Pregenerated sensors for HEXIM2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043372Ensembl transcript IDs: ENSMUST00000062530.5, ENSMUST00000107037.8, ENSMUST00000124928.2, ENSMUST00000130341.2, ENSMUST00000150275.8
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGCAGAGTGAGTGGTGCCCATCTGCAATCCCACATCTGGGGAAGTaGAGGAAGATCAGGCAGGCTAGCCTCAGCTATCTGAAACTCCTC | + |
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Preference number: 1 (lower is better) Translates to: GQSEWCPSAIPHLGK*RKIRQASLSYLKLL Trigger: GAGGAGTTTCAGATAGCTGAGGCTAGCCTGCCTGATCTTCCTTCACTTCCCCAGATGTGGGATTGCAGATGGGCACCACTCACTCTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062530.5 |
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| 3UTR TCA 90 bp | GCAGATAGATGGAGGAAACCAAACTGCAGTCCTCTAAGAGAACAGTaGGGTCGGTCTCTTCACCCTGACCCATCACCTCTCAGCTCTGGC | + |
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Preference number: 1 (lower is better) Translates to: ADRWRKPNCSPLREQ*GRSLHPDPSPLSSG Trigger: GCCAGAGCTGAGAGGTGATGGGTCAGGGTGAAGAGACCGACCTCACTGTTCTCTTAGAGGACTGCAGTTTGGTTTCCTCCATCTATCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062530.5 |
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| 3UTR-3UTR CCA 90 bp | CCTTCTCTTCCAGAGGACCCAGGTAGAGTTGCCAGCACCCACAGGGCAGCTAACTCCAAAGGTCTCTTCTaGCCTCTGCACATGTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: PSLPEDPGRVASTHRAANSKGLF*PLHMWC Trigger: GCACCACATGTGCAGAGGCCAGAAGAGACCTTTGGA...GTTAGCTGCCCTGTGGGTGCTGGCAACTCTACCTGGGTCCTCTGGAAGAGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062530.5 |
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| 3UTR-3UTR GCA 90 bp | CCAGGTAGAGTTGCCAGCACCCACAGGGCAGCTAACAACTGTCTGCAACTCCAGGTCTCTTCTGGCCTCTaGACATGTGGTGCACAGTAC | + |
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Preference number: 2 (lower is better) Translates to: PGRVASTHRAANNCLQLQVSSGL*TCGAQY Trigger: GTACTGTGCACCACATGTGCAGAGGCCAGAAGAGAC...CTGGAGTTGCAGACAGTTGTTAGCTGCCCTGTGGGTGCTGGCAACTCTACCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062530.5 |
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| 3UTR-3UTR CCA 90 bp | CACGAAGCCCTGTGTTTGAGCCACAGCATGACACAAGCCGGGCAGAGTGAGTGGCTGCAATCCCACATCTaGGGAAGTGAAGGAAGATCA | + |
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Preference number: 2 (lower is better) Translates to: HEALCLSHSMTQAGQSEWLQSHI*GSEGRS Trigger: TGATCTTCCTTCACTTCCCCAGATGTGGGATTGCAG...CCACTCACTCTGCCCGGCTTGTGTCATGCTGTGGCTCAAACACAGGGCTTCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062530.5 |
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| 3UTR CCA 72 bp | TCTCTTCACCCTGACCCATCACCTCTCAGCTCTGGCTaGAGACGTGCTGCTGCAGTTGCCAGAGCTCTTGCT | + |
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Preference number: 3 (lower is better) Translates to: SLHPDPSPLSSG*RRAAAVARALA Trigger: AGCAAGAGCTCTGGCAACTGCAGCAGCACGTCTCCAGCCAGAGCTGAGAGGTGATGGGTCAGGGTGAAGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062530.5 |
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| 3UTR TCA 72 bp | GTGTTTGAGCCACAGCATGACACAAGCCGGGCAGAGTaGGTGGTGCCCATCTGCAATCCCACATCTGGGGAA | + |
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Preference number: 3 (lower is better) Translates to: VFEPQHDTSRAE*VVPICNPTSGE Trigger: TTCCCCAGATGTGGGATTGCAGATGGGCACCACTCACTCTGCCCGGCTTGTGTCATGCTGTGGCTCAAACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062530.5 |
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| 3UTR TCA 72 bp | TCCTCTAAGAGAACAGTGAGGTCGGTCTCTTCACCCTaGCCCATCACCTCTCAGCTCTGGCTGGAGACGTGC | + |
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Preference number: 3 (lower is better) Translates to: SSKRTVRSVSSP*PITSQLWLETC Trigger: GCACGTCTCCAGCCAGAGCTGAGAGGTGATGGGTCAGGGTGAAGAGACCGACCTCACTGTTCTCTTAGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062530.5 |
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| 3UTR CCA 72 bp | GGCAGAGTGAGTGGTGCCCATCTGCAATCCCACATCTaGGGAAGTGAAGGAAGATCAGGCAGGCTAGCCTCA | + |
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Preference number: 3 (lower is better) Translates to: GRVSGAHLQSHI*GSEGRSGRLAS Trigger: TGAGGCTAGCCTGCCTGATCTTCCTTCACTTCCCCAGATGTGGGATTGCAGATGGGCACCACTCACTCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062530.5 |
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| 3UTR TCA 72 bp | GAGTGGTGCCCATCTGCAATCCCACATCTGGGGAAGTaGAGGAAGATCAGGCAGGCTAGCCTCAGCTATCTG | + |
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Preference number: 3 (lower is better) Translates to: EWCPSAIPHLGK*RKIRQASLSYL Trigger: CAGATAGCTGAGGCTAGCCTGCCTGATCTTCCTTCACTTCCCCAGATGTGGGATTGCAGATGGGCACCACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062530.5 |
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| 3UTR CCA 72 bp | GCAGTTACACACAGTTGTGAGTCACCTGCAGATAGATaGAGGAAACCAAACTGCAGTCCTCTAAGAGAACAG | + |
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Preference number: 3 (lower is better) Translates to: AVTHSCESPADR*RKPNCSPLREQ Trigger: CTGTTCTCTTAGAGGACTGCAGTTTGGTTTCCTCCATCTATCTGCAGGTGACTCACAACTGTGTGTAACTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062530.5 |
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| 3UTR TCA 72 bp | AGTGAAGGAAGATCAGGCAGGCTAGCCTCAGCTATCTaGAACTCCTCCAGAATACAAAGAAACTTTAGAAAA | + |
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Preference number: 3 (lower is better) Translates to: SEGRSGRLASAI*NSSRIQRNFRK Trigger: TTTTCTAAAGTTTCTTTGTATTCTGGAGGAGTTTCAGATAGCTGAGGCTAGCCTGCCTGATCTTCCTTCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062530.5 |
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| CDS-3UTR GCA 90 bp | GCCCTGTGTTTGAGCCACAGCATGACACAAGCCGGGCAGAGTGAGTGGTGCCCACCAGCTCCTGCTTGCTaGGGCCCTGAAGGCTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: ALCLSHSMTQAGQSEWCPPAPAC*GPEGSQ Trigger: CTGAGAGCCTTCAGGGCCGCAGCAAGCAGGAGCTGG...TGGGCACCACTCACTCTGCCCGGCTTGTGTCATGCTGTGGCTCAAACACAGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062530.5 |
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| CDS-3UTR GCA 90 bp | AACTCCAGTCCCAAGGGGATCCAAAGGTCTCTTCTGGCCTCTGCACATGTGGTGGCCGCCAGTGCCGCTTaGGCTTCGATGGCCGCCTAC | + |
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Preference number: 4 (lower is better) Translates to: NSSPKGIQRSLLASAHVVAASAA*ASMAAY Trigger: GTAGGCGGCCATCGAAGCGCAAGCGGCACTGGCGGC...CACCACATGTGCAGAGGCCAGAAGAGACCTTTGGATCCCCTTGGGACTGGAGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062530.5 |
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| CDS-3UTR GCA 90 bp | GCCCTGTGTTTGAGCCACAGCATGACACAAGCCGGGCAGAGTGAGTGGTGCCCAAGCCTCCGAGTTTCCTaGTCAGCCTGTGACAGACGC | + |
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Preference number: 4 (lower is better) Translates to: ALCLSHSMTQAGQSEWCPSLRVS*SACDRR Trigger: GCGTCTGTCACAGGCTGAGCAGGAAACTCGGAGGCT...TGGGCACCACTCACTCTGCCCGGCTTGTGTCATGCTGTGGCTCAAACACAGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062530.5 |
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| CDS-3UTR GCA 90 bp | AAGCCGGGCAGAGTGAGTGGTGCCCATCTGCAATCCCACATCTGGGGAAGTGAAGAGCAACCCTGCAGCTaGCGGAGCCTCCGAGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: KPGRVSGAHLQSHIWGSEEQPCS*RSLRVS Trigger: GGAAACTCGGAGGCTCCGGCAGCTGCAGGGTTGCTC...TTCACTTCCCCAGATGTGGGATTGCAGATGGGCACCACTCACTCTGCCCGGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062530.5 |
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| CDS-3UTR GCA 90 bp | AACTCCAGTCCCAAGGGGATCCAAAGGTCTCTTCTGGCCTCTGCACATGTGGTGCTGCTGGAGCAACCCTaGAGCTGCCGGAGCCTCCGA | + |
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Preference number: 4 (lower is better) Translates to: NSSPKGIQRSLLASAHVVLLEQP*SCRSLR Trigger: TCGGAGGCTCCGGCAGCTGCAGGGTTGCTCCAGCAG...CACCACATGTGCAGAGGCCAGAAGAGACCTTTGGATCCCCTTGGGACTGGAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062530.5 |
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| CDS-3UTR TCA 90 bp | CCAGTCCCAAGGGGATCCAAAGGTCTCTTCTGGCCTCTGCACATGTGGTGCACATGCTTGCTGCGGCCCTaGAGGCTCTCAGTGTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: PVPRGSKGLFWPLHMWCTCLLRP*RLSVWY Trigger: GTACCACACTGAGAGCCTTCAGGGCCGCAGCAAGCA...TGTGCACCACATGTGCAGAGGCCAGAAGAGACCTTTGGATCCCCTTGGGACTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062530.5 |
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| CDS-3UTR TCA 90 bp | CCAGGTAGAGTTGCCAGCACCCACAGGGCAGCTAACAACTGTCTGCAACTCCAGAGCTCTTCCACCTGTTaGCAGGGTTGCCTGCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: PGRVASTHRAANNCLQLQSSSTC*QGCLLE Trigger: CTCCAGCAGGCAACCCTGTCAACAGGTGGAAGAGCT...CTGGAGTTGCAGACAGTTGTTAGCTGCCCTGTGGGTGCTGGCAACTCTACCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062530.5 |
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| CDS-3UTR CCA 90 bp | AAGCCGGGCAGAGTGAGTGGTGCCCATCTGCAATCCCACATCTGGGGAAGTGAACCAGGGGCTGACCTTTaGCGAACATCTCCTCACGGA | + |
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Preference number: 4 (lower is better) Translates to: KPGRVSGAHLQSHIWGSEPGADL*RTSPHG Trigger: TCCGTGAGGAGATGTTCGCCAAAGGTCAGCCCCTGG...TTCACTTCCCCAGATGTGGGATTGCAGATGGGCACCACTCACTCTGCCCGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062530.5 |
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| 3UTR CAA 72 bp | CTGGCTGGAGACGTGCTGCTGCAGTTGCCAGAGCTCTaGCTTAGCATCCACGAAGCCCTGTGTTTGAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LAGDVLLQLPEL*LSIHEALCLSH Trigger: GTGGCTCAAACACAGGGCTTCGTGGATGCTAAGCAAGAGCTCTGGCAACTGCAGCAGCACGTCTCCAGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062530.5 |
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| CDS-3UTR CCA 90 bp | AATGGCAGGGGAAACTCTGACCTTGTCTTAGCAGTTCTCAGTGGAGACAGGGAGGACAGGGTTGCCTGCTaGAGCAACCCTGCAGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: NGRGNSDLVLAVLSGDREDRVAC*SNPAAA Trigger: GGCAGCTGCAGGGTTGCTCCAGCAGGCAACCCTGTC...CTCCCTGTCTCCACTGAGAACTGCTAAGACAAGGTCAGAGTTTCCCCTGCCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 |
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| 3UTR CAA 72 bp | CCAGAGCTCTTGCTTAGCATCCACGAAGCCCTGTGTTaGAGCCACAGCATGACACAAGCCGGGCAGAGTGAG | + |
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Preference number: 4 (lower is better) Translates to: PELLLSIHEALC*SHSMTQAGQSE Trigger: CTCACTCTGCCCGGCTTGTGTCATGCTGTGGCTCAAACACAGGGCTTCGTGGATGCTAAGCAAGAGCTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062530.5 |
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| CDS-3UTR TCA 90 bp | CCTTCTCTTCCAGAGGACCCAGGTAGAGTTGCCAGCACCCACAGGGCAGCTAACGGTCACGATCATTCATaGGGAACTGGGTGGTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: PSLPEDPGRVASTHRAANGHDHS*GTGWCC Trigger: ACAACACCACCCAGTTCCTCATGAATGATCGTGACC...GTTAGCTGCCCTGTGGGTGCTGGCAACTCTACCTGGGTCCTCTGGAAGAGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062530.5 |
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| CDS-3UTR TCA 90 bp | AATGGCAGGGGAAACTCTGACCTTGTCTTAGCAGTTCTCAGTGGAGACAGGGAGCCAAGGGGTCCCTTCTaGGGCTGGTTTCTCCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: NGRGNSDLVLAVLSGDREPRGPF*GWFLLV Trigger: GACCAGGAGAAACCAGCCTCAGAAGGGACCCCTTGG...CTCCCTGTCTCCACTGAGAACTGCTAAGACAAGGTCAGAGTTTCCCCTGCCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 |
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| CDS-3UTR GCA 90 bp | TGTGACAAGAGGTCAAAAGAGGACACGAGATCCTCAGGAGCTGCAGTTACACACGATGGCCGCCTACGGTaGTTCTTTCGGGCCAGCACC | + |
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Preference number: 4 (lower is better) Translates to: CDKRSKEDTRSSGAAVTHDGRLR*FFRAST Trigger: GGTGCTGGCCCGAAAGAAGCACCGTAGGCGGCCATC...GTGTGTAACTGCAGCTCCTGAGGATCTCGTGTCCTCTTTTGACCTCTTGTCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062530.5 |
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| CDS-3UTR TCA 90 bp | AATGGCAGGGGAAACTCTGACCTTGTCTTAGCAGTTCTCAGTGGAGACAGGGAGGAGAAGTCCCTCTGCTaGAATTCCCCATGGGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: NGRGNSDLVLAVLSGDREEKSLC*NSPWAR Trigger: CCGAGCCCATGGGGAATTTCAGCAGAGGGACTTCTC...CTCCCTGTCTCCACTGAGAACTGCTAAGACAAGGTCAGAGTTTCCCCTGCCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 |
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| CDS-3UTR TCA 90 bp | CTCTTGCTTAGCATCCACGAAGCCCTGTGTTTGAGCCACAGCATGACACAAGCCGCTGGTTTTCAGTTCTaGGCCTCTCCACCTCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: LLLSIHEALCLSHSMTQAAGFQF*ASPPQQ Trigger: CTGCTGAGGTGGAGAGGCTCAGAACTGAAAACCAGC...GGCTTGTGTCATGCTGTGGCTCAAACACAGGGCTTCGTGGATGCTAAGCAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062530.5 |
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| CDS-3UTR TCA 90 bp | CTCTTGCTTAGCATCCACGAAGCCCTGTGTTTGAGCCACAGCATGACACAAGCCCACATCTCGTTCTCCTaGCGCAGCCGCTGGTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: LLLSIHEALCLSHSMTQAHISFS*RSRWFS Trigger: TGAAAACCAGCGGCTGCGTCAGGAGAACGAGATGTG...GGCTTGTGTCATGCTGTGGCTCAAACACAGGGCTTCGTGGATGCTAAGCAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062530.5 |
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| CDS-3UTR CCA 90 bp | AAGCCGGGCAGAGTGAGTGGTGCCCATCTGCAATCCCACATCTGGGGAAGTGAACCTTCATCCTCTGATTaGATCTCCTGTCCTGATGGC | + |
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Preference number: 4 (lower is better) Translates to: KPGRVSGAHLQSHIWGSEPSSSD*ISCPDG Trigger: GCCATCAGGACAGGAGATCCAATCAGAGGATGAAGG...TTCACTTCCCCAGATGTGGGATTGCAGATGGGCACCACTCACTCTGCCCGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062530.5 |
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| CDS-3UTR CCA 90 bp | TGTGACAAGAGGTCAAAAGAGGACACGAGATCCTCAGGAGCTGCAGTTACACACCCGCTTGCGCTTCGATaGCCGCCTACGGTGCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: CDKRSKEDTRSSGAAVTHPLALR*PPTVLL Trigger: AAGAAGCACCGTAGGCGGCCATCGAAGCGCAAGCGG...GTGTGTAACTGCAGCTCCTGAGGATCTCGTGTCCTCTTTTGACCTCTTGTCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062530.5 |
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| CDS-3UTR TCA 90 bp | AGATCCAACCATGAAAATGGCAGGGGAAACTCTGACCTTGTCTTAGCAGTTCTCTCACCTGCCTCCCTATaGCCCAGCTGGCCTGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: RSNHENGRGNSDLVLAVLSPASL*PSWPVW Trigger: CCACACAGGCCAGCTGGGTCATAGGGAGGCAGGTGA...GAGAACTGCTAAGACAAGGTCAGAGTTTCCCCTGCCATTTTCATGGTTGGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 |
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| CDS-3UTR CCA 90 bp | AGATCCAACCATGAAAATGGCAGGGGAAACTCTGACCTTGTCTTAGCAGTTCTCGACAGGGTTGCCTGCTaGAGCAACCCTGCAGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: RSNHENGRGNSDLVLAVLDRVAC*SNPAAA Trigger: GGCAGCTGCAGGGTTGCTCCAGCAGGCAACCCTGTC...GAGAACTGCTAAGACAAGGTCAGAGTTTCCCCTGCCATTTTCATGGTTGGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 |
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| CDS-3UTR TCA 90 bp | TGTGACAAGAGGTCAAAAGAGGACACGAGATCCTCAGGAGCTGCAGTTACACACTTGGATCTCCTGTCCTaGTGGCAGAAGCTGGGAACC | + |
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Preference number: 4 (lower is better) Translates to: CDKRSKEDTRSSGAAVTHLDLLS*WQKLGT Trigger: GGTTCCCAGCTTCTGCCATCAGGACAGGAGATCCAA...GTGTGTAACTGCAGCTCCTGAGGATCTCGTGTCCTCTTTTGACCTCTTGTCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062530.5 |
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| CDS-3UTR GCA 90 bp | AAGTTAGATGACATTAAAGATCCAACCATGAAAATGGCAGGGGAAACTCTGACCGCCGCCAGTGCCGCTTaGGCTTCGATGGCCGCCTAC | + |
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Preference number: 4 (lower is better) Translates to: KLDDIKDPTMKMAGETLTAASAA*ASMAAY Trigger: GTAGGCGGCCATCGAAGCGCAAGCGGCACTGGCGGC...GGTCAGAGTTTCCCCTGCCATTTTCATGGTTGGATCTTTAATGTCATCTAACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 |
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| CDS-3UTR TCA 90 bp | GATGACATTAAAGATCCAACCATGAAAATGGCAGGGGAAACTCTGACCTTGTCTTCACCTGCCTCCCTATaGCCCAGCTGGCCTGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: DDIKDPTMKMAGETLTLSSPASL*PSWPVW Trigger: CCACACAGGCCAGCTGGGTCATAGGGAGGCAGGTGA...AGACAAGGTCAGAGTTTCCCCTGCCATTTTCATGGTTGGATCTTTAATGTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 |
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| CDS-3UTR GCA 90 bp | GATGACATTAAAGATCCAACCATGAAAATGGCAGGGGAAACTCTGACCTTGTCTCCAGCTCCTGCTTGCTaGGGCCCTGAAGGCTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: DDIKDPTMKMAGETLTLSPAPAC*GPEGSQ Trigger: CTGAGAGCCTTCAGGGCCGCAGCAAGCAGGAGCTGG...AGACAAGGTCAGAGTTTCCCCTGCCATTTTCATGGTTGGATCTTTAATGTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 |
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| CDS-3UTR GCA 90 bp | GATGACATTAAAGATCCAACCATGAAAATGGCAGGGGAAACTCTGACCTTGTCTGCACCAGCTCCTGCTTaGTGCGGCCCTGAAGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: DDIKDPTMKMAGETLTLSAPAPA*CGPEGS Trigger: AGAGCCTTCAGGGCCGCAGCAAGCAGGAGCTGGTGC...AGACAAGGTCAGAGTTTCCCCTGCCATTTTCATGGTTGGATCTTTAATGTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 |
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| CDS-3UTR GCA 90 bp | AGATCCAACCATGAAAATGGCAGGGGAAACTCTGACCTTGTCTTAGCAGTTCTCAGCCTCCGAGTTTCCTaGTCAGCCTGTGACAGACGC | + |
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Preference number: 4 (lower is better) Translates to: RSNHENGRGNSDLVLAVLSLRVS*SACDRR Trigger: GCGTCTGTCACAGGCTGAGCAGGAAACTCGGAGGCT...GAGAACTGCTAAGACAAGGTCAGAGTTTCCCCTGCCATTTTCATGGTTGGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 |
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| CDS-3UTR GCA 90 bp | GATGACATTAAAGATCCAACCATGAAAATGGCAGGGGAAACTCTGACCTTGTCTGAGCAACCCTGCAGCTaGCGGAGCCTCCGAGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: DDIKDPTMKMAGETLTLSEQPCS*RSLRVS Trigger: GGAAACTCGGAGGCTCCGGCAGCTGCAGGGTTGCTC...AGACAAGGTCAGAGTTTCCCCTGCCATTTTCATGGTTGGATCTTTAATGTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 |
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| CDS-3UTR TCA 90 bp | AGATCCAACCATGAAAATGGCAGGGGAAACTCTGACCTTGTCTTAGCAGTTCTCTTGGATCTCCTGTCCTaGTGGCAGAAGCTGGGAACC | + |
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Preference number: 4 (lower is better) Translates to: RSNHENGRGNSDLVLAVLLDLLS*WQKLGT Trigger: GGTTCCCAGCTTCTGCCATCAGGACAGGAGATCCAA...GAGAACTGCTAAGACAAGGTCAGAGTTTCCCCTGCCATTTTCATGGTTGGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 |
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| CDS-3UTR TCA 90 bp | GATGACATTAAAGATCCAACCATGAAAATGGCAGGGGAAACTCTGACCTTGTCTCCAAGGGGTCCCTTCTaGGGCTGGTTTCTCCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: DDIKDPTMKMAGETLTLSPRGPF*GWFLLV Trigger: GACCAGGAGAAACCAGCCTCAGAAGGGACCCCTTGG...AGACAAGGTCAGAGTTTCCCCTGCCATTTTCATGGTTGGATCTTTAATGTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 |
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| CDS-3UTR GCA 90 bp | AAGTTAGATGACATTAAAGATCCAACCATGAAAATGGCAGGGGAAACTCTGACCGCACCAGCTCCTGCTTaGTGCGGCCCTGAAGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: KLDDIKDPTMKMAGETLTAPAPA*CGPEGS Trigger: AGAGCCTTCAGGGCCGCAGCAAGCAGGAGCTGGTGC...GGTCAGAGTTTCCCCTGCCATTTTCATGGTTGGATCTTTAATGTCATCTAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 |
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| CDS-3UTR CCA 90 bp | TGTGACAAGAGGTCAAAAGAGGACACGAGATCCTCAGGAGCTGCAGTTACACACACGCTGTGTTGCAGTTaGTATGGTTCACAGTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: CDKRSKEDTRSSGAAVTHTLCCS*YGSQWP Trigger: TGGCCACTGTGAACCATACCAACTGCAACACAGCGT...GTGTGTAACTGCAGCTCCTGAGGATCTCGTGTCCTCTTTTGACCTCTTGTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062530.5 |
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| CDS-3UTR TCA 90 bp | TTAGATGACATTAAAGATCCAACCATGAAAATGGCAGGGGAAACTCTGACCTTGTGCTTGCTGCGGCCCTaGAGGCTCTCAGTGTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: LDDIKDPTMKMAGETLTLCLLRP*RLSVWY Trigger: GTACCACACTGAGAGCCTTCAGGGCCGCAGCAAGCA...CAAGGTCAGAGTTTCCCCTGCCATTTTCATGGTTGGATCTTTAATGTCATCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 |
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| CDS-3UTR GCA 90 bp | TTGCTGTGTAAAAAGTTAGATGACATTAAAGATCCAACCATGAAAATGGCAGGGCTGCTGGAGCAACCCTaGAGCTGCCGGAGCCTCCGA | + |
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Preference number: 4 (lower is better) Translates to: LLCKKLDDIKDPTMKMAGLLEQP*SCRSLR Trigger: TCGGAGGCTCCGGCAGCTGCAGGGTTGCTCCAGCAG...CCCTGCCATTTTCATGGTTGGATCTTTAATGTCATCTAACTTTTTACACAGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 |
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| CDS-3UTR TCA 90 bp | AAGTTAGATGACATTAAAGATCCAACCATGAAAATGGCAGGGGAAACTCTGACCAGCTCTTCCACCTGTTaGCAGGGTTGCCTGCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: KLDDIKDPTMKMAGETLTSSSTC*QGCLLE Trigger: CTCCAGCAGGCAACCCTGTCAACAGGTGGAAGAGCT...GGTCAGAGTTTCCCCTGCCATTTTCATGGTTGGATCTTTAATGTCATCTAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 |
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| CDS-3UTR GCA 90 bp | TTGCTGTGTAAAAAGTTAGATGACATTAAAGATCCAACCATGAAAATGGCAGGGGATGGCCGCCTACGGTaGTTCTTTCGGGCCAGCACC | + |
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Preference number: 4 (lower is better) Translates to: LLCKKLDDIKDPTMKMAGDGRLR*FFRAST Trigger: GGTGCTGGCCCGAAAGAAGCACCGTAGGCGGCCATC...CCCTGCCATTTTCATGGTTGGATCTTTAATGTCATCTAACTTTTTACACAGCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 |
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| CDS-3UTR TCA 90 bp | TTAGATGACATTAAAGATCCAACCATGAAAATGGCAGGGGAAACTCTGACCTTGGCTGGTTTTCAGTTCTaGGCCTCTCCACCTCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: LDDIKDPTMKMAGETLTLAGFQF*ASPPQQ Trigger: CTGCTGAGGTGGAGAGGCTCAGAACTGAAAACCAGC...CAAGGTCAGAGTTTCCCCTGCCATTTTCATGGTTGGATCTTTAATGTCATCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 |
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| CDS-3UTR TCA 90 bp | GATGACATTAAAGATCCAACCATGAAAATGGCAGGGGAAACTCTGACCTTGTCTGGTCACGATCATTCATaGGGAACTGGGTGGTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: DDIKDPTMKMAGETLTLSGHDHS*GTGWCC Trigger: ACAACACCACCCAGTTCCTCATGAATGATCGTGACC...AGACAAGGTCAGAGTTTCCCCTGCCATTTTCATGGTTGGATCTTTAATGTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 |
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| CDS-3UTR GCA 90 bp | TTGCTGTGTAAAAAGTTAGATGACATTAAAGATCCAACCATGAAAATGGCAGGGCTCTCATCTCGCTGTTaGTTCTCGGCCCAGCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: LLCKKLDDIKDPTMKMAGLSSRC*FSAQLS Trigger: GCTGAGCTGGGCCGAGAAGCAACAGCGAGATGAGAG...CCCTGCCATTTTCATGGTTGGATCTTTAATGTCATCTAACTTTTTACACAGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 |
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| CDS-3UTR CCA 90 bp | GATGACATTAAAGATCCAACCATGAAAATGGCAGGGGAAACTCTGACCTTGTCTACGCTGTGTTGCAGTTaGTATGGTTCACAGTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: DDIKDPTMKMAGETLTLSTLCCS*YGSQWP Trigger: TGGCCACTGTGAACCATACCAACTGCAACACAGCGT...AGACAAGGTCAGAGTTTCCCCTGCCATTTTCATGGTTGGATCTTTAATGTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 |
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| CDS-3UTR CCA 90 bp | GATGACATTAAAGATCCAACCATGAAAATGGCAGGGGAAACTCTGACCTTGTCTCCTTCATCCTCTGATTaGATCTCCTGTCCTGATGGC | + |
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Preference number: 4 (lower is better) Translates to: DDIKDPTMKMAGETLTLSPSSSD*ISCPDG Trigger: GCCATCAGGACAGGAGATCCAATCAGAGGATGAAGG...AGACAAGGTCAGAGTTTCCCCTGCCATTTTCATGGTTGGATCTTTAATGTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 |
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| CDS-3UTR CCA 90 bp | TTGCTGTGTAAAAAGTTAGATGACATTAAAGATCCAACCATGAAAATGGCAGGGCCAGGGGCTGACCTTTaGCGAACATCTCCTCACGGA | + |
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Preference number: 4 (lower is better) Translates to: LLCKKLDDIKDPTMKMAGPGADL*RTSPHG Trigger: TCCGTGAGGAGATGTTCGCCAAAGGTCAGCCCCTGG...CCCTGCCATTTTCATGGTTGGATCTTTAATGTCATCTAACTTTTTACACAGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 |
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| CDS-3UTR TCA 90 bp | TTGCTGTGTAAAAAGTTAGATGACATTAAAGATCCAACCATGAAAATGGCAGGGCACATCTCGTTCTCCTaGCGCAGCCGCTGGTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: LLCKKLDDIKDPTMKMAGHISFS*RSRWFS Trigger: TGAAAACCAGCGGCTGCGTCAGGAGAACGAGATGTG...CCCTGCCATTTTCATGGTTGGATCTTTAATGTCATCTAACTTTTTACACAGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 |
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| CDS GCA 90 bp | GCTTCTCGGCCCAGCTCAGCTCCAAGTAGGGCCGCCAGTGCCGCTTaGGCTTCGATGGCCGCCTACGGTGCTTCTTTCGGGCCAGCACCG | + |
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Preference number: 5 (lower is better) Translates to: ASRPSSAPSRAASAA*ASMAAYGASFGPAP Trigger: CGGTGCTGGCCCGAAAGAAGCACCGTAGGCGGCCATCGAAGCGCAAGCGGCACTGGCGGCCCTACTTGGAGCTGAGCTGGGCCGAGAAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 ENSMUST00000124928.2 ENSMUST00000150275.8 |
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| CDS CCA 90 bp | CCAGCTCAGCTCCAAGTAGGGCCGCCAGTGCCGCTTGCGCTTCGATaGCCGCCTACGGTGCTTCTTTCGGGCCAGCACCGCCTCCACCGA | + |
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Preference number: 5 (lower is better) Translates to: PAQLQVGPPVPLALR*PPTVLLSGQHRLHR Trigger: TCGGTGGAGGCGGTGCTGGCCCGAAAGAAGCACCGTAGGCGGCCATCGAAGCGCAAGCGGCACTGGCGGCCCTACTTGGAGCTGAGCTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 ENSMUST00000124928.2 ENSMUST00000150275.8 |
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| CDS CCA 90 bp | CCACCTCAGCAGCCAGCTCTTCCACCTGTTGACAGGGTTGCCTGCTaGAGCAACCCTGCAGCTGCCGGAGCCTCCGAGTTTCCTGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: PPQQPALPPVDRVAC*SNPAAAGASEFPAQ Trigger: CTGAGCAGGAAACTCGGAGGCTCCGGCAGCTGCAGGGTTGCTCCAGCAGGCAACCCTGTCAACAGGTGGAAGAGCTGGCTGCTGAGGTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 |
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| CDS-3UTR CAA 90 bp | AAGCCGGGCAGAGTGAGTGGTGCCCATCTGCAATCCCACATCTGGGGAAGTGAACCCATGGGCTCGGCCTaGCCCATCACTGTCCCCTGC | + |
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Preference number: 5 (lower is better) Translates to: KPGRVSGAHLQSHIWGSEPMGSA*PITVPC Trigger: GCAGGGGACAGTGATGGGCAAGGCCGAGCCCATGGG...TTCACTTCCCCAGATGTGGGATTGCAGATGGGCACCACTCACTCTGCCCGGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062530.5 |
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| CDS CCA 90 bp | GAGGCTCATGGGCTATCTGGGGGCTCCGAAGACCACCGGAAGTCTTaGCCTCCTCCAGAGCAGCTGGTGACGCTGTGTTGCAGTTGGTAT | + |
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Preference number: 5 (lower is better) Translates to: EAHGLSGGSEDHRKS*PPPEQLVTLCCSWY Trigger: ATACCAACTGCAACACAGCGTCACCAGCTGCTCTGGAGGAGGCCAAGACTTCCGGTGGTCTTCGGAGCCCCCAGATAGCCCATGAGCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 ENSMUST00000124928.2 ENSMUST00000130341.2 ENSMUST00000150275.8 |
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| CDS-3UTR CAA 90 bp | AATGGCAGGGGAAACTCTGACCTTGTCTTAGCAGTTCTCAGTGGAGACAGGGAGGGCCGCCAGTGCCGCTaGCGCTTCGATGGCCGCCTA | + |
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Preference number: 5 (lower is better) Translates to: NGRGNSDLVLAVLSGDREGRQCR*RFDGRL Trigger: TAGGCGGCCATCGAAGCGCAAGCGGCACTGGCGGCC...CTCCCTGTCTCCACTGAGAACTGCTAAGACAAGGTCAGAGTTTCCCCTGCCATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 |
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| CDS-3UTR CAA 90 bp | CACGAAGCCCTGTGTTTGAGCCACAGCATGACACAAGCCGGGCAGAGTGAGTGGAATGGGGCTTCAACCTaGGGCCAAGGGGTCCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: HEALCLSHSMTQAGQSEWNGAST*GQGVPS Trigger: AGAAGGGACCCCTTGGCCCAAGGTTGAAGCCCCATT...CCACTCACTCTGCCCGGCTTGTGTCATGCTGTGGCTCAAACACAGGGCTTCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062530.5 |
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| CDS CCA 90 bp | CAACTTGAGCCATCGCCAGCGGGGACAGTCCCTTCATCCTCTGATTaGATCTCCTGTCCTGATGGCAGAAGCTGGGAACCACCGAAGTCA | + |
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Preference number: 5 (lower is better) Translates to: QLEPSPAGTVPSSSD*ISCPDGRSWEPPKS Trigger: TGACTTCGGTGGTTCCCAGCTTCTGCCATCAGGACAGGAGATCCAATCAGAGGATGAAGGGACTGTCCCCGCTGGCGATGGCTCAAGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 ENSMUST00000124928.2 ENSMUST00000150275.8 |
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| CDS-3UTR CAA 90 bp | AATGGCAGGGGAAACTCTGACCTTGTCTTAGCAGTTCTCAGTGGAGACAGGGAGAGACCACCGGAAGTCTaGGCCTCCTCCAGAGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: NGRGNSDLVLAVLSGDRERPPEV*ASSRAA Trigger: AGCTGCTCTGGAGGAGGCCAAGACTTCCGGTGGTCT...CTCCCTGTCTCCACTGAGAACTGCTAAGACAAGGTCAGAGTTTCCCCTGCCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 |
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| CDS-3UTR CAA 90 bp | GATGACATTAAAGATCCAACCATGAAAATGGCAGGGGAAACTCTGACCTTGTCTGGCCGCCAGTGCCGCTaGCGCTTCGATGGCCGCCTA | + |
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Preference number: 5 (lower is better) Translates to: DDIKDPTMKMAGETLTLSGRQCR*RFDGRL Trigger: TAGGCGGCCATCGAAGCGCAAGCGGCACTGGCGGCC...AGACAAGGTCAGAGTTTCCCCTGCCATTTTCATGGTTGGATCTTTAATGTCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 |
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| CDS-3UTR CAA 90 bp | TTGCTGTGTAAAAAGTTAGATGACATTAAAGATCCAACCATGAAAATGGCAGGGAGACCACCGGAAGTCTaGGCCTCCTCCAGAGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: LLCKKLDDIKDPTMKMAGRPPEV*ASSRAA Trigger: AGCTGCTCTGGAGGAGGCCAAGACTTCCGGTGGTCT...CCCTGCCATTTTCATGGTTGGATCTTTAATGTCATCTAACTTTTTACACAGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 |
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| CDS-3UTR CAA 90 bp | TTGCTGTGTAAAAAGTTAGATGACATTAAAGATCCAACCATGAAAATGGCAGGGAATGGGGCTTCAACCTaGGGCCAAGGGGTCCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: LLCKKLDDIKDPTMKMAGNGAST*GQGVPS Trigger: AGAAGGGACCCCTTGGCCCAAGGTTGAAGCCCCATT...CCCTGCCATTTTCATGGTTGGATCTTTAATGTCATCTAACTTTTTACACAGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 |
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| CDS GCA 72 bp | CGCCAGTGCCGCTTGCGCTTCGATGGCCGCCTACGGTaGTTCTTTCGGGCCAGCACCGCCTCCACCGAACAG | + |
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Preference number: 6 (lower is better) Translates to: RQCRLRFDGRLR*FFRASTASTEQ Trigger: CTGTTCGGTGGAGGCGGTGCTGGCCCGAAAGAAGCACCGTAGGCGGCCATCGAAGCGCAAGCGGCACTGGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 ENSMUST00000124928.2 ENSMUST00000150275.8 |
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| CDS CCA 72 bp | CTCCAAGTAGGGCCGCCAGTGCCGCTTGCGCTTCGATaGCCGCCTACGGTGCTTCTTTCGGGCCAGCACCGC | + |
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Preference number: 6 (lower is better) Translates to: LQVGPPVPLALR*PPTVLLSGQHR Trigger: GCGGTGCTGGCCCGAAAGAAGCACCGTAGGCGGCCATCGAAGCGCAAGCGGCACTGGCGGCCCTACTTGGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 ENSMUST00000124928.2 ENSMUST00000150275.8 |
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| CDS CAA 90 bp | CTCACGGACCCGAGAGGCCCTCTGGCTCTGCCTCTCATCTCGCTGTaGCTTCTCGGCCCAGCTCAGCTCCAAGTAGGGCCGCCAGTGCCG | + |
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Preference number: 6 (lower is better) Translates to: LTDPRGPLALPLISL*LLGPAQLQVGPPVP Trigger: CGGCACTGGCGGCCCTACTTGGAGCTGAGCTGGGCCGAGAAGCAACAGCGAGATGAGAGGCAGAGCCAGAGGGCCTCTCGGGTCCGTGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 ENSMUST00000124928.2 |
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| CDS GCA 72 bp | CCCAGCTCAGCTCCAAGTAGGGCCGCCAGTGCCGCTTaGGCTTCGATGGCCGCCTACGGTGCTTCTTTCGGG | + |
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Preference number: 6 (lower is better) Translates to: PSSAPSRAASAA*ASMAAYGASFG Trigger: CCCGAAAGAAGCACCGTAGGCGGCCATCGAAGCGCAAGCGGCACTGGCGGCCCTACTTGGAGCTGAGCTGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 ENSMUST00000124928.2 ENSMUST00000150275.8 |
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| CDS GCA 72 bp | CAGCAGCCAGCTCTTCCACCTGTTGACAGGGTTGCCTaGTGGAGCAACCCTGCAGCTGCCGGAGCCTCCGAG | + |
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Preference number: 6 (lower is better) Translates to: QQPALPPVDRVA*WSNPAAAGASE Trigger: CTCGGAGGCTCCGGCAGCTGCAGGGTTGCTCCAGCAGGCAACCCTGTCAACAGGTGGAAGAGCTGGCTGCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 |
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| CDS CCA 72 bp | GGGCTATCTGGGGGCTCCGAAGACCACCGGAAGTCTTaGCCTCCTCCAGAGCAGCTGGTGACGCTGTGTTGC | + |
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Preference number: 6 (lower is better) Translates to: GLSGGSEDHRKS*PPPEQLVTLCC Trigger: GCAACACAGCGTCACCAGCTGCTCTGGAGGAGGCCAAGACTTCCGGTGGTCTTCGGAGCCCCCAGATAGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 ENSMUST00000124928.2 ENSMUST00000130341.2 ENSMUST00000150275.8 |
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| CDS GCA 72 bp | GAGCAACCCTGCAGCTGCCGGAGCCTCCGAGTTTCCTaGTCAGCCTGTGACAGACGCCTCTCTAGATCCAGG | + |
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Preference number: 6 (lower is better) Translates to: EQPCSCRSLRVS*SACDRRLSRSR Trigger: CCTGGATCTAGAGAGGCGTCTGTCACAGGCTGAGCAGGAAACTCGGAGGCTCCGGCAGCTGCAGGGTTGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 |
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| CDS CCA 72 bp | CAGCCAGCTCTTCCACCTGTTGACAGGGTTGCCTGCTaGAGCAACCCTGCAGCTGCCGGAGCCTCCGAGTTT | + |
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Preference number: 6 (lower is better) Translates to: QPALPPVDRVAC*SNPAAAGASEF Trigger: AAACTCGGAGGCTCCGGCAGCTGCAGGGTTGCTCCAGCAGGCAACCCTGTCAACAGGTGGAAGAGCTGGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 |
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| CDS CAA 72 bp | TGGGCTATCTGGGGGCTCCGAAGACCACCGGAAGTCTaGGCCTCCTCCAGAGCAGCTGGTGACGCTGTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: WAIWGLRRPPEV*ASSRAAGDAVL Trigger: CAACACAGCGTCACCAGCTGCTCTGGAGGAGGCCAAGACTTCCGGTGGTCTTCGGAGCCCCCAGATAGCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 ENSMUST00000124928.2 ENSMUST00000130341.2 ENSMUST00000150275.8 |
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| CDS CCA 72 bp | CTTTCGGGCCAGCACCGCCTCCACCGAACAGCCCCCTaGGCTCTGGGTTCGAGAACCCCTAATGTTACAACT | + |
|
Preference number: 6 (lower is better) Translates to: LSGQHRLHRTAP*ALGSRTPNVTT Trigger: AGTTGTAACATTAGGGGTTCTCGAACCCAGAGCCCAGGGGGCTGTTCGGTGGAGGCGGTGCTGGCCCGAAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 ENSMUST00000124928.2 ENSMUST00000150275.8 |
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| CDS TCA 72 bp | AAATGGGGCTTCAACCTTGGGCCAAGGGGTCCCTTCTaGGGCTGGTTTCTCCTGGTCACAGTAGCCGCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: KWGFNLGPRGPF*GWFLLVTVAAL Trigger: GAGGGCGGCTACTGTGACCAGGAGAAACCAGCCTCAGAAGGGACCCCTTGGCCCAAGGTTGAAGCCCCATTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 |
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| CDS TCA 72 bp | ACCACCGGAAGTCTTGGCCTCCTCCAGAGCAGCTGGTaGCGCTGTGTTGCAGTTGGTATGGTTCACAGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: TTGSLGLLQSSW*RCVAVGMVHSG Trigger: GCCACTGTGAACCATACCAACTGCAACACAGCGTCACCAGCTGCTCTGGAGGAGGCCAAGACTTCCGGTGGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 ENSMUST00000124928.2 ENSMUST00000130341.2 ENSMUST00000150275.8 |
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| CDS TCA 72 bp | TGTCCTGATGGCAGAAGCTGGGAACCACCGAAGTCATaGGGCTCATGGGCTATCTGGGGGCTCCGAAGACCA | + |
|
Preference number: 6 (lower is better) Translates to: CPDGRSWEPPKS*GSWAIWGLRRP Trigger: TGGTCTTCGGAGCCCCCAGATAGCCCATGAGCCTCATGACTTCGGTGGTTCCCAGCTTCTGCCATCAGGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 ENSMUST00000124928.2 ENSMUST00000130341.2 ENSMUST00000150275.8 |
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| CDS CCA 72 bp | CCATCGCCAGCGGGGACAGTCCCTTCATCCTCTGATTaGATCTCCTGTCCTGATGGCAGAAGCTGGGAACCA | + |
|
Preference number: 6 (lower is better) Translates to: PSPAGTVPSSSD*ISCPDGRSWEP Trigger: TGGTTCCCAGCTTCTGCCATCAGGACAGGAGATCCAATCAGAGGATGAAGGGACTGTCCCCGCTGGCGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 ENSMUST00000124928.2 ENSMUST00000150275.8 |
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| CDS TCA 72 bp | TGGGCTCTGGGTTCGAGAACCCCTAATGTTACAACTTaGGCCATCGCCAGCGGGGACAGTCCCTTCATCCTC | + |
|
Preference number: 6 (lower is better) Translates to: WALGSRTPNVTT*AIASGDSPFIL Trigger: GAGGATGAAGGGACTGTCCCCGCTGGCGATGGCTCAAGTTGTAACATTAGGGGTTCTCGAACCCAGAGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000062530.5 ENSMUST00000107037.8 ENSMUST00000124928.2 ENSMUST00000150275.8 |
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