Pregenerated sensors for HES2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028940Ensembl transcript IDs: ENSMUST00000030782.2
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGACCAGACTTTGGTCTGCTGCCCACTGTAGGGCAGGTGTGTCCCTaGCGAGGCACCACTTCTTCCAGTCTGGGCTTCTCCTCACCCTGC | + |
|
Preference number: 1 (lower is better) Translates to: RPDFGLLPTVGQVCP*RGTTSSSLGFSSPC Trigger: GCAGGGTGAGGAGAAGCCCAGACTGGAAGAAGTGGTGCCTCGGCAGGGACACACCTGCCCTACAGTGGGCAGCAGACCAAAGTCTGGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR TCA 90 bp | GCCCAGCTGAGCTGGCAGTATATCCAGGCGTGGCTGGAAACACAGTaGCCCATCCTAGCAGGTGTGGCACCAGGCCCAGGTGAGCTTCAA | + |
|
Preference number: 1 (lower is better) Translates to: AQLSWQYIQAWLETQ*PILAGVAPGPGELQ Trigger: TTGAAGCTCACCTGGGCCTGGTGCCACACCTGCTAGGATGGGTCACTGTGTTTCCAGCCACGCCTGGATATACTGCCAGCTCAGCTGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR GCA 90 bp | TGCCTCTGCTTCTCCAGAGTCCCTGCCATTCCAGAGCCTGTGCTCTaGTCCTCCAAAGCCACAGGGAAGCCTCCCTCTTGTCTCACCCTC | + |
|
Preference number: 1 (lower is better) Translates to: CLCFSRVPAIPEPVL*SSKATGKPPSCLTL Trigger: GAGGGTGAGACAAGAGGGAGGCTTCCCTGTGGCTTTGGAGGAGCAGAGCACAGGCTCTGGAATGGCAGGGACTCTGGAGAAGCAGAGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR GCA 90 bp | GGTCCTGCCTCTGCTTCTCCAGAGTCCCTGCCATTCCAGAGCCTGTaGTCTGCTCCTCCAAAGCCACAGGGAAGCCTCCCTCTTGTCTCA | + |
|
Preference number: 1 (lower is better) Translates to: GPASASPESLPFQSL*SAPPKPQGSLPLVS Trigger: TGAGACAAGAGGGAGGCTTCCCTGTGGCTTTGGAGGAGCAGAGCACAGGCTCTGGAATGGCAGGGACTCTGGAGAAGCAGAGGCAGGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR TCA 90 bp | GGAAACACAGTGACCCATCCTAGCAGGTGTGGCACCAGGCCCAGGTaGGCTTCAAGACCAGACTTTGGTCTGCTGCCCACTGTAGGGCAG | + |
|
Preference number: 1 (lower is better) Translates to: GNTVTHPSRCGTRPR*ASRPDFGLLPTVGQ Trigger: CTGCCCTACAGTGGGCAGCAGACCAAAGTCTGGTCTTGAAGCTCACCTGGGCCTGGTGCCACACCTGCTAGGATGGGTCACTGTGTTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR CCA 90 bp | GGTGAGCCTAGGGTAGTGGTTCTCAACCTGTGGGTCGCGACCCCTTaGAGTGGGGGTATGATTCTTCCACAGGGTCATCCGAGGCCATCA | + |
|
Preference number: 1 (lower is better) Translates to: GEPRVVVLNLWVATP*SGGMILPQGHPRPS Trigger: TGATGGCCTCGGATGACCCTGTGGAAGAATCATACCCCCACTCCAAGGGGTCGCGACCCACAGGTTGAGAACCACTACCCTAGGCTCACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR TCA 90 bp | CTGCCTGGATTCAGAGAGGGGTTTACCAGAGAAAGCAGGCAAGGCTaGTGGTGGTCCTGCCTCTGCTTCTCCAGAGTCCCTGCCATTCCA | + |
|
Preference number: 1 (lower is better) Translates to: LPGFREGFTRESRQG*WWSCLCFSRVPAIP Trigger: TGGAATGGCAGGGACTCTGGAGAAGCAGAGGCAGGACCACCATCAGCCTTGCCTGCTTTCTCTGGTAAACCCCTCTCTGAATCCAGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR GCA 90 bp | CCTGCTCAGTGCTCTGAGGAGGCACGGTCAAAGTCCCCAAGCCACTaGTCTGTTCATAAAGACGTCACAAGCCCAGCTGAGCTGGCAGTA | + |
|
Preference number: 1 (lower is better) Translates to: PAQCSEEARSKSPSH*SVHKDVTSPAELAV Trigger: TACTGCCAGCTCAGCTGGGCTTGTGACGTCTTTATGAACAGAGCAGTGGCTTGGGGACTTTGACCGTGCCTCCTCAGAGCACTGAGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR GCA 90 bp | CCTGGTTCCCAGTGCAGACTTGGAAGCAGCTTTGTGGCTAGGCGCTaGAAATCCCCATGGACTTGGAGTGACCCTGGCTCACAAATCCTC | + |
|
Preference number: 1 (lower is better) Translates to: PGSQCRLGSSFVARR*KSPWTWSDPGSQIL Trigger: GAGGATTTGTGAGCCAGGGTCACTCCAAGTCCATGGGGATTTGCAGCGCCTAGCCACAAAGCTGCTTCCAAGTCTGCACTGGGAACCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR TCA 90 bp | GATCAGTGGGAAGGGAAGCCTAGGATTGGAGGAGTTGAACAGGATTaGCTGCCCTGCTGTTCCTTTGCCCTGCTCAGTGCTCTGAGGAGG | + |
|
Preference number: 1 (lower is better) Translates to: DQWEGKPRIGGVEQD*LPCCSFALLSALRR Trigger: CCTCCTCAGAGCACTGAGCAGGGCAAAGGAACAGCAGGGCAGTCAATCCTGTTCAACTCCTCCAATCCTAGGCTTCCCTTCCCACTGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR GCA 90 bp | CCCTGCCGAGGCACCACTTCTTCCAGTCTGGGCTTCTCCTCACCCTaGACATATTTGCTCTTTTTCCTTTGGCCCCATTTCACCCTCTGG | + |
|
Preference number: 1 (lower is better) Translates to: PCRGTTSSSLGFSSP*TYLLFFLWPHFTLW Trigger: CCAGAGGGTGAAATGGGGCCAAAGGAAAAAGAGCAAATATGTGCAGGGTGAGGAGAAGCCCAGACTGGAAGAAGTGGTGCCTCGGCAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR GCA 90 bp | GCACCACTTCTTCCAGTCTGGGCTTCTCCTCACCCTGCACATATTTaGTCTTTTTCCTTTGGCCCCATTTCACCCTCTGGCCGAGCCCTT | + |
|
Preference number: 1 (lower is better) Translates to: APLLPVWASPHPAHI*SFSFGPISPSGRAL Trigger: AAGGGCTCGGCCAGAGGGTGAAATGGGGCCAAAGGAAAAAGAGCAAATATGTGCAGGGTGAGGAGAAGCCCAGACTGGAAGAAGTGGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR CCA 90 bp | CTTGGAAGCAGCTTTGTGGCTAGGCGCTGCAAATCCCCATGGACTTaGAGTGACCCTGGCTCACAAATCCTCCCACTTTCTGTGAAGCAC | + |
|
Preference number: 1 (lower is better) Translates to: LGSSFVARRCKSPWT*SDPGSQILPLSVKH Trigger: GTGCTTCACAGAAAGTGGGAGGATTTGTGAGCCAGGGTCACTCCAAGTCCATGGGGATTTGCAGCGCCTAGCCACAAAGCTGCTTCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR CCA 90 bp | TGCAGACTTGGAAGCAGCTTTGTGGCTAGGCGCTGCAAATCCCCATaGACTTGGAGTGACCCTGGCTCACAAATCCTCCCACTTTCTGTG | + |
|
Preference number: 1 (lower is better) Translates to: CRLGSSFVARRCKSP*TWSDPGSQILPLSV Trigger: CACAGAAAGTGGGAGGATTTGTGAGCCAGGGTCACTCCAAGTCCATGGGGATTTGCAGCGCCTAGCCACAAAGCTGCTTCCAAGTCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR CCA 90 bp | TTGGACAAATATGTGGGTGAGCCTAGGGTAGTGGTTCTCAACCTGTaGGTCGCGACCCCTTGGAGTGGGGGTATGATTCTTCCACAGGGT | + |
|
Preference number: 1 (lower is better) Translates to: LDKYVGEPRVVVLNL*VATPWSGGMILPQG Trigger: ACCCTGTGGAAGAATCATACCCCCACTCCAAGGGGTCGCGACCCACAGGTTGAGAACCACTACCCTAGGCTCACCCACATATTTGTCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR CCA 90 bp | CCCTGCACATATTTGCTCTTTTTCCTTTGGCCCCATTTCACCCTCTaGCCGAGCCCTTCCTTGAAGGTTTCATCACCCAGCCAGGTCACA | + |
|
Preference number: 1 (lower is better) Translates to: PCTYLLFFLWPHFTL*PSPSLKVSSPSQVT Trigger: TGTGACCTGGCTGGGTGATGAAACCTTCAAGGAAGGGCTCGGCCAGAGGGTGAAATGGGGCCAAAGGAAAAAGAGCAAATATGTGCAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR CCA 90 bp | AGTCTGGGCTTCTCCTCACCCTGCACATATTTGCTCTTTTTCCTTTaGCCCCATTTCACCCTCTGGCCGAGCCCTTCCTTGAAGGTTTCA | + |
|
Preference number: 1 (lower is better) Translates to: SLGFSSPCTYLLFFL*PHFTLWPSPSLKVS Trigger: TGAAACCTTCAAGGAAGGGCTCGGCCAGAGGGTGAAATGGGGCCAAAGGAAAAAGAGCAAATATGTGCAGGGTGAGGAGAAGCCCAGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR CCA 90 bp | ACAGGAGGATGTCCCTTTATATTCAAGGAGAAGCCCAGAGCCTCTTaGGTGAGTTTGGGCCAGGGCCAACGATTTCTCAGCCTCTTCTTG | + |
|
Preference number: 1 (lower is better) Translates to: TGGCPFIFKEKPRAS*VSLGQGQRFLSLFL Trigger: CAAGAAGAGGCTGAGAAATCGTTGGCCCTGGCCCAAACTCACCCAAGAGGCTCTGGGCTTCTCCTTGAATATAAAGGGACATCCTCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR TCA 90 bp | TCTTTTTCCTTTGGCCCCATTTCACCCTCTGGCCGAGCCCTTCCTTaGAGGTTTCATCACCCAGCCAGGTCACAGTATCTGATTCTTGAC | + |
|
Preference number: 1 (lower is better) Translates to: SFSFGPISPSGRALP*RFHHPARSQYLILD Trigger: GTCAAGAATCAGATACTGTGACCTGGCTGGGTGATGAAACCTTCAAGGAAGGGCTCGGCCAGAGGGTGAAATGGGGCCAAAGGAAAAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR CCA 90 bp | AGAGTTGCCCCGTTAGGAAGGTTGAGAACCTCTGCTCTAGGAATTTaGAGTGGTGATCTAAGCAAAGGCCAGGCTGTCCAAGGTCCGATA | + |
|
Preference number: 1 (lower is better) Translates to: RVAPLGRLRTSALGI*SGDLSKGQAVQGPI Trigger: TATCGGACCTTGGACAGCCTGGCCTTTGCTTAGATCACCACTCCAAATTCCTAGAGCAGAGGTTCTCAACCTTCCTAACGGGGCAACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR-3UTR TCA 90 bp | CTAGGATTGGAGGAGTTGAACAGGATTGACTGCCCTGCTGTTCCTTTGCCCTGCGCCCATCCAGGTCCCTaGCAGCCGGCAGCAGGTGCC | + |
|
Preference number: 2 (lower is better) Translates to: LGLEELNRIDCPAVPLPCAHPGP*QPAAGA Trigger: GGCACCTGCTGCCGGCTGTCAGGGACCTGGATGGGC...GCAGGGCAAAGGAACAGCAGGGCAGTCAATCCTGTTCAACTCCTCCAATCCTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR-3UTR GCA 90 bp | CCAGAGAAAGCAGGCAAGGCTGATGGTGGTCCTGCCTCTGCTTCTCCAGAGTCCCTTTGCCCTGCTCAGTaGTCTGAGGAGGCACGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: PEKAGKADGGPASASPESLCPAQ*SEEARS Trigger: TGACCGTGCCTCCTCAGAGCACTGAGCAGGGCAAAG...GGACTCTGGAGAAGCAGAGGCAGGACCACCATCAGCCTTGCCTGCTTTCTCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR-3UTR GCA 90 bp | GAGAAAGCAGGCAAGGCTGATGGTGGTCCTGCCTCTGCTTCTCCAGAGTCCCTGGCCCTGCTGTTCCTTTaGCCTGCTCAGTGCTCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: EKAGKADGGPASASPESLALLFL*PAQCSE Trigger: CTCAGAGCACTGAGCAGGGCAAAGGAACAGCAGGGC...CAGGGACTCTGGAGAAGCAGAGGCAGGACCACCATCAGCCTTGCCTGCTTTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR-3UTR GCA 90 bp | GAGAAAGCAGGCAAGGCTGATGGTGGTCCTGCCTCTGCTTCTCCAGAGTCCCTGCCATTCCAGAGCCTGTaGTCTGCTCCTCCAAAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: EKAGKADGGPASASPESLPFQSL*SAPPKP Trigger: TGGCTTTGGAGGAGCAGAGCACAGGCTCTGGAATGG...CAGGGACTCTGGAGAAGCAGAGGCAGGACCACCATCAGCCTTGCCTGCTTTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR-3UTR TCA 90 bp | GACTGTCCCTTCCCTGGTCAGTCTGTCTTCCTGGCTTTAGTGACCTGGTTCCCACGTCACAAGCCCAGCTaGGCTGGCAGTATATCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: DCPFPGQSVFLALVTWFPRHKPS*AGSISR Trigger: CCTGGATATACTGCCAGCTCAGCTGGGCTTGTGACG...TGGGAACCAGGTCACTAAAGCCAGGAAGACAGACTGACCAGGGAAGGGACAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR-3UTR TCA 90 bp | GTCTGTCTTCCTGGCTTTAGTGACCTGGTTCCCAGTGCAGACTTGGAAGCAGCTCCCTGCTCAGTGCTCTaGGGAGGCACGGTCAAAGTC | + |
|
Preference number: 2 (lower is better) Translates to: VCLPGFSDLVPSADLEAAPCSVL*GGTVKV Trigger: GACTTTGACCGTGCCTCCTCAGAGCACTGAGCAGGG...AGCTGCTTCCAAGTCTGCACTGGGAACCAGGTCACTAAAGCCAGGAAGACAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTATATTCAAGGAGAAGCCCAGAGCCTCTTGGGTGAGTTTGGGCCAGGGCCAAGGGCAGGTGTGTCCCTaGCGAGGCACCACTTCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: FIFKEKPRASWVSLGQGQGQVCP*RGTTSS Trigger: GGAAGAAGTGGTGCCTCGGCAGGGACACACCTGCCC...TTGGCCCTGGCCCAAACTCACCCAAGAGGCTCTGGGCTTCTCCTTGAATATAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR CAA 90 bp | GGCACCACTTCTTCCAGTCTGGGCTTCTCCTCACCCTGCACATATTaGCTCTTTTTCCTTTGGCCCCATTTCACCCTCTGGCCGAGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: GTTSSSLGFSSPCTY*LFFLWPHFTLWPSP Trigger: AGGGCTCGGCCAGAGGGTGAAATGGGGCCAAAGGAAAAAGAGCAAATATGTGCAGGGTGAGGAGAAGCCCAGACTGGAAGAAGTGGTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCTGCCTGGATTCAGAGAGGGGTTTACCAGAGAAAGCAGGCAAGGCTGATGGTCCCCATTTCACCCTCTaGCCGAGCCCTTCCTTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: SCLDSERGLPEKAGKADGPHFTL*PSPSLK Trigger: CTTCAAGGAAGGGCTCGGCCAGAGGGTGAAATGGGG...ACCATCAGCCTTGCCTGCTTTCTCTGGTAAACCCCTCTCTGAATCCAGGCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR CAA 90 bp | CCCCTTCTACAGATCAGTGGGAAGGGAAGCCTAGGATTGGAGGAGTaGAACAGGATTGACTGCCCTGCTGTTCCTTTGCCCTGCTCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: PLLQISGKGSLGLEE*NRIDCPAVPLPCSV Trigger: CACTGAGCAGGGCAAAGGAACAGCAGGGCAGTCAATCCTGTTCAACTCCTCCAATCCTAGGCTTCCCTTCCCACTGATCTGTAGAAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR CAA 90 bp | AGTCCACACCCCCTTCTACAGATCAGTGGGAAGGGAAGCCTAGGATaGGAGGAGTTGAACAGGATTGACTGCCCTGCTGTTCCTTTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: SPHPLLQISGKGSLG*EELNRIDCPAVPLP Trigger: GGGCAAAGGAACAGCAGGGCAGTCAATCCTGTTCAACTCCTCCAATCCTAGGCTTCCCTTCCCACTGATCTGTAGAAGGGGGTGTGGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR CAA 90 bp | CAGTCTGGGCTTCTCCTCACCCTGCACATATTTGCTCTTTTTCCTTaGGCCCCATTTCACCCTCTGGCCGAGCCCTTCCTTGAAGGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: QSGLLLTLHIFALFP*APFHPLAEPFLEGF Trigger: GAAACCTTCAAGGAAGGGCTCGGCCAGAGGGTGAAATGGGGCCAAAGGAAAAAGAGCAAATATGTGCAGGGTGAGGAGAAGCCCAGACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR CAA 90 bp | TCAGTCTGTCTTCCTGGCTTTAGTGACCTGGTTCCCAGTGCAGACTaGGAAGCAGCTTTGTGGCTAGGCGCTGCAAATCCCCATGGACTT | + |
|
Preference number: 2 (lower is better) Translates to: SVCLPGFSDLVPSAD*EAALWLGAANPHGL Trigger: AAGTCCATGGGGATTTGCAGCGCCTAGCCACAAAGCTGCTTCCAAGTCTGCACTGGGAACCAGGTCACTAAAGCCAGGAAGACAGACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR CAA 90 bp | GACAGGAGGATGTCCCTTTATATTCAAGGAGAAGCCCAGAGCCTCTaGGGTGAGTTTGGGCCAGGGCCAACGATTTCTCAGCCTCTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: DRRMSLYIQGEAQSL*GEFGPGPTISQPLL Trigger: AAGAAGAGGCTGAGAAATCGTTGGCCCTGGCCCAAACTCACCCAAGAGGCTCTGGGCTTCTCCTTGAATATAAAGGGACATCCTCCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR-3UTR TCA 90 bp | AGCTGCCTGGATTCAGAGAGGGGTTTACCAGAGAAAGCAGGCAAGGCTGATGGTGGAGTTGAACAGGATTaGCTGCCCTGCTGTTCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: SCLDSERGLPEKAGKADGGVEQD*LPCCSF Trigger: AAAGGAACAGCAGGGCAGTCAATCCTGTTCAACTCC...ACCATCAGCCTTGCCTGCTTTCTCTGGTAAACCCCTCTCTGAATCCAGGCAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR-3UTR CCA 90 bp | TATATTCAAGGAGAAGCCCAGAGCCTCTTGGGTGAGTTTGGGCCAGGGCCAACGTTGCTCTTTTTCCTTTaGCCCCATTTCACCCTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: YIQGEAQSLLGEFGPGPTLLFFL*PHFTLW Trigger: CCAGAGGGTGAAATGGGGCCAAAGGAAAAAGAGCAA...CGTTGGCCCTGGCCCAAACTCACCCAAGAGGCTCTGGGCTTCTCCTTGAATATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR-3UTR GCA 90 bp | GACTGTCCCTTCCCTGGTCAGTCTGTCTTCCTGGCTTTAGTGACCTGGTTCCCAGGCTTCTCCTCACCCTaGACATATTTGCTCTTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: DCPFPGQSVFLALVTWFPGFSSP*TYLLFF Trigger: GAAAAAGAGCAAATATGTGCAGGGTGAGGAGAAGCC...TGGGAACCAGGTCACTAAAGCCAGGAAGACAGACTGACCAGGGAAGGGACAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCACTGCTCTGTTCATAAAGACGTCACAAGCCCAGCTGAGCTGGCAGTATATCAAGATGCAGTTGCCATaGAGAACTTCCTTGGTCCGG | + |
|
Preference number: 2 (lower is better) Translates to: ATALFIKTSQAQLSWQYIKMQLP*RTSLVR Trigger: CCGGACCAAGGAAGTTCTCCATGGCAACTGCATCTT...GATATACTGCCAGCTCAGCTGGGCTTGTGACGTCTTTATGAACAGAGCAGTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR-3UTR CCA 90 bp | ACACCCCCTTCTACAGATCAGTGGGAAGGGAAGCCTAGGATTGGAGGAGTTGAATTCAAGACCAGACTTTaGTCTGCTGCCCACTGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: TPPSTDQWEGKPRIGGVEFKTRL*SAAHCR Trigger: CCTACAGTGGGCAGCAGACCAAAGTCTGGTCTTGAA...TTCAACTCCTCCAATCCTAGGCTTCCCTTCCCACTGATCTGTAGAAGGGGGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR-3UTR CCA 90 bp | GTCTGTCTTCCTGGCTTTAGTGACCTGGTTCCCAGTGCAGACTTGGAAGCAGCTCCTTCTACAGATCAGTaGGAAGGGAAGCCTAGGATT | + |
|
Preference number: 2 (lower is better) Translates to: VCLPGFSDLVPSADLEAAPSTDQ*EGKPRI Trigger: AATCCTAGGCTTCCCTTCCCACTGATCTGTAGAAGG...AGCTGCTTCCAAGTCTGCACTGGGAACCAGGTCACTAAAGCCAGGAAGACAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR-3UTR TCA 90 bp | AGCTGCCTGGATTCAGAGAGGGGTTTACCAGAGAAAGCAGGCAAGGCTGATGGTTGTTCTCAAAGTGAGTaGGAAGATGCAGTTGCCATG | + |
|
Preference number: 2 (lower is better) Translates to: SCLDSERGLPEKAGKADGCSQSE*EDAVAM Trigger: CATGGCAACTGCATCTTCTCACTCACTTTGAGAACA...ACCATCAGCCTTGCCTGCTTTCTCTGGTAAACCCCTCTCTGAATCCAGGCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR-3UTR TCA 90 bp | AGCTGCCTGGATTCAGAGAGGGGTTTACCAGAGAAAGCAGGCAAGGCTGATGGTAGACTGTTCTCAAAGTaGGTGAGAAGATGCAGTTGC | + |
|
Preference number: 2 (lower is better) Translates to: SCLDSERGLPEKAGKADGRLFSK*VRRCSC Trigger: GCAACTGCATCTTCTCACTCACTTTGAGAACAGTCT...ACCATCAGCCTTGCCTGCTTTCTCTGGTAAACCCCTCTCTGAATCCAGGCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR-3UTR GCA 90 bp | GAGACAGGAGGATGTCCCTTTATATTCAAGGAGAAGCCCAGAGCCTCTTGGGTGGTGAGAAGATGCAGTTaGCATGGAGAACTTCCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: ETGGCPFIFKEKPRASWVVRRCS*HGELPW Trigger: CCAAGGAAGTTCTCCATGGCAACTGCATCTTCTCAC...CACCCAAGAGGCTCTGGGCTTCTCCTTGAATATAAAGGGACATCCTCCTGTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGAGAGTTCTTATGTGTGGAGACAGGAGGATGTCCCTTTATATTCAAGGAGAACTGAAGGCCCTTCCCTaGGTCTTGATGGGCTTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: LRVLMCGDRRMSLYIQGELKALP*VLMGFQ Trigger: CTGGAAGCCCATCAAGACTCAGGGAAGGGCCTTCAG...TTCTCCTTGAATATAAAGGGACATCCTCCTGTCTCCACACATAAGAACTCTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGAGAGTTCTTATGTGTGGAGACAGGAGGATGTCCCTTTATATTCAAGGAGAATGGCTGGAAACACAGTaGCCCATCCTAGCAGGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: LRVLMCGDRRMSLYIQGEWLETQ*PILAGV Trigger: CACACCTGCTAGGATGGGTCACTGTGTTTCCAGCCA...TTCTCCTTGAATATAAAGGGACATCCTCCTGTCTCCACACATAAGAACTCTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR-3UTR CCA 90 bp | TTAGGAAGGTTGAGAACCTCTGCTCTAGGAATTTGGAGTGGTGATCTAAGCAAAAAATCCCCATGGACTTaGAGTGACCCTGGCTCACAA | + |
|
Preference number: 2 (lower is better) Translates to: LGRLRTSALGIWSGDLSKKSPWT*SDPGSQ Trigger: TTGTGAGCCAGGGTCACTCCAAGTCCATGGGGATTT...TTTGCTTAGATCACCACTCCAAATTCCTAGAGCAGAGGTTCTCAACCTTCCTAA 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR CAA 90 bp | TTGAGGCAGGGTCTCAATCCTCAGGCAAAGATGGCTGAAAACTCATaGTGTAAACAAGTATTGAGAGTTCTTATGTGTGGAGACAGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: LRQGLNPQAKMAENS*CKQVLRVLMCGDRR Trigger: CCTCCTGTCTCCACACATAAGAACTCTCAATACTTGTTTACACAATGAGTTTTCAGCCATCTTTGCCTGAGGATTGAGACCCTGCCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR-3UTR GCA 90 bp | TTAGGAAGGTTGAGAACCTCTGCTCTAGGAATTTGGAGTGGTGATCTAAGCAAACACCCTGCACATATTTaGTCTTTTTCCTTTGGCCCC | + |
|
Preference number: 2 (lower is better) Translates to: LGRLRTSALGIWSGDLSKHPAHI*SFSFGP Trigger: GGGGCCAAAGGAAAAAGAGCAAATATGTGCAGGGTG...TTTGCTTAGATCACCACTCCAAATTCCTAGAGCAGAGGTTCTCAACCTTCCTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR TCA 72 bp | GACTGCCCTGCTGTTCCTTTGCCCTGCTCAGTGCTCTaGGGAGGCACGGTCAAAGTCCCCAAGCCACTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: DCPAVPLPCSVL*GGTVKVPKPLL Trigger: GAGCAGTGGCTTGGGGACTTTGACCGTGCCTCCTCAGAGCACTGAGCAGGGCAAAGGAACAGCAGGGCAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR GCA 72 bp | TTTGGTCTGCTGCCCACTGTAGGGCAGGTGTGTCCCTaGCGAGGCACCACTTCTTCCAGTCTGGGCTTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: FGLLPTVGQVCP*RGTTSSSLGFS Trigger: GGAGAAGCCCAGACTGGAAGAAGTGGTGCCTCGGCAGGGACACACCTGCCCTACAGTGGGCAGCAGACCAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR TCA 72 bp | GAGAACTTCCTTGGTCCGGTAGCCCATCCAGGTCCCTaGCAGCCGGCAGCAGGTGCCTGTGAAATATCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: ENFLGPVAHPGP*QPAAGACEISR Trigger: CCTGGATATTTCACAGGCACCTGCTGCCGGCTGTCAGGGACCTGGATGGGCTACCGGACCAAGGAAGTTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR TCA 72 bp | GTGACCCATCCTAGCAGGTGTGGCACCAGGCCCAGGTaGGCTTCAAGACCAGACTTTGGTCTGCTGCCCACT | + |
|
Preference number: 3 (lower is better) Translates to: VTHPSRCGTRPR*ASRPDFGLLPT Trigger: AGTGGGCAGCAGACCAAAGTCTGGTCTTGAAGCTCACCTGGGCCTGGTGCCACACCTGCTAGGATGGGTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR TCA 72 bp | AGCTGGCAGTATATCCAGGCGTGGCTGGAAACACAGTaGCCCATCCTAGCAGGTGTGGCACCAGGCCCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: SWQYIQAWLETQ*PILAGVAPGPG Trigger: ACCTGGGCCTGGTGCCACACCTGCTAGGATGGGTCACTGTGTTTCCAGCCACGCCTGGATATACTGCCAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR CCA 72 bp | AGTGGTTCTCAACCTGTGGGTCGCGACCCCTTGGAGTaGGGGTATGATTCTTCCACAGGGTCATCCGAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: SGSQPVGRDPLE*GYDSSTGSSEA Trigger: GGCCTCGGATGACCCTGTGGAAGAATCATACCCCCACTCCAAGGGGTCGCGACCCACAGGTTGAGAACCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR TCA 72 bp | GGAGTGACCCTGGCTCACAAATCCTCCCACTTTCTGTaGAGCACCCACTCCTGGGATCTGAAGGCCCTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: GVTLAHKSSHFL*STHSWDLKALP Trigger: GGGAAGGGCCTTCAGATCCCAGGAGTGGGTGCTTCACAGAAAGTGGGAGGATTTGTGAGCCAGGGTCACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR GCA 72 bp | TTCTCCAGAGTCCCTGCCATTCCAGAGCCTGTGCTCTaGTCCTCCAAAGCCACAGGGAAGCCTCCCTCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: FSRVPAIPEPVL*SSKATGKPPSC Trigger: ACAAGAGGGAGGCTTCCCTGTGGCTTTGGAGGAGCAGAGCACAGGCTCTGGAATGGCAGGGACTCTGGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR GCA 72 bp | AGTTTACAGTCTAGGCAACCGGGCCCAGCCCAGCACTaGCGGGAGCCCCCTTCCCTCTTCATCTTTATTGTC | + |
|
Preference number: 3 (lower is better) Translates to: SLQSRQPGPAQH*REPPSLFIFIV Trigger: GACAATAAAGATGAAGAGGGAAGGGGGCTCCCGGCAGTGCTGGGCTGGGCCCGGTTGCCTAGACTGTAAACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR CCA 72 bp | AGGGTAGTGGTTCTCAACCTGTGGGTCGCGACCCCTTaGAGTGGGGGTATGATTCTTCCACAGGGTCATCCG | + |
|
Preference number: 3 (lower is better) Translates to: RVVVLNLWVATP*SGGMILPQGHP Trigger: CGGATGACCCTGTGGAAGAATCATACCCCCACTCCAAGGGGTCGCGACCCACAGGTTGAGAACCACTACCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR-3UTR CAA 90 bp | GACTGTCCCTTCCCTGGTCAGTCTGTCTTCCTGGCTTTAGTGACCTGGTTCCCATGGCCGAGCCCTTCCTaGAAGGTTTCATCACCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: DCPFPGQSVFLALVTWFPWPSPS*KVSSPS Trigger: GCTGGGTGATGAAACCTTCAAGGAAGGGCTCGGCCA...TGGGAACCAGGTCACTAAAGCCAGGAAGACAGACTGACCAGGGAAGGGACAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR GCA 72 bp | CAGTGCAGACTTGGAAGCAGCTTTGTGGCTAGGCGCTaGAAATCCCCATGGACTTGGAGTGACCCTGGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: QCRLGSSFVARR*KSPWTWSDPGS Trigger: TGAGCCAGGGTCACTCCAAGTCCATGGGGATTTGCAGCGCCTAGCCACAAAGCTGCTTCCAAGTCTGCACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR CCA 72 bp | GACCTGGTTCCCAGTGCAGACTTGGAAGCAGCTTTGTaGCTAGGCGCTGCAAATCCCCATGGACTTGGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: DLVPSADLEAAL*LGAANPHGLGV Trigger: CACTCCAAGTCCATGGGGATTTGCAGCGCCTAGCCACAAAGCTGCTTCCAAGTCTGCACTGGGAACCAGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGACAGGAGGATGTCCCTTTATATTCAAGGAGAAGCCCAGAGCCTCTTGGGTGAGGGAAGCCTCCCTCTaGTCTCACCCTCCCCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: ETGGCPFIFKEKPRASWVREASL*SHPPLT Trigger: TGTGAGGGGAGGGTGAGACAAGAGGGAGGCTTCCCT...CACCCAAGAGGCTCTGGGCTTCTCCTTGAATATAAAGGGACATCCTCCTGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR-3UTR CAA 90 bp | TATATTCAAGGAGAAGCCCAGAGCCTCTTGGGTGAGTTTGGGCCAGGGCCAACGGCCCCGTTAGGAAGGTaGAGAACCTCTGCTCTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: YIQGEAQSLLGEFGPGPTAPLGR*RTSALG Trigger: TCCTAGAGCAGAGGTTCTCAACCTTCCTAACGGGGC...CGTTGGCCCTGGCCCAAACTCACCCAAGAGGCTCTGGGCTTCTCCTTGAATATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR TCA 72 bp | TTCAGAGAGGGGTTTACCAGAGAAAGCAGGCAAGGCTaGTGGTGGTCCTGCCTCTGCTTCTCCAGAGTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: FREGFTRESRQG*WWSCLCFSRVP Trigger: AGGGACTCTGGAGAAGCAGAGGCAGGACCACCATCAGCCTTGCCTGCTTTCTCTGGTAAACCCCTCTCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR GCA 72 bp | TGCTCTGAGGAGGCACGGTCAAAGTCCCCAAGCCACTaGTCTGTTCATAAAGACGTCACAAGCCCAGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: CSEEARSKSPSH*SVHKDVTSPAE Trigger: CTCAGCTGGGCTTGTGACGTCTTTATGAACAGAGCAGTGGCTTGGGGACTTTGACCGTGCCTCCTCAGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR CCA 72 bp | TATGTGGGTGAGCCTAGGGTAGTGGTTCTCAACCTGTaGGTCGCGACCCCTTGGAGTGGGGGTATGATTCTT | + |
|
Preference number: 3 (lower is better) Translates to: YVGEPRVVVLNL*VATPWSGGMIL Trigger: AAGAATCATACCCCCACTCCAAGGGGTCGCGACCCACAGGTTGAGAACCACTACCCTAGGCTCACCCACATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR CCA 72 bp | AGCTTTGTGGCTAGGCGCTGCAAATCCCCATGGACTTaGAGTGACCCTGGCTCACAAATCCTCCCACTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: SFVARRCKSPWT*SDPGSQILPLS Trigger: AGAAAGTGGGAGGATTTGTGAGCCAGGGTCACTCCAAGTCCATGGGGATTTGCAGCGCCTAGCCACAAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR CCA 72 bp | TTCCCTGGTCAGTCTGTCTTCCTGGCTTTAGTGACCTaGTTCCCAGTGCAGACTTGGAAGCAGCTTTGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: FPGQSVFLALVT*FPVQTWKQLCG Trigger: GCCACAAAGCTGCTTCCAAGTCTGCACTGGGAACCAGGTCACTAAAGCCAGGAAGACAGACTGACCAGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR-3UTR CAA 90 bp | GACTGTCCCTTCCCTGGTCAGTCTGTCTTCCTGGCTTTAGTGACCTGGTTCCCACTAGGATTGGAGGAGTaGAACAGGATTGACTGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: DCPFPGQSVFLALVTWFPLGLEE*NRIDCP Trigger: AGGGCAGTCAATCCTGTTCAACTCCTCCAATCCTAG...TGGGAACCAGGTCACTAAAGCCAGGAAGACAGACTGACCAGGGAAGGGACAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTATATTCAAGGAGAAGCCCAGAGCCTCTTGGGTGAGTTTGGGCCAGGGCCAAGTTCCCAGTGCAGACTaGGAAGCAGCTTTGTGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: FIFKEKPRASWVSLGQGQVPSAD*EAALWL Trigger: TAGCCACAAAGCTGCTTCCAAGTCTGCACTGGGAAC...TTGGCCCTGGCCCAAACTCACCCAAGAGGCTCTGGGCTTCTCCTTGAATATAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCTGCCTGGATTCAGAGAGGGGTTTACCAGAGAAAGCAGGCAAGGCTGATGGTAGTGAGAAGATGCAGTaGCCATGGAGAACTTCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: SCLDSERGLPEKAGKADGSEKMQ*PWRTSL Trigger: CAAGGAAGTTCTCCATGGCAACTGCATCTTCTCACT...ACCATCAGCCTTGCCTGCTTTCTCTGGTAAACCCCTCTCTGAATCCAGGCAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR-3UTR CAA 90 bp | CGGTCAAAGTCCCCAAGCCACTGCTCTGTTCATAAAGACGTCACAAGCCCAGCTTCACCCTGCACATATTaGCTCTTTTTCCTTTGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: RSKSPSHCSVHKDVTSPASPCTY*LFFLWP Trigger: GGGCCAAAGGAAAAAGAGCAAATATGTGCAGGGTGA...AGCTGGGCTTGTGACGTCTTTATGAACAGAGCAGTGGCTTGGGGACTTTGACCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCACTGCTCTGTTCATAAAGACGTCACAAGCCCAGCTGAGCTGGCAGTATATCTTTGCTCTTTTTCCTTaGGCCCCATTTCACCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: ATALFIKTSQAQLSWQYIFALFP*APFHPL Trigger: CAGAGGGTGAAATGGGGCCAAAGGAAAAAGAGCAAA...GATATACTGCCAGCTCAGCTGGGCTTGTGACGTCTTTATGAACAGAGCAGTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR TCA 72 bp | AAGCAAAGGCCAGGCTGTCCAAGGTCCGATACAGTGTaGGCCAGTCACATGACTCCTTTAATCCATCCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: KQRPGCPRSDTV*ASHMTPLIHPV Trigger: AACAGGATGGATTAAAGGAGTCATGTGACTGGCTCACACTGTATCGGACCTTGGACAGCCTGGCCTTTGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR CCA 72 bp | CCGTTAGGAAGGTTGAGAACCTCTGCTCTAGGAATTTaGAGTGGTGATCTAAGCAAAGGCCAGGCTGTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: PLGRLRTSALGI*SGDLSKGQAVQ Trigger: TTGGACAGCCTGGCCTTTGCTTAGATCACCACTCCAAATTCCTAGAGCAGAGGTTCTCAACCTTCCTAACGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGACAGGAGGATGTCCCTTTATATTCAAGGAGAAGCCCAGAGCCTCTTGGGTGTTTCTCAGCCTCTTCTaGCTCCACCAAGAACAACAA | + |
|
Preference number: 3 (lower is better) Translates to: ETGGCPFIFKEKPRASWVFLSLF*LHQEQQ Trigger: TTGTTGTTCTTGGTGGAGCAAGAAGAGGCTGAGAAA...CACCCAAGAGGCTCTGGGCTTCTCCTTGAATATAAAGGGACATCCTCCTGTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR TCA 72 bp | ACAGGGCAGTTGGAGCTAGACTGTTCTCAAAGTGAGTaGGAAGATGCAGTTGCCATGGAGAACTTCCTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: TGQLELDCSQSE*EDAVAMENFLG Trigger: ACCAAGGAAGTTCTCCATGGCAACTGCATCTTCTCACTCACTTTGAGAACAGTCTAGCTCCAACTGCCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR TCA 72 bp | CTTGACAGGGCAGTTGGAGCTAGACTGTTCTCAAAGTaGGTGAGAAGATGCAGTTGCCATGGAGAACTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LDRAVGARLFSK*VRRCSCHGELP Trigger: AGGAAGTTCTCCATGGCAACTGCATCTTCTCACTCACTTTGAGAACAGTCTAGCTCCAACTGCCCTGTCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR TCA 72 bp | CTTGAAGGTTTCATCACCCAGCCAGGTCACAGTATCTaGTTCTTGACAGGGCAGTTGGAGCTAGACTGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LEGFITQPGHSI*FLTGQLELDCS Trigger: AGAACAGTCTAGCTCCAACTGCCCTGTCAAGAATCAGATACTGTGACCTGGCTGGGTGATGAAACCTTCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR GCA 72 bp | GTTTGGGCCAGGGCCAACGATTTCTCAGCCTCTTCTTaGTCCACCAAGAACAACAAAACAGACTGCATATGT | + |
|
Preference number: 3 (lower is better) Translates to: VWARANDFSASS*STKNNKTDCIC Trigger: ACATATGCAGTCTGTTTTGTTGTTCTTGGTGGAGCAAGAAGAGGCTGAGAAATCGTTGGCCCTGGCCCAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR TCA 72 bp | CAAAGATGGCTGAAAACTCATTGTGTAAACAAGTATTaGGAGTTCTTATGTGTGGAGACAGGAGGATGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: QRWLKTHCVNKY*EFLCVETGGCP Trigger: GGGACATCCTCCTGTCTCCACACATAAGAACTCTCAATACTTGTTTACACAATGAGTTTTCAGCCATCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| CDS-3UTR GCA 90 bp | GGCTTCCGTGGGGTAGAAATAACCTCTGAGCAAGTTTCTGATAGGCCAGCTGCCCGGGCTCCAGGACGCTaGAGGCGGGCAGTACGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GFRGVEITSEQVSDRPAARAPGR*RRAVRG Trigger: CCCGCGTACTGCCCGCCTGCAGCGTCCTGGAGCCCG...GGCAGCTGGCCTATCAGAAACTTGCTCAGAGGTTATTTCTACCCCACGGAAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| CDS-3UTR GCA 90 bp | CCAGAGAAAGCAGGCAAGGCTGATGGTGGTCCTGCCTCTGCTTCTCCAGAGTCCGCGGCTTTAGGTTCTTaGGCAGCTCCGCCGCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PEKAGKADGGPASASPESAALGS*AAPPRP Trigger: AGGACGCGGCGGAGCTGCGCAAGAACCTAAAGCCGC...GGACTCTGGAGAAGCAGAGGCAGGACCACCATCAGCCTTGCCTGCTTTCTCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| CDS-3UTR TCA 90 bp | TTTATATTCAAGGAGAAGCCCAGAGCCTCTTGGGTGAGTTTGGGCCAGGGCCAAGGCTTAGGCTCTCGTTaGTCCGCGCGCGCCGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: FIFKEKPRASWVSLGQGQGLGSR*SARAGA Trigger: AGCGCCGGCGCGCGCGGATCAACGAGAGCCTAAGCC...TTGGCCCTGGCCCAAACTCACCCAAGAGGCTCTGGGCTTCTCCTTGAATATAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| CDS-3UTR GCA 90 bp | CCACACCCCCTTCTACAGATCAGTGGGAAGGGAAGCCTAGGATTGGAGGAGTTGCAAAGGCCCAGGTGCTaGAGAGGAGTACAGGGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: PHPLLQISGKGSLGLEELQRPRC*RGVQGR Trigger: GCGACCCTGTACTCCTCTGCAGCACCTGGGCCTTTG...CAACTCCTCCAATCCTAGGCTTCCCTTCCCACTGATCTGTAGAAGGGGGTGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| CDS-3UTR GCA 90 bp | GAGAAAGCAGGCAAGGCTGATGGTGGTCCTGCCTCTGCTTCTCCAGAGTCCCTGATTCAAAGGCCCAGGTaGTGCAGAGGAGTACAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: EKAGKADGGPASASPESLIQRPR*CRGVQG Trigger: ACCCTGTACTCCTCTGCAGCACCTGGGCCTTTGAAT...CAGGGACTCTGGAGAAGCAGAGGCAGGACCACCATCAGCCTTGCCTGCTTTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| CDS-3UTR GCA 90 bp | ACACCCCCTTCTACAGATCAGTGGGAAGGGAAGCCTAGGATTGGAGGAGTTGAATCCAAAGGCCAGAACTaGCTGGAGGAGGCACCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TPPSTDQWEGKPRIGGVESKGQN*LEEAPA Trigger: CGCCGGTGCCTCCTCCAGGCAGTTCTGGCCTTTGGA...TTCAACTCCTCCAATCCTAGGCTTCCCTTCCCACTGATCTGTAGAAGGGGGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR CAA 72 bp | CTTTGGCCCCATTTCACCCTCTGGCCGAGCCCTTCCTaGAAGGTTTCATCACCCAGCCAGGTCACAGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: LWPHFTLWPSPS*KVSSPSQVTVS Trigger: AGATACTGTGACCTGGCTGGGTGATGAAACCTTCAAGGAAGGGCTCGGCCAGAGGGTGAAATGGGGCCAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR CAA 72 bp | AGTGACCTGGTTCCCAGTGCAGACTTGGAAGCAGCTTaGTGGCTAGGCGCTGCAAATCCCCATGGACTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SDLVPSADLEAA*WLGAANPHGLG Trigger: TCCAAGTCCATGGGGATTTGCAGCGCCTAGCCACAAAGCTGCTTCCAAGTCTGCACTGGGAACCAGGTCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR CAA 72 bp | CCCCTTCTACAGATCAGTGGGAAGGGAAGCCTAGGATaGGAGGAGTTGAACAGGATTGACTGCCCTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PLLQISGKGSLG*EELNRIDCPAV Trigger: AACAGCAGGGCAGTCAATCCTGTTCAACTCCTCCAATCCTAGGCTTCCCTTCCCACTGATCTGTAGAAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| CDS-3UTR CCA 90 bp | TTAGGAAGGTTGAGAACCTCTGCTCTAGGAATTTGGAGTGGTGATCTAAGCAAAAAGGCCAGAACTGCCTaGAGGAGGCACCGGCGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGRLRTSALGIWSGDLSKKARTA*RRHRRR Trigger: TCTCCGCCGGTGCCTCCTCCAGGCAGTTCTGGCCTT...TTTGCTTAGATCACCACTCCAAATTCCTAGAGCAGAGGTTCTCAACCTTCCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR CAA 72 bp | ATGTCCCTTTATATTCAAGGAGAAGCCCAGAGCCTCTaGGGTGAGTTTGGGCCAGGGCCAACGATTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: MSLYIQGEAQSL*GEFGPGPTISQ Trigger: CTGAGAAATCGTTGGCCCTGGCCCAAACTCACCCAAGAGGCTCTGGGCTTCTCCTTGAATATAAAGGGACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| 3UTR CAA 72 bp | GGTCTCAATCCTCAGGCAAAGATGGCTGAAAACTCATaGTGTAAACAAGTATTGAGAGTTCTTATGTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GLNPQAKMAENS*CKQVLRVLMCG Trigger: TCCACACATAAGAACTCTCAATACTTGTTTACACAATGAGTTTTCAGCCATCTTTGCCTGAGGATTGAGACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| CDS GCA 90 bp | GCAGGTGCTCTAGTAGGCGCGCGCTCACTGCGGGCTCCAGGACGCTaGAGGCGGGCAGTACGCGGGCCAGTCGCGCCAGACAGGCTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: AGALVGARSLRAPGR*RRAVRGPVAPDRLG Trigger: ACCGAGCCTGTCTGGCGCGACTGGCCCGCGTACTGCCCGCCTGCAGCGTCCTGGAGCCCGCAGTGAGCGCGCGCCTACTAGAGCACCTGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| CDS GCA 90 bp | AGCGTCAGTGAGGGCGAGTCATCACTGACAGTCCTCTGTCGCAGGTaGTCTAGTAGGCGCGCGCTCACTGCGGGCTCCAGGACGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SVSEGESSLTVLCRR*SSRRALTAGSRTLQ Trigger: CTGCAGCGTCCTGGAGCCCGCAGTGAGCGCGCGCCTACTAGAGCACCTGCGACAGAGGACTGTCAGTGATGACTCGCCCTCACTGACGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| CDS TCA 90 bp | CTGGAGCTGGAGCGGGTGGTAGCGTCAGTGAGGGCGAGTCATCACTaGCAGTCCTCTGTCGCAGGTGCTCTAGTAGGCGCGCGCTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: LELERVVASVRASHH*QSSVAGALVGARSL Trigger: CAGTGAGCGCGCGCCTACTAGAGCACCTGCGACAGAGGACTGTCAGTGATGACTCGCCCTCACTGACGCTACCACCCGCTCCAGCTCCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| CDS-3UTR CAA 90 bp | CGGTCAAAGTCCCCAAGCCACTGCTCTGTTCATAAAGACGTCACAAGCCCAGCTAGCGGCTTTAGGTTCTaGCGCAGCTCCGCCGCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RSKSPSHCSVHKDVTSPASGFRF*RSSAAS Trigger: GGACGCGGCGGAGCTGCGCAAGAACCTAAAGCCGCT...AGCTGGGCTTGTGACGTCTTTATGAACAGAGCAGTGGCTTGGGGACTTTGACCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| CDS GCA 72 bp | CTAGTAGGCGCGCGCTCACTGCGGGCTCCAGGACGCTaGAGGCGGGCAGTACGCGGGCCAGTCGCGCCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: LVGARSLRAPGR*RRAVRGPVAPD Trigger: GTCTGGCGCGACTGGCCCGCGTACTGCCCGCCTGCAGCGTCCTGGAGCCCGCAGTGAGCGCGCGCCTACTAG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| CDS GCA 72 bp | GAGGGCGAGTCATCACTGACAGTCCTCTGTCGCAGGTaGTCTAGTAGGCGCGCGCTCACTGCGGGCTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: EGESSLTVLCRR*SSRRALTAGSR Trigger: CCTGGAGCCCGCAGTGAGCGCGCGCCTACTAGAGCACCTGCGACAGAGGACTGTCAGTGATGACTCGCCCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||
| CDS GCA 72 bp | GGCCCAGGTGCTGCAGAGGAGTACAGGGTCGCAGGCTaGTCCTGTAGGAAGCGCACAGTCATTTCCAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: GPGAAEEYRVAG*SCRKRTVISRM Trigger: CATCCTGGAAATGACTGTGCGCTTCCTACAGGAGCAGCCTGCGACCCTGTACTCCTCTGCAGCACCTGGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030782.2 |
||