Pregenerated sensors for HEXA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025232Ensembl transcript IDs: ENSMUST00000026262.8
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | CTTAAGGCCAGCACCCTCCTGGGTGCTCAGCGCAGCTaGCTCAAAGGACAGCAACCTCCTGGGTGTTCAGCA | + |
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Preference number: 3 (lower is better) Translates to: LKASTLLGAQRS*LKGQQPPGCSA Trigger: TGCTGAACACCCAGGAGGTTGCTGTCCTTTGAGTCAGCTGCGCTGAGCACCCAGGAGGGTGCTGGCCTTAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS-3UTR GCA 90 bp | ATTAGCCCTGCCCCGGGACCTGCTCTCTTAAGGCCAGCACCCTCCTGGGTGCTCGGGCCACGGCCACAGTaGCGTGGCCAAGCAAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: ISPAPGPALLRPAPSWVLGPRPQ*RGQASQ Trigger: TTGGCTTGCTTGGCCACGGCACTGTGGCCGTGGCCC...GAGCACCCAGGAGGGTGCTGGCCTTAAGAGAGCAGGTCCCGGGGCAGGGCTAAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS-3UTR CCA 90 bp | CTCAGCGCAGCTGACTCAAAGGACAGCAACCTCCTGGGTGTTCAGCACTGGTGGCGACGGCACCCGCTCTaGGCCAGAGTCTGGGGACCA | + |
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Preference number: 4 (lower is better) Translates to: LSAADSKDSNLLGVQHWWRRHPL*ARVWGP Trigger: TGGTCCCCAGACTCTGGCCCAGAGCGGGTGCCGTCG...CCACCAGTGCTGAACACCCAGGAGGTTGCTGTCCTTTGAGTCAGCTGCGCTGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS-3UTR CCA 90 bp | ATTAGCCCTGCCCCGGGACCTGCTCTCTTAAGGCCAGCACCCTCCTGGGTGCTCCTGATGGGCTGGGCCTaGATTCCTCTCCTCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: ISPAPGPALLRPAPSWVLLMGWA*IPLLTS Trigger: GCTGGTGAGGAGAGGAATCCAGGCCCAGCCCATCAG...GAGCACCCAGGAGGGTGCTGGCCTTAAGAGAGCAGGTCCCGGGGCAGGGCTAAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS-3UTR TCA 90 bp | ATTAGCCCTGCCCCGGGACCTGCTCTCTTAAGGCCAGCACCCTCCTGGGTGCTCCCGGGAAGACTGAGCTaGTCTCCAGGAAGAGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: ISPAPGPALLRPAPSWVLPGRLS*SPGRVC Trigger: GCACACTCTTCCTGGAGATCAGCTCAGTCTTCCCGG...GAGCACCCAGGAGGGTGCTGGCCTTAAGAGAGCAGGTCCCGGGGCAGGGCTAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS-3UTR CCA 90 bp | ATTAGCCCTGCCCCGGGACCTGCTCTCTTAAGGCCAGCACCCTCCTGGGTGCTCCCTACACTGATGGGCTaGGCCTGGATTCCTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ISPAPGPALLRPAPSWVLPTLMG*AWIPLL Trigger: GAGGAGAGGAATCCAGGCCCAGCCCATCAGTGTAGG...GAGCACCCAGGAGGGTGCTGGCCTTAAGAGAGCAGGTCCCGGGGCAGGGCTAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS-3UTR TCA 90 bp | ATTAGCCCTGCCCCGGGACCTGCTCTCTTAAGGCCAGCACCCTCCTGGGTGCTCCCCGCCACACCTGTATaGTTGTATCTGGCCGAACCT | + |
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Preference number: 4 (lower is better) Translates to: ISPAPGPALLRPAPSWVLPATPV*LYLAEP Trigger: AGGTTCGGCCAGATACAATCATACAGGTGTGGCGGG...GAGCACCCAGGAGGGTGCTGGCCTTAAGAGAGCAGGTCCCGGGGCAGGGCTAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS-3UTR CCA 90 bp | ATTAGCCCTGCCCCGGGACCTGCTCTCTTAAGGCCAGCACCCTCCTGGGTGCTCGTCTGGGGACCAGGTTaGTGCTGTCCACATACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ISPAPGPALLRPAPSWVLVWGPG*CCPHTL Trigger: GAGAGTATGTGGACAGCACCAACCTGGTCCCCAGAC...GAGCACCCAGGAGGGTGCTGGCCTTAAGAGAGCAGGTCCCGGGGCAGGGCTAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS-3UTR TCA 90 bp | ATTAGCCCTGCCCCGGGACCTGCTCTCTTAAGGCCAGCACCCTCCTGGGTGCTCAAAGTCCGGGAAGACTaGGCTGATCTCCAGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ISPAPGPALLRPAPSWVLKVRED*ADLQEE Trigger: CTCTTCCTGGAGATCAGCTCAGTCTTCCCGGACTTT...GAGCACCCAGGAGGGTGCTGGCCTTAAGAGAGCAGGTCCCGGGGCAGGGCTAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS-3UTR GCA 90 bp | TGCTCAGCGCAGCTGACTCAAAGGACAGCAACCTCCTGGGTGTTCAGCACTGGTTGGGGACCAGGTTGGTaGTGTCCACATACTCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: CSAQLTQRTATSWVFSTGWGPGW*CPHTLP Trigger: GGGGAGAGTATGTGGACAGCACCAACCTGGTCCCCA...ACCAGTGCTGAACACCCAGGAGGTTGCTGTCCTTTGAGTCAGCTGCGCTGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS-3UTR CCA 90 bp | ATTAGCCCTGCCCCGGGACCTGCTCTCTTAAGGCCAGCACCCTCCTGGGTGCTCCAGGATGCTAGACAATaGCAGGTAATGGCGAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: ISPAPGPALLRPAPSWVLQDARQ*QVMARC Trigger: ACATCTCGCCATTACCTGCCATTGTCTAGCATCCTG...GAGCACCCAGGAGGGTGCTGGCCTTAAGAGAGCAGGTCCCGGGGCAGGGCTAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS-3UTR CCA 90 bp | ATTAGCCCTGCCCCGGGACCTGCTCTCTTAAGGCCAGCACCCTCCTGGGTGCTCTTCTTCATGAAGGCCTaGATGTTGGGGTTGGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISPAPGPALLRPAPSWVLFFMKA*MLGLDF Trigger: GAAGTCCAACCCCAACATCCAGGCCTTCATGAAGAA...GAGCACCCAGGAGGGTGCTGGCCTTAAGAGAGCAGGTCCCGGGGCAGGGCTAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS-3UTR GCA 90 bp | CTCAGCGCAGCTGACTCAAAGGACAGCAACCTCCTGGGTGTTCAGCACTGGTGGAGGAGTGTCAAATTCTaGCAGCACACGGATACCCCG | + |
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Preference number: 4 (lower is better) Translates to: LSAADSKDSNLLGVQHWWRSVKF*QHTDTP Trigger: CGGGGTATCCGTGTGCTGGCAGAATTTGACACTCCT...CCACCAGTGCTGAACACCCAGGAGGTTGCTGTCCTTTGAGTCAGCTGCGCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS-3UTR TCA 90 bp | CTCAGCGCAGCTGACTCAAAGGACAGCAACCTCCTGGGTGTTCAGCACTGGTGGTCCAAACAAGCTGACTaGAAGTCTCCAGACCTCGGA | + |
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Preference number: 4 (lower is better) Translates to: LSAADSKDSNLLGVQHWWSKQAD*KSPDLG Trigger: TCCGAGGTCTGGAGACTTTCAGTCAGCTTGTTTGGA...CCACCAGTGCTGAACACCCAGGAGGTTGCTGTCCTTTGAGTCAGCTGCGCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS-3UTR TCA 90 bp | CTCAGCGCAGCTGACTCAAAGGACAGCAACCTCCTGGGTGTTCAGCACTGGTGGGCCTTGCGTATTCAATaGCCTCCTTCACATCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: LSAADSKDSNLLGVQHWWALRIQ*PPSHPV Trigger: CACAGGATGTGAAGGAGGTCATTGAATACGCAAGGC...CCACCAGTGCTGAACACCCAGGAGGTTGCTGTCCTTTGAGTCAGCTGCGCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS-3UTR TCA 90 bp | TGCTCAGCGCAGCTGACTCAAAGGACAGCAACCTCCTGGGTGTTCAGCACTGGTGGAAGCCAGCCCTGGTaGTATCTTGCATCTCCAACA | + |
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Preference number: 4 (lower is better) Translates to: CSAQLTQRTATSWVFSTGGSQPW*YLASPT Trigger: TGTTGGAGATGCAAGATATCACCAGGGCTGGCTTCC...ACCAGTGCTGAACACCCAGGAGGTTGCTGTCCTTTGAGTCAGCTGCGCTGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS-3UTR CCA 90 bp | CTCAGCGCAGCTGACTCAAAGGACAGCAACCTCCTGGGTGTTCAGCACTGGTGGACATGGTACCGGAACTaGAAGTTGTTGGGGTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSAADSKDSNLLGVQHWWTWYRN*KLLGYR Trigger: CCTGTACCCCAACAACTTCCAGTTCCGGTACCATGT...CCACCAGTGCTGAACACCCAGGAGGTTGCTGTCCTTTGAGTCAGCTGCGCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS-3UTR CCA 90 bp | ATTAGCCCTGCCCCGGGACCTGCTCTCTTAAGGCCAGCACCCTCCTGGGTGCTCTCCACCAAGTGCCAGTaGAACACGTTGAATTTATTG | + |
|
Preference number: 4 (lower is better) Translates to: ISPAPGPALLRPAPSWVLSTKCQ*NTLNLL Trigger: CAATAAATTCAACGTGTTCCACTGGCACTTGGTGGA...GAGCACCCAGGAGGGTGCTGGCCTTAAGAGAGCAGGTCCCGGGGCAGGGCTAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS-3UTR CCA 90 bp | TGCTCAGCGCAGCTGACTCAAAGGACAGCAACCTCCTGGGTGTTCAGCACTGGTCCCCAGGACAAAGTGTaGCCAGGAGTGTCAAATTCT | + |
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Preference number: 4 (lower is better) Translates to: CSAQLTQRTATSWVFSTGPQDKV*PGVSNS Trigger: AGAATTTGACACTCCTGGCCACACTTTGTCCTGGGG...ACCAGTGCTGAACACCCAGGAGGTTGCTGTCCTTTGAGTCAGCTGCGCTGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS-3UTR CCA 90 bp | CTCAGCGCAGCTGACTCAAAGGACAGCAACCTCCTGGGTGTTCAGCACTGGTGGCAACATGTACTCTACTaGCATTTCTTCCCGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LSAADSKDSNLLGVQHWWQHVLY*HFFPPH Trigger: GTGTGGCGGGAAGAAATGCCAGTAGAGTACATGTTG...CCACCAGTGCTGAACACCCAGGAGGTTGCTGTCCTTTGAGTCAGCTGCGCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS-3UTR GCA 90 bp | TGCTCAGCGCAGCTGACTCAAAGGACAGCAACCTCCTGGGTGTTCAGCACTGGTCTCCTTCACATCCTGTaGTGTGTAGATGTGAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: CSAQLTQRTATSWVFSTGLLHIL*CVDVSD Trigger: GTCACTCACATCTACACAGCACAGGATGTGAAGGAG...ACCAGTGCTGAACACCCAGGAGGTTGCTGTCCTTTGAGTCAGCTGCGCTGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS-3UTR GCA 90 bp | TGCTCAGCGCAGCTGACTCAAAGGACAGCAACCTCCTGGGTGTTCAGCACTGGTGATACCCCGAAGCCTTaGGTATTCAATGACCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: CSAQLTQRTATSWVFSTGDTPKP*VFNDLL Trigger: AAGGAGGTCATTGAATACGCAAGGCTTCGGGGTATC...ACCAGTGCTGAACACCCAGGAGGTTGCTGTCCTTTGAGTCAGCTGCGCTGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS-3UTR CCA 90 bp | TGCTCAGCGCAGCTGACTCAAAGGACAGCAACCTCCTGGGTGTTCAGCACTGGTAGTGAAGCTCTCATATaGGAAGGAAGAGTCGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: CSAQLTQRTATSWVFSTGSEALI*EGRVVH Trigger: GTGGACGACTCTTCCTTCCCATATGAGAGCTTCACT...ACCAGTGCTGAACACCCAGGAGGTTGCTGTCCTTTGAGTCAGCTGCGCTGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS-3UTR TCA 90 bp | TGCTCAGCGCAGCTGACTCAAAGGACAGCAACCTCCTGGGTGTTCAGCACTGGTGATTTCCAAACAAGCTaGCTGAAAGTCTCCAGACCT | + |
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Preference number: 4 (lower is better) Translates to: CSAQLTQRTATSWVFSTGDFQTS*LKVSRP Trigger: AGGTCTGGAGACTTTCAGTCAGCTTGTTTGGAAATC...ACCAGTGCTGAACACCCAGGAGGTTGCTGTCCTTTGAGTCAGCTGCGCTGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS-3UTR CCA 90 bp | CTCAGCGCAGCTGACTCAAAGGACAGCAACCTCCTGGGTGTTCAGCACTGGTGGGAGGCGAGTAAACACTaGTCATCATTAATGGTTAGG | + |
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Preference number: 4 (lower is better) Translates to: LSAADSKDSNLLGVQHWWEASKH*SSLMVR Trigger: CCTAACCATTAATGATGACCAGTGTTTACTCGCCTC...CCACCAGTGCTGAACACCCAGGAGGTTGCTGTCCTTTGAGTCAGCTGCGCTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS GCA 90 bp | GTAGCGCCGGTGGTAGGTTTGGATGTACTGGGGCCACGGCCACAGTaGCGTGGCCAAGCAAGCCAACGCCGCCGCCAGCAGCAGCGAAAC | + |
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Preference number: 5 (lower is better) Translates to: VAPVVGLDVLGPRPQ*RGQASQRRRQQQRN Trigger: GTTTCGCTGCTGCTGGCGGCGGCGTTGGCTTGCTTGGCCACGGCACTGTGGCCGTGGCCCCAGTACATCCAAACCTACCACCGGCGCTAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS CCA 90 bp | GCCGGTGGTAGGTTTGGATGTACTGGGGCCACGGCCACAGTGCCGTaGCCAAGCAAGCCAACGCCGCCGCCAGCAGCAGCGAAACCCAGA | + |
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Preference number: 5 (lower is better) Translates to: AGGRFGCTGATATVP*PSKPTPPPAAAKPR Trigger: TCTGGGTTTCGCTGCTGCTGGCGGCGGCGTTGGCTTGCTTGGCCACGGCACTGTGGCCGTGGCCCCAGTACATCCAAACCTACCACCGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS TCA 90 bp | GAAAGGCCTCGTCGAGGACGACGCAGCCCGCCTGCGCGGCCGAACTaGCATGGTACCGGAACTGGAAGTTGTTGGGGTACAGGGTGTAGC | + |
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Preference number: 5 (lower is better) Translates to: ERPRRGRRSPPARPN*HGTGTGSCWGTGCS Trigger: GCTACACCCTGTACCCCAACAACTTCCAGTTCCGGTACCATGTCAGTTCGGCCGCGCAGGCGGGCTGCGTCGTCCTCGACGAGGCCTTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS CCA 90 bp | TGCTCCACAGTCTCTCAGCGACGGCACCCGCTCTGGGCCAGAGTCTaGGGACCAGGTTGGTGCTGTCCACATACTCTCCCCACATACAGG | + |
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Preference number: 5 (lower is better) Translates to: CSTVSQRRHPLWARV*GPGWCCPHTLPTYR Trigger: CCTGTATGTGGGGAGAGTATGTGGACAGCACCAACCTGGTCCCCAGACTCTGGCCCAGAGCGGGTGCCGTCGCTGAGAGACTGTGGAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS-3UTR CAA 90 bp | ATTAGCCCTGCCCCGGGACCTGCTCTCTTAAGGCCAGCACCCTCCTGGGTGCTCAGTCTGGGGACCAGGTaGGTGCTGTCCACATACTCT | + |
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Preference number: 5 (lower is better) Translates to: ISPAPGPALLRPAPSWVLSLGTR*VLSTYS Trigger: AGAGTATGTGGACAGCACCAACCTGGTCCCCAGACT...GAGCACCCAGGAGGGTGCTGGCCTTAAGAGAGCAGGTCCCGGGGCAGGGCTAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS CCA 90 bp | TTGTCAGGTTACTGCTCCACAGTCTCTCAGCGACGGCACCCGCTCTaGGCCAGAGTCTGGGGACCAGGTTGGTGCTGTCCACATACTCTC | + |
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Preference number: 5 (lower is better) Translates to: LSGYCSTVSQRRHPL*ARVWGPGWCCPHTL Trigger: GAGAGTATGTGGACAGCACCAACCTGGTCCCCAGACTCTGGCCCAGAGCGGGTGCCGTCGCTGAGAGACTGTGGAGCAGTAACCTGACAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS GCA 90 bp | GGCACCTGGCCCCCAGGACAAAGTGTGGCCAGGAGTGTCAAATTCTaGCAGCACACGGATACCCCGAAGCCTTGCGTATTCAATGACCTC | + |
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Preference number: 5 (lower is better) Translates to: GTWPPGQSVARSVKF*QHTDTPKPCVFNDL Trigger: GAGGTCATTGAATACGCAAGGCTTCGGGGTATCCGTGTGCTGGCAGAATTTGACACTCCTGGCCACACTTTGTCCTGGGGGCCAGGTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS GCA 90 bp | CAGGGAGCAGACAGCAGGGCCCGGAAGCCAGCCCTGGTGATATCTTaGATCTCCAACATGTACTCTACTGGCATTTCTTCCCGCCACACC | + |
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Preference number: 5 (lower is better) Translates to: QGADSRARKPALVIS*ISNMYSTGISSRHT Trigger: GGTGTGGCGGGAAGAAATGCCAGTAGAGTACATGTTGGAGATGCAAGATATCACCAGGGCTGGCTTCCGGGCCCTGCTGTCTGCTCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS-3UTR CAA 90 bp | TGCTCAGCGCAGCTGACTCAAAGGACAGCAACCTCCTGGGTGTTCAGCACTGGTGCCTGGATGTTGGGGTaGGACTTCCAGCAGGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: CSAQLTQRTATSWVFSTGAWMLG*DFQQVK Trigger: CTTCACCTGCTGGAAGTCCAACCCCAACATCCAGGC...ACCAGTGCTGAACACCCAGGAGGTTGCTGTCCTTTGAGTCAGCTGCGCTGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS-3UTR CAA 90 bp | CTCAGCGCAGCTGACTCAAAGGACAGCAACCTCCTGGGTGTTCAGCACTGGTGGATGAAGGCCTGGATGTaGGGGTTGGACTTCCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: LSAADSKDSNLLGVQHWWMKAWM*GLDFQQ Trigger: CTGCTGGAAGTCCAACCCCAACATCCAGGCCTTCAT...CCACCAGTGCTGAACACCCAGGAGGTTGCTGTCCTTTGAGTCAGCTGCGCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS-3UTR CAA 90 bp | CTCAGCGCAGCTGACTCAAAGGACAGCAACCTCCTGGGTGTTCAGCACTGGTGGGCCAGGGGCTCCACTTaGTACATGTCCTTCCAGTCA | + |
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Preference number: 5 (lower is better) Translates to: LSAADSKDSNLLGVQHWWARGST*YMSFQS Trigger: TGACTGGAAGGACATGTACAAAGTGGAGCCCCTGGC...CCACCAGTGCTGAACACCCAGGAGGTTGCTGTCCTTTGAGTCAGCTGCGCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS TCA 90 bp | TCAGGTACCAGGGAGCAGACAGCAGGGCCCGGAAGCCAGCCCTGGTaGTATCTTGCATCTCCAACATGTACTCTACTGGCATTTCTTCCC | + |
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Preference number: 5 (lower is better) Translates to: SGTREQTAGPGSQPW*YLASPTCTLLAFLP Trigger: GGGAAGAAATGCCAGTAGAGTACATGTTGGAGATGCAAGATATCACCAGGGCTGGCTTCCGGGCCCTGCTGTCTGCTCCCTGGTACCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS-3UTR CAA 90 bp | TGCTCAGCGCAGCTGACTCAAAGGACAGCAACCTCCTGGGTGTTCAGCACTGGTACGTTTGCTGTTTATTaGAGAAGCTGGGTCGGGGCC | + |
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Preference number: 5 (lower is better) Translates to: CSAQLTQRTATSWVFSTGTFAVY*RSWVGA Trigger: GGCCCCGACCCAGCTTCTCAAATAAACAGCAAACGT...ACCAGTGCTGAACACCCAGGAGGTTGCTGTCCTTTGAGTCAGCTGCGCTGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS TCA 90 bp | GACGGAGACCACCAGAATGTTCTTCCCCAACGTTTGCTGTTTATTTaGGAAGCTGGGTCGGGGCCAAGAGCCGGAACCGAAGAGCAGGTT | + |
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Preference number: 5 (lower is better) Translates to: DGDHQNVLPQRLLFI*EAGSGPRAGTEEQV Trigger: AACCTGCTCTTCGGTTCCGGCTCTTGGCCCCGACCCAGCTTCTCAAATAAACAGCAAACGTTGGGGAAGAACATTCTGGTGGTCTCCGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS CCA 90 bp | CCACCAGAATGTTCTTCCCCAACGTTTGCTGTTTATTTGAGAAGCTaGGTCGGGGCCAAGAGCCGGAACCGAAGAGCAGGTTACGGTAGC | + |
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Preference number: 5 (lower is better) Translates to: PPECSSPTFAVYLRS*VGAKSRNRRAGYGS Trigger: GCTACCGTAACCTGCTCTTCGGTTCCGGCTCTTGGCCCCGACCCAGCTTCTCAAATAAACAGCAAACGTTGGGGAAGAACATTCTGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS-3UTR CAA 90 bp | CTCAGCGCAGCTGACTCAAAGGACAGCAACCTCCTGGGTGTTCAGCACTGGTGGAGCCCTGGTGATATCTaGCATCTCCAACATGTACTC | + |
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Preference number: 5 (lower is better) Translates to: LSAADSKDSNLLGVQHWWSPGDI*HLQHVL Trigger: GAGTACATGTTGGAGATGCAAGATATCACCAGGGCT...CCACCAGTGCTGAACACCCAGGAGGTTGCTGTCCTTTGAGTCAGCTGCGCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS-3UTR CAA 90 bp | TGCTCAGCGCAGCTGACTCAAAGGACAGCAACCTCCTGGGTGTTCAGCACTGGTAAGGACTCCAGCTGCTaGAAGTCAGTAAAGCCCTTT | + |
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Preference number: 5 (lower is better) Translates to: CSAQLTQRTATSWVFSTGKDSSC*KSVKPF Trigger: AAAGGGCTTTACTGACTTCAAGCAGCTGGAGTCCTT...ACCAGTGCTGAACACCCAGGAGGTTGCTGTCCTTTGAGTCAGCTGCGCTGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS GCA 90 bp | GCCAGGAGTGTCAAATTCTGCCAGCACACGGATACCCCGAAGCCTTaGGTATTCAATGACCTCCTTCACATCCTGTGCTGTGTAGATGTG | + |
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Preference number: 5 (lower is better) Translates to: ARSVKFCQHTDTPKP*VFNDLLHILCCVDV Trigger: CACATCTACACAGCACAGGATGTGAAGGAGGTCATTGAATACGCAAGGCTTCGGGGTATCCGTGTGCTGGCAGAATTTGACACTCCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS CCA 90 bp | GAAGGACCCCTTTCTGGTGAGCTCTGGGAAAGTGAAGCTCTCATATaGGAAGGAAGAGTCGTCCACCAAGTGCCAGTGGAACACGTTGAA | + |
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Preference number: 5 (lower is better) Translates to: EGPLSGELWESEALI*EGRVVHQVPVEHVE Trigger: TTCAACGTGTTCCACTGGCACTTGGTGGACGACTCTTCCTTCCCATATGAGAGCTTCACTTTCCCAGAGCTCACCAGAAAGGGGTCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS-3UTR CAA 90 bp | CTCAGCGCAGCTGACTCAAAGGACAGCAACCTCCTGGGTGTTCAGCACTGGTGGTGCCAGTGGAACACGTaGAATTTATTGTATGCCATG | + |
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Preference number: 5 (lower is better) Translates to: LSAADSKDSNLLGVQHWWCQWNT*NLLYAM Trigger: CATGGCATACAATAAATTCAACGTGTTCCACTGGCA...CCACCAGTGCTGAACACCCAGGAGGTTGCTGTCCTTTGAGTCAGCTGCGCTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS GCA 90 bp | GATACCCCGAAGCCTTGCGTATTCAATGACCTCCTTCACATCCTGTaGTGTGTAGATGTGAGTGACAGGGTTGAAGGACCCCTTTCTGGT | + |
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Preference number: 5 (lower is better) Translates to: DTPKPCVFNDLLHIL*CVDVSDRVEGPLSG Trigger: ACCAGAAAGGGGTCCTTCAACCCTGTCACTCACATCTACACAGCACAGGATGTGAAGGAGGTCATTGAATACGCAAGGCTTCGGGGTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS CCA 90 bp | TTTATTGTATGCCATGACATCCAGTGTATCCAGGATGCTAGACAATaGCAGGTAATGGCGAGATGTATCCAGCAGTACGCCCCGGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: FIVCHDIQCIQDARQ*QVMARCIQQYAPVR Trigger: CCTCACCGGGGCGTACTGCTGGATACATCTCGCCATTACCTGCCATTGTCTAGCATCCTGGATACACTGGATGTCATGGCATACAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS CCA 90 bp | GAAGCCAGCCCTGGTGATATCTTGCATCTCCAACATGTACTCTACTaGCATTTCTTCCCGCCACACCTGTATGATTGTATCTGGCCGAAC | + |
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Preference number: 5 (lower is better) Translates to: EASPGDILHLQHVLY*HFFPPHLYDCIWPN Trigger: GTTCGGCCAGATACAATCATACAGGTGTGGCGGGAAGAAATGCCAGTAGAGTACATGTTGGAGATGCAAGATATCACCAGGGCTGGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS-3UTR CAA 90 bp | TGCTCAGCGCAGCTGACTCAAAGGACAGCAACCTCCTGGGTGTTCAGCACTGGTAACACGTTGAATTTATaGTATGCCATGACATCCAGT | + |
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Preference number: 5 (lower is better) Translates to: CSAQLTQRTATSWVFSTGNTLNL*YAMTSS Trigger: ACTGGATGTCATGGCATACAATAAATTCAACGTGTT...ACCAGTGCTGAACACCCAGGAGGTTGCTGTCCTTTGAGTCAGCTGCGCTGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS GCA 90 bp | GGGAAAGTGAAGCTCTCATATGGGAAGGAAGAGTCGTCCACCAAGTaGCAGTGGAACACGTTGAATTTATTGTATGCCATGACATCCAGT | + |
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Preference number: 5 (lower is better) Translates to: GKVKLSYGKEESSTK*QWNTLNLLYAMTSS Trigger: ACTGGATGTCATGGCATACAATAAATTCAACGTGTTCCACTGGCACTTGGTGGACGACTCTTCCTTCCCATATGAGAGCTTCACTTTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS GCA 90 bp | ATGGGCTGGGCCTGGATTCCTCTCCTCACCAGCTCACAACGGAAATaGGACAAACGTTTAAAGGCAAAGTCTATATTAGTTGTCAGGTTA | + |
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Preference number: 5 (lower is better) Translates to: MGWAWIPLLTSSQRK*DKRLKAKSILVVRL Trigger: TAACCTGACAACTAATATAGACTTTGCCTTTAAACGTTTGTCGCATTTCCGTTGTGAGCTGGTGAGGAGAGGAATCCAGGCCCAGCCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS CCA 90 bp | GTGAAGCTCTCATATGGGAAGGAAGAGTCGTCCACCAAGTGCCAGTaGAACACGTTGAATTTATTGTATGCCATGACATCCAGTGTATCC | + |
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Preference number: 5 (lower is better) Translates to: VKLSYGKEESSTKCQ*NTLNLLYAMTSSVS Trigger: GGATACACTGGATGTCATGGCATACAATAAATTCAACGTGTTCCACTGGCACTTGGTGGACGACTCTTCCTTCCCATATGAGAGCTTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS GCA 72 bp | GTGGTAGGTTTGGATGTACTGGGGCCACGGCCACAGTaGCGTGGCCAAGCAAGCCAACGCCGCCGCCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: VVGLDVLGPRPQ*RGQASQRRRQQ Trigger: CTGCTGGCGGCGGCGTTGGCTTGCTTGGCCACGGCACTGTGGCCGTGGCCCCAGTACATCCAAACCTACCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS GCA 72 bp | CGTCGAAAGGCCTCGTCGAGGACGACGCAGCCCGCCTaGGCGGCCGAACTGACATGGTACCGGAACTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: RRKASSRTTQPA*AAELTWYRNWK Trigger: CTTCCAGTTCCGGTACCATGTCAGTTCGGCCGCGCAGGCGGGCTGCGTCGTCCTCGACGAGGCCTTTCGACG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS TCA 72 bp | CGTCGAGGACGACGCAGCCCGCCTGCGCGGCCGAACTaGCATGGTACCGGAACTGGAAGTTGTTGGGGTACA | + |
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Preference number: 6 (lower is better) Translates to: RRGRRSPPARPN*HGTGTGSCWGT Trigger: TGTACCCCAACAACTTCCAGTTCCGGTACCATGTCAGTTCGGCCGCGCAGGCGGGCTGCGTCGTCCTCGACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS CCA 72 bp | AGGACGACGCAGCCCGCCTGCGCGGCCGAACTGACATaGTACCGGAACTGGAAGTTGTTGGGGTACAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: RTTQPACAAELT*YRNWKLLGYRV Trigger: CACCCTGTACCCCAACAACTTCCAGTTCCGGTACCATGTCAGTTCGGCCGCGCAGGCGGGCTGCGTCGTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS CCA 72 bp | TACTGCTCCACAGTCTCTCAGCGACGGCACCCGCTCTaGGCCAGAGTCTGGGGACCAGGTTGGTGCTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: YCSTVSQRRHPL*ARVWGPGWCCP Trigger: TGGACAGCACCAACCTGGTCCCCAGACTCTGGCCCAGAGCGGGTGCCGTCGCTGAGAGACTGTGGAGCAGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS CAA 90 bp | CCAGGGAGCAGACAGCAGGGCCCGGAAGCCAGCCCTGGTGATATCTaGCATCTCCAACATGTACTCTACTGGCATTTCTTCCCGCCACAC | + |
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Preference number: 6 (lower is better) Translates to: PGSRQQGPEASPGDI*HLQHVLYWHFFPPH Trigger: GTGTGGCGGGAAGAAATGCCAGTAGAGTACATGTTGGAGATGCAAGATATCACCAGGGCTGGCTTCCGGGCCCTGCTGTCTGCTCCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS GCA 72 bp | CCCCCAGGACAAAGTGTGGCCAGGAGTGTCAAATTCTaGCAGCACACGGATACCCCGAAGCCTTGCGTATTC | + |
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Preference number: 6 (lower is better) Translates to: PPGQSVARSVKF*QHTDTPKPCVF Trigger: GAATACGCAAGGCTTCGGGGTATCCGTGTGCTGGCAGAATTTGACACTCCTGGCCACACTTTGTCCTGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS CAA 90 bp | CGACGGAGACCACCAGAATGTTCTTCCCCAACGTTTGCTGTTTATTaGAGAAGCTGGGTCGGGGCCAAGAGCCGGAACCGAAGAGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: RRRPPECSSPTFAVY*RSWVGAKSRNRRAG Trigger: ACCTGCTCTTCGGTTCCGGCTCTTGGCCCCGACCCAGCTTCTCAAATAAACAGCAAACGTTGGGGAAGAACATTCTGGTGGTCTCCGTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS TCA 72 bp | CCACATACTCTCCCCACATACAGGCCTCCCCTCCAATaGCCAGAGCCTTCTGTTCAGGCGTACCATGAAACG | + |
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Preference number: 6 (lower is better) Translates to: PHTLPTYRPPLQ*PEPSVQAYHET Trigger: CGTTTCATGGTACGCCTGAACAGAAGGCTCTGGTCATTGGAGGGGAGGCCTGTATGTGGGGAGAGTATGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS TCA 72 bp | CCTCCAATGACCAGAGCCTTCTGTTCAGGCGTACCATaGAACGCCAGGGGCTCCACTTTGTACATGTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: PPMTRAFCSGVP*NARGSTLYMSF Trigger: GAAGGACATGTACAAAGTGGAGCCCCTGGCGTTTCATGGTACGCCTGAACAGAAGGCTCTGGTCATTGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS GCA 72 bp | GACAGCAGGGCCCGGAAGCCAGCCCTGGTGATATCTTaGATCTCCAACATGTACTCTACTGGCATTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: DSRARKPALVIS*ISNMYSTGISS Trigger: GGAAGAAATGCCAGTAGAGTACATGTTGGAGATGCAAGATATCACCAGGGCTGGCTTCCGGGCCCTGCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS CCA 72 bp | TGTTCTTCCCCAACGTTTGCTGTTTATTTGAGAAGCTaGGTCGGGGCCAAGAGCCGGAACCGAAGAGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: CSSPTFAVYLRS*VGAKSRNRRAG Trigger: ACCTGCTCTTCGGTTCCGGCTCTTGGCCCCGACCCAGCTTCTCAAATAAACAGCAAACGTTGGGGAAGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS CAA 72 bp | CCACCAGAATGTTCTTCCCCAACGTTTGCTGTTTATTaGAGAAGCTGGGTCGGGGCCAAGAGCCGGAACCGA | + |
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Preference number: 6 (lower is better) Translates to: PPECSSPTFAVY*RSWVGAKSRNR Trigger: TCGGTTCCGGCTCTTGGCCCCGACCCAGCTTCTCAAATAAACAGCAAACGTTGGGGAAGAACATTCTGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS TCA 72 bp | CACCAGAATGTTCTTCCCCAACGTTTGCTGTTTATTTaGGAAGCTGGGTCGGGGCCAAGAGCCGGAACCGAA | + |
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Preference number: 6 (lower is better) Translates to: HQNVLPQRLLFI*EAGSGPRAGTE Trigger: TTCGGTTCCGGCTCTTGGCCCCGACCCAGCTTCTCAAATAAACAGCAAACGTTGGGGAAGAACATTCTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS GCA 72 bp | ACGACGGAGACCACCAGAATGTTCTTCCCCAACGTTTaGTGTTTATTTGAGAAGCTGGGTCGGGGCCAAGAG | + |
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Preference number: 6 (lower is better) Translates to: TTETTRMFFPNV*CLFEKLGRGQE Trigger: CTCTTGGCCCCGACCCAGCTTCTCAAATAAACAGCAAACGTTGGGGAAGAACATTCTGGTGGTCTCCGTCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS GCA 72 bp | GTCAAATTCTGCCAGCACACGGATACCCCGAAGCCTTaGGTATTCAATGACCTCCTTCACATCCTGTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: VKFCQHTDTPKP*VFNDLLHILCC Trigger: ACAGCACAGGATGTGAAGGAGGTCATTGAATACGCAAGGCTTCGGGGTATCCGTGTGCTGGCAGAATTTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS CCA 72 bp | TGCCATGACATCCAGTGTATCCAGGATGCTAGACAATaGCAGGTAATGGCGAGATGTATCCAGCAGTACGCC | + |
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Preference number: 6 (lower is better) Translates to: CHDIQCIQDARQ*QVMARCIQQYA Trigger: GGCGTACTGCTGGATACATCTCGCCATTACCTGCCATTGTCTAGCATCCTGGATACACTGGATGTCATGGCA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS GCA 72 bp | AAGCCTTGCGTATTCAATGACCTCCTTCACATCCTGTaGTGTGTAGATGTGAGTGACAGGGTTGAAGGACCC | + |
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Preference number: 6 (lower is better) Translates to: KPCVFNDLLHIL*CVDVSDRVEGP Trigger: GGGTCCTTCAACCCTGTCACTCACATCTACACAGCACAGGATGTGAAGGAGGTCATTGAATACGCAAGGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS CAA 72 bp | TCAGTAAAGCCCTTTTTCTTCATGAAGGCCTGGATGTaGGGGTTGGACTTCCAGCAGGTGAAGTCGACTTCA | + |
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Preference number: 6 (lower is better) Translates to: SVKPFFFMKAWM*GLDFQQVKSTS Trigger: TGAAGTCGACTTCACCTGCTGGAAGTCCAACCCCAACATCCAGGCCTTCATGAAGAAAAAGGGCTTTACTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS CAA 90 bp | AAGGAAGAGTCGTCCACCAAGTGCCAGTGGAACACGTTGAATTTATaGTATGCCATGACATCCAGTGTATCCAGGATGCTAGACAATGGC | + |
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Preference number: 6 (lower is better) Translates to: KEESSTKCQWNTLNL*YAMTSSVSRMLDNG Trigger: GCCATTGTCTAGCATCCTGGATACACTGGATGTCATGGCATACAATAAATTCAACGTGTTCCACTGGCACTTGGTGGACGACTCTTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS CAA 90 bp | TCATATGGGAAGGAAGAGTCGTCCACCAAGTGCCAGTGGAACACGTaGAATTTATTGTATGCCATGACATCCAGTGTATCCAGGATGCTA | + |
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Preference number: 6 (lower is better) Translates to: SYGKEESSTKCQWNT*NLLYAMTSSVSRML Trigger: TAGCATCCTGGATACACTGGATGTCATGGCATACAATAAATTCAACGTGTTCCACTGGCACTTGGTGGACGACTCTTCCTTCCCATATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS GCA 72 bp | AAGCTCTCATATGGGAAGGAAGAGTCGTCCACCAAGTaGCAGTGGAACACGTTGAATTTATTGTATGCCATG | + |
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Preference number: 6 (lower is better) Translates to: KLSYGKEESSTK*QWNTLNLLYAM Trigger: CATGGCATACAATAAATTCAACGTGTTCCACTGGCACTTGGTGGACGACTCTTCCTTCCCATATGAGAGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS CCA 72 bp | TCATATGGGAAGGAAGAGTCGTCCACCAAGTGCCAGTaGAACACGTTGAATTTATTGTATGCCATGACATCC | + |
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Preference number: 6 (lower is better) Translates to: SYGKEESSTKCQ*NTLNLLYAMTS Trigger: GGATGTCATGGCATACAATAAATTCAACGTGTTCCACTGGCACTTGGTGGACGACTCTTCCTTCCCATATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS CCA 72 bp | CCTGGTGATATCTTGCATCTCCAACATGTACTCTACTaGCATTTCTTCCCGCCACACCTGTATGATTGTATC | + |
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Preference number: 6 (lower is better) Translates to: PGDILHLQHVLY*HFFPPHLYDCI Trigger: GATACAATCATACAGGTGTGGCGGGAAGAAATGCCAGTAGAGTACATGTTGGAGATGCAAGATATCACCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS CAA 72 bp | TCGTCCACCAAGTGCCAGTGGAACACGTTGAATTTATaGTATGCCATGACATCCAGTGTATCCAGGATGCTA | + |
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Preference number: 6 (lower is better) Translates to: SSTKCQWNTLNL*YAMTSSVSRML Trigger: TAGCATCCTGGATACACTGGATGTCATGGCATACAATAAATTCAACGTGTTCCACTGGCACTTGGTGGACGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS CAA 72 bp | AAGGAAGAGTCGTCCACCAAGTGCCAGTGGAACACGTaGAATTTATTGTATGCCATGACATCCAGTGTATCC | + |
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Preference number: 6 (lower is better) Translates to: KEESSTKCQWNT*NLLYAMTSSVS Trigger: GGATACACTGGATGTCATGGCATACAATAAATTCAACGTGTTCCACTGGCACTTGGTGGACGACTCTTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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| CDS TCA 72 bp | TGTACTCTACTGGCATTTCTTCCCGCCACACCTGTATaGTTGTATCTGGCCGAACCTTCACTTTATTATCAA | + |
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Preference number: 6 (lower is better) Translates to: CTLLAFLPATPV*LYLAEPSLYYQ Trigger: TTGATAATAAAGTGAAGGTTCGGCCAGATACAATCATACAGGTGTGGCGGGAAGAAATGCCAGTAGAGTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026262.8 |
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