RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HES5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000048001

Ensembl transcript IDs: ENSMUST00000049621.7

Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGCACAGCCCGCCTGCAGGGTGCTTGCCCAGCAGCAACGGGCCCTaGAGAAAGTCCTCTACGGGCTGGGGTGAGCCAACCCCCGACTCT +
Preference number: 1 (lower is better)
Translates to: GHSPPAGCLPSSNGP*RKSSTGWGEPTPDS
Trigger: AGAGTCGGGGGTTGGCTCACCCCAGCCCGTAGAGGACTTTCTTCAGGGCCCGTTGCTGCTGGGCAAGCACCCTGCAGGCGGGCTGTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000049621.7
3UTR GCA 90 bp GTTCCGCCTTCACAAAAGGCAAATGTGCCCAGGGCACAGCCCGCCTaGAGGGTGCTTGCCCAGCAGCAACGGGCCCTGAAGAAAGTCCTC +
Preference number: 1 (lower is better)
Translates to: VPPSQKANVPRAQPA*RVLAQQQRALKKVL
Trigger: GAGGACTTTCTTCAGGGCCCGTTGCTGCTGGGCAAGCACCCTGCAGGCGGGCTGTGCCCTGGGCACATTTGCCTTTTGTGAAGGCGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049621.7
3UTR TCA 90 bp GTGGACCTTGAGGTGAGGCCCCATGGGCCCTACGCCCACGCAGGCTaGGTGCTTTCCTATGAGGAAACACCTGCAGTTCCGCCTTCACAA +
Preference number: 1 (lower is better)
Translates to: VDLEVRPHGPYAHAG*VLSYEETPAVPPSQ
Trigger: TTGTGAAGGCGGAACTGCAGGTGTTTCCTCATAGGAAAGCACTCAGCCTGCGTGGGCGTAGGGCCCATGGGGCCTCACCTCAAGGTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049621.7
3UTR TCA 90 bp GAGGCCCCATGGGCCCTACGCCCACGCAGGCTGAGTGCTTTCCTATaGGGAAACACCTGCAGTTCCGCCTTCACAAAAGGCAAATGTGCC +
Preference number: 1 (lower is better)
Translates to: EAPWALRPRRLSAFL*GNTCSSAFTKGKCA
Trigger: GGCACATTTGCCTTTTGTGAAGGCGGAACTGCAGGTGTTTCCTCATAGGAAAGCACTCAGCCTGCGTGGGCGTAGGGCCCATGGGGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049621.7
3UTR-3UTR TCA 90 bp GCATCAGACAGCCAAGGCCATGTGGACCTTGAGGTGAGGCCCCATGGGCCCTACCTCTACGGGCTGGGGTaGGCCAACCCCCGACTCTAC +
Preference number: 2 (lower is better)
Translates to: ASDSQGHVDLEVRPHGPYLYGLG*ANPRLY
Trigger: GTAGAGTCGGGGGTTGGCTCACCCCAGCCCGTAGAG...GTAGGGCCCATGGGGCCTCACCTCAAGGTCCACATGGCCTTGGCTGTCTGATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000049621.7
3UTR-3UTR TCA 90 bp CGCGCATCAGACAGCCAAGGCCATGTGGACCTTGAGGTGAGGCCCCATGGGCCCAGCAGCAACGGGCCCTaGAGAAAGTCCTCTACGGGC +
Preference number: 2 (lower is better)
Translates to: RASDSQGHVDLEVRPHGPSSNGP*RKSSTG
Trigger: GCCCGTAGAGGACTTTCTTCAGGGCCCGTTGCTGCT...GGGCCCATGGGGCCTCACCTCAAGGTCCACATGGCCTTGGCTGTCTGATGCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049621.7
3UTR-3UTR CCA 90 bp AGGGCACAGCCCGCCTGCAGGGTGCTTGCCCAGCAGCAACGGGCCCTGAAGAAAACGGGCGGCAGAGGGTaGGCCCTGATTATCCCCAAA +
Preference number: 2 (lower is better)
Translates to: RAQPACRVLAQQQRALKKTGGRG*ALIIPK
Trigger: TTTGGGGATAATCAGGGCCCACCCTCTGCCGCCCGT...TTTCTTCAGGGCCCGTTGCTGCTGGGCAAGCACCCTGCAGGCGGGCTGTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049621.7
3UTR-3UTR GCA 90 bp GGCACAGCCCGCCTGCAGGGTGCTTGCCCAGCAGCAACGGGCCCTGAAGAAAGTAACCTGGGGCTGAACTaGGGCTGGGGAATGTCTTCC +
Preference number: 2 (lower is better)
Translates to: GTARLQGACPAATGPEESNLGLN*GWGMSS
Trigger: GGAAGACATTCCCCAGCCGCAGTTCAGCCCCAGGTT...ACTTTCTTCAGGGCCCGTTGCTGCTGGGCAAGCACCCTGCAGGCGGGCTGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049621.7
3UTR-3UTR CCA 90 bp CGCGCATCAGACAGCCAAGGCCATGTGGACCTTGAGGTGAGGCCCCATGGGCCCGGGCTGAACTGCGGCTaGGGAATGTCTTCCCACATC +
Preference number: 2 (lower is better)
Translates to: RASDSQGHVDLEVRPHGPGLNCG*GMSSHI
Trigger: GATGTGGGAAGACATTCCCCAGCCGCAGTTCAGCCC...GGGCCCATGGGGCCTCACCTCAAGGTCCACATGGCCTTGGCTGTCTGATGCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049621.7
3UTR-3UTR TCA 90 bp ACGCAGGCTGAGTGCTTTCCTATGAGGAAACACCTGCAGTTCCGCCTTCACAAACGGCCAACCTGGGGCTaGACTGCGGCTGGGGAATGT +
Preference number: 2 (lower is better)
Translates to: TQAECFPMRKHLQFRLHKRPTWG*TAAGEC
Trigger: ACATTCCCCAGCCGCAGTTCAGCCCCAGGTTGGCCG...TTTGTGAAGGCGGAACTGCAGGTGTTTCCTCATAGGAAAGCACTCAGCCTGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049621.7
3UTR-3UTR GCA 90 bp TGCTTTCCTATGAGGAAACACCTGCAGTTCCGCCTTCACAAAAGGCAAATGTGCAGCCCGCCTGCAGGGTaGTTGCCCAGCAGCAACGGG +
Preference number: 2 (lower is better)
Translates to: CFPMRKHLQFRLHKRQMCSPPAG*LPSSNG
Trigger: CCCGTTGCTGCTGGGCAAGCACCCTGCAGGCGGGCT...GCACATTTGCCTTTTGTGAAGGCGGAACTGCAGGTGTTTCCTCATAGGAAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049621.7
3UTR-3UTR TCA 90 bp GCCAACCCCCGACTCTACAAATATCATAGAACCCCCGGTGGTGACCAGGAACTTGCAGAGGGTGGGCCCTaGTTATCCCCAAATGACAAC +
Preference number: 2 (lower is better)
Translates to: ANPRLYKYHRTPGGDQELAEGGP*LSPNDN
Trigger: GTTGTCATTTGGGGATAATCAGGGCCCACCCTCTGC...AAGTTCCTGGTCACCACCGGGGGTTCTATGATATTTGTAGAGTCGGGGGTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000049621.7
3UTR-3UTR TCA 90 bp AGGAAACACCTGCAGTTCCGCCTTCACAAAAGGCAAATGTGCCCAGGGCACAGCCTGATTATCCCCAAATaGCAACTCTGCACACACATT +
Preference number: 2 (lower is better)
Translates to: RKHLQFRLHKRQMCPGHSLIIPK*QLCTHI
Trigger: AATGTGTGTGCAGAGTTGTCATTTGGGGATAATCAG...GCTGTGCCCTGGGCACATTTGCCTTTTGTGAAGGCGGAACTGCAGGTGTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049621.7
3UTR TCA 72 bp GCGCATCAGACAGCCAAGGCCATGTGGACCTTGAGGTaGGGCCCCATGGGCCCTACGCCCACGCAGGCTGAG +
Preference number: 3 (lower is better)
Translates to: AHQTAKAMWTLR*GPMGPTPTQAE
Trigger: CTCAGCCTGCGTGGGCGTAGGGCCCATGGGGCCTCACCTCAAGGTCCACATGGCCTTGGCTGTCTGATGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049621.7
3UTR TCA 72 bp CATCGTGGAGACCCCACCCTCCCAGACAGCCCACTGTaGGCGCGCATCAGACAGCCAAGGCCATGTGGACCT +
Preference number: 3 (lower is better)
Translates to: HRGDPTLPDSPL*ARIRQPRPCGP
Trigger: AGGTCCACATGGCCTTGGCTGTCTGATGCGCGCTCACAGTGGGCTGTCTGGGAGGGTGGGGTCTCCACGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049621.7
3UTR GCA 72 bp TCACAAAAGGCAAATGTGCCCAGGGCACAGCCCGCCTaGAGGGTGCTTGCCCAGCAGCAACGGGCCCTGAAG +
Preference number: 3 (lower is better)
Translates to: SQKANVPRAQPA*RVLAQQQRALK
Trigger: CTTCAGGGCCCGTTGCTGCTGGGCAAGCACCCTGCAGGCGGGCTGTGCCCTGGGCACATTTGCCTTTTGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049621.7
3UTR GCA 72 bp CTTCGGAAGAAGGTAGCGGCCAACCTGGGGCTGAACTaGGGCTGGGGAATGTCTTCCCACATCCAGAGGAAC +
Preference number: 3 (lower is better)
Translates to: LRKKVAANLGLN*GWGMSSHIQRN
Trigger: GTTCCTCTGGATGTGGGAAGACATTCCCCAGCCGCAGTTCAGCCCCAGGTTGGCCGCTACCTTCTTCCGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049621.7
3UTR-3UTR CAA 90 bp CAAGGCCATGTGGACCTTGAGGTGAGGCCCCATGGGCCCTACGCCCACGCAGGCCTTCGCAGAAGTCACTaGCTGAAATGCAAACACAAA +
Preference number: 3 (lower is better)
Translates to: QGHVDLEVRPHGPYAHAGLRRSH*LKCKHK
Trigger: TTTGTGTTTGCATTTCAGCAAGTGACTTCTGCGAAG...GCCTGCGTGGGCGTAGGGCCCATGGGGCCTCACCTCAAGGTCCACATGGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049621.7
3UTR TCA 72 bp TGGGCCCTACGCCCACGCAGGCTGAGTGCTTTCCTATaGGGAAACACCTGCAGTTCCGCCTTCACAAAAGGC +
Preference number: 3 (lower is better)
Translates to: WALRPRRLSAFL*GNTCSSAFTKG
Trigger: GCCTTTTGTGAAGGCGGAACTGCAGGTGTTTCCTCATAGGAAAGCACTCAGCCTGCGTGGGCGTAGGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049621.7
3UTR TCA 72 bp ATTAGAAGCCTTCAGAACAGCCTGTGTTCTCCCACATaGCCAAGAGTTCAAATTCTAAGTACAAAATCGTGC +
Preference number: 3 (lower is better)
Translates to: IRSLQNSLCSPT*PRVQILSTKSC
Trigger: GCACGATTTTGTACTTAGAATTTGAACTCTTGGTCATGTGGGAGAACACAGGCTGTTCTGAAGGCTTCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049621.7
CDS-3UTR GCA 90 bp TGGCCAGCCAGCCGGAGGAGGGAGCCTTCGGAAGAAGGTAGCGGCCAACCTGGGGTGTCGCTGGCGGCGTaGAGGGTCAGGAACTGTACC +
Preference number: 4 (lower is better)
Translates to: WPASRRREPSEEGSGQPGVSLAA*RVRNCT
Trigger: GGTACAGTTCCTGACCCTGCACGCCGCCAGCGACAC...CCCAGGTTGGCCGCTACCTTCTTCCGAAGGCTCCCTCCTCCGGCTGGCTGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049621.7
CDS-3UTR CCA 90 bp TGGCCAGCCAGCCGGAGGAGGGAGCCTTCGGAAGAAGGTAGCGGCCAACCTGGGAGCTTGGAGTTGGGCTaGTGCCGCGCGAACTCCTGC +
Preference number: 4 (lower is better)
Translates to: WPASRRREPSEEGSGQPGSLELG*CRANSC
Trigger: GCAGGAGTTCGCGCGGCACCAGCCCAACTCCAAGCT...CCCAGGTTGGCCGCTACCTTCTTCCGAAGGCTCCCTCCTCCGGCTGGCTGGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049621.7
CDS-3UTR CCA 90 bp GAAACACCTGCAGTTCCGCCTTCACAAAAGGCAAATGTGCCCAGGGCACAGCCCCGGGTTGGCGCGAGGTaGAGACCGCAGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: ETPAVPPSQKANVPRAQPRVGAR*RPQQQQ
Trigger: CTGCTGCTGCTGCGGTCTCCACCTCGCGCCAACCCG...GGGCTGTGCCCTGGGCACATTTGCCTTTTGTGAAGGCGGAACTGCAGGTGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049621.7
CDS-3UTR GCA 90 bp TGGCCAGCCAGCCGGAGGAGGGAGCCTTCGGAAGAAGGTAGCGGCCAACCTGGGAGCAGCAGCTTCAGCTaGTCTATGCTGCTGTTGATG +
Preference number: 4 (lower is better)
Translates to: WPASRRREPSEEGSGQPGSSSFS*SMLLLM
Trigger: CATCAACAGCAGCATAGAGCAGCTGAAGCTGCTGCT...CCCAGGTTGGCCGCTACCTTCTTCCGAAGGCTCCCTCCTCCGGCTGGCTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049621.7
CDS-3UTR TCA 90 bp CCCTCCCAGACAGCCCACTGTGAGCGCGCATCAGACAGCCAAGGCCATGTGGACTGTGTTTCAGGTAGCTaGCGGCCATCTCCAGGATGT +
Preference number: 4 (lower is better)
Translates to: PSQTAHCERASDSQGHVDCVSGS*RPSPGC
Trigger: ACATCCTGGAGATGGCCGTCAGCTACCTGAAACACA...GTCCACATGGCCTTGGCTGTCTGATGCGCGCTCACAGTGGGCTGTCTGGGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049621.7
CDS-3UTR CCA 90 bp CGGCAGAGGGTGGGCCCTGATTATCCCCAAATGACAACTCTGCACACACATTCTTCATCTGCGTGTCGCTaGCGGCGTGCAGGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: RQRVGPDYPQMTTLHTHSSSACR*RRAGSG
Trigger: TCCTGACCCTGCACGCCGCCAGCGACACGCAGATGA...AGAATGTGTGTGCAGAGTTGTCATTTGGGGATAATCAGGGCCCACCCTCTGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049621.7
CDS-3UTR GCA 90 bp AGAACCCCCGGTGGTGACCAGGAACTTCGCAGAAGTCACTTGCTGAAATGCAAATTGGAGTTGGGCTGGTaGCGCGCGAACTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RTPGGDQELRRSHLLKCKLELGW*RANSCS
Trigger: GGAGCAGGAGTTCGCGCGGCACCAGCCCAACTCCAA...TTTGCATTTCAGCAAGTGACTTCTGCGAAGTTCCTGGTCACCACCGGGGGTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049621.7
CDS-3UTR TCA 90 bp AGAACCCCCGGTGGTGACCAGGAACTTCGCAGAAGTCACTTGCTGAAATGCAAATTTTCTCCTTGGGACTaGGCATCTCCACCGCCACGG +
Preference number: 4 (lower is better)
Translates to: RTPGGDQELRRSHLLKCKFSPWD*ASPPPR
Trigger: CCGTGGCGGTGGAGATGCTCAGTCCCAAGGAGAAAA...TTTGCATTTCAGCAAGTGACTTCTGCGAAGTTCCTGGTCACCACCGGGGGTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000049621.7
CDS CCA 90 bp GTGGAGACCGCAGCAGCAGCAGCCTTAGCGGAGGAGCGGGCCGGTTaGGGCGCAGCTCCGGGCGCCGGGGGCTCCTTGGCAGGAGCGGCG +
Preference number: 5 (lower is better)
Translates to: VETAAAAALAEERAG*GAAPGAGGSLAGAA
Trigger: CGCCGCTCCTGCCAAGGAGCCCCCGGCGCCCGGAGCTGCGCCCCAACCGGCCCGCTCCTCCGCTAAGGCTGCTGCTGCTGCGGTCTCCAC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049621.7
CDS CCA 90 bp CGCAGCTCCGGGCGCCGGGGGCTCCTTGGCAGGAGCGGCGGGAGCTaGGGGCCGCTGGAAGTGGTAAAGCAGCTTCATCTGCGTGTCGCT +
Preference number: 5 (lower is better)
Translates to: RSSGRRGLLGRSGGS*GPLEVVKQLHLRVA
Trigger: AGCGACACGCAGATGAAGCTGCTTTACCACTTCCAGCGGCCCCCAGCTCCCGCCGCTCCTGCCAAGGAGCCCCCGGCGCCCGGAGCTGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000049621.7
CDS CCA 90 bp GCAGGCACCAGGAGTAGCCCTCGCTGTAGTCCTGGTGCAGGCTCTTaGGGCCGGCGGCCGCGGCGAAGGCTTTGCTGTGTTTCAGGTAGC +
Preference number: 5 (lower is better)
Translates to: AGTRSSPRCSPGAGS*GRRPRRRLCCVSGS
Trigger: GCTACCTGAAACACAGCAAAGCCTTCGCCGCGGCCGCCGGCCCCAAGAGCCTGCACCAGGACTACAGCGAGGGCTACTCCTGGTGCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049621.7
CDS CCA 90 bp CTGGGGGCCGCTGGAAGTGGTAAAGCAGCTTCATCTGCGTGTCGCTaGCGGCGTGCAGGGTCAGGAACTGTACCGCCTCCTGCAGGCACC +
Preference number: 5 (lower is better)
Translates to: LGAAGSGKAASSACR*RRAGSGTVPPPAGT
Trigger: GGTGCCTGCAGGAGGCGGTACAGTTCCTGACCCTGCACGCCGCCAGCGACACGCAGATGAAGCTGCTTTACCACTTCCAGCGGCCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049621.7
CDS-3UTR CAA 90 bp TGGCCAGCCAGCCGGAGGAGGGAGCCTTCGGAAGAAGGTAGCGGCCAACCTGGGAGTCGGTTTTTCTCCTaGGGACTGAGCATCTCCACC +
Preference number: 5 (lower is better)
Translates to: WPASRRREPSEEGSGQPGSRFFS*GLSIST
Trigger: GGTGGAGATGCTCAGTCCCAAGGAGAAAAACCGACT...CCCAGGTTGGCCGCTACCTTCTTCCGAAGGCTCCCTCCTCCGGCTGGCTGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049621.7
CDS GCA 72 bp TCCAGCTTGGAGTTGGGCTGGTGCCGCGCGAACTCCTaGTCCAGCAGCAGCTTCAGCTGCTCTATGCTGCTG +
Preference number: 6 (lower is better)
Translates to: SSLELGWCRANS*SSSSFSCSMLL
Trigger: CAGCAGCATAGAGCAGCTGAAGCTGCTGCTGGAGCAGGAGTTCGCGCGGCACCAGCCCAACTCCAAGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049621.7
CDS CCA 72 bp GCTGGAAGTGGTAAAGCAGCTTCATCTGCGTGTCGCTaGCGGCGTGCAGGGTCAGGAACTGTACCGCCTCCT +
Preference number: 6 (lower is better)
Translates to: AGSGKAASSACR*RRAGSGTVPPP
Trigger: AGGAGGCGGTACAGTTCCTGACCCTGCACGCCGCCAGCGACACGCAGATGAAGCTGCTTTACCACTTCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049621.7
CDS CAA 72 bp TTCTCCACCACCGGCTTCCGCAGTCGGTTTTTCTCCTaGGGACTGAGCATCTCCACCGCCACGGTACTTGGG +
Preference number: 6 (lower is better)
Translates to: FSTTGFRSRFFS*GLSISTATVLG
Trigger: CCCAAGTACCGTGGCGGTGGAGATGCTCAGTCCCAAGGAGAAAAACCGACTGCGGAAGCCGGTGGTGGAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049621.7