTGAACAGCTCCTCTGAACTAGGTTTGACCTCTGTTGTATTGATGTGTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS-3UTR CAA 90 bp | CACAACACATCAATACAACAGAGGTCAAACCTAGTTCAGAGGAGCTGTTCAAATCCTGGGACGATGTCGTaGGGGACATGGAACACAGCG | + |
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Preference number: 5 (lower is better) Translates to: HNTSIQQRSNLVQRSCSNPGTMS*GTWNTA Trigger: CGCTGTGTTCCATGTCCCCAACGACATCGTCCCAGG...ATTTGAACAGCTCCTCTGAACTAGGTTTGACCTCTGTTGTATTGATGTGTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS-3UTR CAA 90 bp | TGCTTTTTATTTAGTCACAACACATCAATACAACAGAGGTCAAACCTAGTTCAGAGGGCTTGCCAAGGTTaGCTGCCTGCGTGGGTGTCG | + |
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Preference number: 5 (lower is better) Translates to: CFLFSHNTSIQQRSNLVQRACQG*LPAWVS Trigger: CGACACCCACGCAGGCAGCAAACCTTGGCAAGCCCT...CTGAACTAGGTTTGACCTCTGTTGTATTGATGTGTTGTGACTAAATAAAAAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS GCA 72 bp | TGCCCTGGTGATGCGGCTCCGTGGGTGACGCCGCGGTaGCAGCGTTCCCGTGGCCATTCTGGGGCAGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: CPGDAAPWVTPR*QRSRGHSGAAA Trigger: TGCTGCTGCCCCAGAATGGCCACGGGAACGCTGGCACCGCGGCGTCACCCACGGAGCCGCATCACCAGGGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS CCA 72 bp | GGCTCCGTGGGTGACGCCGCGGTGCCAGCGTTCCCGTaGCCATTCTGGGGCAGCAGCAGAGGGTGTGCGATG | + |
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Preference number: 6 (lower is better) Translates to: GSVGDAAVPAFP*PFWGSSRGCAM Trigger: CATCGCACACCCTCTGCTGCTGCCCCAGAATGGCCACGGGAACGCTGGCACCGCGGCGTCACCCACGGAGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS TCA 72 bp | CGCCGCTCGCGGCTTCCCGCTGGGATGCGTAGTTGTTaGGATGGGAGACCAGGCGAACGCGAAGCGGGTCGG | + |
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Preference number: 6 (lower is better) Translates to: RRSRLPAGMRSC*DGRPGEREAGR Trigger: CCGACCCGCTTCGCGTTCGCCTGGTCTCCCATCTCAACAACTACGCATCCCAGCGGGAAGCCGCGAGCGGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS CCA 72 bp | GCGAGGCCACAGAGGAGAGCAGCGGTGGAGACAGTTTaGAGGCCGAGGTCACCACGGGAAGCACCGGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: ARPQRRAAVETV*RPRSPREAPVP Trigger: TGGGACCGGTGCTTCCCGTGGTGACCTCGGCCTCCAAACTGTCTCCACCGCTGCTCTCCTCTGTGGCCTCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS CAA 72 bp | AGCGAGGCCACAGAGGAGAGCAGCGGTGGAGACAGTTaGGAGGCCGAGGTCACCACGGGAAGCACCGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: SEATEESSGGDS*EAEVTTGSTGP Trigger: GGGACCGGTGCTTCCCGTGGTGACCTCGGCCTCCAAACTGTCTCCACCGCTGCTCTCCTCTGTGGCCTCGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS CAA 90 bp | AAGGCTGAGAGCGAGGCCACAGAGGAGAGCAGCGGTGGAGACAGTTaGGAGGCCGAGGTCACCACGGGAAGCACCGGTCCCAAGCCGCCA | + |
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Preference number: 6 (lower is better) Translates to: KAESEATEESSGGDS*EAEVTTGSTGPKPP Trigger: TGGCGGCTTGGGACCGGTGCTTCCCGTGGTGACCTCGGCCTCCAAACTGTCTCCACCGCTGCTCTCCTCTGTGGCCTCGCTCTCAGCCTT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS GCA 72 bp | AAGCTCCGATCTCTGTCCCCCAAGGTCTATAGGGCTTaGCAAGGTTTGCTGCCTGCGTGGGTGTCGAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: KLRSLSPKVYRA*QGLLPAWVSKG Trigger: GCCCTTCGACACCCACGCAGGCAGCAAACCTTGGCAAGCCCTATAGACCTTGGGGGACAGAGATCGGAGCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS CAA 90 bp | AAGCTCCGATCTCTGTCCCCCAAGGTCTATAGGGCTTGCCAAGGTTaGCTGCCTGCGTGGGTGTCGAAGGGCTCAGTAGGTGGAAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: KLRSLSPKVYRACQG*LPAWVSKGSVGGRS Trigger: GCTCCTTCCACCTACTGAGCCCTTCGACACCCACGCAGGCAGCAAACCTTGGCAAGCCCTATAGACCTTGGGGGACAGAGATCGGAGCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS CAA 72 bp | TCTCTGTCCCCCAAGGTCTATAGGGCTTGCCAAGGTTaGCTGCCTGCGTGGGTGTCGAAGGGCTCAGTAGGT | + |
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Preference number: 6 (lower is better) Translates to: SLSPKVYRACQG*LPAWVSKGSVG Trigger: ACCTACTGAGCCCTTCGACACCCACGCAGGCAGCAAACCTTGGCAAGCCCTATAGACCTTGGGGGACAGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS TCA 72 bp | GAACGCGAAGCGGGTCGGAGGCATCGAGTCCTTCAATaGTGCTCAGATAACGGGCAACTTCGGCCAGGCATT | + |
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Preference number: 6 (lower is better) Translates to: EREAGRRHRVLQ*CSDNGQLRPGI Trigger: AATGCCTGGCCGAAGTTGCCCGTTATCTGAGCATCATTGAAGGACTCGATGCCTCCGACCCGCTTCGCGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS CCA 72 bp | CCGTCTTTTCCTGGCCAAAACCTGGGACGATGTCGTTaGGGACATGGAACACAGCGCCGAACTCAAGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: PSFPGQNLGRCR*GHGTQRRTQVS Trigger: GGAAACTTGAGTTCGGCGCTGTGTTCCATGTCCCCAACGACATCGTCCCAGGTTTTGGCCAGGAAAAGACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS CCA 72 bp | TTCCATTCTCGTCCGCGCTCTCCTTTTCCACCTCGATaGTCTCGTCCAGCTCACTATCTGAGGAGCTGTAGT | + |
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Preference number: 6 (lower is better) Translates to: FHSRPRSPFPPR*SRPAHYLRSCS Trigger: ACTACAGCTCCTCAGATAGTGAGCTGGACGAGACCATCGAGGTGGAAAAGGAGAGCGCGGACGAGAATGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS CCA 72 bp | TCCTGGCCAAAACCTGGGACGATGTCGTTGGGGACATaGAACACAGCGCCGAACTCAAGTTTCCATTCTCGT | + |
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Preference number: 6 (lower is better) Translates to: SWPKPGTMSLGT*NTAPNSSFHSR Trigger: ACGAGAATGGAAACTTGAGTTCGGCGCTGTGTTCCATGTCCCCAACGACATCGTCCCAGGTTTTGGCCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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| CDS CAA 90 bp | TCAAAGGCACTGGGTACCAGCCTTCTCAGCTCAGACAAACTGTTATaGATTCGGTCTCGTCGGCGCTTCTCGATGATGCCTCTCCGTCTT | + |
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Preference number: 6 (lower is better) Translates to: SKALGTSLLSSDKLL*IRSRRRFSMMPLRL Trigger: AAGACGGAGAGGCATCATCGAGAAGCGCCGACGAGACCGAATCAATAACAGTTTGTCTGAGCTGAGAAGGCTGGTACCCAGTGCCTTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042412.5 |
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