Pregenerated sensors for HERPUD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000008429Ensembl transcript IDs: ENSMUST00000008573.9
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TTGCACTGTTATTTAAACCGCTTTCCTAAAGTCAAACCCTCCTTTGCAGCTGGCTGCCACCACAGCATCTaGAGTGGGCTGAGCGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LHCYLNRFPKVKPSFAAGCHHSI*SGLSAG Trigger: CCCTGCGCTCAGCCCACTGCAGATGCTGTGGTGGCA...GCCAGCTGCAAAGGAGGGTTTGACTTTAGGAAAGCGGTTTAAATAACAGTGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR CCA 90 bp | TTGCACTGTTATTTAAACCGCTTTCCTAAAGTCAAACCCTCCTTTGCAGCTGGCCCACAGCATCTGCAGTaGGCTGAGCGCAGGGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: LHCYLNRFPKVKPSFAAGPQHLQ*AERRVH Trigger: GTGTACCCTGCGCTCAGCCCACTGCAGATGCTGTGG...GCCAGCTGCAAAGGAGGGTTTGACTTTAGGAAAGCGGTTTAAATAACAGTGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR GCA 90 bp | TTGCACTGTTATTTAAACCGCTTTCCTAAAGTCAAACCCTCCTTTGCAGCTGGCCCCAGGCCTTTGAGCTaGACTGGCATCTTCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LHCYLNRFPKVKPSFAAGPRPLS*TGIFTC Trigger: GCAGGTGAAGATGCCAGTGCAGCTCAAAGGCCTGGG...GCCAGCTGCAAAGGAGGGTTTGACTTTAGGAAAGCGGTTTAAATAACAGTGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR CCA 90 bp | TTGCACTGTTATTTAAACCGCTTTCCTAAAGTCAAACCCTCCTTTGCAGCTGGCCTTGGGCCACTAGGTTaGGAGCTGGTGGAGGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LHCYLNRFPKVKPSFAAGLGPLG*ELVEAL Trigger: AAGAGCCTCCACCAGCTCCCAACCTAGTGGCCCAAG...GCCAGCTGCAAAGGAGGGTTTGACTTTAGGAAAGCGGTTTAAATAACAGTGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR GCA 90 bp | TTGCACTGTTATTTAAACCGCTTTCCTAAAGTCAAACCCTCCTTTGCAGCTGGCGGTGCTGGATGCCAGTaGTTCGTGACTTCCTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: LHCYLNRFPKVKPSFAAGGAGCQ*FVTSSI Trigger: GATAGAGGAAGTCACGAAGCACTGGCATCCAGCACC...GCCAGCTGCAAAGGAGGGTTTGACTTTAGGAAAGCGGTTTAAATAACAGTGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR CCA 90 bp | TTGCACTGTTATTTAAACCGCTTTCCTAAAGTCAAACCCTCCTTTGCAGCTGGCATGGGCCCATTTTCTTaGGCCACTAGGTTGGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LHCYLNRFPKVKPSFAAGMGPFS*ATRLGA Trigger: AGCTCCCAACCTAGTGGCCCAAGAAAATGGGCCCAT...GCCAGCTGCAAAGGAGGGTTTGACTTTAGGAAAGCGGTTTAAATAACAGTGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR TCA 90 bp | TATTCAAAGTACACATTGAAGGGCTGGCCATCTAGCTATGAACATTTAAAGGTGAGAAGTATACGATGCTaGGGAGGACGGCAGCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: YSKYTLKGWPSSYEHLKVRSIRC*GGRQLG Trigger: CCCGAGCTGCCGTCCTCCTCAGCATCGTATACTTCT...CACCTTTAAATGTTCATAGCTAGATGGCCAGCCCTTCAATGTGTACTTTGAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR TCA 90 bp | TTGCACTGTTATTTAAACCGCTTTCCTAAAGTCAAACCCTCCTTTGCAGCTGGCATTAACCCAGGCCTTTaGGCTGCACTGGCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LHCYLNRFPKVKPSFAAGINPGL*AALASS Trigger: TGAAGATGCCAGTGCAGCTCAAAGGCCTGGGTTAAT...GCCAGCTGCAAAGGAGGGTTTGACTTTAGGAAAGCGGTTTAAATAACAGTGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR GCA 90 bp | TTGCACTGTTATTTAAACCGCTTTCCTAAAGTCAAACCCTCCTTTGCAGCTGGCGGTCAGGAAGCAGTCTaGCAGAATACACCAACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LHCYLNRFPKVKPSFAAGGQEAV*QNTPTS Trigger: AGAGGTTGGTGTATTCTGGCAGACTGCTTCCTGACC...GCCAGCTGCAAAGGAGGGTTTGACTTTAGGAAAGCGGTTTAAATAACAGTGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR CCA 90 bp | TTGCACTGTTATTTAAACCGCTTTCCTAAAGTCAAACCCTCCTTTGCAGCTGGCTCTTTCAGCTGCAGATaGTCAGGAAGCAGTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LHCYLNRFPKVKPSFAAGSFSCR*SGSSLP Trigger: TGGCAGACTGCTTCCTGACCATCTGCAGCTGAAAGA...GCCAGCTGCAAAGGAGGGTTTGACTTTAGGAAAGCGGTTTAAATAACAGTGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR TCA 90 bp | TTGCACTGTTATTTAAACCGCTTTCCTAAAGTCAAACCCTCCTTTGCAGCTGGCGTCAGTCTGTGCTTGTaGAAGGGTACGTTGTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LHCYLNRFPKVKPSFAAGVSLCL*KGTLSQ Trigger: TTGAGACAACGTACCCTTTCACAAGCACAGACTGAC...GCCAGCTGCAAAGGAGGGTTTGACTTTAGGAAAGCGGTTTAAATAACAGTGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR TCA 90 bp | TTGCACTGTTATTTAAACCGCTTTCCTAAAGTCAAACCCTCCTTTGCAGCTGGCAATGACAAACTCTCCTaGCTGGGTGATGGAGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LHCYLNRFPKVKPSFAAGNDKLS*LGDGVV Trigger: AACAACTCCATCACCCAGTCAGGAGAGTTTGTCATT...GCCAGCTGCAAAGGAGGGTTTGACTTTAGGAAAGCGGTTTAAATAACAGTGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR CCA 90 bp | TATTCAAAGTACACATTGAAGGGCTGGCCATCTAGCTATGAACATTTAAAGGTGATCGGTGCTGGATTTTaGAGAACTGGGAGGACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: YSKYTLKGWPSSYEHLKVIGAGF*RTGRTP Trigger: CGGAGTCCTCCCAGTTCTCCAAAATCCAGCACCGAT...CACCTTTAAATGTTCATAGCTAGATGGCCAGCCCTTCAATGTGTACTTTGAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR GCA 90 bp | TATTCAAAGTACACATTGAAGGGCTGGCCATCTAGCTATGAACATTTAAAGGTGCACTGGGCCGCCCTGTaGATTCATTTGAACATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YSKYTLKGWPSSYEHLKVHWAAL*IHLNIL Trigger: GAGAATGTTCAAATGAATGCACAGGGCGGCCCAGTG...CACCTTTAAATGTTCATAGCTAGATGGCCAGCCCTTCAATGTGTACTTTGAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR CCA 90 bp | TATTCAAAGTACACATTGAAGGGCTGGCCATCTAGCTATGAACATTTAAAGGTGTGGATTTTGGAGAACTaGGAGGACTCCGAGAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: YSKYTLKGWPSSYEHLKVWILEN*EDSEKH Trigger: GTGCTTCTCGGAGTCCTCCCAGTTCTCCAAAATCCA...CACCTTTAAATGTTCATAGCTAGATGGCCAGCCCTTCAATGTGTACTTTGAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR CCA 90 bp | TATTCAAAGTACACATTGAAGGGCTGGCCATCTAGCTATGAACATTTAAAGGTGTTCTTCATTCAGCACTaGGCCGCCCTGTGCATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: YSKYTLKGWPSSYEHLKVFFIQH*AALCIH Trigger: ATGAATGCACAGGGCGGCCCAGTGCTGAATGAAGAA...CACCTTTAAATGTTCATAGCTAGATGGCCAGCCCTTCAATGTGTACTTTGAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR CCA 90 bp | TATTCAAAGTACACATTGAAGGGCTGGCCATCTAGCTATGAACATTTAAAGGTGGCCTTTGAGCTGCACTaGCATCTTCACCTGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: YSKYTLKGWPSSYEHLKVAFELH*HLHLHL Trigger: AAGATGCAGGTGAAGATGCCAGTGCAGCTCAAAGGC...CACCTTTAAATGTTCATAGCTAGATGGCCAGCCCTTCAATGTGTACTTTGAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR TCA 90 bp | TATTCAAAGTACACATTGAAGGGCTGGCCATCTAGCTATGAACATTTAAAGGTGTGCCCAGGAAACTGGTaGTCCACATTTCCTTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: YSKYTLKGWPSSYEHLKVCPGNW*STFPWI Trigger: AATCCAAGGAAATGTGGATCACCAGTTTCCTGGGCA...CACCTTTAAATGTTCATAGCTAGATGGCCAGCCCTTCAATGTGTACTTTGAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR GCA 90 bp | TATTCAAAGTACACATTGAAGGGCTGGCCATCTAGCTATGAACATTTAAAGGTGAGGATGTCTTTCAGCTaGAGATGGTCAGGAAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: YSKYTLKGWPSSYEHLKVRMSFS*RWSGSS Trigger: ACTGCTTCCTGACCATCTGCAGCTGAAAGACATCCT...CACCTTTAAATGTTCATAGCTAGATGGCCAGCCCTTCAATGTGTACTTTGAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR GCA 90 bp | TATTCAAAGTACACATTGAAGGGCTGGCCATCTAGCTATGAACATTTAAAGGTGGACTTCCTCTATCGGTaGTGGATTTTGGAGAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: YSKYTLKGWPSSYEHLKVDFLYR*WILENW Trigger: CCAGTTCTCCAAAATCCAGCACCGATAGAGGAAGTC...CACCTTTAAATGTTCATAGCTAGATGGCCAGCCCTTCAATGTGTACTTTGAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR GCA 90 bp | TATTCAAAGTACACATTGAAGGGCTGGCCATCTAGCTATGAACATTTAAAGGTGACTGGCATCTTCACCTaGATCTTCTCCACTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: YSKYTLKGWPSSYEHLKVTGIFT*IFSTLI Trigger: GATGAGAGTGGAGAAGATGCAGGTGAAGATGCCAGT...CACCTTTAAATGTTCATAGCTAGATGGCCAGCCCTTCAATGTGTACTTTGAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR CCA 90 bp | TATTCAAAGTACACATTGAAGGGCTGGCCATCTAGCTATGAACATTTAAAGGTGTTCCTCTATCGGTGCTaGATTTTGGAGAACTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: YSKYTLKGWPSSYEHLKVFLYRC*ILENWE Trigger: CTCCCAGTTCTCCAAAATCCAGCACCGATAGAGGAA...CACCTTTAAATGTTCATAGCTAGATGGCCAGCCCTTCAATGTGTACTTTGAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR TCA 90 bp | TATTCAAAGTACACATTGAAGGGCTGGCCATCTAGCTATGAACATTTAAAGGTGACTCATCTTGTTTTCTaGGGATGTCTTTCAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: YSKYTLKGWPSSYEHLKVTHLVF*GCLSAA Trigger: TGCAGCTGAAAGACATCCTCAGAAAACAAGATGAGT...CACCTTTAAATGTTCATAGCTAGATGGCCAGCCCTTCAATGTGTACTTTGAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR CCA 90 bp | TATTCAAAGTACACATTGAAGGGCTGGCCATCTAGCTATGAACATTTAAAGGTGGAATACACCAACCTCTaGTCCTTTGTCAATGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: YSKYTLKGWPSSYEHLKVEYTNL*SFVNGL Trigger: CAAACCATTGACAAAGGACCAGAGGTTGGTGTATTC...CACCTTTAAATGTTCATAGCTAGATGGCCAGCCCTTCAATGTGTACTTTGAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR TCA 90 bp | TATTCAAAGTACACATTGAAGGGCTGGCCATCTAGCTATGAACATTTAAAGGTGTGGTCACTGTATTTCTaGTTCGGTGCTTTAATGATG | + |
|
Preference number: 4 (lower is better) Translates to: YSKYTLKGWPSSYEHLKVWSLYF*FGALMM Trigger: CATCATTAAAGCACCGAATCAGAAATACAGTGACCA...CACCTTTAAATGTTCATAGCTAGATGGCCAGCCCTTCAATGTGTACTTTGAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR GCA 90 bp | TATTCAAAGTACACATTGAAGGGCTGGCCATCTAGCTATGAACATTTAAAGGTGTACACGTTAGATAGATaGGTTTTTAGTTTCCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: YSKYTLKGWPSSYEHLKVYTLDR*VFSFPT Trigger: CGTGGGGAAACTAAAAACGCATCTATCTAACGTGTA...CACCTTTAAATGTTCATAGCTAGATGGCCAGCCCTTCAATGTGTACTTTGAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR GCA 90 bp | TATTCAAAGTACACATTGAAGGGCTGGCCATCTAGCTATGAACATTTAAAGGTGGTATTTCTGATTCGGTaGTTTAATGATGAGAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: YSKYTLKGWPSSYEHLKVVFLIR*FNDESH Trigger: GTGACTCTCATCATTAAAGCACCGAATCAGAAATAC...CACCTTTAAATGTTCATAGCTAGATGGCCAGCCCTTCAATGTGTACTTTGAATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS CCA 90 bp | CTGCTGCCACCACAGCATCTGCAGTGGGCTGAGCGCAGGGTACACTaGGAACGCAGGGGGCACACCTTGCCCAGGAAACTGGTGATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LLPPQHLQWAERRVH*ERRGHTLPRKLVIH Trigger: GTGGATCACCAGTTTCCTGGGCAAGGTGTGCCCCCTGCGTTCCCAGTGTACCCTGCGCTCAGCCCACTGCAGATGCTGTGGTGGCAGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS TCA 90 bp | ACTGATGAGCGTACATCTGCTGCCACCACAGCATCTGCAGTGGGCTaGGCGCAGGGTACACTGGGAACGCAGGGGGCACACCTTGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TDERTSAATTASAVG*AQGTLGTQGAHLAQ Trigger: CTGGGCAAGGTGTGCCCCCTGCGTTCCCAGTGTACCCTGCGCTCAGCCCACTGCAGATGCTGTGGTGGCAGCAGATGTACGCTCATCAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS CCA 90 bp | ATAATACTGATGAGCGTACATCTGCTGCCACCACAGCATCTGCAGTaGGCTGAGCGCAGGGTACACTGGGAACGCAGGGGGCACACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: IILMSVHLLPPQHLQ*AERRVHWERRGHTL Trigger: CAAGGTGTGCCCCCTGCGTTCCCAGTGTACCCTGCGCTCAGCCCACTGCAGATGCTGTGGTGGCAGCAGATGTACGCTCATCAGTATTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS CCA 90 bp | CACCCAGTCCAGCCAGTCGCGGTTCAAGTCTTCTTCATTCAGCACTaGGCCGCCCTGTGCATTCATTTGAACATTCTCATTCATGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: HPVQPVAVQVFFIQH*AALCIHLNILIHGP Trigger: GGGCCCATGAATGAGAATGTTCAAATGAATGCACAGGGCGGCCCAGTGCTGAATGAAGAAGACTTGAACCGCGACTGGCTGGACTGGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS CCA 90 bp | AGCTGGTGCTGGATGCCAGTGCTTCGTGACTTCCTCTATCGGTGCTaGATTTTGGAGAACTGGGAGGACTCCGAGAAGCACAGACTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SWCWMPVLRDFLYRC*ILENWEDSEKHRLD Trigger: ATCTAGTCTGTGCTTCTCGGAGTCCTCCCAGTTCTCCAAAATCCAGCACCGATAGAGGAAGTCACGAAGCACTGGCATCCAGCACCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS GCA 90 bp | CCAGTCGCGGTTCAAGTCTTCTTCATTCAGCACTGGGCCGCCCTGTaGATTCATTTGAACATTCTCATTCATGGGCCCATTTTCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PVAVQVFFIQHWAAL*IHLNILIHGPIFLG Trigger: GCCCAAGAAAATGGGCCCATGAATGAGAATGTTCAAATGAATGCACAGGGCGGCCCAGTGCTGAATGAAGAAGACTTGAACCGCGACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR CAA 90 bp | TTGCACTGTTATTTAAACCGCTTTCCTAAAGTCAAACCCTCCTTTGCAGCTGGCGGGCTGAGCCGGCACTaGATGTGGCCTGAGCTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LHCYLNRFPKVKPSFAAGGLSRH*MWPELK Trigger: TTTCAGCTCAGGCCACATCAAGTGCCGGCTCAGCCC...GCCAGCTGCAAAGGAGGGTTTGACTTTAGGAAAGCGGTTTAAATAACAGTGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR CAA 90 bp | TTGCACTGTTATTTAAACCGCTTTCCTAAAGTCAAACCCTCCTTTGCAGCTGGCTCTTGGGCCACTAGGTaGGGAGCTGGTGGAGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LHCYLNRFPKVKPSFAAGSWATR*GAGGGS Trigger: AGAGCCTCCACCAGCTCCCAACCTAGTGGCCCAAGA...GCCAGCTGCAAAGGAGGGTTTGACTTTAGGAAAGCGGTTTAAATAACAGTGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS TCA 90 bp | TTATGCCCGTCATTGTTAGCGTCCACATTGTTGGGAGCTTGTTGCTaGCCGCCTTCTTGCCTGAACGGAAACCATCCAGCTTGGTGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: LCPSLLASTLLGACC*PPSCLNGNHPAWCK Trigger: TTTACACCAAGCTGGATGGTTTCCGTTCAGGCAAGAAGGCGGTCAGCAACAAGCTCCCAACAATGTGGACGCTAACAATGACGGGCATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS TCA 90 bp | AAGGTGGTGATAAAAGACCAAGCTGAAGCCATTAACCCAGGCCTTTaGGCTGCACTGGCATCTTCACCTGCATCTTCTCCACTCTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: KVVIKDQAEAINPGL*AALASSPASSPLSS Trigger: AGATGAGAGTGGAGAAGATGCAGGTGAAGATGCCAGTGCAGCTCAAAGGCCTGGGTTAATGGCTTCAGCTTGGTCTTTTATCACCACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS CCA 90 bp | CCAGTGCTTCGTGACTTCCTCTATCGGTGCTGGATTTTGGAGAACTaGGAGGACTCCGAGAAGCACAGACTAGATGAACCATATGATACT | + |
|
Preference number: 5 (lower is better) Translates to: PVLRDFLYRCWILEN*EDSEKHRLDEPYDT Trigger: AGTATCATATGGTTCATCTAGTCTGTGCTTCTCGGAGTCCTCCCAGTTCTCCAAAATCCAGCACCGATAGAGGAAGTCACGAAGCACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR CAA 90 bp | TATTCAAAGTACACATTGAAGGGCTGGCCATCTAGCTATGAACATTTAAAGGTGCGCAGGGGGCACACCTaGCCCAGGAAACTGGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: YSKYTLKGWPSSYEHLKVRRGHT*PRKLVI Trigger: GATCACCAGTTTCCTGGGCAAGGTGTGCCCCCTGCG...CACCTTTAAATGTTCATAGCTAGATGGCCAGCCCTTCAATGTGTACTTTGAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS CCA 90 bp | TTTGAACATTCTCATTCATGGGCCCATTTTCTTGGGCCACTAGGTTaGGAGCTGGTGGAGGCTCTTCTCCAGGAACATGTGCCAAATTTA | + |
|
Preference number: 5 (lower is better) Translates to: FEHSHSWAHFLGPLG*ELVEALLQEHVPNL Trigger: TAAATTTGGCACATGTTCCTGGAGAAGAGCCTCCACCAGCTCCCAACCTAGTGGCCCAAGAAAATGGGCCCATGAATGAGAATGTTCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR CAA 90 bp | TTGCACTGTTATTTAAACCGCTTTCCTAAAGTCAAACCCTCCTTTGCAGCTGGCCACATTGTTGGGAGCTaGTTGCTGACCGCCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LHCYLNRFPKVKPSFAAGHIVGS*LLTAFL Trigger: CAAGAAGGCGGTCAGCAACAAGCTCCCAACAATGTG...GCCAGCTGCAAAGGAGGGTTTGACTTTAGGAAAGCGGTTTAAATAACAGTGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR CAA 90 bp | TATTCAAAGTACACATTGAAGGGCTGGCCATCTAGCTATGAACATTTAAAGGTGTTGCTGACCGCCTTCTaGCCTGAACGGAAACCATCC | + |
|
Preference number: 5 (lower is better) Translates to: YSKYTLKGWPSSYEHLKVLLTAF*PERKPS Trigger: GGATGGTTTCCGTTCAGGCAAGAAGGCGGTCAGCAA...CACCTTTAAATGTTCATAGCTAGATGGCCAGCCCTTCAATGTGTACTTTGAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS GCA 90 bp | CTCTGGTCCTTTGTCAATGGTTTGCTAGGGTACACGTTAGATAGATaGGTTTTTAGTTTCCCCACGGTCCAGTTCAAGAAGCAGCTAATA | + |
|
Preference number: 5 (lower is better) Translates to: LWSFVNGLLGYTLDR*VFSFPTVQFKKQLI Trigger: TATTAGCTGCTTCTTGAACTGGACCGTGGGGAAACTAAAAACGCATCTATCTAACGTGTACCCTAGCAAACCATTGACAAAGGACCAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR CAA 90 bp | TATTCAAAGTACACATTGAAGGGCTGGCCATCTAGCTATGAACATTTAAAGGTGTATCGGTGCTGGATTTaGGAGAACTGGGAGGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: YSKYTLKGWPSSYEHLKVYRCWI*ENWEDS Trigger: GGAGTCCTCCCAGTTCTCCAAAATCCAGCACCGATA...CACCTTTAAATGTTCATAGCTAGATGGCCAGCCCTTCAATGTGTACTTTGAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR CAA 90 bp | TATTCAAAGTACACATTGAAGGGCTGGCCATCTAGCTATGAACATTTAAAGGTGATTGTTGGGAGCTTGTaGCTGACCGCCTTCTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: YSKYTLKGWPSSYEHLKVIVGSL*LTAFLP Trigger: AGGCAAGAAGGCGGTCAGCAACAAGCTCCCAACAAT...CACCTTTAAATGTTCATAGCTAGATGGCCAGCCCTTCAATGTGTACTTTGAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS GCA 90 bp | GTTCAAGAAGCAGCTAATAGTCTGGTCACTGTATTTCTGATTCGGTaGTTTAATGATGAGAGTCACAGGAATCTCCATCCCACTTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VQEAANSLVTVFLIR*FNDESHRNLHPTLV Trigger: GACCAAAGTGGGATGGAGATTCCTGTGACTCTCATCATTAAAGCACCGAATCAGAAATACAGTGACCAGACTATTAGCTGCTTCTTGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR CAA 90 bp | TATTCAAAGTACACATTGAAGGGCTGGCCATCTAGCTATGAACATTTAAAGGTGGACTGGGTGATGGAGTaGTTGAATCCGAATGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: YSKYTLKGWPSSYEHLKVDWVME*LNPNGL Trigger: CAGACCATTCGGATTCAACAACTCCATCACCCAGTC...CACCTTTAAATGTTCATAGCTAGATGGCCAGCCCTTCAATGTGTACTTTGAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR CAA 90 bp | TTGCACTGTTATTTAAACCGCTTTCCTAAAGTCAAACCCTCCTTTGCAGCTGGCTCTTCAAGTTCTAGATaGTTTGCATTATGCCCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LHCYLNRFPKVKPSFAAGSSSSR*FALCPS Trigger: TGACGGGCATAATGCAAACAATCTAGAACTTGAAGA...GCCAGCTGCAAAGGAGGGTTTGACTTTAGGAAAGCGGTTTAAATAACAGTGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR CAA 90 bp | TATTCAAAGTACACATTGAAGGGCTGGCCATCTAGCTATGAACATTTAAAGGTGTGGGTGATGGAGTTGTaGAATCCGAATGGTCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: YSKYTLKGWPSSYEHLKVWVMEL*NPNGLN Trigger: ATTCAGACCATTCGGATTCAACAACTCCATCACCCA...CACCTTTAAATGTTCATAGCTAGATGGCCAGCCCTTCAATGTGTACTTTGAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR CAA 90 bp | TTGCACTGTTATTTAAACCGCTTTCCTAAAGTCAAACCCTCCTTTGCAGCTGGCAACTGCAGCTTGATATaGCATATAATACTGATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LHCYLNRFPKVKPSFAAGNCSLI*HIILMS Trigger: GCTCATCAGTATTATATGCAATATCAAGCTGCAGTT...GCCAGCTGCAAAGGAGGGTTTGACTTTAGGAAAGCGGTTTAAATAACAGTGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR CAA 90 bp | TATTCAAAGTACACATTGAAGGGCTGGCCATCTAGCTATGAACATTTAAAGGTGGCCCTGTGCATTCATTaGAACATTCTCATTCATGGG | + |
|
Preference number: 5 (lower is better) Translates to: YSKYTLKGWPSSYEHLKVALCIH*NILIHG Trigger: CCCATGAATGAGAATGTTCAAATGAATGCACAGGGC...CACCTTTAAATGTTCATAGCTAGATGGCCAGCCCTTCAATGTGTACTTTGAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS-3UTR CAA 90 bp | TATTCAAAGTACACATTGAAGGGCTGGCCATCTAGCTATGAACATTTAAAGGTGGTGATCCACATTTCCTaGGATTACATATGGAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: YSKYTLKGWPSSYEHLKVVIHIS*DYIWKL Trigger: CAGTTTCCATATGTAATCCAAGGAAATGTGGATCAC...CACCTTTAAATGTTCATAGCTAGATGGCCAGCCCTTCAATGTGTACTTTGAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS CCA 72 bp | CCACAGCATCTGCAGTGGGCTGAGCGCAGGGTACACTaGGAACGCAGGGGGCACACCTTGCCCAGGAAACTG | + |
|
Preference number: 6 (lower is better) Translates to: PQHLQWAERRVH*ERRGHTLPRKL Trigger: CAGTTTCCTGGGCAAGGTGTGCCCCCTGCGTTCCCAGTGTACCCTGCGCTCAGCCCACTGCAGATGCTGTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS CAA 72 bp | GAGCGCAGGGTACACTGGGAACGCAGGGGGCACACCTaGCCCAGGAAACTGGTGATCCACATTTCCTTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: ERRVHWERRGHT*PRKLVIHISLD Trigger: ATCCAAGGAAATGTGGATCACCAGTTTCCTGGGCAAGGTGTGCCCCCTGCGTTCCCAGTGTACCCTGCGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS CAA 90 bp | CAGTGGGCTGAGCGCAGGGTACACTGGGAACGCAGGGGGCACACCTaGCCCAGGAAACTGGTGATCCACATTTCCTTGGATTACATATGG | + |
|
Preference number: 6 (lower is better) Translates to: QWAERRVHWERRGHT*PRKLVIHISLDYIW Trigger: CCATATGTAATCCAAGGAAATGTGGATCACCAGTTTCCTGGGCAAGGTGTGCCCCCTGCGTTCCCAGTGTACCCTGCGCTCAGCCCACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS GCA 72 bp | TGCTGGATGCCAGTGCTTCGTGACTTCCTCTATCGGTaGTGGATTTTGGAGAACTGGGAGGACTCCGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: CWMPVLRDFLYR*WILENWEDSEK Trigger: CTTCTCGGAGTCCTCCCAGTTCTCCAAAATCCAGCACCGATAGAGGAAGTCACGAAGCACTGGCATCCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS CCA 72 bp | TGGATGCCAGTGCTTCGTGACTTCCTCTATCGGTGCTaGATTTTGGAGAACTGGGAGGACTCCGAGAAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: WMPVLRDFLYRC*ILENWEDSEKH Trigger: GTGCTTCTCGGAGTCCTCCCAGTTCTCCAAAATCCAGCACCGATAGAGGAAGTCACGAAGCACTGGCATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS CCA 72 bp | TCTCATTCATGGGCCCATTTTCTTGGGCCACTAGGTTaGGAGCTGGTGGAGGCTCTTCTCCAGGAACATGTG | + |
|
Preference number: 6 (lower is better) Translates to: SHSWAHFLGPLG*ELVEALLQEHV Trigger: CACATGTTCCTGGAGAAGAGCCTCCACCAGCTCCCAACCTAGTGGCCCAAGAAAATGGGCCCATGAATGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS CAA 72 bp | CCCGTCATTGTTAGCGTCCACATTGTTGGGAGCTTGTaGCTGACCGCCTTCTTGCCTGAACGGAAACCATCC | + |
|
Preference number: 6 (lower is better) Translates to: PVIVSVHIVGSL*LTAFLPERKPS Trigger: GGATGGTTTCCGTTCAGGCAAGAAGGCGGTCAGCAACAAGCTCCCAACAATGTGGACGCTAACAATGACGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS CAA 72 bp | TTCTCATTCATGGGCCCATTTTCTTGGGCCACTAGGTaGGGAGCTGGTGGAGGCTCTTCTCCAGGAACATGT | + |
|
Preference number: 6 (lower is better) Translates to: FSFMGPFSWATR*GAGGGSSPGTC Trigger: ACATGTTCCTGGAGAAGAGCCTCCACCAGCTCCCAACCTAGTGGCCCAAGAAAATGGGCCCATGAATGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS CAA 72 bp | ATGCCCGTCATTGTTAGCGTCCACATTGTTGGGAGCTaGTTGCTGACCGCCTTCTTGCCTGAACGGAAACCA | + |
|
Preference number: 6 (lower is better) Translates to: MPVIVSVHIVGS*LLTAFLPERKP Trigger: TGGTTTCCGTTCAGGCAAGAAGGCGGTCAGCAACAAGCTCCCAACAATGTGGACGCTAACAATGACGGGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS CAA 90 bp | TGCATTATGCCCGTCATTGTTAGCGTCCACATTGTTGGGAGCTTGTaGCTGACCGCCTTCTTGCCTGAACGGAAACCATCCAGCTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: CIMPVIVSVHIVGSL*LTAFLPERKPSSLV Trigger: CACCAAGCTGGATGGTTTCCGTTCAGGCAAGAAGGCGGTCAGCAACAAGCTCCCAACAATGTGGACGCTAACAATGACGGGCATAATGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS CAA 90 bp | GTTTGCATTATGCCCGTCATTGTTAGCGTCCACATTGTTGGGAGCTaGTTGCTGACCGCCTTCTTGCCTGAACGGAAACCATCCAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VCIMPVIVSVHIVGS*LLTAFLPERKPSSL Trigger: CAAGCTGGATGGTTTCCGTTCAGGCAAGAAGGCGGTCAGCAACAAGCTCCCAACAATGTGGACGCTAACAATGACGGGCATAATGCAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS TCA 72 bp | TCATTGTTAGCGTCCACATTGTTGGGAGCTTGTTGCTaGCCGCCTTCTTGCCTGAACGGAAACCATCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SLLASTLLGACC*PPSCLNGNHPA Trigger: AGCTGGATGGTTTCCGTTCAGGCAAGAAGGCGGTCAGCAACAAGCTCCCAACAATGTGGACGCTAACAATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS CCA 72 bp | CGTGACTTCCTCTATCGGTGCTGGATTTTGGAGAACTaGGAGGACTCCGAGAAGCACAGACTAGATGAACCA | + |
|
Preference number: 6 (lower is better) Translates to: RDFLYRCWILEN*EDSEKHRLDEP Trigger: TGGTTCATCTAGTCTGTGCTTCTCGGAGTCCTCCCAGTTCTCCAAAATCCAGCACCGATAGAGGAAGTCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS GCA 72 bp | GGATGTCTTTCAGCTGCAGATGGTCAGGAAGCAGTCTaGCAGAATACACCAACCTCTGGTCCTTTGTCAATG | + |
|
Preference number: 6 (lower is better) Translates to: GCLSAADGQEAV*QNTPTSGPLSM Trigger: CATTGACAAAGGACCAGAGGTTGGTGTATTCTGGCAGACTGCTTCCTGACCATCTGCAGCTGAAAGACATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS CCA 72 bp | CAGCCAGTCGCGGTTCAAGTCTTCTTCATTCAGCACTaGGCCGCCCTGTGCATTCATTTGAACATTCTCATT | + |
|
Preference number: 6 (lower is better) Translates to: QPVAVQVFFIQH*AALCIHLNILI Trigger: AATGAGAATGTTCAAATGAATGCACAGGGCGGCCCAGTGCTGAATGAAGAAGACTTGAACCGCGACTGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS CCA 72 bp | AAGCTGAAGCCATTAACCCAGGCCTTTGAGCTGCACTaGCATCTTCACCTGCATCTTCTCCACTCTCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: KLKPLTQAFELH*HLHLHLLHSHL Trigger: AAGATGAGAGTGGAGAAGATGCAGGTGAAGATGCCAGTGCAGCTCAAAGGCCTGGGTTAATGGCTTCAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS CAA 90 bp | CCAAATTTAGAGGTGATGATGCAGCACGCTGGGCTGAGCCGGCACTaGATGTGGCCTGAGCTGAAACTGCAGCTTGATATTGCATATAAT | + |
|
Preference number: 6 (lower is better) Translates to: PNLEVMMQHAGLSRH*MWPELKLQLDIAYN Trigger: ATTATATGCAATATCAAGCTGCAGTTTCAGCTCAGGCCACATCAAGTGCCGGCTCAGCCCAGCGTGCTGCATCATCACCTCTAAATTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS TCA 72 bp | CATTGTTGGGAGCTTGTTGCTGACCGCCTTCTTGCCTaGACGGAAACCATCCAGCTTGGTGTAAATAAACCA | + |
|
Preference number: 6 (lower is better) Translates to: HCWELVADRLLA*TETIQLGVNKP Trigger: TGGTTTATTTACACCAAGCTGGATGGTTTCCGTTCAGGCAAGAAGGCGGTCAGCAACAAGCTCCCAACAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS TCA 72 bp | ATAAAAGACCAAGCTGAAGCCATTAACCCAGGCCTTTaGGCTGCACTGGCATCTTCACCTGCATCTTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: IKDQAEAINPGL*AALASSPASSP Trigger: TGGAGAAGATGCAGGTGAAGATGCCAGTGCAGCTCAAAGGCCTGGGTTAATGGCTTCAGCTTGGTCTTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS CCA 72 bp | TGGTCAGGAAGCAGTCTGCCAGAATACACCAACCTCTaGTCCTTTGTCAATGGTTTGCTAGGGTACACGTTA | + |
|
Preference number: 6 (lower is better) Translates to: WSGSSLPEYTNL*SFVNGLLGYTL Trigger: TAACGTGTACCCTAGCAAACCATTGACAAAGGACCAGAGGTTGGTGTATTCTGGCAGACTGCTTCCTGACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS GCA 72 bp | GTTCAAGTCTTCTTCATTCAGCACTGGGCCGCCCTGTaGATTCATTTGAACATTCTCATTCATGGGCCCATT | + |
|
Preference number: 6 (lower is better) Translates to: VQVFFIQHWAAL*IHLNILIHGPI Trigger: AATGGGCCCATGAATGAGAATGTTCAAATGAATGCACAGGGCGGCCCAGTGCTGAATGAAGAAGACTTGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS CCA 72 bp | TCATCTTGTTTTCTGAGGATGTCTTTCAGCTGCAGATaGTCAGGAAGCAGTCTGCCAGAATACACCAACCTC | + |
|
Preference number: 6 (lower is better) Translates to: SSCFLRMSFSCR*SGSSLPEYTNL Trigger: GAGGTTGGTGTATTCTGGCAGACTGCTTCCTGACCATCTGCAGCTGAAAGACATCCTCAGAAAACAAGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS GCA 72 bp | GCAGCTAATAGTCTGGTCACTGTATTTCTGATTCGGTaGTTTAATGATGAGAGTCACAGGAATCTCCATCCC | + |
|
Preference number: 6 (lower is better) Translates to: AANSLVTVFLIR*FNDESHRNLHP Trigger: GGGATGGAGATTCCTGTGACTCTCATCATTAAAGCACCGAATCAGAAATACAGTGACCAGACTATTAGCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS GCA 72 bp | CGCTCCATTTCTTCAAGTTCTAGATTGTTTGCATTATaGCCGTCATTGTTAGCGTCCACATTGTTGGGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: RSISSSSRLFAL*PSLLASTLLGA Trigger: AGCTCCCAACAATGTGGACGCTAACAATGACGGGCATAATGCAAACAATCTAGAACTTGAAGAAATGGAGCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS GCA 72 bp | TTTGTCAATGGTTTGCTAGGGTACACGTTAGATAGATaGGTTTTTAGTTTCCCCACGGTCCAGTTCAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: FVNGLLGYTLDR*VFSFPTVQFKK Trigger: CTTCTTGAACTGGACCGTGGGGAAACTAAAAACGCATCTATCTAACGTGTACCCTAGCAAACCATTGACAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||
| CDS CAA 72 bp | TCATCCATAAGGCGCTCCATTTCTTCAAGTTCTAGATaGTTTGCATTATGCCCGTCATTGTTAGCGTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: SSIRRSISSSSR*FALCPSLLAST Trigger: TGTGGACGCTAACAATGACGGGCATAATGCAAACAATCTAGAACTTGAAGAAATGGAGCGCCTTATGGATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008573.9 |
||