Pregenerated sensors for HEXIM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048878Ensembl transcript IDs: ENSMUST00000053063.7
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTACCAGGAGCCTTACTTACCAAGGTAGGCAAACAGGAACTCCATTaGAATTTTGTGGGGTGGTTAGGACGGAAGCCAGGATTACTGAAA | + |
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Preference number: 1 (lower is better) Translates to: LPGALLTKVGKQELH*NFVGWLGRKPGLLK Trigger: TTTCAGTAATCCTGGCTTCCGTCCTAACCACCCCACAAAATTCCAATGGAGTTCCTGTTTGCCTACCTTGGTAAGTAAGGCTCCTGGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| 3UTR TCA 90 bp | TTGAAGGTCCCAAGCCGTCCTCCTGGCACAGCTTTTCTTGATTATTaGTTTGTAGCTGCATTCGTTCTTGATGTTCCAGTCAACTCCACT | + |
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Preference number: 1 (lower is better) Translates to: LKVPSRPPGTAFLDY*FVAAFVLDVPVNST Trigger: AGTGGAGTTGACTGGAACATCAAGAACGAATGCAGCTACAAATCAATAATCAAGAAAAGCTGTGCCAGGAGGACGGCTTGGGACCTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| 3UTR TCA 90 bp | ACATGCAGGGTTTGTATTCATCATCTAAAGACCTCAGCCCGCTCCTaGGCCAGCTTTACTTGTAGAAAGGGGCATTTCAAATTTCAGTTG | + |
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Preference number: 1 (lower is better) Translates to: TCRVCIHHLKTSARS*ASFTCRKGHFKFQL Trigger: CAACTGAAATTTGAAATGCCCCTTTCTACAAGTAAAGCTGGCTCAGGAGCGGGCTGAGGTCTTTAGATGATGAATACAAACCCTGCATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| 3UTR-3UTR GCA 90 bp | CTCAGAGCCTCCCTGCATTTTCAAGAGCAGCCTAACCTAGGCAGCTGTCCAGGCACCCCACCTCAAAAGTaGAGTCACACAAACCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: LRASLHFQEQPNLGSCPGTPPQK*SHTNQH Trigger: GTGCTGGTTTGTGTGACTGCACTTTTGAGGTGGGGT...GCCTGGACAGCTGCCTAGGTTAGGCTGCTCTTGAAAATGCAGGGAGGCTCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| 3UTR-3UTR CCA 90 bp | CTCAGAGCCTCCCTGCATTTTCAAGAGCAGCCTAACCTAGGCAGCTGTCCAGGCAATGGGTCTCAGATTTaGCCACCTTATAGCTCCGCT | + |
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Preference number: 2 (lower is better) Translates to: LRASLHFQEQPNLGSCPGNGSQI*PPYSSA Trigger: AGCGGAGCTATAAGGTGGCCAAATCTGAGACCCATT...GCCTGGACAGCTGCCTAGGTTAGGCTGCTCTTGAAAATGCAGGGAGGCTCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| 3UTR-3UTR CCA 90 bp | AGCCATCAAGGTGCGCAAGCTAAGCTGCTGCCTGTAGCCACTTTCTACTCCCCAACCCATTGGTGGGGGTaGAGGGAACAAACTGAATTT | + |
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Preference number: 2 (lower is better) Translates to: SHQGAQAKLLPVATFYSPTHWWG*REQTEF Trigger: AAATTCAGTTTGTTCCCTCCACCCCCACCAATGGGT...TGGGGAGTAGAAAGTGGCTACAGGCAGCAGCTTAGCTTGCGCACCTTGATGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| 3UTR-3UTR TCA 90 bp | CCTAGGCAGCTGTCCAGGCAGCCCAGGAGATTGAGAATAGCTGCAGTACTGGAAGGAAGCCAGGATTACTaGAAAATTGACTTGTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: PRQLSRQPRRLRIAAVLEGSQDY*KIDLWR Trigger: TCTCCACAAGTCAATTTTTCAGTAATCCTGGCTTCC...TTCCAGTACTGCAGCTATTCTCAATCTCCTGGGCTGCCTGGACAGCTGCCTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| 3UTR-3UTR GCA 90 bp | CTCAGAGCCTCCCTGCATTTTCAAGAGCAGCCTAACCTAGGCAGCTGTCCAGGCGCAGTACTGGAAACATaGAGGGTTTGTATTCATCAT | + |
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Preference number: 2 (lower is better) Translates to: LRASLHFQEQPNLGSCPGAVLET*RVCIHH Trigger: ATGATGAATACAAACCCTGCATGTTTCCAGTACTGC...GCCTGGACAGCTGCCTAGGTTAGGCTGCTCTTGAAAATGCAGGGAGGCTCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| 3UTR-3UTR CCA 90 bp | AGCCATCAAGGTGCGCAAGCTAAGCTGCTGCCTGTAGCCACTTTCTACTCCCCAAATTTAAAAACCCATTaGTGGGGGTGGAGGGAACAA | + |
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Preference number: 2 (lower is better) Translates to: SHQGAQAKLLPVATFYSPNLKTH*WGWREQ Trigger: TTGTTCCCTCCACCCCCACCAATGGGTTTTTAAATT...TGGGGAGTAGAAAGTGGCTACAGGCAGCAGCTTAGCTTGCGCACCTTGATGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| 3UTR-3UTR TCA 90 bp | CCTAGGCAGCTGTCCAGGCAGCCCAGGAGATTGAGAATAGCTGCAGTACTGGAAGGCGATTTTCTCTTCTaGTTATGTGTCATAAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: PRQLSRQPRRLRIAAVLEGDFLF*LCVIKR Trigger: CCTTTTTATGACACATAATCAGAAGAGAAAATCGCC...TTCCAGTACTGCAGCTATTCTCAATCTCCTGGGCTGCCTGGACAGCTGCCTAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| 3UTR-3UTR TCA 90 bp | TTATCTTGGCTATCTCTTGGATGTACTAAGAAAGCAAGTTTACCAGGAGCCTTATTGTTAGCACTCTTTTaGACAGCCATCAAGGTGCGC | + |
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Preference number: 2 (lower is better) Translates to: LSWLSLGCTKKASLPGALLLALF*TAIKVR Trigger: GCGCACCTTGATGGCTGTTCAAAAGAGTGCTAACAA...TAAGGCTCCTGGTAAACTTGCTTTCTTAGTACATCCAAGAGATAGCCAAGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| 3UTR-3UTR CCA 90 bp | AAGGGGCATTTCAAATTTCAGTTGGATTCTAATGGAAAGGGCAGCTTTTCTTTCTTAAAAACCCATTGGTaGGGGTGGAGGGAACAAACT | + |
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Preference number: 2 (lower is better) Translates to: KGHFKFQLDSNGKGSFSFLKTHW*GWREQT Trigger: AGTTTGTTCCCTCCACCCCCACCAATGGGTTTTTAA...GAAAGAAAAGCTGCCCTTTCCATTAGAATCCAACTGAAATTTGAAATGCCCCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| 3UTR-3UTR TCA 90 bp | TATCTCTTGGATGTACTAAGAAAGCAAGTTTACCAGGAGCCTTACTTACCAAGGCTTGTGGAGATGAAATaGGGCTTTTCGTTATCTAAC | + |
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Preference number: 2 (lower is better) Translates to: YLLDVLRKQVYQEPYLPRLVEMK*GFSLSN Trigger: GTTAGATAACGAAAAGCCTCATTTCATCTCCACAAG...CCTTGGTAAGTAAGGCTCCTGGTAAACTTGCTTTCTTAGTACATCCAAGAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| 3UTR-3UTR CAA 90 bp | CTCAGAGCCTCCCTGCATTTTCAAGAGCAGCCTAACCTAGGCAGCTGTCCAGGCCAAACAGGAACTCCATaGGAATTTTGTGGGGTGGTT | + |
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Preference number: 3 (lower is better) Translates to: LRASLHFQEQPNLGSCPGQTGTP*EFCGVV Trigger: AACCACCCCACAAAATTCCAATGGAGTTCCTGTTTG...GCCTGGACAGCTGCCTAGGTTAGGCTGCTCTTGAAAATGCAGGGAGGCTCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| 3UTR GCA 72 bp | GCAGCTGTCCAGGCAGCCCAGGAGATTGAGAATAGCTaGAGTACTGGAAACATGCAGGGTTTGTATTCATCA | + |
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Preference number: 3 (lower is better) Translates to: AAVQAAQEIENS*STGNMQGLYSS Trigger: TGATGAATACAAACCCTGCATGTTTCCAGTACTGCAGCTATTCTCAATCTCCTGGGCTGCCTGGACAGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| 3UTR-3UTR CAA 90 bp | CTCAGAGCCTCCCTGCATTTTCAAGAGCAGCCTAACCTAGGCAGCTGTCCAGGCTATCTTGGCTATCTCTaGGATGTACTAAGAAAGCAA | + |
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Preference number: 3 (lower is better) Translates to: LRASLHFQEQPNLGSCPGYLGYL*DVLRKQ Trigger: TTGCTTTCTTAGTACATCCAAGAGATAGCCAAGATA...GCCTGGACAGCTGCCTAGGTTAGGCTGCTCTTGAAAATGCAGGGAGGCTCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| 3UTR GCA 72 bp | CCCAGGAGATTGAGAATAGCTGCAGTACTGGAAACATaGAGGGTTTGTATTCATCATCTAAAGACCTCAGCC | + |
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Preference number: 3 (lower is better) Translates to: PRRLRIAAVLET*RVCIHHLKTSA Trigger: GGCTGAGGTCTTTAGATGATGAATACAAACCCTGCATGTTTCCAGTACTGCAGCTATTCTCAATCTCCTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| 3UTR TCA 72 bp | GTTTGTATTCATCATCTAAAGACCTCAGCCCGCTCCTaGGCCAGCTTTACTTGTAGAAAGGGGCATTTCAAA | + |
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Preference number: 3 (lower is better) Translates to: VCIHHLKTSARS*ASFTCRKGHFK Trigger: TTTGAAATGCCCCTTTCTACAAGTAAAGCTGGCTCAGGAGCGGGCTGAGGTCTTTAGATGATGAATACAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| 3UTR TCA 72 bp | TATAATTGCCCTAAGGAAACACTGACACAGGTCAGGTaGCAGGGTTGCATTAACTATACTGACATGAGAGAA | + |
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Preference number: 3 (lower is better) Translates to: YNCPKETLTQVR*QGCINYTDMRE Trigger: TTCTCTCATGTCAGTATAGTTAATGCAACCCTGTCACCTGACCTGTGTCAGTGTTTCCTTAGGGCAATTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| 3UTR-3UTR CAA 90 bp | AAGGGGCATTTCAAATTTCAGTTGGATTCTAATGGAAAGGGCAGCTTTTCTTTCTTTGTTAGCACTCTTTaGAACAGCCATCAAGGTGCG | + |
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Preference number: 3 (lower is better) Translates to: KGHFKFQLDSNGKGSFSFFVSTL*NSHQGA Trigger: CGCACCTTGATGGCTGTTCAAAAGAGTGCTAACAAA...GAAAGAAAAGCTGCCCTTTCCATTAGAATCCAACTGAAATTTGAAATGCCCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| 3UTR-3UTR CAA 90 bp | AAGGGGCATTTCAAATTTCAGTTGGATTCTAATGGAAAGGGCAGCTTTTCTTTCGAAGCAGGCACAACATaGAGTACATTTTACCTGAAC | + |
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Preference number: 3 (lower is better) Translates to: KGHFKFQLDSNGKGSFSFEAGTT*STFYLN Trigger: GTTCAGGTAAAATGTACTCAATGTTGTGCCTGCTTC...GAAAGAAAAGCTGCCCTTTCCATTAGAATCCAACTGAAATTTGAAATGCCCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| 3UTR TCA 72 bp | AATAATTTTAGCAATATAATTGCCCTAAGGAAACACTaGCACAGGTCAGGTGACAGGGTTGCATTAACTATA | + |
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Preference number: 3 (lower is better) Translates to: NNFSNIIALRKH*HRSGDRVALTI Trigger: TATAGTTAATGCAACCCTGTCACCTGACCTGTGTCAGTGTTTCCTTAGGGCAATTATATTGCTAAAATTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| CDS-3UTR GCA 90 bp | CCTAGGCAGCTGTCCAGGCAGCCCAGGAGATTGAGAATAGCTGCAGTACTGGAAGCGGCAGGAGCCTCCTaGTTGGTGGCCTCCGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: PRQLSRQPRRLRIAAVLEAAGAS*LVASES Trigger: TGACTCGGAGGCCACCAAGCAGGAGGCTCCTGCCGC...TTCCAGTACTGCAGCTATTCTCAATCTCCTGGGCTGCCTGGACAGCTGCCTAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| CDS-3UTR GCA 90 bp | CCTAGGCAGCTGTCCAGGCAGCCCAGGAGATTGAGAATAGCTGCAGTACTGGAAAATGGGGGCAGCTGGTaGTTCAGGCCCCCTTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: PRQLSRQPRRLRIAAVLENGGSW*FRPPSP Trigger: GGGAGAAGGGGGCCTGAAGCACCAGCTGCCCCCATT...TTCCAGTACTGCAGCTATTCTCAATCTCCTGGGCTGCCTGGACAGCTGCCTAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| CDS-3UTR GCA 90 bp | AGCCATCAAGGTGCGCAAGCTAAGCTGCTGCCTGTAGCCACTTTCTACTCCCCATGCCGTCCCCTCCCATaGCATCGCTGCCTCCGTCTT | + |
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Preference number: 4 (lower is better) Translates to: SHQGAQAKLLPVATFYSPCRPLP*HRCLRL Trigger: AAGACGGAGGCAGCGATGGCATGGGAGGGGACGGCA...TGGGGAGTAGAAAGTGGCTACAGGCAGCAGCTTAGCTTGCGCACCTTGATGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| CDS-3UTR CCA 90 bp | CTCAGAGCCTCCCTGCATTTTCAAGAGCAGCCTAACCTAGGCAGCTGTCCAGGCTGCAATGGGGGCAGCTaGTGCTTCAGGCCCCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LRASLHFQEQPNLGSCPGCNGGS*CFRPPS Trigger: AGAAGGGGGCCTGAAGCACCAGCTGCCCCCATTGCA...GCCTGGACAGCTGCCTAGGTTAGGCTGCTCTTGAAAATGCAGGGAGGCTCTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| CDS-3UTR GCA 90 bp | AGCCATCAAGGTGCGCAAGCTAAGCTGCTGCCTGTAGCCACTTTCTACTCCCCACCCAGCTGTCTCTGTTaGTGTCCCCATGGCTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: SHQGAQAKLLPVATFYSPPSCLC*CPHGSS Trigger: CGAGGAGCCATGGGGACAGCAACAGAGACAGCTGGG...TGGGGAGTAGAAAGTGGCTACAGGCAGCAGCTTAGCTTGCGCACCTTGATGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| CDS-3UTR GCA 90 bp | CCTAGGCAGCTGTCCAGGCAGCCCAGGAGATTGAGAATAGCTGCAGTACTGGAAGCTGCAGAAACTCGCTaGCGTCCCCTCCCATGCCAT | + |
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Preference number: 4 (lower is better) Translates to: PRQLSRQPRRLRIAAVLEAAETR*RPLPCH Trigger: ATGGCATGGGAGGGGACGGCAGCGAGTTTCTGCAGC...TTCCAGTACTGCAGCTATTCTCAATCTCCTGGGCTGCCTGGACAGCTGCCTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| CDS-3UTR GCA 90 bp | CCTAGGCAGCTGTCCAGGCAGCCCAGGAGATTGAGAATAGCTGCAGTACTGGAATCCGAGAAGTCCCGCTaGAGAAACTCGCTGCCGTCC | + |
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Preference number: 4 (lower is better) Translates to: PRQLSRQPRRLRIAAVLESEKSR*RNSLPS Trigger: GGACGGCAGCGAGTTTCTGCAGCGGGACTTCTCGGA...TTCCAGTACTGCAGCTATTCTCAATCTCCTGGGCTGCCTGGACAGCTGCCTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| CDS-3UTR TCA 90 bp | CTCAGAGCCTCCCTGCATTTTCAAGAGCAGCCTAACCTAGGCAGCTGTCCAGGCAGATCAGGCTCCTCCTaGTCGTGGTCATCCATGAGG | + |
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Preference number: 4 (lower is better) Translates to: LRASLHFQEQPNLGSCPGRSGSS*SWSSMR Trigger: CCTCATGGATGACCACGATCAGGAGGAGCCTGATCT...GCCTGGACAGCTGCCTAGGTTAGGCTGCTCTTGAAAATGCAGGGAGGCTCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| CDS-3UTR CCA 90 bp | AGCCATCAAGGTGCGCAAGCTAAGCTGCTGCCTGTAGCCACTTTCTACTCCCCACAACTGGCTGGCCCTTaGCGAACATCTCGGCTCGAA | + |
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Preference number: 4 (lower is better) Translates to: SHQGAQAKLLPVATFYSPQLAGP*RTSRLE Trigger: TTCGAGCCGAGATGTTCGCCAAGGGCCAGCCAGTTG...TGGGGAGTAGAAAGTGGCTACAGGCAGCAGCTTAGCTTGCGCACCTTGATGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| CDS-3UTR GCA 90 bp | CCTAGGCAGCTGTCCAGGCAGCCCAGGAGATTGAGAATAGCTGCAGTACTGGAAGAAGCTCGCAGGCTCTaGTTCTCGTCGAACTTTTTC | + |
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Preference number: 4 (lower is better) Translates to: PRQLSRQPRRLRIAAVLEEARRL*FSSNFF Trigger: GAAAAAGTTCGACGAGAAGCAGAGCCTGCGAGCTTC...TTCCAGTACTGCAGCTATTCTCAATCTCCTGGGCTGCCTGGACAGCTGCCTAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| CDS-3UTR GCA 90 bp | TATCTCTTGGATGTACTAAGAAAGCAAGTTTACCAGGAGCCTTACTTACCAAGGCGCTCCTGCTGCCGGTaGAGTTCGTTCTCGGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: YLLDVLRKQVYQEPYLPRRSCCR*SSFSVS Trigger: GCTGACCGAGAACGAACTGCACCGGCAGCAGGAGCG...CCTTGGTAAGTAAGGCTCCTGGTAAACTTGCTTTCTTAGTACATCCAAGAGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| CDS-3UTR GCA 90 bp | TTATCTTGGCTATCTCTTGGATGTACTAAGAAAGCAAGTTTACCAGGAGCCTTAGGCGCTCGCTCCTGCTaGCGGTGCAGTTCGTTCTCG | + |
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Preference number: 4 (lower is better) Translates to: LSWLSLGCTKKASLPGALGARSC*RCSSFS Trigger: CGAGAACGAACTGCACCGGCAGCAGGAGCGAGCGCC...TAAGGCTCCTGGTAAACTTGCTTTCTTAGTACATCCAAGAGATAGCCAAGATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| CDS-3UTR GCA 90 bp | TATCTCTTGGATGTACTAAGAAAGCAAGTTTACCAGGAGCCTTACTTACCAAGGAGAGGCGCTCGCTCCTaGTGCCGGTGCAGTTCGTTC | + |
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Preference number: 4 (lower is better) Translates to: YLLDVLRKQVYQEPYLPRRGARS*CRCSSF Trigger: GAACGAACTGCACCGGCAGCAGGAGCGAGCGCCTCT...CCTTGGTAAGTAAGGCTCCTGGTAAACTTGCTTTCTTAGTACATCCAAGAGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| CDS-3UTR CCA 90 bp | AAGGGGCATTTCAAATTTCAGTTGGATTCTAATGGAAAGGGCAGCTTTTCTTTCCCGTTCCTCCGCGCTTaGGGGGCGCTCAGAGGTATG | + |
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Preference number: 4 (lower is better) Translates to: KGHFKFQLDSNGKGSFSFPFLRA*GALRGM Trigger: CATACCTCTGAGCGCCCCCCAAGCGCGGAGGAACGG...GAAAGAAAAGCTGCCCTTTCCATTAGAATCCAACTGAAATTTGAAATGCCCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| CDS-3UTR CCA 90 bp | TATCTCTTGGATGTACTAAGAAAGCAAGTTTACCAGGAGCCTTACTTACCAAGGTGGTGTCGTCGGATTTaGCGGCTGCCCGCTTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: YLLDVLRKQVYQEPYLPRWCRRI*RLPAWG Trigger: ACCCCAAGCGGGCAGCCGCCAAATCCGACGACACCA...CCTTGGTAAGTAAGGCTCCTGGTAAACTTGCTTTCTTAGTACATCCAAGAGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| 3UTR CAA 72 bp | AGCCTTACTTACCAAGGTAGGCAAACAGGAACTCCATaGGAATTTTGTGGGGTGGTTAGGACGGAAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SLTYQGRQTGTP*EFCGVVRTEAR Trigger: CCTGGCTTCCGTCCTAACCACCCCACAAAATTCCAATGGAGTTCCTGTTTGCCTACCTTGGTAAGTAAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| CDS-3UTR GCA 90 bp | TTATCTTGGCTATCTCTTGGATGTACTAAGAAAGCAAGTTTACCAGGAGCCTTAGTCGGATTTGGCGGCTaGCCGCTTGGGGTAAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: LSWLSLGCTKKASLPGALVGFGG*PLGVKA Trigger: GGCCTTTACCCCAAGCGGGCAGCCGCCAAATCCGAC...TAAGGCTCCTGGTAAACTTGCTTTCTTAGTACATCCAAGAGATAGCCAAGATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| CDS-3UTR CCA 90 bp | AAGGGGCATTTCAAATTTCAGTTGGATTCTAATGGAAAGGGCAGCTTTTCTTTCACCTACTGTCCTCCTTaGGCACCCGTTCCTCCGCGC | + |
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Preference number: 4 (lower is better) Translates to: KGHFKFQLDSNGKGSFSFTYCPP*APVPPR Trigger: GCGCGGAGGAACGGGTGCCCAAGGAGGACAGTAGGT...GAAAGAAAAGCTGCCCTTTCCATTAGAATCCAACTGAAATTTGAAATGCCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| CDS-3UTR CCA 90 bp | TTATCTTGGCTATCTCTTGGATGTACTAAGAAAGCAAGTTTACCAGGAGCCTTATTCTCCCTCCTGCCCTaGACGGCTACCGGACTGCAA | + |
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Preference number: 4 (lower is better) Translates to: LSWLSLGCTKKASLPGALFSLLP*TATGLQ Trigger: TTGCAGTCCGGTAGCCGTCCAGGGCAGGAGGGAGAA...TAAGGCTCCTGGTAAACTTGCTTTCTTAGTACATCCAAGAGATAGCCAAGATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| CDS-3UTR CCA 90 bp | AAGGGGCATTTCAAATTTCAGTTGGATTCTAATGGAAAGGGCAGCTTTTCTTTCCAGGAGCCTCCTGCTTaGTGGCCTCCGAGTCATGAC | + |
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Preference number: 4 (lower is better) Translates to: KGHFKFQLDSNGKGSFSFQEPPA*WPPSHD Trigger: GTCATGACTCGGAGGCCACCAAGCAGGAGGCTCCTG...GAAAGAAAAGCTGCCCTTTCCATTAGAATCCAACTGAAATTTGAAATGCCCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| CDS-3UTR CCA 90 bp | TTATCTTGGCTATCTCTTGGATGTACTAAGAAAGCAAGTTTACCAGGAGCCTTATTCTCGGTCAGCAGCTaGAGGTTCTCAGCGCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LSWLSLGCTKKASLPGALFSVSS*RFSARS Trigger: GCTGCGCGCTGAGAACCTCCAGCTGCTGACCGAGAA...TAAGGCTCCTGGTAAACTTGCTTTCTTAGTACATCCAAGAGATAGCCAAGATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| CDS-3UTR CCA 90 bp | TTATCTTGGCTATCTCTTGGATGTACTAAGAAAGCAAGTTTACCAGGAGCCTTAAAGTCCTCCCCATTCTaGCCCTTCTCGCCCTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: LSWLSLGCTKKASLPGALKSSPF*PFSPFS Trigger: GGAGAAGGGCGAGAAGGGCCAGAATGGGGAGGACTT...TAAGGCTCCTGGTAAACTTGCTTTCTTAGTACATCCAAGAGATAGCCAAGATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| CDS-3UTR TCA 90 bp | TATCTCTTGGATGTACTAAGAAAGCAAGTTTACCAGGAGCCTTACTTACCAAGGGGTAAAGGCCGGTTTTaGGATCAGGCTCCTCCTGAT | + |
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Preference number: 4 (lower is better) Translates to: YLLDVLRKQVYQEPYLPRGKGRF*DQAPPD Trigger: ATCAGGAGGAGCCTGATCTCAAAACCGGCCTTTACC...CCTTGGTAAGTAAGGCTCCTGGTAAACTTGCTTTCTTAGTACATCCAAGAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| 3UTR CAA 72 bp | ATTGAGAATAGCTGCAGTACTGGAAACATGCAGGGTTaGTATTCATCATCTAAAGACCTCAGCCCGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: IENSCSTGNMQG*YSSSKDLSPLL Trigger: CAGGAGCGGGCTGAGGTCTTTAGATGATGAATACAAACCCTGCATGTTTCCAGTACTGCAGCTATTCTCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| CDS-3UTR TCA 90 bp | TTATCTTGGCTATCTCTTGGATGTACTAAGAAAGCAAGTTTACCAGGAGCCTTAATGCCGCTTCTTCTTTaGGGGGCGTCTCCGATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSWLSLGCTKKASLPGALMPLLL*GASPMF Trigger: AAACATCGGAGACGCCCCTCAAAGAAGAAGCGGCAT...TAAGGCTCCTGGTAAACTTGCTTTCTTAGTACATCCAAGAGATAGCCAAGATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS-3UTR GCA 90 bp | AAGGGGCATTTCAAATTTCAGTTGGATTCTAATGGAAAGGGCAGCTTTTCTTTCGGGCGCTCAGAGGTATaGTCTTCATGGACAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KGHFKFQLDSNGKGSFSFGRSEV*SSWTTA Trigger: TGCTGTTGTCCATGAAGAGCATACCTCTGAGCGCCC...GAAAGAAAAGCTGCCCTTTCCATTAGAATCCAACTGAAATTTGAAATGCCCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS-3UTR GCA 90 bp | TTATCTTGGCTATCTCTTGGATGTACTAAGAAAGCAAGTTTACCAGGAGCCTTAAAGGACGCTCTCGATTaGCACCTACTGTCCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSWLSLGCTKKASLPGALKDALD*HLLSSL Trigger: CAAGGAGGACAGTAGGTGGCAATCGAGAGCGTCCTT...TAAGGCTCCTGGTAAACTTGCTTTCTTAGTACATCCAAGAGATAGCCAAGATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS-3UTR GCA 90 bp | AGCCATTTGAAGTCCAACATATCGCTAACATGTTTTCTCACAAGTTTATCTTGGTGCTTGCTCATGTTCTaGAGGCTCTCGGCGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SHLKSNISLTCFLTSLSWCLLMF*RLSAWY Trigger: GTACCACGCCGAGAGCCTGCAGAACATGAGCAAGCA...CCAAGATAAACTTGTGAGAAAACATGTTAGCGATATGTTGGACTTCAAATGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| 3UTR CAA 72 bp | TTGCCAAATCAGGCTTATACTTTTGTTAGCACTCTTTaGAACAGCCATCAAGGTGCGCAAGCTAAGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPNQAYTFVSTL*NSHQGAQAKLL Trigger: CAGCAGCTTAGCTTGCGCACCTTGATGGCTGTTCAAAAGAGTGCTAACAAAAGTATAAGCCTGATTTGGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS-3UTR CCA 90 bp | TTATCTTGGCTATCTCTTGGATGTACTAAGAAAGCAAGTTTACCAGGAGCCTTACAGGGAGCTCAATTCTaGACAGGCATTCGTCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSWLSLGCTKKASLPGALQGAQF*TGIRLQ Trigger: TTGCAGACGAATGCCTGTCCAGAATTGAGCTCCCTG...TAAGGCTCCTGGTAAACTTGCTTTCTTAGTACATCCAAGAGATAGCCAAGATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS-3UTR CCA 90 bp | AGCCATTTGAAGTCCAACATATCGCTAACATGTTTTCTCACAAGTTTATCTTGGCAAAATCCTCATCGCTaGTGTCGTCGGATTTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SHLKSNISLTCFLTSLSWQNPHR*CRRIWR Trigger: CCGCCAAATCCGACGACACCAGCGATGAGGATTTTG...CCAAGATAAACTTGTGAGAAAACATGTTAGCGATATGTTGGACTTCAAATGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS-3UTR GCA 90 bp | AAGGGGCATTTCAAATTTCAGTTGGATTCTAATGGAAAGGGCAGCTTTTCTTTCTCTTTGATGAGCTCCTaGTTGCTCATGTTCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KGHFKFQLDSNGKGSFSFSLMSS*LLMFCR Trigger: CCTGCAGAACATGAGCAAGCAGGAGCTCATCAAAGA...GAAAGAAAAGCTGCCCTTTCCATTAGAATCCAACTGAAATTTGAAATGCCCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS TCA 90 bp | TCGCCTCCGGCGGCAGGAGCCTCCTGCTTGGTGGCCTCCGAGTCATaGCCTGGCTGCACGAGGGACTCTGACATCGGCTCTCCCTCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: SPPAAGASCLVASES*PGCTRDSDIGSPSA Trigger: GGCGGAGGGAGAGCCGATGTCAGAGTCCCTCGTGCAGCCAGGTCATGACTCGGAGGCCACCAAGCAGGAGGCTCCTGCCGCCGGAGGCGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS CCA 90 bp | GTCCCCATGGCTCCTCGCCTCCGGCGGCAGGAGCCTCCTGCTTGGTaGCCTCCGAGTCATGACCTGGCTGCACGAGGGACTCTGACATCG | + |
|
Preference number: 5 (lower is better) Translates to: VPMAPRLRRQEPPAW*PPSHDLAARGTLTS Trigger: CGATGTCAGAGTCCCTCGTGCAGCCAGGTCATGACTCGGAGGCCACCAAGCAGGAGGCTCCTGCCGCCGGAGGCGAGGAGCCATGGGGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS CCA 90 bp | GCTGTCCCCATGGCTCCTCGCCTCCGGCGGCAGGAGCCTCCTGCTTaGTGGCCTCCGAGTCATGACCTGGCTGCACGAGGGACTCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: AVPMAPRLRRQEPPA*WPPSHDLAARGTLT Trigger: TGTCAGAGTCCCTCGTGCAGCCAGGTCATGACTCGGAGGCCACCAAGCAGGAGGCTCCTGCCGCCGGAGGCGAGGAGCCATGGGGACAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS CCA 90 bp | GGCGCTCGCTCCTGCTGCCGGTGCAGTTCGTTCTCGGTCAGCAGCTaGAGGTTCTCAGCGCGCAGCCGGTCCAGCTCTAGCTCGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GARSCCRCSSFSVSS*RFSARSRSSSSSSS Trigger: GGAGCTCGAGCTAGAGCTGGACCGGCTGCGCGCTGAGAACCTCCAGCTGCTGACCGAGAACGAACTGCACCGGCAGCAGGAGCGAGCGCC 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS GCA 90 bp | CCCTCCTGCCCTGGACGGCTACCGGACTGCAAGGACGCTCTCGATTaGCACCTACTGTCCTCCTTGGGCACCCGTTCCTCCGCGCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PSCPGRLPDCKDALD*HLLSSLGTRSSALG Trigger: CCCAAGCGCGGAGGAACGGGTGCCCAAGGAGGACAGTAGGTGGCAATCGAGAGCGTCCTTGCAGTCCGGTAGCCGTCCAGGGCAGGAGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS GCA 90 bp | CTAGCTCGAGCTCCCGCACTCGCGCGTCGACGCCTCCCAGCCGCTTaGTTTCCAGCCGCAGCCGGTTATTTTCGTCCTCCTTGCGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LARAPALARRRLPAA*FPAAAGYFRPPCGR Trigger: TCTCCCGCAAGGAGGACGAAAATAACCGGCTGCGGCTGGAAAGCAAGCGGCTGGGAGGCGTCGACGCGCGAGTGCGGGAGCTCGAGCTAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS CCA 90 bp | ACTCTGACATCGGCTCTCCCTCCGCCGACGGGGAGGCACCGCCAGTaGATAAGTCCTCCCCATTCTGGCCCTTCTCGCCCTTCTCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TLTSALPPPTGRHRQ*ISPPHSGPSRPSPG Trigger: CCCTGGAGAAGGGCGAGAAGGGCCAGAATGGGGAGGACTTATCCACTGGCGGTGCCTCCCCGTCGGCGGAGGGAGAGCCGATGTCAGAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS GCA 90 bp | TGCTTCAGGCCCCCTTCTCCCTCCTGCCCTGGACGGCTACCGGACTaGAAGGACGCTCTCGATTGCCACCTACTGTCCTCCTTGGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: CFRPPSPSCPGRLPD*KDALDCHLLSSLGT Trigger: GGTGCCCAAGGAGGACAGTAGGTGGCAATCGAGAGCGTCCTTGCAGTCCGGTAGCCGTCCAGGGCAGGAGGGAGAAGGGGGCCTGAAGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS GCA 90 bp | GGTACCGCTCGTACGTCTCCGAGAAGTCCCGCTGCAGAAACTCGCTaGCGTCCCCTCCCATGCCATCGCTGCCTCCGTCTTCCTCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: GTARTSPRSPAAETR*RPLPCHRCLRLPHQ Trigger: CTGGTGAGGAAGACGGAGGCAGCGATGGCATGGGAGGGGACGGCAGCGAGTTTCTGCAGCGGGACTTCTCGGAGACGTACGAGCGGTACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS CCA 90 bp | AGGGAGCTCAATTCTGGACAGGCATTCGTCTGCAATGGGGGCAGCTaGTGCTTCAGGCCCCCTTCTCCCTCCTGCCCTGGACGGCTACCG | + |
|
Preference number: 5 (lower is better) Translates to: RELNSGQAFVCNGGS*CFRPPSPSCPGRLP Trigger: CGGTAGCCGTCCAGGGCAGGAGGGAGAAGGGGGCCTGAAGCACCAGCTGCCCCCATTGCAGACGAATGCCTGTCCAGAATTGAGCTCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS CCA 90 bp | GCCCTTCTCCAGGGAGCTCAATTCTGGACAGGCATTCGTCTGCAATaGGGGCAGCTGGTGCTTCAGGCCCCCTTCTCCCTCCTGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ALLQGAQFWTGIRLQ*GQLVLQAPFSLLPW Trigger: CCAGGGCAGGAGGGAGAAGGGGGCCTGAAGCACCAGCTGCCCCCATTGCAGACGAATGCCTGTCCAGAATTGAGCTCCCTGGAGAAGGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS CCA 90 bp | TCCGCCGACGGGGAGGCACCGCCAGTGGATAAGTCCTCCCCATTCTaGCCCTTCTCGCCCTTCTCCAGGGAGCTCAATTCTGGACAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SADGEAPPVDKSSPF*PFSPFSRELNSGQA Trigger: TGCCTGTCCAGAATTGAGCTCCCTGGAGAAGGGCGAGAAGGGCCAGAATGGGGAGGACTTATCCACTGGCGGTGCCTCCCCGTCGGCGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS CCA 90 bp | CGATTGCCACCTACTGTCCTCCTTGGGCACCCGTTCCTCCGCGCTTaGGGGGCGCTCAGAGGTATGCTCTTCATGGACAACAGCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: RLPPTVLLGHPFLRA*GALRGMLFMDNSST Trigger: GGTGCTGCTGTTGTCCATGAAGAGCATACCTCTGAGCGCCCCCCAAGCGCGGAGGAACGGGTGCCCAAGGAGGACAGTAGGTGGCAATCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS CCA 90 bp | CTCCCCATTCTGGCCCTTCTCGCCCTTCTCCAGGGAGCTCAATTCTaGACAGGCATTCGTCTGCAATGGGGGCAGCTGGTGCTTCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LPILALLALLQGAQF*TGIRLQWGQLVLQA Trigger: GGCCTGAAGCACCAGCTGCCCCCATTGCAGACGAATGCCTGTCCAGAATTGAGCTCCCTGGAGAAGGGCGAGAAGGGCCAGAATGGGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS GCA 90 bp | AGTCCCGCTGCAGAAACTCGCTGCCGTCCCCTCCCATGCCATCGCTaGCTCCGTCTTCCTCACCAGCTTCTTCCACAAAATCCTCATCGC | + |
|
Preference number: 5 (lower is better) Translates to: SPAAETRCRPLPCHR*LRLPHQLLPQNPHR Trigger: GCGATGAGGATTTTGTGGAAGAAGCTGGTGAGGAAGACGGAGGCAGCGATGGCATGGGAGGGGACGGCAGCGAGTTTCTGCAGCGGGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS CCA 90 bp | TGCCTCCGTCTTCCTCACCAGCTTCTTCCACAAAATCCTCATCGCTaGTGTCGTCGGATTTGGCGGCTGCCCGCTTGGGGTAAAGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: CLRLPHQLLPQNPHR*CRRIWRLPAWGKGR Trigger: CCGGCCTTTACCCCAAGCGGGCAGCCGCCAAATCCGACGACACCAGCGATGAGGATTTTGTGGAAGAAGCTGGTGAGGAAGACGGAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| CDS GCA 90 bp | TCTCCGAGAAGTCCCGCTGCAGAAACTCGCTGCCGTCCCCTCCCATaGCATCGCTGCCTCCGTCTTCCTCACCAGCTTCTTCCACAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: SPRSPAAETRCRPLP*HRCLRLPHQLLPQN Trigger: ATTTTGTGGAAGAAGCTGGTGAGGAAGACGGAGGCAGCGATGGCATGGGAGGGGACGGCAGCGAGTTTCTGCAGCGGGACTTCTCGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| CDS-3UTR CAA 90 bp | CCTAGGCAGCTGTCCAGGCAGCCCAGGAGATTGAGAATAGCTGCAGTACTGGAAGCCCAGCTGTCTCTGTaGCTGTCCCCATGGCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PRQLSRQPRRLRIAAVLEAQLSL*LSPWLL Trigger: GAGGAGCCATGGGGACAGCAACAGAGACAGCTGGGC...TTCCAGTACTGCAGCTATTCTCAATCTCCTGGGCTGCCTGGACAGCTGCCTAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| CDS-3UTR CAA 90 bp | CTCAGAGCCTCCCTGCATTTTCAAGAGCAGCCTAACCTAGGCAGCTGTCCAGGCAATGCCGCTTCTTCTTaGAGGGGCGTCTCCGATGTT | + |
|
Preference number: 5 (lower is better) Translates to: LRASLHFQEQPNLGSCPGNAASS*RGVSDV Trigger: AACATCGGAGACGCCCCTCAAAGAAGAAGCGGCATT...GCCTGGACAGCTGCCTAGGTTAGGCTGCTCTTGAAAATGCAGGGAGGCTCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| CDS-3UTR CAA 90 bp | AGCCATCAAGGTGCGCAAGCTAAGCTGCTGCCTGTAGCCACTTTCTACTCCCCAAGTTTGAGGCTGGTGTaGATGTTCTGTCAAGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SHQGAQAKLLPVATFYSPSLRLV*MFCQEW Trigger: CCACTCTTGACAGAACATCAACACCAGCCTCAAACT...TGGGGAGTAGAAAGTGGCTACAGGCAGCAGCTTAGCTTGCGCACCTTGATGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| CDS-3UTR CAA 90 bp | AGCCATTTGAAGTCCAACATATCGCTAACATGTTTTCTCACAAGTTTATCTTGGCTGGTGTCGTCGGATTaGGCGGCTGCCCGCTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SHLKSNISLTCFLTSLSWLVSSD*AAARLG Trigger: CCCCAAGCGGGCAGCCGCCAAATCCGACGACACCAG...CCAAGATAAACTTGTGAGAAAACATGTTAGCGATATGTTGGACTTCAAATGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS-3UTR CAA 90 bp | AGCCATTTGAAGTCCAACATATCGCTAACATGTTTTCTCACAAGTTTATCTTGGCACCTACTGTCCTCCTaGGGCACCCGTTCCTCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: SHLKSNISLTCFLTSLSWHLLSS*GTRSSA Trigger: CGCGGAGGAACGGGTGCCCAAGGAGGACAGTAGGTG...CCAAGATAAACTTGTGAGAAAACATGTTAGCGATATGTTGGACTTCAAATGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS-3UTR CAA 90 bp | TATCTCTTGGATGTACTAAGAAAGCAAGTTTACCAGGAGCCTTACTTACCAAGGCAAGGACGCTCTCGATaGCCACCTACTGTCCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: YLLDVLRKQVYQEPYLPRQGRSR*PPTVLL Trigger: AAGGAGGACAGTAGGTGGCAATCGAGAGCGTCCTTG...CCTTGGTAAGTAAGGCTCCTGGTAAACTTGCTTTCTTAGTACATCCAAGAGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS-3UTR CAA 90 bp | TATCTCTTGGATGTACTAAGAAAGCAAGTTTACCAGGAGCCTTACTTACCAAGGTTATTTTCGTCCTCCTaGCGGGAGAGGCACTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: YLLDVLRKQVYQEPYLPRLFSSS*RERHFS Trigger: GGAGAAGTGCCTCTCCCGCAAGGAGGACGAAAATAA...CCTTGGTAAGTAAGGCTCCTGGTAAACTTGCTTTCTTAGTACATCCAAGAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS-3UTR CAA 90 bp | AGCCATTTGAAGTCCAACATATCGCTAACATGTTTTCTCACAAGTTTATCTTGGTGTACAGTTGCTAGTTaGAGGCTGGTGTTGATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SHLKSNISLTCFLTSLSWCTVAS*RLVLMF Trigger: GAACATCAACACCAGCCTCAAACTAGCAACTGTACA...CCAAGATAAACTTGTGAGAAAACATGTTAGCGATATGTTGGACTTCAAATGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS GCA 72 bp | GGGGGCAGCTGGTGCTTCAGGCCCCCTTCTCCCTCCTaGCCTGGACGGCTACCGGACTGCAAGGACGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GGSWCFRPPSPS*PGRLPDCKDAL Trigger: GAGAGCGTCCTTGCAGTCCGGTAGCCGTCCAGGGCAGGAGGGAGAAGGGGGCCTGAAGCACCAGCTGCCCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS CCA 72 bp | TCGGCTCTCCCTCCGCCGACGGGGAGGCACCGCCAGTaGATAAGTCCTCCCCATTCTGGCCCTTCTCGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SALPPPTGRHRQ*ISPPHSGPSRP Trigger: AGGGCGAGAAGGGCCAGAATGGGGAGGACTTATCCACTGGCGGTGCCTCCCCGTCGGCGGAGGGAGAGCCGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS CAA 90 bp | TCCCTCCTGCCCTGGACGGCTACCGGACTGCAAGGACGCTCTCGATaGCCACCTACTGTCCTCCTTGGGCACCCGTTCCTCCGCGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: SLLPWTATGLQGRSR*PPTVLLGHPFLRAW Trigger: CCAAGCGCGGAGGAACGGGTGCCCAAGGAGGACAGTAGGTGGCAATCGAGAGCGTCCTTGCAGTCCGGTAGCCGTCCAGGGCAGGAGGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS CAA 90 bp | TCTAGCTCGAGCTCCCGCACTCGCGCGTCGACGCCTCCCAGCCGCTaGCTTTCCAGCCGCAGCCGGTTATTTTCGTCCTCCTTGCGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSRTRASTPPSR*LSSRSRLFSSSLRE Trigger: CTCCCGCAAGGAGGACGAAAATAACCGGCTGCGGCTGGAAAGCAAGCGGCTGGGAGGCGTCGACGCGCGAGTGCGGGAGCTCGAGCTAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS GCA 72 bp | GCGTGGTACCGCTCGTACGTCTCCGAGAAGTCCCGCTaGAGAAACTCGCTGCCGTCCCCTCCCATGCCATCG | + |
|
Preference number: 6 (lower is better) Translates to: AWYRSYVSEKSR*RNSLPSPPMPS Trigger: CGATGGCATGGGAGGGGACGGCAGCGAGTTTCTGCAGCGGGACTTCTCGGAGACGTACGAGCGGTACCACGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS CCA 72 bp | TCCTGCTGCCGGTGCAGTTCGTTCTCGGTCAGCAGCTaGAGGTTCTCAGCGCGCAGCCGGTCCAGCTCTAGC | + |
|
Preference number: 6 (lower is better) Translates to: SCCRCSSFSVSS*RFSARSRSSSS Trigger: GCTAGAGCTGGACCGGCTGCGCGCTGAGAACCTCCAGCTGCTGACCGAGAACGAACTGCACCGGCAGCAGGA 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS GCA 72 bp | CCTGGACGGCTACCGGACTGCAAGGACGCTCTCGATTaGCACCTACTGTCCTCCTTGGGCACCCGTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PGRLPDCKDALD*HLLSSLGTRSS Trigger: GGAGGAACGGGTGCCCAAGGAGGACAGTAGGTGGCAATCGAGAGCGTCCTTGCAGTCCGGTAGCCGTCCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS GCA 72 bp | CGTACGTCTCCGAGAAGTCCCGCTGCAGAAACTCGCTaGCGTCCCCTCCCATGCCATCGCTGCCTCCGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: RTSPRSPAAETR*RPLPCHRCLRL Trigger: AAGACGGAGGCAGCGATGGCATGGGAGGGGACGGCAGCGAGTTTCTGCAGCGGGACTTCTCGGAGACGTACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS CAA 72 bp | CCCTGGACGGCTACCGGACTGCAAGGACGCTCTCGATaGCCACCTACTGTCCTCCTTGGGCACCCGTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PWTATGLQGRSR*PPTVLLGHPFL Trigger: GAGGAACGGGTGCCCAAGGAGGACAGTAGGTGGCAATCGAGAGCGTCCTTGCAGTCCGGTAGCCGTCCAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS CCA 72 bp | CCTACTGTCCTCCTTGGGCACCCGTTCCTCCGCGCTTaGGGGGCGCTCAGAGGTATGCTCTTCATGGACAAC | + |
|
Preference number: 6 (lower is better) Translates to: PTVLLGHPFLRA*GALRGMLFMDN Trigger: GTTGTCCATGAAGAGCATACCTCTGAGCGCCCCCCAAGCGCGGAGGAACGGGTGCCCAAGGAGGACAGTAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS GCA 72 bp | CCGAACTTGGAAAGAGGCGCTCGCTCCTGCTGCCGGTaGAGTTCGTTCTCGGTCAGCAGCTGGAGGTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: PNLERGARSCCR*SSFSVSSWRFS Trigger: TGAGAACCTCCAGCTGCTGACCGAGAACGAACTGCACCGGCAGCAGGAGCGAGCGCCTCTTTCCAAGTTCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS CCA 72 bp | CAGGGAGCTCAATTCTGGACAGGCATTCGTCTGCAATaGGGGCAGCTGGTGCTTCAGGCCCCCTTCTCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: QGAQFWTGIRLQ*GQLVLQAPFSL Trigger: GAGGGAGAAGGGGGCCTGAAGCACCAGCTGCCCCCATTGCAGACGAATGCCTGTCCAGAATTGAGCTCCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS CCA 72 bp | GGGGAGGCACCGCCAGTGGATAAGTCCTCCCCATTCTaGCCCTTCTCGCCCTTCTCCAGGGAGCTCAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: GEAPPVDKSSPF*PFSPFSRELNS Trigger: AGAATTGAGCTCCCTGGAGAAGGGCGAGAAGGGCCAGAATGGGGAGGACTTATCCACTGGCGGTGCCTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS CCA 72 bp | CTTCCTCACCAGCTTCTTCCACAAAATCCTCATCGCTaGTGTCGTCGGATTTGGCGGCTGCCCGCTTGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LPHQLLPQNPHR*CRRIWRLPAWG Trigger: ACCCCAAGCGGGCAGCCGCCAAATCCGACGACACCAGCGATGAGGATTTTGTGGAAGAAGCTGGTGAGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
||
| CDS GCA 72 bp | AACATCTCGGCTCGAACCCGCGAAGCTCGCAGGCTCTaGTTCTCGTCGAACTTTTTCTTCTCCTCCCAAGTC | + |
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Preference number: 6 (lower is better) Translates to: NISARTREARRL*FSSNFFFSSQV Trigger: GACTTGGGAGGAGAAGAAAAAGTTCGACGAGAAGCAGAGCCTGCGAGCTTCGCGGGTTCGAGCCGAGATGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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| CDS CAA 72 bp | TTCATGGACAACAGCAGCACCTGTACAGTTGCTAGTTaGAGGCTGGTGTTGATGTTCTGTCAAGAGTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: FMDNSSTCTVAS*RLVLMFCQEWL Trigger: GAGCCACTCTTGACAGAACATCAACACCAGCCTCAAACTAGCAACTGTACAGGTGCTGCTGTTGTCCATGAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053063.7 |
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