Pregenerated sensors for HERPUD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031770Ensembl transcript IDs: ENSMUST00000034220.8, ENSMUST00000159450.2, ENSMUST00000161085.8, ENSMUST00000161576.8, ENSMUST00000211982.2
Found 178 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GACAACCGCTTGAGCAGCTGCATTCTGATTGGCCGGCTGGTTTTCTaGCGGAAACTGGTTGTGTATAGGAGCCGGAGCAGGTGTAGAGAC | + |
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Preference number: 1 (lower is better) Translates to: DNRLSSCILIGRLVF*RKLVVYRSRSRCRD Trigger: GTCTCTACACCTGCTCCGGCTCCTATACACAACCAGTTTCCGGCAGAAAACCAGCCGGCCAATCAGAATGCAGCTGCTCAAGCGGTTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161085.8 |
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| 3UTR GCA 90 bp | CCGCAAGTTCTGATTGGCTCCGGGATTGACAACCGCTTGAGCAGCTaGATTCTGATTGGCCGGCTGGTTTTCTGCCGGAAACTGGTTGTG | + |
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Preference number: 1 (lower is better) Translates to: PQVLIGSGIDNRLSS*ILIGRLVFCRKLVV Trigger: CACAACCAGTTTCCGGCAGAAAACCAGCCGGCCAATCAGAATGCAGCTGCTCAAGCGGTTGTCAATCCCGGAGCCAATCAGAACTTGCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161085.8 |
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| 3UTR TCA 90 bp | GGCCACCTTGTGCATTCATCCGCAAGTTCTGATTGGCTCCGGGATTaGCAACCGCTTGAGCAGCTGCATTCTGATTGGCCGGCTGGTTTT | + |
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Preference number: 1 (lower is better) Translates to: GHLVHSSASSDWLRD*QPLEQLHSDWPAGF Trigger: AAAACCAGCCGGCCAATCAGAATGCAGCTGCTCAAGCGGTTGTCAATCCCGGAGCCAATCAGAACTTGCGGATGAATGCACAAGGTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161085.8 |
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| 3UTR GCA 90 bp | GTCTCGGTTTATCTCATCATCTTCCTCCACCAGGGGGCCACCTTGTaGATTCATCCGCAAGTTCTGATTGGCTCCGGGATTGACAACCGC | + |
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Preference number: 1 (lower is better) Translates to: VSVYLIIFLHQGATL*IHPQVLIGSGIDNR Trigger: GCGGTTGTCAATCCCGGAGCCAATCAGAACTTGCGGATGAATGCACAAGGTGGCCCCCTGGTGGAGGAAGATGATGAGATAAACCGAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161085.8 |
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| 3UTR TCA 90 bp | CTTTGCCGTAAACCATCACTTGAGGAGTCCCCAGGATGCTGTGTCTaGTTAGAGTTGTCCGGCTGCTCTGTGGATTCAGCACCCTTTGTG | + |
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Preference number: 1 (lower is better) Translates to: LCRKPSLEESPGCCV*LELSGCSVDSAPFV Trigger: CACAAAGGGTGCTGAATCCACAGAGCAGCCGGACAACTCTAATCAGACACAGCATCCTGGGGACTCCTCAAGTGATGGTTTACGGCAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159450.2 |
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| 3UTR GCA 90 bp | CCCTGTTCAGTTTGTACCACGGCTTCATGTCTTAGTTTGTGCTTTTaGTTGGCACAGAAGCACATGTCATCCTGTGGGTTTTCAATGACT | + |
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Preference number: 1 (lower is better) Translates to: PCSVCTTASCLSLCF*LAQKHMSSCGFSMT Trigger: AGTCATTGAAAACCCACAGGATGACATGTGCTTCTGTGCCAAGCAAAAGCACAAACTAAGACATGAAGCCGTGGTACAAACTGAACAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
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| 3UTR GCA 90 bp | TTGAACATTCCAACAGGAATCAAATCGAACCAGCAGAACCGTTTCTaGATCTATGACTTCCATGTAGAGCACACATGCACACACGTCTAT | + |
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Preference number: 1 (lower is better) Translates to: LNIPTGIKSNQQNRF*IYDFHVEHTCTHVY Trigger: ATAGACGTGTGTGCATGTGTGCTCTACATGGAAGTCATAGATGCAGAAACGGTTCTGCTGGTTCGATTTGATTCCTGTTGGAATGTTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
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| 3UTR CAA 90 bp | CAGCCACCCATACGTTGTGTAGCCAGAGAAGCCAGGCCCCAGGCCTaGGAAAGTCTGCTGGACAGCCTCAGGCCTAGAGATGTTCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: QPPIRCVAREARPQA*ESLLDSLRPRDVLP Trigger: TGGGAGAACATCTCTAGGCCTGAGGCTGTCCAGCAGACTTTCCAAGGCCTGGGGCCTGGCTTCTCTGGCTACACAACGTATGGGTGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159450.2 ENSMUST00000161085.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGCCGGAGCAGGTGTAGAGACCACAGGTATCTCTTGTGCACTTGGTGTCGGGTTAGAGTTGTCCGGCTaGTCTGTGGATTCAGCACCC | + |
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Preference number: 2 (lower is better) Translates to: GAGAGVETTGISCALGVGLELSG*SVDSAP Trigger: GGGTGCTGAATCCACAGAGCAGCCGGACAACTCTAA...CCCGACACCAAGTGCACAAGAGATACCTGTGGTCTCTACACCTGCTCCGGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159450.2 |
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| 3UTR-3UTR GCA 90 bp | GCCGGCTGGTTTTCTGCCGGAAACTGGTTGTGTATAGGAGCCGGAGCAGGTGTATGGAACCAGGAGAGCTaGAGCCACCCATACGTTGTG | + |
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Preference number: 2 (lower is better) Translates to: AGWFSAGNWLCIGAGAGVWNQES*SHPYVV Trigger: CACAACGTATGGGTGGCTGCAGCTCTCCTGGTTCCA...TACACCTGCTCCGGCTCCTATACACAACCAGTTTCCGGCAGAAAACCAGCCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159450.2 ENSMUST00000161085.8 |
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| 3UTR-3UTR TCA 90 bp | GCCGGAGCAGGTGTAGAGACCACAGGTATCTCTTGTGCACTTGGTGTCGGGACATCTTGGAGACACTGGTaGTCCAACAGCAGCTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: AGAGVETTGISCALGVGTSWRHW*SNSSFP Trigger: TGGGAAGCTGCTGTTGGATCACCAGTGTCTCCAAGA...TGTCCCGACACCAAGTGCACAAGAGATACCTGTGGTCTCTACACCTGCTCCGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159450.2 |
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| 3UTR CAA 90 bp | TGCATTCATCCGCAAGTTCTGATTGGCTCCGGGATTGACAACCGCTaGAGCAGCTGCATTCTGATTGGCCGGCTGGTTTTCTGCCGGAAA | + |
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Preference number: 2 (lower is better) Translates to: CIHPQVLIGSGIDNR*SSCILIGRLVFCRK Trigger: TTTCCGGCAGAAAACCAGCCGGCCAATCAGAATGCAGCTGCTCAAGCGGTTGTCAATCCCGGAGCCAATCAGAACTTGCGGATGAATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161085.8 |
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| 3UTR CAA 90 bp | CCAGTCTCGGTTTATCTCATCATCTTCCTCCACCAGGGGGCCACCTaGTGCATTCATCCGCAAGTTCTGATTGGCTCCGGGATTGACAAC | + |
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Preference number: 2 (lower is better) Translates to: PVSVYLIIFLHQGAT*CIHPQVLIGSGIDN Trigger: GTTGTCAATCCCGGAGCCAATCAGAACTTGCGGATGAATGCACAAGGTGGCCCCCTGGTGGAGGAAGATGATGAGATAAACCGAGACTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161085.8 |
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| 3UTR CAA 90 bp | TTCCTGATGCAGCAGTGGCAGCTAAGTATTGCATGTAGTACTGCCTaGCATAGATCTGCTGGAACCAGGAGAGCTGCAGCCACCCATACG | + |
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Preference number: 2 (lower is better) Translates to: FLMQQWQLSIACSTA*HRSAGTRRAAATHT Trigger: CGTATGGGTGGCTGCAGCTCTCCTGGTTCCAGCAGATCTATGCAAGGCAGTACTACATGCAATACTTAGCTGCCACTGCTGCATCAGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159450.2 ENSMUST00000161085.8 |
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| 3UTR-3UTR GCA 90 bp | CACACATCTGGGGAGGTGCTCAGGCAGAACATGCGACCCTGGGCCTTCTGCTTACTTAGTTTGTGCTTTTaGTTGGCACAGAAGCACATG | + |
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Preference number: 2 (lower is better) Translates to: HTSGEVLRQNMRPWAFCLLSLCF*LAQKHM Trigger: CATGTGCTTCTGTGCCAAGCAAAAGCACAAACTAAG...TAAGCAGAAGGCCCAGGGTCGCATGTTCTGCCTGAGCACCTCCCCAGATGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
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| 3UTR-3UTR CCA 90 bp | CACACATCTGGGGAGGTGCTCAGGCAGAACATGCGACCCTGGGCCTTCTGCTTAGTTTGTGCTTTTGCTTaGCACAGAAGCACATGTCAT | + |
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Preference number: 2 (lower is better) Translates to: HTSGEVLRQNMRPWAFCLVCAFA*HRSTCH Trigger: ATGACATGTGCTTCTGTGCCAAGCAAAAGCACAAAC...TAAGCAGAAGGCCCAGGGTCGCATGTTCTGCCTGAGCACCTCCCCAGATGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
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| 3UTR-3UTR TCA 90 bp | ACACATGCACACACATCTGGGGAGGTGCTCAGGCAGAACATGCGACCCTGGGCCTGCTTACAGTGCCTATaGAACTACATACAGTATACA | + |
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Preference number: 2 (lower is better) Translates to: THAHTSGEVLRQNMRPWACLQCL*NYIQYT Trigger: TGTATACTGTATGTAGTTTCATAGGCACTGTAAGCA...GGCCCAGGGTCGCATGTTCTGCCTGAGCACCTCCCCAGATGTGTGTGCATGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAAAACTCGGCAAAGGTTTTACCTCTGCCAAGTCGCCACCCTCGGTTTAAAGCATGTACAGCACACATaGACACACATCTGGGGAGGT | + |
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Preference number: 2 (lower is better) Translates to: QKTRQRFYLCQVATLGLKHVQHT*THIWGG Trigger: ACCTCCCCAGATGTGTGTGCATGTGTGCTGTACATG...CTTTAAACCGAGGGTGGCGACTTGGCAGAGGTAAAACCTTTGCCGAGTTTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
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| 3UTR-3UTR GCA 90 bp | AAAACGTCGCTGCGGAATAGGTCCAATCCAACCAGTCTCGGTTTATCTCATCATAACCGCTTGAGCAGCTaGATTCTGATTGGCCGGCTG | + |
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Preference number: 2 (lower is better) Translates to: KTSLRNRSNPTSLGLSHHNRLSS*ILIGRL Trigger: CAGCCGGCCAATCAGAATGCAGCTGCTCAAGCGGTT...ATGATGAGATAAACCGAGACTGGTTGGATTGGACCTATTCCGCAGCGACGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161085.8 |
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| 3UTR-3UTR TCA 90 bp | CAAAGGTTTTACCTCTGCCAAGTCGCCACCCTCGGTTTAAAGGAAAGCACTGCACCGTTTCTGCATCTATaGCTTCCATGTAGAGCACAC | + |
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Preference number: 2 (lower is better) Translates to: QRFYLCQVATLGLKESTAPFLHL*LPCRAH Trigger: GTGTGCTCTACATGGAAGTCATAGATGCAGAAACGG...TGCAGTGCTTTCCTTTAAACCGAGGGTGGCGACTTGGCAGAGGTAAAACCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 ENSMUST00000211982.2 |
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| 3UTR-3UTR CCA 90 bp | GGACAAAAGTTCCTGATGCAGCAGTGGCAGCTAAGTATTGCATGTAGTACTGCCCAGCACCCTTTGTGCTaGTTTCTGGCATTTTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: GQKFLMQQWQLSIACSTAQHPLC*FLAFWR Trigger: CCTCCAAAATGCCAGAAACCAGCACAAAGGGTGCTG...GGCAGTACTACATGCAATACTTAGCTGCCACTGCTGCATCAGGAACTTTTGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159450.2 |
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| 3UTR-3UTR GCA 90 bp | ATTGCATGTAGTACTGCCTTGCATAGATCTGCTGGAACCAGGAGAGCTGCAGCCCGAAGAACTTCTCTTTaGCGTAAACCATCACTTGAG | + |
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Preference number: 2 (lower is better) Translates to: IACSTALHRSAGTRRAAARRTSL*RKPSLE Trigger: CTCAAGTGATGGTTTACGGCAAAGAGAAGTTCTTCG...GGCTGCAGCTCTCCTGGTTCCAGCAGATCTATGCAAGGCAGTACTACATGCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159450.2 ENSMUST00000161085.8 |
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| 3UTR-3UTR GCA 90 bp | TTGTGTATAGGAGCCGGAGCAGGTGTAGAGACCACAGGTATCTCTTGTGCACTTCATGTAGTACTGCCTTaGATAGATCTGCTGGAACCA | + |
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Preference number: 2 (lower is better) Translates to: LCIGAGAGVETTGISCALHVVLP*IDLLEP Trigger: TGGTTCCAGCAGATCTATGCAAGGCAGTACTACATG...AAGTGCACAAGAGATACCTGTGGTCTCTACACCTGCTCCGGCTCCTATACACAA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159450.2 ENSMUST00000161085.8 |
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| 3UTR-3UTR CCA 90 bp | CAAAGGTTTTACCTCTGCCAAGTCGCCACCCTCGGTTTAAAGGAAAGCACTGCAGCACATGTCATCCTGTaGGTTTTCAATGACTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: QRFYLCQVATLGLKESTAAHVIL*VFNDSV Trigger: GACAGAGTCATTGAAAACCCACAGGATGACATGTGC...TGCAGTGCTTTCCTTTAAACCGAGGGTGGCGACTTGGCAGAGGTAAAACCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAAAACTCGGCAAAGGTTTTACCTCTGCCAAGTCGCCACCCTCGGTTTAAAGCTTAGTTTGTGCTTTTaGTTGGCACAGAAGCACATG | + |
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Preference number: 2 (lower is better) Translates to: QKTRQRFYLCQVATLGLKLSLCF*LAQKHM Trigger: CATGTGCTTCTGTGCCAAGCAAAAGCACAAACTAAG...CTTTAAACCGAGGGTGGCGACTTGGCAGAGGTAAAACCTTTGCCGAGTTTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAAAACTCGGCAAAGGTTTTACCTCTGCCAAGTCGCCACCCTCGGTTTAAAGCAGCAGAACCGTTTCTaGATCTATGACTTCCATGTA | + |
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Preference number: 2 (lower is better) Translates to: QKTRQRFYLCQVATLGLKQQNRF*IYDFHV Trigger: TACATGGAAGTCATAGATGCAGAAACGGTTCTGCTG...CTTTAAACCGAGGGTGGCGACTTGGCAGAGGTAAAACCTTTGCCGAGTTTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 ENSMUST00000211982.2 |
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| 3UTR-3UTR GCA 90 bp | CGGAGGGAGAAAGGTTCCGAAGAACTTCTCTTTGCCGTAAACCATCACTTGAGGAGGGATTCTTCACATTaGACACAAGGTGCAAAACAT | + |
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Preference number: 2 (lower is better) Translates to: RREKGSEELLFAVNHHLRRDSSH*TQGAKH Trigger: ATGTTTTGCACCTTGTGTGCAATGTGAAGAATCCCT...CCTCAAGTGATGGTTTACGGCAAAGAGAAGTTCTTCGGAACCTTTCTCCCTCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159450.2 |
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| 3UTR-3UTR GCA 90 bp | CAGTGGCAGCTAAGTATTGCATGTAGTACTGCCTTGCATAGATCTGCTGGAACCCGAAGAACTTCTCTTTaGCGTAAACCATCACTTGAG | + |
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Preference number: 2 (lower is better) Translates to: QWQLSIACSTALHRSAGTRRTSL*RKPSLE Trigger: CTCAAGTGATGGTTTACGGCAAAGAGAAGTTCTTCG...GGTTCCAGCAGATCTATGCAAGGCAGTACTACATGCAATACTTAGCTGCCACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159450.2 ENSMUST00000161085.8 |
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| 3UTR-3UTR CCA 90 bp | GTATACATTAAAGCTCTTCAGAATAACGACATGAGGGGCCCTGTTCAGTTTGTAGCACATGTCATCCTGTaGGTTTTCAATGACTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: VYIKALQNNDMRGPVQFVAHVIL*VFNDSV Trigger: GACAGAGTCATTGAAAACCCACAGGATGACATGTGC...TACAAACTGAACAGGGCCCCTCATGTCGTTATTCTGAAGAGCTTTAATGTATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
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| 3UTR-3UTR CCA 90 bp | GTATACATTAAAGCTCTTCAGAATAACGACATGAGGGGCCCTGTTCAGTTTGTAGTTTGTGCTTTTGCTTaGCACAGAAGCACATGTCAT | + |
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Preference number: 2 (lower is better) Translates to: VYIKALQNNDMRGPVQFVVCAFA*HRSTCH Trigger: ATGACATGTGCTTCTGTGCCAAGCAAAAGCACAAAC...TACAAACTGAACAGGGCCCCTCATGTCGTTATTCTGAAGAGCTTTAATGTATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
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| 3UTR GCA 72 bp | ATGCACACACATCTGGGGAGGTGCTCAGGCAGAACATaGGACCCTGGGCCTTCTGCTTACAGTGCCTATGAA | + |
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Preference number: 3 (lower is better) Translates to: MHTHLGRCSGRT*DPGPSAYSAYE Trigger: TTCATAGGCACTGTAAGCAGAAGGCCCAGGGTCGCATGTTCTGCCTGAGCACCTCCCCAGATGTGTGTGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
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| 3UTR-3UTR CAA 90 bp | CACATGCACACACATCTGGGGAGGTGCTCAGGCAGAACATGCGACCCTGGGCCTAGTTTGTGCTTTTGCTaGGCACAGAAGCACATGTCA | + |
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Preference number: 3 (lower is better) Translates to: HMHTHLGRCSGRTCDPGPSLCFC*AQKHMS Trigger: TGACATGTGCTTCTGTGCCAAGCAAAAGCACAAACT...AGGCCCAGGGTCGCATGTTCTGCCTGAGCACCTCCCCAGATGTGTGTGCATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
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| 3UTR-3UTR CAA 90 bp | GCCGGCTGGTTTTCTGCCGGAAACTGGTTGTGTATAGGAGCCGGAGCAGGTGTAGGGATTGACAACCGCTaGAGCAGCTGCATTCTGATT | + |
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Preference number: 3 (lower is better) Translates to: AGWFSAGNWLCIGAGAGVGIDNR*SSCILI Trigger: AATCAGAATGCAGCTGCTCAAGCGGTTGTCAATCCC...TACACCTGCTCCGGCTCCTATACACAACCAGTTTCCGGCAGAAAACCAGCCGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161085.8 |
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| 3UTR TCA 72 bp | GTGCATTCATCCGCAAGTTCTGATTGGCTCCGGGATTaGCAACCGCTTGAGCAGCTGCATTCTGATTGGCCG | + |
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Preference number: 3 (lower is better) Translates to: VHSSASSDWLRD*QPLEQLHSDWP Trigger: CGGCCAATCAGAATGCAGCTGCTCAAGCGGTTGTCAATCCCGGAGCCAATCAGAACTTGCGGATGAATGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161085.8 |
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| 3UTR GCA 72 bp | TATCTCATCATCTTCCTCCACCAGGGGGCCACCTTGTaGATTCATCCGCAAGTTCTGATTGGCTCCGGGATT | + |
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Preference number: 3 (lower is better) Translates to: YLIIFLHQGATL*IHPQVLIGSGI Trigger: AATCCCGGAGCCAATCAGAACTTGCGGATGAATGCACAAGGTGGCCCCCTGGTGGAGGAAGATGATGAGATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161085.8 |
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| 3UTR-3UTR CAA 90 bp | AACAGAAAACGTCGCTGCGGAATAGGTCCAATCCAACCAGTCTCGGTTTATCTCCACCAGGGGGCCACCTaGTGCATTCATCCGCAAGTT | + |
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Preference number: 3 (lower is better) Translates to: NRKRRCGIGPIQPVSVYLHQGAT*CIHPQV Trigger: AACTTGCGGATGAATGCACAAGGTGGCCCCCTGGTG...GAGATAAACCGAGACTGGTTGGATTGGACCTATTCCGCAGCGACGTTTTCTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161085.8 |
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| 3UTR-3UTR CAA 90 bp | AGGTGCTCAGGCAGAACATGCGACCCTGGGCCTTCTGCTTACAGTGCCTATGAAAGTTTGTGCTTTTGCTaGGCACAGAAGCACATGTCA | + |
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Preference number: 3 (lower is better) Translates to: RCSGRTCDPGPSAYSAYESLCFC*AQKHMS Trigger: TGACATGTGCTTCTGTGCCAAGCAAAAGCACAAACT...TTCATAGGCACTGTAAGCAGAAGGCCCAGGGTCGCATGTTCTGCCTGAGCACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
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| 3UTR TCA 72 bp | AAACCATCACTTGAGGAGTCCCCAGGATGCTGTGTCTaGTTAGAGTTGTCCGGCTGCTCTGTGGATTCAGCA | + |
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Preference number: 3 (lower is better) Translates to: KPSLEESPGCCV*LELSGCSVDSA Trigger: TGCTGAATCCACAGAGCAGCCGGACAACTCTAATCAGACACAGCATCCTGGGGACTCCTCAAGTGATGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159450.2 |
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| 3UTR CCA 72 bp | TGTCCGGCTGCTCTGTGGATTCAGCACCCTTTGTGCTaGTTTCTGGCATTTTGGAGGGATTCTTCACATTGC | + |
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Preference number: 3 (lower is better) Translates to: CPAALWIQHPLC*FLAFWRDSSHC Trigger: GCAATGTGAAGAATCCCTCCAAAATGCCAGAAACCAGCACAAAGGGTGCTGAATCCACAGAGCAGCCGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159450.2 |
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| 3UTR GCA 72 bp | AGTTGTCCGGCTGCTCTGTGGATTCAGCACCCTTTGTaGTGGTTTCTGGCATTTTGGAGGGATTCTTCACAT | + |
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Preference number: 3 (lower is better) Translates to: SCPAALWIQHPL*WFLAFWRDSSH Trigger: ATGTGAAGAATCCCTCCAAAATGCCAGAAACCAGCACAAAGGGTGCTGAATCCACAGAGCAGCCGGACAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159450.2 |
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| 3UTR-3UTR CAA 90 bp | TCTCTTGTGCACTTGGTGTCGGGACAAAAGTTCCTGATGCAGCAGTGGCAGCTACTTTGGAAGCAAATCTaGGAGACACTGGTGATCCAA | + |
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Preference number: 3 (lower is better) Translates to: SLVHLVSGQKFLMQQWQLLWKQI*ETLVIQ Trigger: TTGGATCACCAGTGTCTCCAAGATTTGCTTCCAAAG...TAGCTGCCACTGCTGCATCAGGAACTTTTGTCCCGACACCAAGTGCACAAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159450.2 |
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| 3UTR-3UTR CAA 90 bp | CTGCTCTGTGGATTCAGCACCCTTTGTGCTGGTTTCTGGCATTTTGGAGGGATTGTCGCTTTTCCTGCTTaGGAAGCAAATCTTGGAGAC | + |
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Preference number: 3 (lower is better) Translates to: LLCGFSTLCAGFWHFGGIVAFPA*EANLGD Trigger: GTCTCCAAGATTTGCTTCCAAAGCAGGAAAAGCGAC...AATCCCTCCAAAATGCCAGAAACCAGCACAAAGGGTGCTGAATCCACAGAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159450.2 |
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| 3UTR-3UTR CAA 90 bp | GGAGCAGGTGTAGAGACCACAGGTATCTCTTGTGCACTTGGTGTCGGGACAAAAGAGGGATTCTTCACATaGCACACAAGGTGCAAAACA | + |
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Preference number: 3 (lower is better) Translates to: GAGVETTGISCALGVGTKEGFFT*HTRCKT Trigger: TGTTTTGCACCTTGTGTGCAATGTGAAGAATCCCTC...TTTTGTCCCGACACCAAGTGCACAAGAGATACCTGTGGTCTCTACACCTGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159450.2 |
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| 3UTR CCA 72 bp | CACTTGGTGTCGGGACAAAAGTTCCTGATGCAGCAGTaGCAGCTAAGTATTGCATGTAGTACTGCCTTGCAT | + |
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Preference number: 3 (lower is better) Translates to: HLVSGQKFLMQQ*QLSIACSTALH Trigger: ATGCAAGGCAGTACTACATGCAATACTTAGCTGCCACTGCTGCATCAGGAACTTTTGTCCCGACACCAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159450.2 ENSMUST00000161085.8 |
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| 3UTR-3UTR CAA 90 bp | AACAGAAAACGTCGCTGCGGAATAGGTCCAATCCAACCAGTCTCGGTTTATCTCGTATCTCTTGTGCACTaGGTGTCGGGACAAAAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: NRKRRCGIGPIQPVSVYLVSLVH*VSGQKF Trigger: GAACTTTTGTCCCGACACCAAGTGCACAAGAGATAC...GAGATAAACCGAGACTGGTTGGATTGGACCTATTCCGCAGCGACGTTTTCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161085.8 |
||
| 3UTR GCA 72 bp | CCAACAGGAATCAAATCGAACCAGCAGAACCGTTTCTaGATCTATGACTTCCATGTAGAGCACACATGCACA | + |
|
Preference number: 3 (lower is better) Translates to: PTGIKSNQQNRF*IYDFHVEHTCT Trigger: TGTGCATGTGTGCTCTACATGGAAGTCATAGATGCAGAAACGGTTCTGCTGGTTCGATTTGATTCCTGTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 ENSMUST00000211982.2 |
||
| 3UTR GCA 72 bp | GAAGTAAAGGATGCTGAGGAAAACAGAAAACGTCGCTaGGGAATAGGTCCAATCCAACCAGTCTCGGTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: EVKDAEENRKRR*GIGPIQPVSVY Trigger: ATAAACCGAGACTGGTTGGATTGGACCTATTCCGCAGCGACGTTTTCTGTTTTCCTCAGCATCCTTTACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161085.8 |
||
| 3UTR GCA 72 bp | TTTATTGAACAGAAAACTCGGCAAAGGTTTTACCTCTaGCAAGTCGCCACCCTCGGTTTAAAGGAAAGCACT | + |
|
Preference number: 3 (lower is better) Translates to: FIEQKTRQRFYL*QVATLGLKEST Trigger: AGTGCTTTCCTTTAAACCGAGGGTGGCGACTTGGCAGAGGTAAAACCTTTGCCGAGTTTTCTGTTCAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 ENSMUST00000211982.2 |
||
| 3UTR TCA 72 bp | ATACAGTATACATTAAAGCTCTTCAGAATAACGACATaGGGGGCCCTGTTCAGTTTGTACCACGGCTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: IQYTLKLFRITT*GALFSLYHGFM Trigger: CATGAAGCCGTGGTACAAACTGAACAGGGCCCCTCATGTCGTTATTCTGAAGAGCTTTAATGTATACTGTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| 3UTR TCA 72 bp | AACATGCGACCCTGGGCCTTCTGCTTACAGTGCCTATaGAACTACATACAGTATACATTAAAGCTCTTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: NMRPWAFCLQCL*NYIQYTLKLFR Trigger: TCTGAAGAGCTTTAATGTATACTGTATGTAGTTTCATAGGCACTGTAAGCAGAAGGCCCAGGGTCGCATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| 3UTR CAA 72 bp | TCTGCTGGAACCAGGAGAGCTGCAGCCACCCATACGTaGTGTAGCCAGAGAAGCCAGGCCCCAGGCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SAGTRRAAATHT*CSQRSQAPGLG Trigger: TCCAAGGCCTGGGGCCTGGCTTCTCTGGCTACACAACGTATGGGTGGCTGCAGCTCTCCTGGTTCCAGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159450.2 ENSMUST00000161085.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGTCGAGTCCACGCCAGGGGAGGAAAAGGAGCCGGAGCCAGACGATCCAGTCAGCTGCATTCTGATTaGCCGGCTGGTTTTCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LCRVHARGGKGAGARRSSQLHSD*PAGFLP Trigger: CGGCAGAAAACCAGCCGGCCAATCAGAATGCAGCTG...ACTGGATCGTCTGGCTCCGGCTCCTTTTCCTCCCCTGGCGTGGACTCGACAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR GCA 90 bp | CACATGCACACACATCTGGGGAGGTGCTCAGGCAGAACATGCGACCCTGGGCCTAACCGCTTGAGCAGCTaGATTCTGATTGGCCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HMHTHLGRCSGRTCDPGPNRLSS*ILIGRL Trigger: CAGCCGGCCAATCAGAATGCAGCTGCTCAAGCGGTT...AGGCCCAGGGTCGCATGTTCTGCCTGAGCACCTCCCCAGATGTGTGTGCATGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CCA 90 bp | AGGTGCTCAGGCAGAACATGCGACCCTGGGCCTTCTGCTTACAGTGCCTATGAACGCGGTGGCGCTGATTaGGACTCTTCACCAGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RCSGRTCDPGPSAYSAYERGGAD*DSSPAA Trigger: CGCTGCTGGTGAAGAGTCCCAATCAGCGCCACCGCG...TTCATAGGCACTGTAAGCAGAAGGCCCAGGGTCGCATGTTCTGCCTGAGCACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR TCA 90 bp | AGGTGCTCAGGCAGAACATGCGACCCTGGGCCTTCTGCTTACAGTGCCTATGAAAAGTCGCGGTGGCGCTaGTTGGGACTCTTCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RCSGRTCDPGPSAYSAYEKSRWR*LGLFTS Trigger: GCTGGTGAAGAGTCCCAATCAGCGCCACCGCGACTT...TTCATAGGCACTGTAAGCAGAAGGCCCAGGGTCGCATGTTCTGCCTGAGCACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR TCA 90 bp | CACATGCACACACATCTGGGGAGGTGCTCAGGCAGAACATGCGACCCTGGGCCTTCTTGGAGACACTGGTaGTCCAACAGCAGCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HMHTHLGRCSGRTCDPGPSWRHW*SNSSFP Trigger: TGGGAAGCTGCTGTTGGATCACCAGTGTCTCCAAGA...AGGCCCAGGGTCGCATGTTCTGCCTGAGCACCTCCCCAGATGTGTGTGCATGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR TCA 90 bp | CTCTGTCGAGTCCACGCCAGGGGAGGAAAAGGAGCCGGAGCCAGACGATCCAGTTTCATCCGCAAGTTCTaGTTGGCTCCGGGATTGACA | + |
|
Preference number: 4 (lower is better) Translates to: LCRVHARGGKGAGARRSSFIRKF*LAPGLT Trigger: TGTCAATCCCGGAGCCAATCAGAACTTGCGGATGAA...ACTGGATCGTCTGGCTCCGGCTCCTTTTCCTCCCCTGGCGTGGACTCGACAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGAGCCGGAGCCAGACGATCCAGTCCGAGCTGTCAAAGCCACCAGCGACAGCGGGAAGTTCTGAACTaGCCTCTGTCTGAACGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KGAGARRSSPSCQSHQRQREVLN*PLSERK Trigger: TTTCCGTTCAGACAGAGGCCAGTTCAGAACTTCCCG...CTGTCGCTGGTGGCTTTGACAGCTCGGACTGGATCGTCTGGCTCCGGCTCCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CCA 90 bp | CACATGCACACACATCTGGGGAGGTGCTCAGGCAGAACATGCGACCCTGGGCCTCGGGAAGTTCTGAACTaGCCTCTGTCTGAACGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HMHTHLGRCSGRTCDPGPREVLN*PLSERK Trigger: TTTCCGTTCAGACAGAGGCCAGTTCAGAACTTCCCG...AGGCCCAGGGTCGCATGTTCTGCCTGAGCACCTCCCCAGATGTGTGTGCATGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CCA 90 bp | AGGTGCTCAGGCAGAACATGCGACCCTGGGCCTTCTGCTTACAGTGCCTATGAATGTTGGGGTCCTGGTTaGCAGCATCTCGAGGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: RCSGRTCDPGPSAYSAYECWGPG*QHLEDH Trigger: GTGGTCCTCGAGATGCTGCCAACCAGGACCCCAACA...TTCATAGGCACTGTAAGCAGAAGGCCCAGGGTCGCATGTTCTGCCTGAGCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR TCA 90 bp | ATTGAACAGAAAACTCGGCAAAGGTTTTACCTCTGCCAAGTCGCCACCCTCGGTGGCTCAGGTGGGCCTTaGGGCGACTCACACTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: IEQKTRQRFYLCQVATLGGSGGP*GDSHSN Trigger: GTTGGAGTGTGAGTCGCCTCAAGGCCCACCTGAGCC...ACCGAGGGTGGCGACTTGGCAGAGGTAAAACCTTTGCCGAGTTTTCTGTTCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR TCA 90 bp | CACATGCACACACATCTGGGGAGGTGCTCAGGCAGAACATGCGACCCTGGGCCTAGGCAAAGAAAGTCTTaGAGACTAGCCATGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HMHTHLGRCSGRTCDPGPRQRKS*RLAMLC Trigger: GCACAGCATGGCTAGTCTTCAAGACTTTCTTTGCCT...AGGCCCAGGGTCGCATGTTCTGCCTGAGCACCTCCCCAGATGTGTGTGCATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR GCA 90 bp | AAGCACATGTCATCCTGTGGGTTTTCAATGACTCTGTCGAGTCCACGCCAGGGGGACTCACACTCCAACTaGGGTCGCCACTCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KHMSSCGFSMTLSSPRQGDSHSN*GRHSAP Trigger: TGGAGCTGAGTGGCGACCGCAGTTGGAGTGTGAGTC...CCCCTGGCGTGGACTCGACAGAGTCATTGAAAACCCACAGGATGACATGTGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| 3UTR CAA 72 bp | CCGCAAGTTCTGATTGGCTCCGGGATTGACAACCGCTaGAGCAGCTGCATTCTGATTGGCCGGCTGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PQVLIGSGIDNR*SSCILIGRLVF Trigger: GAAAACCAGCCGGCCAATCAGAATGCAGCTGCTCAAGCGGTTGTCAATCCCGGAGCCAATCAGAACTTGCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161085.8 |
||
| CDS-3UTR TCA 90 bp | GGCCCTGTTCAGTTTGTACCACGGCTTCATGTCTTAGTTTGTGCTTTTGCTTGGGGCTCAGGTGGGCCTTaGGGCGACTCACACTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: GPVQFVPRLHVLVCAFAWGSGGP*GDSHSN Trigger: GTTGGAGTGTGAGTCGCCTCAAGGCCCACCTGAGCC...CCAAGCAAAAGCACAAACTAAGACATGAAGCCGTGGTACAAACTGAACAGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR TCA 90 bp | CTCTGTCGAGTCCACGCCAGGGGAGGAAAAGGAGCCGGAGCCAGACGATCCAGTAGAAGTAAAGGATGCTaGGGAAAACAGAAAACGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LCRVHARGGKGAGARRSSRSKGC*GKQKTS Trigger: CGACGTTTTCTGTTTTCCTCAGCATCCTTTACTTCT...ACTGGATCGTCTGGCTCCGGCTCCTTTTCCTCCCCTGGCGTGGACTCGACAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGGTTTTACCTCTGCCAAGTCGCCACCCTCGGTTTAAAGGAAAGCACTGCAAACGAGGGGCTGGTGTaGTCAGGGTCCAGCACTTCG | + |
|
Preference number: 4 (lower is better) Translates to: QRFYLCQVATLGLKESTANEGLV*SGSSTS Trigger: CGAAGTGCTGGACCCTGAGCACACCAGCCCCTCGTT...TGCAGTGCTTTCCTTTAAACCGAGGGTGGCGACTTGGCAGAGGTAAAACCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| 3UTR CAA 72 bp | GTTTATCTCATCATCTTCCTCCACCAGGGGGCCACCTaGTGCATTCATCCGCAAGTTCTGATTGGCTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: VYLIIFLHQGAT*CIHPQVLIGSG Trigger: CCCGGAGCCAATCAGAACTTGCGGATGAATGCACAAGGTGGCCCCCTGGTGGAGGAAGATGATGAGATAAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161085.8 |
||
| CDS-3UTR TCA 90 bp | GGCCCTGTTCAGTTTGTACCACGGCTTCATGTCTTAGTTTGTGCTTTTGCTTGGAAGTCGCGGTGGCGCTaGTTGGGACTCTTCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GPVQFVPRLHVLVCAFAWKSRWR*LGLFTS Trigger: GCTGGTGAAGAGTCCCAATCAGCGCCACCGCGACTT...CCAAGCAAAAGCACAAACTAAGACATGAAGCCGTGGTACAAACTGAACAGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR TCA 90 bp | AGGTGCTCAGGCAGAACATGCGACCCTGGGCCTTCTGCTTACAGTGCCTATGAATTCATCCGCAAGTTCTaGTTGGCTCCGGGATTGACA | + |
|
Preference number: 4 (lower is better) Translates to: RCSGRTCDPGPSAYSAYEFIRKF*LAPGLT Trigger: TGTCAATCCCGGAGCCAATCAGAACTTGCGGATGAA...TTCATAGGCACTGTAAGCAGAAGGCCCAGGGTCGCATGTTCTGCCTGAGCACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR GCA 90 bp | AAAGGAGCCGGAGCCAGACGATCCAGTCCGAGCTGTCAAAGCCACCAGCGACAGCGAAGAACTTCTCTTTaGCGTAAACCATCACTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KGAGARRSSPSCQSHQRQRRTSL*RKPSLE Trigger: CTCAAGTGATGGTTTACGGCAAAGAGAAGTTCTTCG...CTGTCGCTGGTGGCTTTGACAGCTCGGACTGGATCGTCTGGCTCCGGCTCCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CCA 90 bp | GCCTTGCATAGATCTGCTGGAACCAGGAGAGCTGCAGCCACCCATACGTTGTGTCAGCACCCTTTGTGCTaGTTTCTGGCATTTTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALHRSAGTRRAAATHTLCQHPLC*FLAFWR Trigger: CCTCCAAAATGCCAGAAACCAGCACAAAGGGTGCTG...ACACAACGTATGGGTGGCTGCAGCTCTCCTGGTTCCAGCAGATCTATGCAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161085.8 |
||
| 3UTR CAA 72 bp | CAGCAGTGGCAGCTAAGTATTGCATGTAGTACTGCCTaGCATAGATCTGCTGGAACCAGGAGAGCTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QQWQLSIACSTA*HRSAGTRRAAA Trigger: GGCTGCAGCTCTCCTGGTTCCAGCAGATCTATGCAAGGCAGTACTACATGCAATACTTAGCTGCCACTGCTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159450.2 ENSMUST00000161085.8 |
||
| CDS-3UTR GCA 90 bp | AAAGGAGCCGGAGCCAGACGATCCAGTCCGAGCTGTCAAAGCCACCAGCGACAGAGGGATTCTTCACATTaGACACAAGGTGCAAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: KGAGARRSSPSCQSHQRQRDSSH*TQGAKH Trigger: ATGTTTTGCACCTTGTGTGCAATGTGAAGAATCCCT...CTGTCGCTGGTGGCTTTGACAGCTCGGACTGGATCGTCTGGCTCCGGCTCCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR GCA 90 bp | ATTGAACAGAAAACTCGGCAAAGGTTTTACCTCTGCCAAGTCGCCACCCTCGGTTGGAACCAGGAGAGCTaGAGCCACCCATACGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: IEQKTRQRFYLCQVATLGWNQES*SHPYVV Trigger: CACAACGTATGGGTGGCTGCAGCTCTCCTGGTTCCA...ACCGAGGGTGGCGACTTGGCAGAGGTAAAACCTTTGCCGAGTTTTCTGTTCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 ENSMUST00000211982.2 |
||
| CDS-3UTR GCA 90 bp | ATTGAACAGAAAACTCGGCAAAGGTTTTACCTCTGCCAAGTCGCCACCCTCGGTAACCGCTTGAGCAGCTaGATTCTGATTGGCCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IEQKTRQRFYLCQVATLGNRLSS*ILIGRL Trigger: CAGCCGGCCAATCAGAATGCAGCTGCTCAAGCGGTT...ACCGAGGGTGGCGACTTGGCAGAGGTAAAACCTTTGCCGAGTTTTCTGTTCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 ENSMUST00000211982.2 |
||
| CDS-3UTR GCA 90 bp | CAGAAAACTCGGCAAAGGTTTTACCTCTGCCAAGTCGCCACCCTCGGTTTAAAGAACCGCTTGAGCAGCTaGATTCTGATTGGCCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QKTRQRFYLCQVATLGLKNRLSS*ILIGRL Trigger: CAGCCGGCCAATCAGAATGCAGCTGCTCAAGCGGTT...CTTTAAACCGAGGGTGGCGACTTGGCAGAGGTAAAACCTTTGCCGAGTTTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 ENSMUST00000211982.2 |
||
| CDS-3UTR GCA 90 bp | CAGAAAACTCGGCAAAGGTTTTACCTCTGCCAAGTCGCCACCCTCGGTTTAAAGCAGGGGGCCACCTTGTaGATTCATCCGCAAGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QKTRQRFYLCQVATLGLKQGATL*IHPQVL Trigger: CAGAACTTGCGGATGAATGCACAAGGTGGCCCCCTG...CTTTAAACCGAGGGTGGCGACTTGGCAGAGGTAAAACCTTTGCCGAGTTTTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 ENSMUST00000211982.2 |
||
| CDS-3UTR GCA 90 bp | AAACTGGTTGTGTATAGGAGCCGGAGCAGGTGTAGAGACCACAGGTATCTCTTGTTCAAAGTCCCCATCTaGAGCCACCCGATTGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KLVVYRSRSRCRDHRYLLFKVPI*SHPIAL Trigger: GAGGGCAATCGGGTGGCTGCAGATGGGGACTTTGAA...CAAGAGATACCTGTGGTCTCTACACCTGCTCCGGCTCCTATACACAACCAGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159450.2 |
||
| CDS-3UTR CCA 90 bp | TGCATCTATGACTTCCATGTAGAGCACACATGCACACACGTCTATGACTTCCATCGCGGTGGCGCTGATTaGGACTCTTCACCAGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: CIYDFHVEHTCTHVYDFHRGGAD*DSSPAA Trigger: CGCTGCTGGTGAAGAGTCCCAATCAGCGCCACCGCG...ATGGAAGTCATAGACGTGTGTGCATGTGTGCTCTACATGGAAGTCATAGATGCA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGGTTTTACCTCTGCCAAGTCGCCACCCTCGGTTTAAAGGAAAGCACTGCACAGCTGCATTCTGATTaGCCGGCTGGTTTTCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QRFYLCQVATLGLKESTAQLHSD*PAGFLP Trigger: CGGCAGAAAACCAGCCGGCCAATCAGAATGCAGCTG...TGCAGTGCTTTCCTTTAAACCGAGGGTGGCGACTTGGCAGAGGTAAAACCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 ENSMUST00000211982.2 |
||
| CDS-3UTR GCA 90 bp | CTTTTGCTTGGCACAGAAGCACATGTCATCCTGTGGGTTTTCAATGACTCTGTCGACTCACACTCCAACTaGGGTCGCCACTCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLLGTEAHVILWVFNDSVDSHSN*GRHSAP Trigger: TGGAGCTGAGTGGCGACCGCAGTTGGAGTGTGAGTC...GACAGAGTCATTGAAAACCCACAGGATGACATGTGCTTCTGTGCCAAGCAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR GCA 90 bp | AGGTGCTCAGGCAGAACATGCGACCCTGGGCCTTCTGCTTACAGTGCCTATGAACATGTAGTACTGCCTTaGATAGATCTGCTGGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: RCSGRTCDPGPSAYSAYEHVVLP*IDLLEP Trigger: TGGTTCCAGCAGATCTATGCAAGGCAGTACTACATG...TTCATAGGCACTGTAAGCAGAAGGCCCAGGGTCGCATGTTCTGCCTGAGCACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR GCA 90 bp | AGGTGCTCAGGCAGAACATGCGACCCTGGGCCTTCTGCTTACAGTGCCTATGAAAACAGAAAACGTCGCTaGGGAATAGGTCCAATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RCSGRTCDPGPSAYSAYENRKRR*GIGPIQ Trigger: TTGGATTGGACCTATTCCGCAGCGACGTTTTCTGTT...TTCATAGGCACTGTAAGCAGAAGGCCCAGGGTCGCATGTTCTGCCTGAGCACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCTTGGAAAGTCTGCTGGACAGCCTCAGGCCTAGAGATGTTCTCCCATCCGCTTTGTGCTGGTTTCTaGCATTTTGGAGGGATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RPWKVCWTASGLEMFSHPLCAGF*HFGGIL Trigger: AAGAATCCCTCCAAAATGCCAGAAACCAGCACAAAG...CGGATGGGAGAACATCTCTAGGCCTGAGGCTGTCCAGCAGACTTTCCAAGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161085.8 |
||
| CDS-3UTR CCA 90 bp | ATTAAAGCTCTTCAGAATAACGACATGAGGGGCCCTGTTCAGTTTGTACCACGGTGTTGGGGTCCTGGTTaGCAGCATCTCGAGGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: IKALQNNDMRGPVQFVPRCWGPG*QHLEDH Trigger: GTGGTCCTCGAGATGCTGCCAACCAGGACCCCAACA...CCGTGGTACAAACTGAACAGGGCCCCTCATGTCGTTATTCTGAAGAGCTTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CCA 90 bp | CATGCGACCCTGGGCCTTCTGCTTACAGTGCCTATGAAACTACATACAGTATACGGGGTCTTCCATTTCTaGGTCCATACCTCCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HATLGLLLTVPMKLHTVYGVFHF*VHTSLE Trigger: CTCCAGGGAGGTATGGACCCAGAAATGGAAGACCCC...GTATACTGTATGTAGTTTCATAGGCACTGTAAGCAGAAGGCCCAGGGTCGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CCA 90 bp | GGCCCTGTTCAGTTTGTACCACGGCTTCATGTCTTAGTTTGTGCTTTTGCTTGGGGGGTCTTCCATTTCTaGGTCCATACCTCCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GPVQFVPRLHVLVCAFAWGVFHF*VHTSLE Trigger: CTCCAGGGAGGTATGGACCCAGAAATGGAAGACCCC...CCAAGCAAAAGCACAAACTAAGACATGAAGCCGTGGTACAAACTGAACAGGGCC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR TCA 90 bp | CAAAGGTTTTACCTCTGCCAAGTCGCCACCCTCGGTTTAAAGGAAAGCACTGCATTCATCCGCAAGTTCTaGTTGGCTCCGGGATTGACA | + |
|
Preference number: 4 (lower is better) Translates to: QRFYLCQVATLGLKESTAFIRKF*LAPGLT Trigger: TGTCAATCCCGGAGCCAATCAGAACTTGCGGATGAA...TGCAGTGCTTTCCTTTAAACCGAGGGTGGCGACTTGGCAGAGGTAAAACCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 ENSMUST00000211982.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGGTTTTACCTCTGCCAAGTCGCCACCCTCGGTTTAAAGGAAAGCACTGCACATGCACACACATCATaGGAAATCTGCTCAGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QRFYLCQVATLGLKESTAHAHTS*EICSAR Trigger: CCTCGCTGAGCAGATTTCTCATGATGTGTGTGCATG...TGCAGTGCTTTCCTTTAAACCGAGGGTGGCGACTTGGCAGAGGTAAAACCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211982.2 |
||
| CDS-3UTR GCA 90 bp | ACTTTATTGAACAGAAAACTCGGCAAAGGTTTTACCTCTGCCAAGTCGCCACCCTGGAACCAGGAGAGCTaGAGCCACCCATACGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TLLNRKLGKGFTSAKSPPWNQES*SHPYVV Trigger: CACAACGTATGGGTGGCTGCAGCTCTCCTGGTTCCA...GGGTGGCGACTTGGCAGAGGTAAAACCTTTGCCGAGTTTTCTGTTCAATAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 ENSMUST00000211982.2 |
||
| CDS-3UTR CCA 90 bp | AAGCACATGTCATCCTGTGGGTTTTCAATGACTCTGTCGAGTCCACGCCAGGGGTATCTCTTGTGCACTTaGTGTCGGGACAAAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KHMSSCGFSMTLSSPRQGYLLCT*CRDKSS Trigger: GGAACTTTTGTCCCGACACCAAGTGCACAAGAGATA...CCCCTGGCGTGGACTCGACAGAGTCATTGAAAACCCACAGGATGACATGTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CCA 90 bp | TTGGCACAGAAGCACATGTCATCCTGTGGGTTTTCAATGACTCTGTCGAGTCCACCTGGAGGTTATTGTTaGGGTCCTGGTTGGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LAQKHMSSCGFSMTLSSPPGGYC*GPGWQH Trigger: ATGCTGCCAACCAGGACCCCAACAATAACCTCCAGG...TGGACTCGACAGAGTCATTGAAAACCCACAGGATGACATGTGCTTCTGTGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CCA 90 bp | GGCCCTGTTCAGTTTGTACCACGGCTTCATGTCTTAGTTTGTGCTTTTGCTTGGGGCTGGTGGGCCTTCTaGAAGAAGAGAGGCAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GPVQFVPRLHVLVCAFAWGWWAF*KKRGKE Trigger: TTCTTTGCCTCTCTTCTTCCAGAAGGCCCACCAGCC...CCAAGCAAAAGCACAAACTAAGACATGAAGCCGTGGTACAAACTGAACAGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR GCA 90 bp | ACTTTATTGAACAGAAAACTCGGCAAAGGTTTTACCTCTGCCAAGTCGCCACCCTTAGAGTTGTCCGGCTaGTCTGTGGATTCAGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: TLLNRKLGKGFTSAKSPPLELSG*SVDSAP Trigger: GGGTGCTGAATCCACAGAGCAGCCGGACAACTCTAA...GGGTGGCGACTTGGCAGAGGTAAAACCTTTGCCGAGTTTTCTGTTCAATAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGGTTTTACCTCTGCCAAGTCGCCACCCTCGGTTTAAAGGAAAGCACTGCACACAGGTATCTCTTGTaGACTTGGTGTCGGGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: QRFYLCQVATLGLKESTAHRYLL*TWCRDK Trigger: TTTGTCCCGACACCAAGTGCACAAGAGATACCTGTG...TGCAGTGCTTTCCTTTAAACCGAGGGTGGCGACTTGGCAGAGGTAAAACCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 ENSMUST00000211982.2 |
||
| CDS-3UTR GCA 90 bp | TTACCTCTGCCAAGTCGCCACCCTCGGTTTAAAGGAAAGCACTGCATTTTAAAACAGGGGGCCACCTTGTaGATTCATCCGCAAGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPLPSRHPRFKGKHCILKQGATL*IHPQVL Trigger: CAGAACTTGCGGATGAATGCACAAGGTGGCCCCCTG...TTTTAAAATGCAGTGCTTTCCTTTAAACCGAGGGTGGCGACTTGGCAGAGGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 ENSMUST00000211982.2 |
||
| CDS-3UTR CCA 90 bp | AGGTGCTCAGGCAGAACATGCGACCCTGGGCCTTCTGCTTACAGTGCCTATGAAATGTCGCTTTTCCTTTaGAAGCAAATCTTGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: RCSGRTCDPGPSAYSAYEMSLFL*KQILET Trigger: TGTCTCCAAGATTTGCTTCCAAAGGAAAAGCGACAT...TTCATAGGCACTGTAAGCAGAAGGCCCAGGGTCGCATGTTCTGCCTGAGCACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034220.8 |
||
| CDS-3UTR CCA 90 bp | GGCCCTGTTCAGTTTGTACCACGGCTTCATGTCTTAGTTTGTGCTTTTGCTTGGCAGCACCCTTTGTGCTaGTTTCTGGCATTTTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GPVQFVPRLHVLVCAFAWQHPLC*FLAFWR Trigger: CCTCCAAAATGCCAGAAACCAGCACAAAGGGTGCTG...CCAAGCAAAAGCACAAACTAAGACATGAAGCCGTGGTACAAACTGAACAGGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CCA 90 bp | CTTTTGCTTGGCACAGAAGCACATGTCATCCTGTGGGTTTTCAATGACTCTGTCCCTGGAGGTTATTGTTaGGGTCCTGGTTGGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLLGTEAHVILWVFNDSVPGGYC*GPGWQH Trigger: ATGCTGCCAACCAGGACCCCAACAATAACCTCCAGG...GACAGAGTCATTGAAAACCCACAGGATGACATGTGCTTCTGTGCCAAGCAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CCA 90 bp | ATTAAAGCTCTTCAGAATAACGACATGAGGGGCCCTGTTCAGTTTGTACCACGGGGCTGGTGGGCCTTCTaGAAGAAGAGAGGCAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IKALQNNDMRGPVQFVPRGWWAF*KKRGKE Trigger: TTCTTTGCCTCTCTTCTTCCAGAAGGCCCACCAGCC...CCGTGGTACAAACTGAACAGGGCCCCTCATGTCGTTATTCTGAAGAGCTTTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGGTTTTACCTCTGCCAAGTCGCCACCCTCGGTTTAAAGGAAAGCACTGCACATGTAGTACTGCCTTaGATAGATCTGCTGGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: QRFYLCQVATLGLKESTAHVVLP*IDLLEP Trigger: TGGTTCCAGCAGATCTATGCAAGGCAGTACTACATG...TGCAGTGCTTTCCTTTAAACCGAGGGTGGCGACTTGGCAGAGGTAAAACCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 ENSMUST00000211982.2 |
||
| CDS-3UTR CCA 90 bp | ATTGAACAGAAAACTCGGCAAAGGTTTTACCTCTGCCAAGTCGCCACCCTCGGTTATCTCTTGTGCACTTaGTGTCGGGACAAAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IEQKTRQRFYLCQVATLGYLLCT*CRDKSS Trigger: GGAACTTTTGTCCCGACACCAAGTGCACAAGAGATA...ACCGAGGGTGGCGACTTGGCAGAGGTAAAACCTTTGCCGAGTTTTCTGTTCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 ENSMUST00000211982.2 |
||
| CDS-3UTR CCA 90 bp | GTATCTCTTGTGCACTTGGTGTCGGGACAAAAGTTCCTGATGCAGCAGTGGCAGTCGCTTTTCCTGCTTTaGAAGCAAATCTTGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: VSLVHLVSGQKFLMQQWQSLFLL*KQILET Trigger: TGTCTCCAAGATTTGCTTCCAAAGCAGGAAAAGCGA...CTGCCACTGCTGCATCAGGAACTTTTGTCCCGACACCAAGTGCACAAGAGATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161085.8 |
||
| CDS-3UTR TCA 90 bp | CCCTGTTCAGTTTGTACCACGGCTTCATGTCTTAGTTTGTGCTTTTGCTTGGCAAGGCAAAGAAAGTCTTaGAGACTAGCCATGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PCSVCTTASCLSLCFCLARQRKS*RLAMLC Trigger: GCACAGCATGGCTAGTCTTCAAGACTTTCTTTGCCT...TGCCAAGCAAAAGCACAAACTAAGACATGAAGCCGTGGTACAAACTGAACAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR GCA 90 bp | ATTAAAGCTCTTCAGAATAACGACATGAGGGGCCCTGTTCAGTTTGTACCACGGCACAGGTATCTCTTGTaGACTTGGTGTCGGGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: IKALQNNDMRGPVQFVPRHRYLL*TWCRDK Trigger: TTTGTCCCGACACCAAGTGCACAAGAGATACCTGTG...CCGTGGTACAAACTGAACAGGGCCCCTCATGTCGTTATTCTGAAGAGCTTTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR GCA 90 bp | GTATACATTAAAGCTCTTCAGAATAACGACATGAGGGGCCCTGTTCAGTTTGTACAGGGGGCCACCTTGTaGATTCATCCGCAAGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VYIKALQNNDMRGPVQFVQGATL*IHPQVL Trigger: CAGAACTTGCGGATGAATGCACAAGGTGGCCCCCTG...TACAAACTGAACAGGGCCCCTCATGTCGTTATTCTGAAGAGCTTTAATGTATAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CCA 90 bp | TGCATCTATGACTTCCATGTAGAGCACACATGCACACACGTCTATGACTTCCATCAGCACCCTTTGTGCTaGTTTCTGGCATTTTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CIYDFHVEHTCTHVYDFHQHPLC*FLAFWR Trigger: CCTCCAAAATGCCAGAAACCAGCACAAAGGGTGCTG...ATGGAAGTCATAGACGTGTGTGCATGTGTGCTCTACATGGAAGTCATAGATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CCA 90 bp | GTATACATTAAAGCTCTTCAGAATAACGACATGAGGGGCCCTGTTCAGTTTGTACAGCTGCATTCTGATTaGCCGGCTGGTTTTCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VYIKALQNNDMRGPVQFVQLHSD*PAGFLP Trigger: CGGCAGAAAACCAGCCGGCCAATCAGAATGCAGCTG...TACAAACTGAACAGGGCCCCTCATGTCGTTATTCTGAAGAGCTTTAATGTATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGGTTTTACCTCTGCCAAGTCGCCACCCTCGGTTTAAAGGAAAGCACTGCATCGCTTTTCCTGCTTTaGAAGCAAATCTTGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: QRFYLCQVATLGLKESTASLFLL*KQILET Trigger: TGTCTCCAAGATTTGCTTCCAAAGCAGGAAAAGCGA...TGCAGTGCTTTCCTTTAAACCGAGGGTGGCGACTTGGCAGAGGTAAAACCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161576.8 |
||
| 3UTR CAA 72 bp | CAAAACATGTCGCTTTTCCTGCTTTGGAAGCAAATCTaGGAGACACTGGTGATCCAACAGCAGCTTCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QNMSLFLLWKQI*ETLVIQQQLPR Trigger: TCTGGGAAGCTGCTGTTGGATCACCAGTGTCTCCAAGATTTGCTTCCAAAGCAGGAAAAGCGACATGTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159450.2 |
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| CDS-3UTR GCA 90 bp | CACTTGGTGTCGGGACAAAAGTTCCTGATGCAGCAGTGGCAGCTAAGTATTGCAAGGGATTCTTCACATTaGACACAAGGTGCAAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: HLVSGQKFLMQQWQLSIARDSSH*TQGAKH Trigger: ATGTTTTGCACCTTGTGTGCAATGTGAAGAATCCCT...TGCAATACTTAGCTGCCACTGCTGCATCAGGAACTTTTGTCCCGACACCAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161085.8 |
||
| CDS-3UTR GCA 90 bp | GTATACATTAAAGCTCTTCAGAATAACGACATGAGGGGCCCTGTTCAGTTTGTATTAGAGTTGTCCGGCTaGTCTGTGGATTCAGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: VYIKALQNNDMRGPVQFVLELSG*SVDSAP Trigger: GGGTGCTGAATCCACAGAGCAGCCGGACAACTCTAA...TACAAACTGAACAGGGCCCCTCATGTCGTTATTCTGAAGAGCTTTAATGTATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR GCA 90 bp | CATGCGACCCTGGGCCTTCTGCTTACAGTGCCTATGAAACTACATACAGTATACCGAAGAACTTCTCTTTaGCGTAAACCATCACTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HATLGLLLTVPMKLHTVYRRTSL*RKPSLE Trigger: CTCAAGTGATGGTTTACGGCAAAGAGAAGTTCTTCG...GTATACTGTATGTAGTTTCATAGGCACTGTAAGCAGAAGGCCCAGGGTCGCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR GCA 90 bp | ACTTTATTGAACAGAAAACTCGGCAAAGGTTTTACCTCTGCCAAGTCGCCACCCCATGTAGTACTGCCTTaGATAGATCTGCTGGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: TLLNRKLGKGFTSAKSPPHVVLP*IDLLEP Trigger: TGGTTCCAGCAGATCTATGCAAGGCAGTACTACATG...GGGTGGCGACTTGGCAGAGGTAAAACCTTTGCCGAGTTTTCTGTTCAATAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 ENSMUST00000211982.2 |
||
| CDS-3UTR GCA 90 bp | TTACCTCTGCCAAGTCGCCACCCTCGGTTTAAAGGAAAGCACTGCATTTTAAAACACAGGTATCTCTTGTaGACTTGGTGTCGGGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: LPLPSRHPRFKGKHCILKHRYLL*TWCRDK Trigger: TTTGTCCCGACACCAAGTGCACAAGAGATACCTGTG...TTTTAAAATGCAGTGCTTTCCTTTAAACCGAGGGTGGCGACTTGGCAGAGGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 ENSMUST00000211982.2 |
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| CDS-3UTR CCA 90 bp | GGCCCTGTTCAGTTTGTACCACGGCTTCATGTCTTAGTTTGTGCTTTTGCTTGGTGGTTTCTGGCATTTTaGAGGGATTCTTCACATTGC | + |
|
Preference number: 4 (lower is better) Translates to: GPVQFVPRLHVLVCAFAWWFLAF*RDSSHC Trigger: GCAATGTGAAGAATCCCTCCAAAATGCCAGAAACCA...CCAAGCAAAAGCACAAACTAAGACATGAAGCCGTGGTACAAACTGAACAGGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CCA 90 bp | ACGTCGCTGCGGAATAGGTCCAATCCAACCAGTCTCGGTTTATCTCATCATCTTTGGTTTCTGGCATTTTaGAGGGATTCTTCACATTGC | + |
|
Preference number: 4 (lower is better) Translates to: TSLRNRSNPTSLGLSHHLWFLAF*RDSSHC Trigger: GCAATGTGAAGAATCCCTCCAAAATGCCAGAAACCA...AAGATGATGAGATAAACCGAGACTGGTTGGATTGGACCTATTCCGCAGCGACGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161085.8 |
||
| CDS-3UTR CCA 90 bp | TTGGCACAGAAGCACATGTCATCCTGTGGGTTTTCAATGACTCTGTCGAGTCCACTTTGTGCTGGTTTCTaGCATTTTGGAGGGATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LAQKHMSSCGFSMTLSSPLCAGF*HFGGIL Trigger: AAGAATCCCTCCAAAATGCCAGAAACCAGCACAAAG...TGGACTCGACAGAGTCATTGAAAACCCACAGGATGACATGTGCTTCTGTGCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CCA 90 bp | ATTAAAGCTCTTCAGAATAACGACATGAGGGGCCCTGTTCAGTTTGTACCACGGTATCTCTTGTGCACTTaGTGTCGGGACAAAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IKALQNNDMRGPVQFVPRYLLCT*CRDKSS Trigger: GGAACTTTTGTCCCGACACCAAGTGCACAAGAGATA...CCGTGGTACAAACTGAACAGGGCCCCTCATGTCGTTATTCTGAAGAGCTTTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR TCA 90 bp | ACTTTATTGAACAGAAAACTCGGCAAAGGTTTTACCTCTGCCAAGTCGCCACCCAGAAGTAAAGGATGCTaGGGAAAACAGAAAACGTCG | + |
|
Preference number: 4 (lower is better) Translates to: TLLNRKLGKGFTSAKSPPRSKGC*GKQKTS Trigger: CGACGTTTTCTGTTTTCCTCAGCATCCTTTACTTCT...GGGTGGCGACTTGGCAGAGGTAAAACCTTTGCCGAGTTTTCTGTTCAATAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 ENSMUST00000211982.2 |
||
| CDS-3UTR GCA 90 bp | TTGGCACAGAAGCACATGTCATCCTGTGGGTTTTCAATGACTCTGTCGAGTCCAAGGGATTCTTCACATTaGACACAAGGTGCAAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: LAQKHMSSCGFSMTLSSPRDSSH*TQGAKH Trigger: ATGTTTTGCACCTTGTGTGCAATGTGAAGAATCCCT...TGGACTCGACAGAGTCATTGAAAACCCACAGGATGACATGTGCTTCTGTGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR GCA 90 bp | TTACCTCTGCCAAGTCGCCACCCTCGGTTTAAAGGAAAGCACTGCATTTTAAAAAACAGAAAACGTCGCTaGGGAATAGGTCCAATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LPLPSRHPRFKGKHCILKNRKRR*GIGPIQ Trigger: TTGGATTGGACCTATTCCGCAGCGACGTTTTCTGTT...TTTTAAAATGCAGTGCTTTCCTTTAAACCGAGGGTGGCGACTTGGCAGAGGTAA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 ENSMUST00000211982.2 |
||
| CDS-3UTR CCA 90 bp | ATTAAAGCTCTTCAGAATAACGACATGAGGGGCCCTGTTCAGTTTGTACCACGGCTTTGTGCTGGTTTCTaGCATTTTGGAGGGATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IKALQNNDMRGPVQFVPRLCAGF*HFGGIL Trigger: AAGAATCCCTCCAAAATGCCAGAAACCAGCACAAAG...CCGTGGTACAAACTGAACAGGGCCCCTCATGTCGTTATTCTGAAGAGCTTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR TCA 90 bp | TTACCTCTGCCAAGTCGCCACCCTCGGTTTAAAGGAAAGCACTGCATTTTAAAAAGAAGTAAAGGATGCTaGGGAAAACAGAAAACGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LPLPSRHPRFKGKHCILKRSKGC*GKQKTS Trigger: CGACGTTTTCTGTTTTCCTCAGCATCCTTTACTTCT...TTTTAAAATGCAGTGCTTTCCTTTAAACCGAGGGTGGCGACTTGGCAGAGGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 ENSMUST00000211982.2 |
||
| CDS-3UTR GCA 90 bp | ACTTTATTGAACAGAAAACTCGGCAAAGGTTTTACCTCTGCCAAGTCGCCACCCCATGTACAGCACACATaGACACACATCATGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: TLLNRKLGKGFTSAKSPPHVQHT*THIMRN Trigger: ATTTCTCATGATGTGTGTGCATGTGTGCTGTACATG...GGGTGGCGACTTGGCAGAGGTAAAACCTTTGCCGAGTTTTCTGTTCAATAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000211982.2 |
||
| CDS-3UTR GCA 90 bp | GTATACATTAAAGCTCTTCAGAATAACGACATGAGGGGCCCTGTTCAGTTTGTAAACAGAAAACGTCGCTaGGGAATAGGTCCAATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VYIKALQNNDMRGPVQFVNRKRR*GIGPIQ Trigger: TTGGATTGGACCTATTCCGCAGCGACGTTTTCTGTT...TACAAACTGAACAGGGCCCCTCATGTCGTTATTCTGAAGAGCTTTAATGTATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS TCA 90 bp | CCTCTGGACGCGGGCGCTCGGGGTAGACTCGGCTCAGGTGGGCCTTaGGGCGACTCACACTCCAACTGCGGTCGCCACTCAGCTCCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: PLDAGARGRLGSGGP*GDSHSNCGRHSAPS Trigger: ACTTGGAGCTGAGTGGCGACCGCAGTTGGAGTGTGAGTCGCCTCAAGGCCCACCTGAGCCGAGTCTACCCCGAGCGCCCGCGTCCAGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS TCA 90 bp | ACACTCCAACTGCGGTCGCCACTCAGCTCCAAGTCGCGGTGGCGCTaGTTGGGACTCTTCACCAGCAGCGTGACCGGCTCGGGCTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TLQLRSPLSSKSRWR*LGLFTSSVTGSGCG Trigger: GCCACAGCCCGAGCCGGTCACGCTGCTGGTGAAGAGTCCCAATCAGCGCCACCGCGACTTGGAGCTGAGTGGCGACCGCAGTTGGAGTGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CAA 90 bp | CTCTGTCGAGTCCACGCCAGGGGAGGAAAAGGAGCCGGAGCCAGACGATCCAGTCCTCCCTGGAGGTTATaGTTGGGGTCCTGGTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LCRVHARGGKGAGARRSSPPWRL*LGSWLA Trigger: TGCCAACCAGGACCCCAACAATAACCTCCAGGGAGG...ACTGGATCGTCTGGCTCCGGCTCCTTTTCCTCCCCTGGCGTGGACTCGACAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CAA 90 bp | AGGTGCTCAGGCAGAACATGCGACCCTGGGCCTTCTGCTTACAGTGCCTATGAAGCCAGGCCCCAGGCCTaGGAAAGTCTGCTGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: RCSGRTCDPGPSAYSAYEARPQA*ESLLDS Trigger: GCTGTCCAGCAGACTTTCCAAGGCCTGGGGCCTGGC...TTCATAGGCACTGTAAGCAGAAGGCCCAGGGTCGCATGTTCTGCCTGAGCACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CAA 90 bp | AAAGGAGCCGGAGCCAGACGATCCAGTCCGAGCTGTCAAAGCCACCAGCGACAGGCAGCCACCCATACGTaGTGTAGCCAGAGAAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KGAGARRSSPSCQSHQRQAATHT*CSQRSQ Trigger: CTGGCTTCTCTGGCTACACAACGTATGGGTGGCTGC...CTGTCGCTGGTGGCTTTGACAGCTCGGACTGGATCGTCTGGCTCCGGCTCCTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS TCA 90 bp | TCCTGGTTGGCAGCATCTCGAGGACCACCATCATCCGGGAAGTTCTaGACTGGCCTCTGTCTGAACGGAAACCACCCGACGTGGTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SWLAASRGPPSSGKF*TGLCLNGNHPTWCR Trigger: CCTGCACCACGTCGGGTGGTTTCCGTTCAGACAGAGGCCAGTTCAGAACTTCCCGGATGATGGTGGTCCTCGAGATGCTGCCAACCAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CAA 90 bp | CACACATCTGGGGAGGTGCTCAGGCAGAACATGCGACCCTGGGCCTTCTGCTTAGACCACAGGTATCTCTaGTGCACTTGGTGTCGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: HTSGEVLRQNMRPWAFCLDHRYL*CTWCRD Trigger: GTCCCGACACCAAGTGCACAAGAGATACCTGTGGTC...TAAGCAGAAGGCCCAGGGTCGCATGTTCTGCCTGAGCACCTCCCCAGATGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS CCA 90 bp | GTTGGCAGCATCTCGAGGACCACCATCATCCGGGAAGTTCTGAACTaGCCTCTGTCTGAACGGAAACCACCCGACGTGGTGCAGGTACAT | + |
|
Preference number: 5 (lower is better) Translates to: VGSISRTTIIREVLN*PLSERKPPDVVQVH Trigger: ATGTACCTGCACCACGTCGGGTGGTTTCCGTTCAGACAGAGGCCAGTTCAGAACTTCCCGGATGATGGTGGTCCTCGAGATGCTGCCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CAA 90 bp | ATTGAACAGAAAACTCGGCAAAGGTTTTACCTCTGCCAAGTCGCCACCCTCGGTGCCAGGCCCCAGGCCTaGGAAAGTCTGCTGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: IEQKTRQRFYLCQVATLGARPQA*ESLLDS Trigger: GCTGTCCAGCAGACTTTCCAAGGCCTGGGGCCTGGC...ACCGAGGGTGGCGACTTGGCAGAGGTAAAACCTTTGCCGAGTTTTCTGTTCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 ENSMUST00000211982.2 |
||
| CDS-3UTR CAA 90 bp | CACATGCACACACATCTGGGGAGGTGCTCAGGCAGAACATGCGACCCTGGGCCTGCATGTAGTACTGCCTaGCATAGATCTGCTGGAACC | + |
|
Preference number: 5 (lower is better) Translates to: HMHTHLGRCSGRTCDPGPACSTA*HRSAGT Trigger: GGTTCCAGCAGATCTATGCAAGGCAGTACTACATGC...AGGCCCAGGGTCGCATGTTCTGCCTGAGCACCTCCCCAGATGTGTGTGCATGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CAA 90 bp | CACATGCACACACATCTGGGGAGGTGCTCAGGCAGAACATGCGACCCTGGGCCTTGGATTCAGCACCCTTaGTGCTGGTTTCTGGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: HMHTHLGRCSGRTCDPGPWIQHP*CWFLAF Trigger: AAATGCCAGAAACCAGCACAAAGGGTGCTGAATCCA...AGGCCCAGGGTCGCATGTTCTGCCTGAGCACCTCCCCAGATGTGTGTGCATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CAA 90 bp | AAGCACATGTCATCCTGTGGGTTTTCAATGACTCTGTCGAGTCCACGCCAGGGGGCAGCCACCCATACGTaGTGTAGCCAGAGAAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KHMSSCGFSMTLSSPRQGAATHT*CSQRSQ Trigger: CTGGCTTCTCTGGCTACACAACGTATGGGTGGCTGC...CCCCTGGCGTGGACTCGACAGAGTCATTGAAAACCCACAGGATGACATGTGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CAA 90 bp | CACACATCTGGGGAGGTGCTCAGGCAGAACATGCGACCCTGGGCCTTCTGCTTAGGGATTGACAACCGCTaGAGCAGCTGCATTCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: HTSGEVLRQNMRPWAFCLGIDNR*SSCILI Trigger: AATCAGAATGCAGCTGCTCAAGCGGTTGTCAATCCC...TAAGCAGAAGGCCCAGGGTCGCATGTTCTGCCTGAGCACCTCCCCAGATGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CAA 90 bp | AAGCACATGTCATCCTGTGGGTTTTCAATGACTCTGTCGAGTCCACGCCAGGGGGACCACAGGTATCTCTaGTGCACTTGGTGTCGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: KHMSSCGFSMTLSSPRQGDHRYL*CTWCRD Trigger: GTCCCGACACCAAGTGCACAAGAGATACCTGTGGTC...CCCCTGGCGTGGACTCGACAGAGTCATTGAAAACCCACAGGATGACATGTGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CAA 90 bp | CACACATCTGGGGAGGTGCTCAGGCAGAACATGCGACCCTGGGCCTTCTGCTTACTTTGGAAGCAAATCTaGGAGACACTGGTGATCCAA | + |
|
Preference number: 5 (lower is better) Translates to: HTSGEVLRQNMRPWAFCLLWKQI*ETLVIQ Trigger: TTGGATCACCAGTGTCTCCAAGATTTGCTTCCAAAG...TAAGCAGAAGGCCCAGGGTCGCATGTTCTGCCTGAGCACCTCCCCAGATGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CAA 90 bp | TTACCTCTGCCAAGTCGCCACCCTCGGTTTAAAGGAAAGCACTGCATTTTAAAAGCCAGGCCCCAGGCCTaGGAAAGTCTGCTGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: LPLPSRHPRFKGKHCILKARPQA*ESLLDS Trigger: GCTGTCCAGCAGACTTTCCAAGGCCTGGGGCCTGGC...TTTTAAAATGCAGTGCTTTCCTTTAAACCGAGGGTGGCGACTTGGCAGAGGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 ENSMUST00000211982.2 |
||
| CDS-3UTR CAA 90 bp | CAGAAAACTCGGCAAAGGTTTTACCTCTGCCAAGTCGCCACCCTCGGTTTAAAGGCAGCCACCCATACGTaGTGTAGCCAGAGAAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QKTRQRFYLCQVATLGLKAATHT*CSQRSQ Trigger: CTGGCTTCTCTGGCTACACAACGTATGGGTGGCTGC...CTTTAAACCGAGGGTGGCGACTTGGCAGAGGTAAAACCTTTGCCGAGTTTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 ENSMUST00000211982.2 |
||
| CDS-3UTR CAA 90 bp | ATTGAACAGAAAACTCGGCAAAGGTTTTACCTCTGCCAAGTCGCCACCCTCGGTCACCAGGGGGCCACCTaGTGCATTCATCCGCAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: IEQKTRQRFYLCQVATLGHQGAT*CIHPQV Trigger: AACTTGCGGATGAATGCACAAGGTGGCCCCCTGGTG...ACCGAGGGTGGCGACTTGGCAGAGGTAAAACCTTTGCCGAGTTTTCTGTTCAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 ENSMUST00000211982.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGGTTTTACCTCTGCCAAGTCGCCACCCTCGGTTTAAAGGAAAGCACTGCATTGTTGGGGTCCTGGTaGGCAGCATCTCGAGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: QRFYLCQVATLGLKESTALLGSW*AASRGP Trigger: TGGTCCTCGAGATGCTGCCAACCAGGACCCCAACAA...TGCAGTGCTTTCCTTTAAACCGAGGGTGGCGACTTGGCAGAGGTAAAACCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CAA 90 bp | GCCGGCTGGTTTTCTGCCGGAAACTGGTTGTGTATAGGAGCCGGAGCAGGTGTACTTTGGAAGCAAATCTaGGAGACACTGGTGATCCAA | + |
|
Preference number: 5 (lower is better) Translates to: AGWFSAGNWLCIGAGAGVLWKQI*ETLVIQ Trigger: TTGGATCACCAGTGTCTCCAAGATTTGCTTCCAAAG...TACACCTGCTCCGGCTCCTATACACAACCAGTTTCCGGCAGAAAACCAGCCGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161085.8 |
||
| CDS-3UTR CAA 90 bp | TTGGCACAGAAGCACATGTCATCCTGTGGGTTTTCAATGACTCTGTCGAGTCCACACCAGGGGGCCACCTaGTGCATTCATCCGCAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LAQKHMSSCGFSMTLSSPHQGAT*CIHPQV Trigger: AACTTGCGGATGAATGCACAAGGTGGCCCCCTGGTG...TGGACTCGACAGAGTCATTGAAAACCCACAGGATGACATGTGCTTCTGTGCCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CAA 90 bp | GGCCCTGTTCAGTTTGTACCACGGCTTCATGTCTTAGTTTGTGCTTTTGCTTGGCACCAGGGGGCCACCTaGTGCATTCATCCGCAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: GPVQFVPRLHVLVCAFAWHQGAT*CIHPQV Trigger: AACTTGCGGATGAATGCACAAGGTGGCCCCCTGGTG...CCAAGCAAAAGCACAAACTAAGACATGAAGCCGTGGTACAAACTGAACAGGGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CAA 90 bp | ATTAAAGCTCTTCAGAATAACGACATGAGGGGCCCTGTTCAGTTTGTACCACGGCCCTGGAGGTTATTGTaGGGGTCCTGGTTGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: IKALQNNDMRGPVQFVPRPWRLL*GSWLAA Trigger: TGCTGCCAACCAGGACCCCAACAATAACCTCCAGGG...CCGTGGTACAAACTGAACAGGGCCCCTCATGTCGTTATTCTGAAGAGCTTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CAA 90 bp | ACTTTATTGAACAGAAAACTCGGCAAAGGTTTTACCTCTGCCAAGTCGCCACCCCCCTGGAGGTTATTGTaGGGGTCCTGGTTGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TLLNRKLGKGFTSAKSPPPWRLL*GSWLAA Trigger: TGCTGCCAACCAGGACCCCAACAATAACCTCCAGGG...GGGTGGCGACTTGGCAGAGGTAAAACCTTTGCCGAGTTTTCTGTTCAATAAAGT 51% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CAA 90 bp | CTTTTGCTTGGCACAGAAGCACATGTCATCCTGTGGGTTTTCAATGACTCTGTCCCTCCCTGGAGGTTATaGTTGGGGTCCTGGTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLLGTEAHVILWVFNDSVPPWRL*LGSWLA Trigger: TGCCAACCAGGACCCCAACAATAACCTCCAGGGAGG...GACAGAGTCATTGAAAACCCACAGGATGACATGTGCTTCTGTGCCAAGCAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CAA 90 bp | ATTCATCCGCAAGTTCTGATTGGCTCCGGGATTGACAACCGCTTGAGCAGCTGCGTCGCTTTTCCTGCTTaGGAAGCAAATCTTGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: IHPQVLIGSGIDNRLSSCVAFPA*EANLGD Trigger: GTCTCCAAGATTTGCTTCCAAAGCAGGAAAAGCGAC...GCAGCTGCTCAAGCGGTTGTCAATCCCGGAGCCAATCAGAACTTGCGGATGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161085.8 |
||
| CDS-3UTR CAA 90 bp | CAAAGGTTTTACCTCTGCCAAGTCGCCACCCTCGGTTTAAAGGAAAGCACTGCAGCATGTAGTACTGCCTaGCATAGATCTGCTGGAACC | + |
|
Preference number: 5 (lower is better) Translates to: QRFYLCQVATLGLKESTAACSTA*HRSAGT Trigger: GGTTCCAGCAGATCTATGCAAGGCAGTACTACATGC...TGCAGTGCTTTCCTTTAAACCGAGGGTGGCGACTTGGCAGAGGTAAAACCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 ENSMUST00000211982.2 |
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| CDS-3UTR CAA 90 bp | ACTTTATTGAACAGAAAACTCGGCAAAGGTTTTACCTCTGCCAAGTCGCCACCCGACCACAGGTATCTCTaGTGCACTTGGTGTCGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: TLLNRKLGKGFTSAKSPPDHRYL*CTWCRD Trigger: GTCCCGACACCAAGTGCACAAGAGATACCTGTGGTC...GGGTGGCGACTTGGCAGAGGTAAAACCTTTGCCGAGTTTTCTGTTCAATAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 ENSMUST00000211982.2 |
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| CDS-3UTR CAA 90 bp | CAGAAAACTCGGCAAAGGTTTTACCTCTGCCAAGTCGCCACCCTCGGTTTAAAGGGGATTGACAACCGCTaGAGCAGCTGCATTCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: QKTRQRFYLCQVATLGLKGIDNR*SSCILI Trigger: AATCAGAATGCAGCTGCTCAAGCGGTTGTCAATCCC...CTTTAAACCGAGGGTGGCGACTTGGCAGAGGTAAAACCTTTGCCGAGTTTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 ENSMUST00000211982.2 |
||
| CDS-3UTR CAA 90 bp | TGCATCTATGACTTCCATGTAGAGCACACATGCACACACGTCTATGACTTCCATTTGTTGGGGTCCTGGTaGGCAGCATCTCGAGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: CIYDFHVEHTCTHVYDFHLLGSW*AASRGP Trigger: TGGTCCTCGAGATGCTGCCAACCAGGACCCCAACAA...ATGGAAGTCATAGACGTGTGTGCATGTGTGCTCTACATGGAAGTCATAGATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CAA 90 bp | TCTTGTGCACTTGGTGTCGGGACAAAAGTTCCTGATGCAGCAGTGGCAGCTAAGGAGGGATTCTTCACATaGCACACAAGGTGCAAAACA | + |
|
Preference number: 5 (lower is better) Translates to: SCALGVGTKVPDAAVAAKEGFFT*HTRCKT Trigger: TGTTTTGCACCTTGTGTGCAATGTGAAGAATCCCTC...CTTAGCTGCCACTGCTGCATCAGGAACTTTTGTCCCGACACCAAGTGCACAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161085.8 |
||
| CDS-3UTR CAA 90 bp | CAAAGGTTTTACCTCTGCCAAGTCGCCACCCTCGGTTTAAAGGAAAGCACTGCATGGATTCAGCACCCTTaGTGCTGGTTTCTGGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: QRFYLCQVATLGLKESTAWIQHP*CWFLAF Trigger: AAATGCCAGAAACCAGCACAAAGGGTGCTGAATCCA...TGCAGTGCTTTCCTTTAAACCGAGGGTGGCGACTTGGCAGAGGTAAAACCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CAA 90 bp | ATTAAAGCTCTTCAGAATAACGACATGAGGGGCCCTGTTCAGTTTGTACCACGGGCATGTAGTACTGCCTaGCATAGATCTGCTGGAACC | + |
|
Preference number: 5 (lower is better) Translates to: IKALQNNDMRGPVQFVPRACSTA*HRSAGT Trigger: GGTTCCAGCAGATCTATGCAAGGCAGTACTACATGC...CCGTGGTACAAACTGAACAGGGCCCCTCATGTCGTTATTCTGAAGAGCTTTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CAA 90 bp | CATGCGACCCTGGGCCTTCTGCTTACAGTGCCTATGAAACTACATACAGTATACGTATCTCTTGTGCACTaGGTGTCGGGACAAAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: HATLGLLLTVPMKLHTVYVSLVH*VSGQKF Trigger: GAACTTTTGTCCCGACACCAAGTGCACAAGAGATAC...GTATACTGTATGTAGTTTCATAGGCACTGTAAGCAGAAGGCCCAGGGTCGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CAA 90 bp | TTGGCACAGAAGCACATGTCATCCTGTGGGTTTTCAATGACTCTGTCGAGTCCAGTCGCTTTTCCTGCTTaGGAAGCAAATCTTGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LAQKHMSSCGFSMTLSSPVAFPA*EANLGD Trigger: GTCTCCAAGATTTGCTTCCAAAGCAGGAAAAGCGAC...TGGACTCGACAGAGTCATTGAAAACCCACAGGATGACATGTGCTTCTGTGCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161576.8 |
||
| CDS GCA 90 bp | CGAGGAGTAGAAGTAAAGGATGCTGAGGAAAACAGAAAACGTCGCTaGGGAATAGGTCCAATCCAACCAGTCTCGGTTTATCTCATCATC | + |
|
Preference number: 5 (lower is better) Translates to: RGVEVKDAEENRKRR*GIGPIQPVSVYLII Trigger: GATGATGAGATAAACCGAGACTGGTTGGATTGGACCTATTCCGCAGCGACGTTTTCTGTTTTCCTCAGCATCCTTTACTTCTACTCCTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 ENSMUST00000211982.2 |
||
| CDS-3UTR CAA 90 bp | GGCCCTGTTCAGTTTGTACCACGGCTTCATGTCTTAGTTTGTGCTTTTGCTTGGCTTTGGAAGCAAATCTaGGAGACACTGGTGATCCAA | + |
|
Preference number: 5 (lower is better) Translates to: GPVQFVPRLHVLVCAFAWLWKQI*ETLVIQ Trigger: TTGGATCACCAGTGTCTCCAAGATTTGCTTCCAAAG...CCAAGCAAAAGCACAAACTAAGACATGAAGCCGTGGTACAAACTGAACAGGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CAA 90 bp | CCCTGTTCAGTTTGTACCACGGCTTCATGTCTTAGTTTGTGCTTTTGCTTGGCAGTATCTCTTGTGCACTaGGTGTCGGGACAAAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PCSVCTTASCLSLCFCLAVSLVH*VSGQKF Trigger: GAACTTTTGTCCCGACACCAAGTGCACAAGAGATAC...TGCCAAGCAAAAGCACAAACTAAGACATGAAGCCGTGGTACAAACTGAACAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CAA 90 bp | ACTTTATTGAACAGAAAACTCGGCAAAGGTTTTACCTCTGCCAAGTCGCCACCCGTATCTCTTGTGCACTaGGTGTCGGGACAAAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: TLLNRKLGKGFTSAKSPPVSLVH*VSGQKF Trigger: GAACTTTTGTCCCGACACCAAGTGCACAAGAGATAC...GGGTGGCGACTTGGCAGAGGTAAAACCTTTGCCGAGTTTTCTGTTCAATAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 ENSMUST00000211982.2 |
||
| CDS-3UTR CAA 90 bp | TGCATCTATGACTTCCATGTAGAGCACACATGCACACACGTCTATGACTTCCATGGGATTGACAACCGCTaGAGCAGCTGCATTCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: CIYDFHVEHTCTHVYDFHGIDNR*SSCILI Trigger: AATCAGAATGCAGCTGCTCAAGCGGTTGTCAATCCC...ATGGAAGTCATAGACGTGTGTGCATGTGTGCTCTACATGGAAGTCATAGATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS-3UTR CAA 90 bp | CTTTTGCTTGGCACAGAAGCACATGTCATCCTGTGGGTTTTCAATGACTCTGTCGAGGGATTCTTCACATaGCACACAAGGTGCAAAACA | + |
|
Preference number: 5 (lower is better) Translates to: LLLGTEAHVILWVFNDSVEGFFT*HTRCKT Trigger: TGTTTTGCACCTTGTGTGCAATGTGAAGAATCCCTC...GACAGAGTCATTGAAAACCCACAGGATGACATGTGCTTCTGTGCCAAGCAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS TCA 72 bp | GCGGGCGCTCGGGGTAGACTCGGCTCAGGTGGGCCTTaGGGCGACTCACACTCCAACTGCGGTCGCCACTCA | + |
|
Preference number: 6 (lower is better) Translates to: AGARGRLGSGGP*GDSHSNCGRHS Trigger: TGAGTGGCGACCGCAGTTGGAGTGTGAGTCGCCTCAAGGCCCACCTGAGCCGAGTCTACCCCGAGCGCCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS TCA 72 bp | CTGCGGTCGCCACTCAGCTCCAAGTCGCGGTGGCGCTaGTTGGGACTCTTCACCAGCAGCGTGACCGGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: LRSPLSSKSRWR*LGLFTSSVTGS Trigger: CGAGCCGGTCACGCTGCTGGTGAAGAGTCCCAATCAGCGCCACCGCGACTTGGAGCTGAGTGGCGACCGCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS CCA 72 bp | GGGTCCATACCTCCCTGGAGGTTATTGTTGGGGTCCTaGTTGGCAGCATCTCGAGGACCACCATCATCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: GSIPPWRLLLGS*LAASRGPPSSG Trigger: CCCGGATGATGGTGGTCCTCGAGATGCTGCCAACCAGGACCCCAACAATAACCTCCAGGGAGGTATGGACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS TCA 72 bp | GCAGCATCTCGAGGACCACCATCATCCGGGAAGTTCTaGACTGGCCTCTGTCTGAACGGAAACCACCCGACG | + |
|
Preference number: 6 (lower is better) Translates to: AASRGPPSSGKF*TGLCLNGNHPT Trigger: CGTCGGGTGGTTTCCGTTCAGACAGAGGCCAGTTCAGAACTTCCCGGATGATGGTGGTCCTCGAGATGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS CCA 72 bp | TTAACCTCTGGTCCTCTGGACGGCGCCACTGCCGGTTaGAGCTCTAAGGCCACTGTTCAAAGTCCCCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: LTSGPLDGATAG*SSKATVQSPHL Trigger: CAGATGGGGACTTTGAACAGTGGCCTTAGAGCTCCAACCGGCAGTGGCGCCGTCCAGAGGACCAGAGGTTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159450.2 |
||
| CDS CCA 72 bp | ATCTCGAGGACCACCATCATCCGGGAAGTTCTGAACTaGCCTCTGTCTGAACGGAAACCACCCGACGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: ISRTTIIREVLN*PLSERKPPDVV Trigger: CACCACGTCGGGTGGTTTCCGTTCAGACAGAGGCCAGTTCAGAACTTCCCGGATGATGGTGGTCCTCGAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
||
| CDS CAA 72 bp | TCCATACCTCCCTGGAGGTTATTGTTGGGGTCCTGGTaGGCAGCATCTCGAGGACCACCATCATCCGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SIPPWRLLLGSW*AASRGPPSSGK Trigger: CTTCCCGGATGATGGTGGTCCTCGAGATGCTGCCAACCAGGACCCCAACAATAACCTCCAGGGAGGTATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
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| CDS CAA 72 bp | TCCATTTCTGGGTCCATACCTCCCTGGAGGTTATTGTaGGGGTCCTGGTTGGCAGCATCTCGAGGACCACCA | + |
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Preference number: 6 (lower is better) Translates to: SISGSIPPWRLL*GSWLAASRGPP Trigger: TGGTGGTCCTCGAGATGCTGCCAACCAGGACCCCAACAATAACCTCCAGGGAGGTATGGACCCAGAAATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
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| CDS CAA 72 bp | TCTTCCATTTCTGGGTCCATACCTCCCTGGAGGTTATaGTTGGGGTCCTGGTTGGCAGCATCTCGAGGACCA | + |
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Preference number: 6 (lower is better) Translates to: SSISGSIPPWRL*LGSWLAASRGP Trigger: TGGTCCTCGAGATGCTGCCAACCAGGACCCCAACAATAACCTCCAGGGAGGTATGGACCCAGAAATGGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 |
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| CDS TCA 72 bp | GAAATCTGCTCAGCGAGGAGTAGAAGTAAAGGATGCTaGGGAAAACAGAAAACGTCGCTGCGGAATAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: EICSARSRSKGC*GKQKTSLRNRS Trigger: GGACCTATTCCGCAGCGACGTTTTCTGTTTTCCTCAGCATCCTTTACTTCTACTCCTCGCTGAGCAGATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034220.8 ENSMUST00000161576.8 ENSMUST00000211982.2 |
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