Pregenerated sensors for HERC6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029798Ensembl transcript IDs: ENSMUST00000031817.10, ENSMUST00000203840.2
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CTTGGAGGCCAGAGGAGGGTGTTGGATCCCTTAGGACTGGAGTTAAAGACGAGACTGGGAACTGAGCCCTaGTCCTCTGGAAGAGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: LGGQRRVLDPLGLELKTRLGTEP*SSGRAA Trigger: GGCTGCTCTTCCAGAGGACCAGGGCTCAGTTCCCAG...TCTCGTCTTTAACTCCAGTCCTAAGGGATCCAACACCCTCCTCTGGCCTCCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| 3UTR-3UTR CCA 90 bp | GGTGTCTGTTCACGTAAGATATCTATGGTTTCCTCTCTCTGTGACATCTTTGTCAGCCATTGTGGGTGCTaGGAACTGAGCCCTGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: GVCSRKISMVSSLCDIFVSHCGC*ELSPGP Trigger: AGGACCAGGGCTCAGTTCCCAGCACCCACAATGGCT...GACAAAGATGTCACAGAGAGAGGAAACCATAGATATCTTACGTGAACAGACACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| 3UTR-3UTR TCA 90 bp | CTTGGAGGCCAGAGGAGGGTGTTGGATCCCTTAGGACTGGAGTTAAAGACGAGAAGTGATCTTAAACATTaGGCTCTCTCTTTAGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: LGGQRRVLDPLGLELKTRSDLKH*ALSLAH Trigger: GTGAGCTAAAGAGAGAGCTCAATGTTTAAGATCACT...TCTCGTCTTTAACTCCAGTCCTAAGGGATCCAACACCCTCCTCTGGCCTCCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| 3UTR-3UTR TCA 90 bp | TACTTTTCTGTCTATTCTGAGGTACTATATGGACATTCTTTCCTATCAGTCTGTGTGGGTGCTGGGAACTaGGCCCTGGTCCTCTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: YFSVYSEVLYGHSFLSVCVGAGN*ALVLWK Trigger: CTTCCAGAGGACCAGGGCTCAGTTCCCAGCACCCAC...ACAGACTGATAGGAAAGAATGTCCATATAGTACCTCAGAATAGACAGAAAAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| 3UTR-3UTR CCA 90 bp | TTTCGTAGGCATAAAGCTTATTTCCTTAAATTCTCCAATCCCCAGCTGCCCTTCAAGACCTTTCCTTTGTaGCAGACAGCCACAGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: FRRHKAYFLKFSNPQLPFKTFPL*QTATEC Trigger: ACACTCTGTGGCTGTCTGCCACAAAGGAAAGGTCTT...GAAGGGCAGCTGGGGATTGGAGAATTTAAGGAAATAAGCTTTATGCCTACGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203840.2 |
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| 3UTR-3UTR GCA 90 bp | TACTTTTCTGTCTATTCTGAGGTACTATATGGACATTCTTTCCTATCAGTCTGTAGTAGCCATTGTGGGTaGTGGGAACTGAGCCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: YFSVYSEVLYGHSFLSVCSSHCG*WELSPG Trigger: ACCAGGGCTCAGTTCCCAGCACCCACAATGGCTACT...ACAGACTGATAGGAAAGAATGTCCATATAGTACCTCAGAATAGACAGAAAAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| 3UTR-3UTR GCA 90 bp | TACTTTTCTGTCTATTCTGAGGTACTATATGGACATTCTTTCCTATCAGTCTGTCCCGAGGCTGTGAACTaGTGGGAGGTGAATGTTTCT | + |
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Preference number: 2 (lower is better) Translates to: YFSVYSEVLYGHSFLSVCPEAVN*WEVNVS Trigger: AGAAACATTCACCTCCCAGCAGTTCACAGCCTCGGG...ACAGACTGATAGGAAAGAATGTCCATATAGTACCTCAGAATAGACAGAAAAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| 3UTR CCA 72 bp | TCAGAACCGGCTCCCCAAGCGAAGACCTTTCCTTTGTaGCAGACAGCCACAGAGTGTTCCTTCCCACAGCTC | + |
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Preference number: 3 (lower is better) Translates to: SEPAPQAKTFPL*QTATECSFPQL Trigger: GAGCTGTGGGAAGGAACACTCTGTGGCTGTCTGCCACAAAGGAAAGGTCTTCGCTTGGGGAGCCGGTTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203840.2 |
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| 3UTR-3UTR CAA 90 bp | GGTGTCTGTTCACGTAAGATATCTATGGTTTCCTCTCTCTGTGACATCTTTGTCTATCCATGGAATGTCTaGGAGGCCAGAGGAGGGTGT | + |
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Preference number: 3 (lower is better) Translates to: GVCSRKISMVSSLCDIFVYPWNV*EARGGC Trigger: ACACCCTCCTCTGGCCTCCAAGACATTCCATGGATA...GACAAAGATGTCACAGAGAGAGGAAACCATAGATATCTTACGTGAACAGACACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| 3UTR CCA 72 bp | TGTTTTGGTGGCATGTATATCTGTGTACCATATCCATaGAATGTCTTGGAGGCCAGAGGAGGGTGTTGGATC | + |
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Preference number: 3 (lower is better) Translates to: CFGGMYICVPYP*NVLEARGGCWI Trigger: GATCCAACACCCTCCTCTGGCCTCCAAGACATTCCATGGATATGGTACACAGATATACATGCCACCAAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| 3UTR CCA 72 bp | ATGGTTTCCTCTCTCTGTGACATCTTTGTCTGGTACTaGAGCAATGTTGGAATCCGAGAATTAGCTGAAGCG | + |
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Preference number: 3 (lower is better) Translates to: MVSSLCDIFVWY*SNVGIRELAEA Trigger: CGCTTCAGCTAATTCTCGGATTCCAACATTGCTCCAGTACCAGACAAAGATGTCACAGAGAGAGGAAACCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| 3UTR TCA 72 bp | CTGGTACTGGAGCAATGTTGGAATCCGAGAATTAGCTaGAGCGTATTCCCTCTTCTAACGATTCATTTGCTT | + |
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Preference number: 3 (lower is better) Translates to: LVLEQCWNPRIS*SVFPLLTIHLL Trigger: AAGCAAATGAATCGTTAGAAGAGGGAATACGCTTCAGCTAATTCTCGGATTCCAACATTGCTCCAGTACCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| 3UTR TCA 72 bp | GCAGTTTCCTTTAGGCCTTGTTGGCTTTCTCATACATaGCTAGGTGCTACATTTTGCTCAGTTACTTTTCTG | + |
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Preference number: 3 (lower is better) Translates to: AVSFRPCWLSHT*LGATFCSVTFL Trigger: CAGAAAAGTAACTGAGCAAAATGTAGCACCTAGTCATGTATGAGAAAGCCAACAAGGCCTAAAGGAAACTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| 3UTR CCA 72 bp | GGAAGGATTTTGGTGTCTGTTCACGTAAGATATCTATaGTTTCCTCTCTCTGTGACATCTTTGTCTGGTACT | + |
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Preference number: 3 (lower is better) Translates to: GRILVSVHVRYL*FPLSVTSLSGT Trigger: AGTACCAGACAAAGATGTCACAGAGAGAGGAAACCATAGATATCTTACGTGAACAGACACCAAAATCCTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| 3UTR-3UTR CAA 90 bp | GGTGTCTGTTCACGTAAGATATCTATGGTTTCCTCTCTCTGTGACATCTTTGTCGCTTATTTGGTTTCTTaGGAGTCCAGTAAACATCTC | + |
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Preference number: 3 (lower is better) Translates to: GVCSRKISMVSSLCDIFVAYLVS*ESSKHL Trigger: GAGATGTTTACTGGACTCCAAAGAAACCAAATAAGC...GACAAAGATGTCACAGAGAGAGGAAACCATAGATATCTTACGTGAACAGACACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| 3UTR TCA 72 bp | TGGTCCTCTGGAAGAGCAGCCAGTGATCTTAAACATTaGGCTCTCTCTTTAGCTCACAATATTGAACATTTT | + |
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Preference number: 3 (lower is better) Translates to: WSSGRAASDLKH*ALSLAHNIEHF Trigger: AAAATGTTCAATATTGTGAGCTAAAGAGAGAGCTCAATGTTTAAGATCACTGGCTGCTCTTCCAGAGGACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| 3UTR TCA 72 bp | GTGCTACATTTTGCTCAGTTACTTTTCTGTCTATTCTaGGGTACTATATGGACATTCTTTCCTATCAGTCTG | + |
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Preference number: 3 (lower is better) Translates to: VLHFAQLLFCLF*GTIWTFFPISL Trigger: CAGACTGATAGGAAAGAATGTCCATATAGTACCTCAGAATAGACAGAAAAGTAACTGAGCAAAATGTAGCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS-3UTR CCA 90 bp | TTCTCCAATCCCCAGCTGCCCTTCAGAACCGGCTCCCCAAGCGAAGACCTTTCCCTCTGGTCTCTCCTCTaGCCCAGCTGTCCCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: FSNPQLPFRTGSPSEDLSLWSLL*PSCPQL Trigger: CAGCTGGGGACAGCTGGGCCAGAGGAGAGACCAGAG...GGAAAGGTCTTCGCTTGGGGAGCCGGTTCTGAAGGGCAGCTGGGGATTGGAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000203840.2 |
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| CDS-3UTR GCA 90 bp | CTTGGAGGCCAGAGGAGGGTGTTGGATCCCTTAGGACTGGAGTTAAAGACGAGACCGCTGAGAGCCAACTaGCCAGATCTGTTGCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: LGGQRRVLDPLGLELKTRPLRAN*PDLLLP Trigger: GGGGAGCAACAGATCTGGGCAGTTGGCTCTCAGCGG...TCTCGTCTTTAACTCCAGTCCTAAGGGATCCAACACCCTCCTCTGGCCTCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS-3UTR CCA 90 bp | CATATCCATGGAATGTCTTGGAGGCCAGAGGAGGGTGTTGGATCCCTTAGGACTCTCTGGTCTCTCCTCTaGCCCAGCTGTCCCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: HIHGMSWRPEEGVGSLRTLWSLL*PSCPQL Trigger: CAGCTGGGGACAGCTGGGCCAGAGGAGAGACCAGAG...AGTCCTAAGGGATCCAACACCCTCCTCTGGCCTCCAAGACATTCCATGGATATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS-3UTR CCA 90 bp | CAATCCCCAGCTGCCCTTCAGAACCGGCTCCCCAAGCGAAGACCTTTCCTTTGTTTCTGCTCAGGAGCTTaGAAGTCACCTGGCCTTTCG | + |
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Preference number: 4 (lower is better) Translates to: QSPAALQNRLPKRRPFLCFCSGA*KSPGLS Trigger: CGAAAGGCCAGGTGACTTCCAAGCTCCTGAGCAGAA...ACAAAGGAAAGGTCTTCGCTTGGGGAGCCGGTTCTGAAGGGCAGCTGGGGATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203840.2 |
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| CDS-3UTR TCA 90 bp | CTTGGAGGCCAGAGGAGGGTGTTGGATCCCTTAGGACTGGAGTTAAAGACGAGAACAGTGGAAGAACTCTaGACTCACTCCCCCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: LGGQRRVLDPLGLELKTRTVEEL*THSPSL Trigger: GAGGCTGGGGGAGTGAGTTCAGAGTTCTTCCACTGT...TCTCGTCTTTAACTCCAGTCCTAAGGGATCCAACACCCTCCTCTGGCCTCCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS-3UTR CCA 90 bp | CAGAACCGGCTCCCCAAGCGAAGACCTTTCCTTTGTGGCAGACAGCCACAGAGTCAGGAATACACCCTGTaGTTGCTGAACAGTAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: QNRLPKRRPFLCGRQPQSQEYTL*LLNSRS Trigger: GCTCCTACTGTTCAGCAACCACAGGGTGTATTCCTG...ACTCTGTGGCTGTCTGCCACAAAGGAAAGGTCTTCGCTTGGGGAGCCGGTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203840.2 |
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| CDS-3UTR CCA 90 bp | CTTGGAGGCCAGAGGAGGGTGTTGGATCCCTTAGGACTGGAGTTAAAGACGAGATCCTTCTATGAGTTGTaGGCCTCTTTGTCCACTCCT | + |
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Preference number: 4 (lower is better) Translates to: LGGQRRVLDPLGLELKTRSFYEL*ASLSTP Trigger: AGGAGTGGACAAAGAGGCCCACAACTCATAGAAGGA...TCTCGTCTTTAACTCCAGTCCTAAGGGATCCAACACCCTCCTCTGGCCTCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS-3UTR TCA 90 bp | CATATCCATGGAATGTCTTGGAGGCCAGAGGAGGGTGTTGGATCCCTTAGGACTCTTCAGGGCACCAATTaGATGCGGCTTGTAGATTTG | + |
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Preference number: 4 (lower is better) Translates to: HIHGMSWRPEEGVGSLRTLQGTN*MRLVDL Trigger: CAAATCTACAAGCCGCATTCAATTGGTGCCCTGAAG...AGTCCTAAGGGATCCAACACCCTCCTCTGGCCTCCAAGACATTCCATGGATATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS-3UTR TCA 90 bp | CATATCCATGGAATGTCTTGGAGGCCAGAGGAGGGTGTTGGATCCCTTAGGACTCACCAATTCCTTCTATaGGTTGTGGGCCTCTTTGTC | + |
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Preference number: 4 (lower is better) Translates to: HIHGMSWRPEEGVGSLRTHQFLL*VVGLFV Trigger: GACAAAGAGGCCCACAACTCATAGAAGGAATTGGTG...AGTCCTAAGGGATCCAACACCCTCCTCTGGCCTCCAAGACATTCCATGGATATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS-3UTR TCA 90 bp | CATATCCATGGAATGTCTTGGAGGCCAGAGGAGGGTGTTGGATCCCTTAGGACTAGGTCTAGCATCCTGTaGCATGTCAATGATCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: HIHGMSWRPEEGVGSLRTRSSIL*HVNDLG Trigger: CCCAAGATCATTGACATGTCACAGGATGCTAGACCT...AGTCCTAAGGGATCCAACACCCTCCTCTGGCCTCCAAGACATTCCATGGATATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS-3UTR TCA 90 bp | CTTGGAGGCCAGAGGAGGGTGTTGGATCCCTTAGGACTGGAGTTAAAGACGAGAATCCCGTGCTATTGTTaGTTGCAACCTGAAGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: LGGQRRVLDPLGLELKTRIPCYC*LQPEVL Trigger: AAGCACTTCAGGTTGCAATCAACAATAGCACGGGAT...TCTCGTCTTTAACTCCAGTCCTAAGGGATCCAACACCCTCCTCTGGCCTCCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS-3UTR GCA 90 bp | GGTGTCTGTTCACGTAAGATATCTATGGTTTCCTCTCTCTGTGACATCTTTGTCTCTCCAATCCCCAGCTaGCCTTCAGAACCGGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: GVCSRKISMVSSLCDIFVSPIPS*PSEPAP Trigger: GGGAGCCGGTTCTGAAGGGCAGCTGGGGATTGGAGA...GACAAAGATGTCACAGAGAGAGGAAACCATAGATATCTTACGTGAACAGACACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS-3UTR CCA 90 bp | GGTGTCTGTTCACGTAAGATATCTATGGTTTCCTCTCTCTGTGACATCTTTGTCGGCCTTTCGGTACTCTaGTCTCTCCTCTGGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: GVCSRKISMVSSLCDIFVGLSVL*SLLWPS Trigger: GCTGGGCCAGAGGAGAGACCAGAGTACCGAAAGGCC...GACAAAGATGTCACAGAGAGAGGAAACCATAGATATCTTACGTGAACAGACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS-3UTR CCA 90 bp | CTTGGAGGCCAGAGGAGGGTGTTGGATCCCTTAGGACTGGAGTTAAAGACGAGAGAGTTGTCACAAAGTTaGCGTGTGCTCCAGCAAAAA | + |
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Preference number: 4 (lower is better) Translates to: LGGQRRVLDPLGLELKTRELSQS*RVLQQK Trigger: TTTTTGCTGGAGCACACGCCAACTTTGTGACAACTC...TCTCGTCTTTAACTCCAGTCCTAAGGGATCCAACACCCTCCTCTGGCCTCCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS-3UTR TCA 90 bp | CATATCCATGGAATGTCTTGGAGGCCAGAGGAGGGTGTTGGATCCCTTAGGACTGGTTATCTTCTTCACTaGAGGTTTCAGAACACCGGA | + |
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Preference number: 4 (lower is better) Translates to: HIHGMSWRPEEGVGSLRTGYLLH*RFQNTG Trigger: TCCGGTGTTCTGAAACCTTCAGTGAAGAAGATAACC...AGTCCTAAGGGATCCAACACCCTCCTCTGGCCTCCAAGACATTCCATGGATATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS-3UTR GCA 90 bp | CATAAAGCTTATTTCCTTAAATTCTCCAATCCCCAGCTGCCCTTCAGAACCGGCAGGCTTCCGGCTTCCTaGAGCCCAGCTGAAATACAT | + |
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Preference number: 4 (lower is better) Translates to: HKAYFLKFSNPQLPFRTGRLPAS*SPAEIH Trigger: ATGTATTTCAGCTGGGCTGCAGGAAGCCGGAAGCCT...GCCGGTTCTGAAGGGCAGCTGGGGATTGGAGAATTTAAGGAAATAAGCTTTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203840.2 |
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| CDS-3UTR CCA 90 bp | CATATCCATGGAATGTCTTGGAGGCCAGAGGAGGGTGTTGGATCCCTTAGGACTAGACTTCACCTTCTGTaGAATAGCTTGAGAACGGGA | + |
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Preference number: 4 (lower is better) Translates to: HIHGMSWRPEEGVGSLRTRLHLL*NSLRTG Trigger: TCCCGTTCTCAAGCTATTCCACAGAAGGTGAAGTCT...AGTCCTAAGGGATCCAACACCCTCCTCTGGCCTCCAAGACATTCCATGGATATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS-3UTR CCA 90 bp | CATATCCATGGAATGTCTTGGAGGCCAGAGGAGGGTGTTGGATCCCTTAGGACTATACCACCTGACCAGTaGTGTAGACATATGCAATGG | + |
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Preference number: 4 (lower is better) Translates to: HIHGMSWRPEEGVGSLRTIPPDQ*CRHMQW Trigger: CCATTGCATATGTCTACACCACTGGTCAGGTGGTAT...AGTCCTAAGGGATCCAACACCCTCCTCTGGCCTCCAAGACATTCCATGGATATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS-3UTR CCA 90 bp | CTTGGAGGCCAGAGGAGGGTGTTGGATCCCTTAGGACTGGAGTTAAAGACGAGAGTGTGGAGAACTGTATaGAAGATCTCTGAGCAGATA | + |
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Preference number: 4 (lower is better) Translates to: LGGQRRVLDPLGLELKTRVWRTV*KISEQI Trigger: TATCTGCTCAGAGATCTTCCATACAGTTCTCCACAC...TCTCGTCTTTAACTCCAGTCCTAAGGGATCCAACACCCTCCTCTGGCCTCCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS-3UTR CCA 90 bp | CTTGGAGGCCAGAGGAGGGTGTTGGATCCCTTAGGACTGGAGTTAAAGACGAGACATAGTCTCTCTTGTTaGTTTCATTCACAGGCACAG | + |
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Preference number: 4 (lower is better) Translates to: LGGQRRVLDPLGLELKTRHSLSC*FHSQAQ Trigger: CTGTGCCTGTGAATGAAACCAACAAGAGAGACTATG...TCTCGTCTTTAACTCCAGTCCTAAGGGATCCAACACCCTCCTCTGGCCTCCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS-3UTR TCA 90 bp | CTTGGAGGCCAGAGGAGGGTGTTGGATCCCTTAGGACTGGAGTTAAAGACGAGAGCTTTCTTTAGCATCTaGACCAGTATGTTCAGTGAA | + |
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Preference number: 4 (lower is better) Translates to: LGGQRRVLDPLGLELKTRAFFSI*TSMFSE Trigger: TTCACTGAACATACTGGTTCAGATGCTAAAGAAAGC...TCTCGTCTTTAACTCCAGTCCTAAGGGATCCAACACCCTCCTCTGGCCTCCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS-3UTR GCA 90 bp | CATATCCATGGAATGTCTTGGAGGCCAGAGGAGGGTGTTGGATCCCTTAGGACTAGAAACTTCCAAAGATaGCCAACACGTTCTCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: HIHGMSWRPEEGVGSLRTRNFQR*PTRSQE Trigger: TTCCTGAGAACGTGTTGGGCATCTTTGGAAGTTTCT...AGTCCTAAGGGATCCAACACCCTCCTCTGGCCTCCAAGACATTCCATGGATATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS-3UTR CCA 90 bp | CATATCCATGGAATGTCTTGGAGGCCAGAGGAGGGTGTTGGATCCCTTAGGACTGATGAAGGCACTTTCTaGAAGTTGACAGTTAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: HIHGMSWRPEEGVGSLRTDEGTF*KLTVSL Trigger: AAGGCTAACTGTCAACTTCCAGAAAGTGCCTTCATC...AGTCCTAAGGGATCCAACACCCTCCTCTGGCCTCCAAGACATTCCATGGATATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS-3UTR TCA 90 bp | CTTGGAGGCCAGAGGAGGGTGTTGGATCCCTTAGGACTGGAGTTAAAGACGAGACAGCAAAAATGTCTTTaGCTTCAATATCCACAAGGT | + |
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Preference number: 4 (lower is better) Translates to: LGGQRRVLDPLGLELKTRQQKCL*LQYPQG Trigger: ACCTTGTGGATATTGAAGTCAAAGACATTTTTGCTG...TCTCGTCTTTAACTCCAGTCCTAAGGGATCCAACACCCTCCTCTGGCCTCCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS-3UTR GCA 90 bp | GGTGTCTGTTCACGTAAGATATCTATGGTTTCCTCTCTCTGTGACATCTTTGTCAGGCTTCCGGCTTCCTaGAGCCCAGCTGAAATACAT | + |
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Preference number: 4 (lower is better) Translates to: GVCSRKISMVSSLCDIFVRLPAS*SPAEIH Trigger: ATGTATTTCAGCTGGGCTGCAGGAAGCCGGAAGCCT...GACAAAGATGTCACAGAGAGAGGAAACCATAGATATCTTACGTGAACAGACACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS-3UTR GCA 90 bp | GGTGTCTGTTCACGTAAGATATCTATGGTTTCCTCTCTCTGTGACATCTTTGTCACTGCCCAGATCTGTTaGTCCCCCAGCCAAATGATG | + |
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Preference number: 4 (lower is better) Translates to: GVCSRKISMVSSLCDIFVTAQIC*SPSQMM Trigger: CATCATTTGGCTGGGGGAGCAACAGATCTGGGCAGT...GACAAAGATGTCACAGAGAGAGGAAACCATAGATATCTTACGTGAACAGACACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS-3UTR CCA 90 bp | CATATCCATGGAATGTCTTGGAGGCCAGAGGAGGGTGTTGGATCCCTTAGGACTTGTCCACAGGAAACTTaGATTATTTTTATGCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: HIHGMSWRPEEGVGSLRTCPQET*IIFMPA Trigger: GGCTGGCATAAAAATAATCCAAGTTTCCTGTGGACA...AGTCCTAAGGGATCCAACACCCTCCTCTGGCCTCCAAGACATTCCATGGATATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS-3UTR CCA 90 bp | CTTGGAGGCCAGAGGAGGGTGTTGGATCCCTTAGGACTGGAGTTAAAGACGAGAATTAGTTCTTCGGGCTaGAATTGCCTAATTATATCC | + |
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Preference number: 4 (lower is better) Translates to: LGGQRRVLDPLGLELKTRISSSG*NCLIIS Trigger: GGATATAATTAGGCAATTCCAGCCCGAAGAACTAAT...TCTCGTCTTTAACTCCAGTCCTAAGGGATCCAACACCCTCCTCTGGCCTCCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS-3UTR GCA 90 bp | CTTGGAGGCCAGAGGAGGGTGTTGGATCCCTTAGGACTGGAGTTAAAGACGAGATATGAACATTCTTCCTaGCTCTGCATCAAAGTTAAA | + |
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Preference number: 4 (lower is better) Translates to: LGGQRRVLDPLGLELKTRYEHSS*LCIKVK Trigger: TTTAACTTTGATGCAGAGGCAGGAAGAATGTTCATA...TCTCGTCTTTAACTCCAGTCCTAAGGGATCCAACACCCTCCTCTGGCCTCCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS-3UTR CCA 90 bp | GGTGTCTGTTCACGTAAGATATCTATGGTTTCCTCTCTCTGTGACATCTTTGTCCAGGAATACACCCTGTaGTTGCTGAACAGTAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GVCSRKISMVSSLCDIFVQEYTL*LLNSRS Trigger: GCTCCTACTGTTCAGCAACCACAGGGTGTATTCCTG...GACAAAGATGTCACAGAGAGAGGAAACCATAGATATCTTACGTGAACAGACACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| CDS-3UTR CCA 90 bp | CATATCCATGGAATGTCTTGGAGGCCAGAGGAGGGTGTTGGATCCCTTAGGACTGATTCGGATTATTTCTaGCAGGATTTTCATGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: HIHGMSWRPEEGVGSLRTDSDYF*QDFHGN Trigger: GTTTCCATGAAAATCCTGCCAGAAATAATCCGAATC...AGTCCTAAGGGATCCAACACCCTCCTCTGGCCTCCAAGACATTCCATGGATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| CDS-3UTR CCA 90 bp | TACTTTTCTGTCTATTCTGAGGTACTATATGGACATTCTTTCCTATCAGTCTGTCTCTTTGTCCACTCCTaGGGCTGGGCTGTAGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: YFSVYSEVLYGHSFLSVCLFVHS*GWAVVV Trigger: GACAACTACAGCCCAGCCCCAGGAGTGGACAAAGAG...ACAGACTGATAGGAAAGAATGTCCATATAGTACCTCAGAATAGACAGAAAAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| CDS-3UTR GCA 90 bp | GGTGTCTGTTCACGTAAGATATCTATGGTTTCCTCTCTCTGTGACATCTTTGTCCACAAAGTTGGCGTGTaGTCCAGCAAAAATGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GVCSRKISMVSSLCDIFVHKVGV*SSKNVF Trigger: AAAGACATTTTTGCTGGAGCACACGCCAACTTTGTG...GACAAAGATGTCACAGAGAGAGGAAACCATAGATATCTTACGTGAACAGACACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| CDS-3UTR GCA 90 bp | GGTGTCTGTTCACGTAAGATATCTATGGTTTCCTCTCTCTGTGACATCTTTGTCCATTCTTCCTGCCTCTaGATCAAAGTTAAAGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: GVCSRKISMVSSLCDIFVHSSCL*IKVKDA Trigger: GGCATCTTTAACTTTGATGCAGAGGCAGGAAGAATG...GACAAAGATGTCACAGAGAGAGGAAACCATAGATATCTTACGTGAACAGACACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| CDS-3UTR CCA 90 bp | GGTGTCTGTTCACGTAAGATATCTATGGTTTCCTCTCTCTGTGACATCTTTGTCACAAGTAGAGCTTCTTaGTGTGGAGAACTGTATGGA | + |
|
Preference number: 4 (lower is better) Translates to: GVCSRKISMVSSLCDIFVTSRAS*CGELYG Trigger: TCCATACAGTTCTCCACACCAAGAAGCTCTACTTGT...GACAAAGATGTCACAGAGAGAGGAAACCATAGATATCTTACGTGAACAGACACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| CDS-3UTR CCA 90 bp | GGTGTCTGTTCACGTAAGATATCTATGGTTTCCTCTCTCTGTGACATCTTTGTCGGAGCTCATCTTTTCTaGAAATGCCATGACTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GVCSRKISMVSSLCDIFVGAHLF*KCHDFR Trigger: TCTGAAGTCATGGCATTTCCAGAAAAGATGAGCTCC...GACAAAGATGTCACAGAGAGAGGAAACCATAGATATCTTACGTGAACAGACACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| 3UTR CAA 72 bp | GTAAGATATCTATGGTTTCCTCTCTCTGTGACATCTTaGTCTGGTACTGGAGCAATGTTGGAATCCGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VRYLWFPLSVTS*SGTGAMLESEN Trigger: ATTCTCGGATTCCAACATTGCTCCAGTACCAGACAAAGATGTCACAGAGAGAGGAAACCATAGATATCTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| CDS-3UTR TCA 90 bp | TACTTTTCTGTCTATTCTGAGGTACTATATGGACATTCTTTCCTATCAGTCTGTACTGTTCCTTCCCCATaGAAACACGTGGCCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YFSVYSEVLYGHSFLSVCTVPSP*KHVAIF Trigger: GAAGATGGCCACGTGTTTTCATGGGGAAGGAACAGT...ACAGACTGATAGGAAAGAATGTCCATATAGTACCTCAGAATAGACAGAAAAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| CDS-3UTR GCA 90 bp | TACTTTTCTGTCTATTCTGAGGTACTATATGGACATTCTTTCCTATCAGTCTGTCCTGATGAGTTGGGTTaGTTGTGTGACTTGGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: YFSVYSEVLYGHSFLSVCPDELG*LCDLVH Trigger: GTGGACCAAGTCACACAAGCAACCCAACTCATCAGG...ACAGACTGATAGGAAAGAATGTCCATATAGTACCTCAGAATAGACAGAAAAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| CDS-3UTR GCA 90 bp | GGTGTCTGTTCACGTAAGATATCTATGGTTTCCTCTCTCTGTGACATCTTTGTCCATCTTTTCTGGAAATaGCATGACTTCAGACATCAG | + |
|
Preference number: 4 (lower is better) Translates to: GVCSRKISMVSSLCDIFVHLFWK*HDFRHQ Trigger: CTGATGTCTGAAGTCATGGCATTTCCAGAAAAGATG...GACAAAGATGTCACAGAGAGAGGAAACCATAGATATCTTACGTGAACAGACACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| CDS-3UTR CCA 90 bp | TACTTTTCTGTCTATTCTGAGGTACTATATGGACATTCTTTCCTATCAGTCTGTCCCCATGAAAACACGTaGCCATCTTCTGATAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: YFSVYSEVLYGHSFLSVCPHENT*PSSDKA Trigger: GGCCTTATCAGAAGATGGCCACGTGTTTTCATGGGG...ACAGACTGATAGGAAAGAATGTCCATATAGTACCTCAGAATAGACAGAAAAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| CDS-3UTR CCA 90 bp | GGTGTCTGTTCACGTAAGATATCTATGGTTTCCTCTCTCTGTGACATCTTTGTCTTTCAGTATAAGGTATaGTGGGGAGCTCATCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GVCSRKISMVSSLCDIFVFQYKV*WGAHLF Trigger: GAAAAGATGAGCTCCCCACCATACCTTATACTGAAA...GACAAAGATGTCACAGAGAGAGGAAACCATAGATATCTTACGTGAACAGACACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| CDS-3UTR TCA 90 bp | TACTTTTCTGTCTATTCTGAGGTACTATATGGACATTCTTTCCTATCAGTCTGTGATCGTTATGCCGTATaGACATTCTTCCTGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YFSVYSEVLYGHSFLSVCDRYAV*TFFLPL Trigger: CAGAGGCAGGAAGAATGTTCATACGGCATAACGATC...ACAGACTGATAGGAAAGAATGTCCATATAGTACCTCAGAATAGACAGAAAAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| CDS-3UTR CCA 90 bp | TACTTTTCTGTCTATTCTGAGGTACTATATGGACATTCTTTCCTATCAGTCTGTAAGACCTTTCCTTTGTaGCAGACAGCCACAGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: YFSVYSEVLYGHSFLSVCKTFPL*QTATEC Trigger: ACACTCTGTGGCTGTCTGCCACAAAGGAAAGGTCTT...ACAGACTGATAGGAAAGAATGTCCATATAGTACCTCAGAATAGACAGAAAAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| CDS-3UTR TCA 90 bp | TACTTTTCTGTCTATTCTGAGGTACTATATGGACATTCTTTCCTATCAGTCTGTTCCACTTGTCTTAATTaGCGCAATGTGTCTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: YFSVYSEVLYGHSFLSVCSTCLN*RNVSST Trigger: GGTGGAAGACACATTGCGTCAATTAAGACAAGTGGA...ACAGACTGATAGGAAAGAATGTCCATATAGTACCTCAGAATAGACAGAAAAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| CDS-3UTR TCA 90 bp | TACTTTTCTGTCTATTCTGAGGTACTATATGGACATTCTTTCCTATCAGTCTGTTTACCAGAGACTGGTTaGTTCGGATTATTTCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: YFSVYSEVLYGHSFLSVCLPETG*FGLFLA Trigger: TGCCAGAAATAATCCGAATCAACCAGTCTCTGGTAA...ACAGACTGATAGGAAAGAATGTCCATATAGTACCTCAGAATAGACAGAAAAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| 3UTR CAA 72 bp | TTGTTGGCTTTCTCATACATGACTAGGTGCTACATTTaGCTCAGTTACTTTTCTGTCTATTCTGAGGTACTA | + |
|
Preference number: 4 (lower is better) Translates to: LLAFSYMTRCYI*LSYFSVYSEVL Trigger: TAGTACCTCAGAATAGACAGAAAAGTAACTGAGCAAAATGTAGCACCTAGTCATGTATGAGAAAGCCAACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| 3UTR CAA 72 bp | CCATTAAGAAGTCAAACGTATCTAGGTTTTATCAAATaGGCAGTTTCCTTTAGGCCTTGTTGGCTTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PLRSQTYLGFIK*AVSFRPCWLSH Trigger: ATGAGAAAGCCAACAAGGCCTAAAGGAAACTGCCAATTTGATAAAACCTAGATACGTTTGACTTCTTAATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| CDS-3UTR TCA 90 bp | TACTTTTCTGTCTATTCTGAGGTACTATATGGACATTCTTTCCTATCAGTCTGTCTGTTGTTAACTTCTTaGAGACATCTCTTGCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: YFSVYSEVLYGHSFLSVCLLLTS*RHLLPV Trigger: AACTGGCAAGAGATGTCTTCAAGAAGTTAACAACAG...ACAGACTGATAGGAAAGAATGTCCATATAGTACCTCAGAATAGACAGAAAAGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| CDS-3UTR GCA 90 bp | TACTTTTCTGTCTATTCTGAGGTACTATATGGACATTCTTTCCTATCAGTCTGTCAATTTAGAACTTCTTaGAAATTCCTCCCCAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: YFSVYSEVLYGHSFLSVCQFRTS*KFLPKG Trigger: TCCCTTGGGGAGGAATTTGCAAGAAGTTCTAAATTG...ACAGACTGATAGGAAAGAATGTCCATATAGTACCTCAGAATAGACAGAAAAGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| CDS-3UTR TCA 90 bp | TACTTTTCTGTCTATTCTGAGGTACTATATGGACATTCTTTCCTATCAGTCTGTTTAAGTCCACATCAATaGGATTATTCTCTCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: YFSVYSEVLYGHSFLSVCLSPHQ*DYSLQH Trigger: ATGCTGGAGAGAATAATCTCATTGATGTGGACTTAA...ACAGACTGATAGGAAAGAATGTCCATATAGTACCTCAGAATAGACAGAAAAGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| CDS-3UTR TCA 90 bp | TACTTTTCTGTCTATTCTGAGGTACTATATGGACATTCTTTCCTATCAGTCTGTACTCCATACTGTATTTaGGAGATGATGGCTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YFSVYSEVLYGHSFLSVCTPYCI*EMMAFF Trigger: AAAGAAAGCCATCATCTCTCAAATACAGTATGGAGT...ACAGACTGATAGGAAAGAATGTCCATATAGTACCTCAGAATAGACAGAAAAGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| CDS-3UTR GCA 90 bp | TACTTTTCTGTCTATTCTGAGGTACTATATGGACATTCTTTCCTATCAGTCTGTTTTTGCAAATTCAAATaGCAGGGTCTTCCAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YFSVYSEVLYGHSFLSVCFCKFK*QGLPVL Trigger: AAGAACTGGAAGACCCTGGCATTTGAATTTGCAAAA...ACAGACTGATAGGAAAGAATGTCCATATAGTACCTCAGAATAGACAGAAAAGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| CDS-3UTR CCA 90 bp | TACTTTTCTGTCTATTCTGAGGTACTATATGGACATTCTTTCCTATCAGTCTGTCATAATGGAACATTCTaGGAGCAAAAGAAAAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: YFSVYSEVLYGHSFLSVCHNGTF*EQKKNK Trigger: CTTGTTTTTCTTTTGCTCCCAGAATGTTCCATTATG...ACAGACTGATAGGAAAGAATGTCCATATAGTACCTCAGAATAGACAGAAAAGTA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| CDS CCA 90 bp | GCGAGTGGTGTTCCCCGCTGGCTGCCTGCAAGAGTTCAATGCCGCTaGTTCCCGCCTTCAGGCGCCGAGGCTTCCGGCTTCCTGCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ASGVPRWLPARVQCR*FPPSGAEASGFLQP Trigger: GGGCTGCAGGAAGCCGGAAGCCTCGGCGCCTGAAGGCGGGAACCAGCGGCATTGAACTCTTGCAGGCAGCCAGCGGGGAACACCACTCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031817.10 ENSMUST00000203840.2 |
||
| CDS GCA 90 bp | GTAGGAGCGAGTGGTGTTCCCCGCTGGCTGCCTGCAAGAGTTCAATaGCGCTGGTTCCCGCCTTCAGGCGCCGAGGCTTCCGGCTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VGASGVPRWLPARVQ*RWFPPSGAEASGFL Trigger: CAGGAAGCCGGAAGCCTCGGCGCCTGAAGGCGGGAACCAGCGGCATTGAACTCTTGCAGGCAGCCAGCGGGGAACACCACTCGCTCCTAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031817.10 ENSMUST00000203840.2 |
||
| CDS GCA 90 bp | TGGTTGCTGAACAGTAGGAGCGAGTGGTGTTCCCCGCTGGCTGCCTaGAAGAGTTCAATGCCGCTGGTTCCCGCCTTCAGGCGCCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: WLLNSRSEWCSPLAA*KSSMPLVPAFRRRG Trigger: GCCTCGGCGCCTGAAGGCGGGAACCAGCGGCATTGAACTCTTGCAGGCAGCCAGCGGGGAACACCACTCGCTCCTACTGTTCAGCAACCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031817.10 ENSMUST00000203840.2 |
||
| CDS CCA 90 bp | TCCCCGCAGGAATACACCCTGTGGTTGCTGAACAGTAGGAGCGAGTaGTGTTCCCCGCTGGCTGCCTGCAAGAGTTCAATGCCGCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SPQEYTLWLLNSRSE*CSPLAACKSSMPLV Trigger: AACCAGCGGCATTGAACTCTTGCAGGCAGCCAGCGGGGAACACCACTCGCTCCTACTGTTCAGCAACCACAGGGTGTATTCCTGCGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031817.10 ENSMUST00000203840.2 |
||
| CDS CCA 90 bp | GCTCACCAGGTCAACATGCAGATCATTCAGTGCCTGAATTGGTTCTaGCCTTTCGGTACTCTGGTCTCTCCTCTGGCCCAGCTGTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: AHQVNMQIIQCLNWF*PFGTLVSPLAQLSP Trigger: TGGGGACAGCTGGGCCAGAGGAGAGACCAGAGTACCGAAAGGCCAGAACCAATTCAGGCACTGAATGATCTGCATGTTGACCTGGTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| CDS-3UTR CAA 90 bp | CTTGGAGGCCAGAGGAGGGTGTTGGATCCCTTAGGACTGGAGTTAAAGACGAGAGATGAGTTGGGTTGCTaGTGTGACTTGGTCCACGGC | + |
|
Preference number: 5 (lower is better) Translates to: LGGQRRVLDPLGLELKTRDELGC*CDLVHG Trigger: GCCGTGGACCAAGTCACACAAGCAACCCAACTCATC...TCTCGTCTTTAACTCCAGTCCTAAGGGATCCAACACCCTCCTCTGGCCTCCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| CDS-3UTR CAA 90 bp | CTTGGAGGCCAGAGGAGGGTGTTGGATCCCTTAGGACTGGAGTTAAAGACGAGAGGGCCTCCTGATGAGTaGGGTTGCTTGTGTGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: LGGQRRVLDPLGLELKTRGPPDE*GCLCDL Trigger: CAAGTCACACAAGCAACCCAACTCATCAGGAGGCCC...TCTCGTCTTTAACTCCAGTCCTAAGGGATCCAACACCCTCCTCTGGCCTCCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| CDS-3UTR CAA 90 bp | CGAAGACCTTTCCTTTGTGGCAGACAGCCACAGAGTGTTCCTTCCCACAGCTCAGTTCTGCTCAGGAGCTaGGAAGTCACCTGGCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RRPFLCGRQPQSVPSHSSVLLRS*EVTWPF Trigger: GAAAGGCCAGGTGACTTCCAAGCTCCTGAGCAGAAC...TGAGCTGTGGGAAGGAACACTCTGTGGCTGTCTGCCACAAAGGAAAGGTCTTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203840.2 |
||
| CDS-3UTR CAA 90 bp | CTTGGAGGCCAGAGGAGGGTGTTGGATCCCTTAGGACTGGAGTTAAAGACGAGAGTGATACCCGACGAGTaGTCACAAAGTTGGCGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LGGQRRVLDPLGLELKTRVIPDE*SQSWRV Trigger: CACACGCCAACTTTGTGACAACTCGTCGGGTATCAC...TCTCGTCTTTAACTCCAGTCCTAAGGGATCCAACACCCTCCTCTGGCCTCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| CDS GCA 90 bp | GTGTTCCTTCCCACAGCTCACCAGGTCAACATGCAGATCATTCAGTaGCTGAATTGGTTCTGGCCTTTCGGTACTCTGGTCTCTCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VFLPTAHQVNMQIIQ*LNWFWPFGTLVSPL Trigger: CAGAGGAGAGACCAGAGTACCGAAAGGCCAGAACCAATTCAGGCACTGAATGATCTGCATGTTGACCTGGTGAGCTGTGGGAAGGAACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| CDS-3UTR CAA 90 bp | CATATCCATGGAATGTCTTGGAGGCCAGAGGAGGGTGTTGGATCCCTTAGGACTAACTGCCCAGATCTGTaGCTCCCCCAGCCAAATGAT | + |
|
Preference number: 5 (lower is better) Translates to: HIHGMSWRPEEGVGSLRTNCPDL*LPQPND Trigger: ATCATTTGGCTGGGGGAGCAACAGATCTGGGCAGTT...AGTCCTAAGGGATCCAACACCCTCCTCTGGCCTCCAAGACATTCCATGGATATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| CDS-3UTR CAA 90 bp | CTTGGAGGCCAGAGGAGGGTGTTGGATCCCTTAGGACTGGAGTTAAAGACGAGACGAGTTGTCACAAAGTaGGCGTGTGCTCCAGCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LGGQRRVLDPLGLELKTRRVVTK*ACAPAK Trigger: TTTTGCTGGAGCACACGCCAACTTTGTGACAACTCG...TCTCGTCTTTAACTCCAGTCCTAAGGGATCCAACACCCTCCTCTGGCCTCCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| CDS-3UTR CAA 90 bp | CTTGGAGGCCAGAGGAGGGTGTTGGATCCCTTAGGACTGGAGTTAAAGACGAGAGGCACTTTCTGGAAGTaGACAGTTAGCCTTATGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LGGQRRVLDPLGLELKTRGTFWK*TVSLMH Trigger: GTGCATAAGGCTAACTGTCAACTTCCAGAAAGTGCC...TCTCGTCTTTAACTCCAGTCCTAAGGGATCCAACACCCTCCTCTGGCCTCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| CDS-3UTR CAA 90 bp | CATATCCATGGAATGTCTTGGAGGCCAGAGGAGGGTGTTGGATCCCTTAGGACTCTGCTCTTCTCAAACTaGGGATTGACTGGAAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: HIHGMSWRPEEGVGSLRTLLFSN*GLTGNH Trigger: GTGGTTTCCAGTCAATCCCAAGTTTGAGAAGAGCAG...AGTCCTAAGGGATCCAACACCCTCCTCTGGCCTCCAAGACATTCCATGGATATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| CDS CCA 90 bp | CACGGCCTAAAGATACCACCTGACCAGTGGTGTAGACATATGCAATaGTGTGATAACTTGCGCACTCTATCTGTGAAACACGGCCACCAA | + |
|
Preference number: 5 (lower is better) Translates to: HGLKIPPDQWCRHMQ*CDNLRTLSVKHGHQ Trigger: TTGGTGGCCGTGTTTCACAGATAGAGTGCGCAAGTTATCACACCATTGCATATGTCTACACCACTGGTCAGGTGGTATCTTTAGGCCGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| CDS-3UTR CAA 90 bp | CATATCCATGGAATGTCTTGGAGGCCAGAGGAGGGTGTTGGATCCCTTAGGACTTTCTCAAACTTGGGATaGACTGGAAACCACATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HIHGMSWRPEEGVGSLRTFSNLG*TGNHML Trigger: CAGCATGTGGTTTCCAGTCAATCCCAAGTTTGAGAA...AGTCCTAAGGGATCCAACACCCTCCTCTGGCCTCCAAGACATTCCATGGATATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| CDS CCA 90 bp | TGCTTGTGTGACTTGGTCCACGGCCTAAAGATACCACCTGACCAGTaGTGTAGACATATGCAATGGTGTGATAACTTGCGCACTCTATCT | + |
|
Preference number: 5 (lower is better) Translates to: CLCDLVHGLKIPPDQ*CRHMQWCDNLRTLS Trigger: AGATAGAGTGCGCAAGTTATCACACCATTGCATATGTCTACACCACTGGTCAGGTGGTATCTTTAGGCCGTGGACCAAGTCACACAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| CDS-3UTR CAA 90 bp | GCCAGCCAGAGCTTTTATTTTCGTAGGCATAAAGCTTATTTCCTTAAATTCTCCAGCTGTCCCCAGCTGTaGTCCCCGCAGGAATACACC | + |
|
Preference number: 5 (lower is better) Translates to: ASQSFYFRRHKAYFLKFSSCPQL*SPQEYT Trigger: GGTGTATTCCTGCGGGGACAACAGCTGGGGACAGCT...GGAGAATTTAAGGAAATAAGCTTTATGCCTACGAAAATAAAAGCTCTGGCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000203840.2 |
||
| CDS-3UTR CAA 90 bp | GGTGTCTGTTCACGTAAGATATCTATGGTTTCCTCTCTCTGTGACATCTTTGTCGCGAAGACCTTTCCTTaGTGGCAGACAGCCACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GVCSRKISMVSSLCDIFVAKTFP*WQTATE Trigger: CTCTGTGGCTGTCTGCCACAAAGGAAAGGTCTTCGC...GACAAAGATGTCACAGAGAGAGGAAACCATAGATATCTTACGTGAACAGACACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| CDS-3UTR CAA 90 bp | CATATCCATGGAATGTCTTGGAGGCCAGAGGAGGGTGTTGGATCCCTTAGGACTTCTGTTGTTAACTTCTaGAAGACATCTCTTGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: HIHGMSWRPEEGVGSLRTSVVNF*KTSLAS Trigger: ACTGGCAAGAGATGTCTTCAAGAAGTTAACAACAGA...AGTCCTAAGGGATCCAACACCCTCCTCTGGCCTCCAAGACATTCCATGGATATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
||
| CDS-3UTR CAA 90 bp | CTTGGAGGCCAGAGGAGGGTGTTGGATCCCTTAGGACTGGAGTTAAAGACGAGAATGAACATTTCATATTaGGGGTCTGTCATCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LGGQRRVLDPLGLELKTRMNISY*GSVISS Trigger: TGAAGAGATGACAGACCCCAAATATGAAATGTTCAT...TCTCGTCTTTAACTCCAGTCCTAAGGGATCCAACACCCTCCTCTGGCCTCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS CCA 90 bp | TGTGTCTTCCACCAGGTGACTTCGTCTGACTTTCAGTATAAGGTATaGTGGGGAGCTCATCTTTTCTGGAAATGCCATGACTTCAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: CVFHQVTSSDFQYKV*WGAHLFWKCHDFRH Trigger: ATGTCTGAAGTCATGGCATTTCCAGAAAAGATGAGCTCCCCACCATACCTTATACTGAAAGTCAGACGAAGTCACCTGGTGGAAGACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS-3UTR CAA 90 bp | TACTTTTCTGTCTATTCTGAGGTACTATATGGACATTCTTTCCTATCAGTCTGTAGCTGTCCCCAGCTGTaGTCCCCGCAGGAATACACC | + |
|
Preference number: 5 (lower is better) Translates to: YFSVYSEVLYGHSFLSVCSCPQL*SPQEYT Trigger: GGTGTATTCCTGCGGGGACAACAGCTGGGGACAGCT...ACAGACTGATAGGAAAGAATGTCCATATAGTACCTCAGAATAGACAGAAAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS-3UTR CAA 90 bp | GGTGTCTGTTCACGTAAGATATCTATGGTTTCCTCTCTCTGTGACATCTTTGTCCTTCTGTGGAATAGCTaGAGAACGGGAATTCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GVCSRKISMVSSLCDIFVLLWNS*RTGILP Trigger: GGGAAGAATTCCCGTTCTCAAGCTATTCCACAGAAG...GACAAAGATGTCACAGAGAGAGGAAACCATAGATATCTTACGTGAACAGACACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS GCA 90 bp | TGTACAGTCCAGATCGTTATGCCGTATGAACATTCTTCCTGCCTCTaGATCAAAGTTAAAGATGCCAGAAAGCTCATTTATGATGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: CTVQIVMPYEHSSCL*IKVKDARKLIYDEG Trigger: GCCTTCATCATAAATGAGCTTTCTGGCATCTTTAACTTTGATGCAGAGGCAGGAAGAATGTTCATACGGCATAACGATCTGGACTGTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS TCA 90 bp | ACCACAGCTAATATAAATCACACTCAGATTCTTCAGGGCACCAATTaGATGCGGCTTGTAGATTTGTTCTTTAACTTTGTTCCCGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TTANINHTQILQGTN*MRLVDLFFNFVPAE Trigger: CTCAGCGGGAACAAAGTTAAAGAACAAATCTACAAGCCGCATTCAATTGGTGCCCTGAAGAATCTGAGTGTGATTTATATTAGCTGTGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS TCA 90 bp | ATATTTGGGGTCTGTCATCTCTTCAAATATACAGTGGAAGAACTCTaGACTCACTCCCCCAGCCTCAGGACGAATTTCATTAATAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: IFGVCHLFKYTVEEL*THSPSLRTNFINKS Trigger: GGATTTATTAATGAAATTCGTCCTGAGGCTGGGGGAGTGAGTTCAGAGTTCTTCCACTGTATATTTGAAGAGATGACAGACCCCAAATAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS TCA 90 bp | TTCATCCTTCGCATTGAGGAATACTTAGGTAGGTCTAGCATCCTGTaGCATGTCAATGATCTTGGGTTATCTTCTTCACTGAAGGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FILRIEEYLGRSSIL*HVNDLGLSSSLKVS Trigger: TGAAACCTTCAGTGAAGAAGATAACCCAAGATCATTGACATGTCACAGGATGCTAGACCTACCTAAGTATTCCTCAATGCGAAGGATGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS GCA 90 bp | CTGAAAACAACCATATCTGAGGATTCTGTACAGTCCAGATCGTTATaGCGTATGAACATTCTTCCTGCCTCTGCATCAAAGTTAAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: LKTTISEDSVQSRSL*RMNILPASASKLKM Trigger: CATCTTTAACTTTGATGCAGAGGCAGGAAGAATGTTCATACGGCATAACGATCTGGACTGTACAGAATCCTCAGATATGGTTGTTTTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS-3UTR CAA 90 bp | GGTGTCTGTTCACGTAAGATATCTATGGTTTCCTCTCTCTGTGACATCTTTGTCATGCGGCTTGTAGATTaGTTCTTTAACTTTGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GVCSRKISMVSSLCDIFVMRLVD*FFNFVP Trigger: GGGAACAAAGTTAAAGAACAAATCTACAAGCCGCAT...GACAAAGATGTCACAGAGAGAGGAAACCATAGATATCTTACGTGAACAGACACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS-3UTR CAA 90 bp | TACTTTTCTGTCTATTCTGAGGTACTATATGGACATTCTTTCCTATCAGTCTGTGTGTCCACAGGAAACTaGGATTATTTTTATGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: YFSVYSEVLYGHSFLSVCVSTGN*DYFYAS Trigger: GCTGGCATAAAAATAATCCAAGTTTCCTGTGGACAC...ACAGACTGATAGGAAAGAATGTCCATATAGTACCTCAGAATAGACAGAAAAGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS-3UTR CAA 90 bp | TACTTTTCTGTCTATTCTGAGGTACTATATGGACATTCTTTCCTATCAGTCTGTCCAGCAAAAATGTCTTaGACTTCAATATCCACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: YFSVYSEVLYGHSFLSVCPAKMS*TSISTR Trigger: CCTTGTGGATATTGAAGTCAAAGACATTTTTGCTGG...ACAGACTGATAGGAAAGAATGTCCATATAGTACCTCAGAATAGACAGAAAAGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS-3UTR CAA 90 bp | TACTTTTCTGTCTATTCTGAGGTACTATATGGACATTCTTTCCTATCAGTCTGTAGTGGGAAAGGAAGGTaGATAACCTTTAAGTTATGT | + |
|
Preference number: 5 (lower is better) Translates to: YFSVYSEVLYGHSFLSVCSGKGR*ITFKLC Trigger: ACATAACTTAAAGGTTATCAACCTTCCTTTCCCACT...ACAGACTGATAGGAAAGAATGTCCATATAGTACCTCAGAATAGACAGAAAAGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS GCA 72 bp | AGTGGTGTTCCCCGCTGGCTGCCTGCAAGAGTTCAATaGCGCTGGTTCCCGCCTTCAGGCGCCGAGGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SGVPRWLPARVQ*RWFPPSGAEAS Trigger: GGAAGCCTCGGCGCCTGAAGGCGGGAACCAGCGGCATTGAACTCTTGCAGGCAGCCAGCGGGGAACACCACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031817.10 ENSMUST00000203840.2 |
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| CDS GCA 72 bp | AACAGTAGGAGCGAGTGGTGTTCCCCGCTGGCTGCCTaGAAGAGTTCAATGCCGCTGGTTCCCGCCTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: NSRSEWCSPLAA*KSSMPLVPAFR Trigger: CCTGAAGGCGGGAACCAGCGGCATTGAACTCTTGCAGGCAGCCAGCGGGGAACACCACTCGCTCCTACTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031817.10 ENSMUST00000203840.2 |
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| CDS TCA 72 bp | AGCTGTTGTCCCCGCAGGAATACACCCTGTGGTTGCTaGACAGTAGGAGCGAGTGGTGTTCCCCGCTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SCCPRRNTPCGC*TVGASGVPRWL Trigger: CAGCCAGCGGGGAACACCACTCGCTCCTACTGTTCAGCAACCACAGGGTGTATTCCTGCGGGGACAACAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031817.10 ENSMUST00000203840.2 |
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| CDS CAA 72 bp | CGGGGGCCTCCTGATGAGTTGGGTTGCTTGTGTGACTaGGTCCACGGCCTAAAGATACCACCTGACCAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RGPPDELGCLCD*VHGLKIPPDQW Trigger: CCACTGGTCAGGTGGTATCTTTAGGCCGTGGACCAAGTCACACAAGCAACCCAACTCATCAGGAGGCCCCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS CCA 72 bp | GAATACACCCTGTGGTTGCTGAACAGTAGGAGCGAGTaGTGTTCCCCGCTGGCTGCCTGCAAGAGTTCAATG | + |
|
Preference number: 6 (lower is better) Translates to: EYTLWLLNSRSE*CSPLAACKSSM Trigger: CATTGAACTCTTGCAGGCAGCCAGCGGGGAACACCACTCGCTCCTACTGTTCAGCAACCACAGGGTGTATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031817.10 ENSMUST00000203840.2 |
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| CDS CAA 72 bp | AGTTCTCTGCGGGGGCCTCCTGATGAGTTGGGTTGCTaGTGTGACTTGGTCCACGGCCTAAAGATACCACCT | + |
|
Preference number: 6 (lower is better) Translates to: SSLRGPPDELGC*CDLVHGLKIPP Trigger: AGGTGGTATCTTTAGGCCGTGGACCAAGTCACACAAGCAACCCAACTCATCAGGAGGCCCCCGCAGAGAACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS CAA 90 bp | AGTTCTCTGCGGGGGCCTCCTGATGAGTTGGGTTGCTTGTGTGACTaGGTCCACGGCCTAAAGATACCACCTGACCAGTGGTGTAGACAT | + |
|
Preference number: 6 (lower is better) Translates to: SSLRGPPDELGCLCD*VHGLKIPPDQWCRH Trigger: ATGTCTACACCACTGGTCAGGTGGTATCTTTAGGCCGTGGACCAAGTCACACAAGCAACCCAACTCATCAGGAGGCCCCCGCAGAGAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS TCA 72 bp | ACTCTATCTGTGAAACACGGCCACCAATTCCTTCTATaGGTTGTGGGCCTCTTTGTCCACTCCTGGGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: TLSVKHGHQFLL*VVGLFVHSWGW Trigger: CCAGCCCCAGGAGTGGACAAAGAGGCCCACAACTCATAGAAGGAATTGGTGGCCGTGTTTCACAGATAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS CCA 72 bp | GTCAACATGCAGATCATTCAGTGCCTGAATTGGTTCTaGCCTTTCGGTACTCTGGTCTCTCCTCTGGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VNMQIIQCLNWF*PFGTLVSPLAQ Trigger: CTGGGCCAGAGGAGAGACCAGAGTACCGAAAGGCCAGAACCAATTCAGGCACTGAATGATCTGCATGTTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS CAA 90 bp | CCTCTTTGTCCACTCCTGGGGCTGGGCTGTAGTTGTCCAGAGCTATaGCCTCCAAATGTAAACACTTGTCCCTCCTCAGTAAGCACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: PLCPLLGLGCSCPEL*PPNVNTCPSSVSTA Trigger: TGCAGTGCTTACTGAGGAGGGACAAGTGTTTACATTTGGAGGCAATAGCTCTGGACAACTACAGCCCAGCCCCAGGAGTGGACAAAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS TCA 72 bp | CAGCTCACCAGGTCAACATGCAGATCATTCAGTGCCTaGATTGGTTCTGGCCTTTCGGTACTCTGGTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: QLTRSTCRSFSA*IGSGLSVLWSL Trigger: GAGAGACCAGAGTACCGAAAGGCCAGAACCAATTCAGGCACTGAATGATCTGCATGTTGACCTGGTGAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS CCA 72 bp | CACCAGGTCAACATGCAGATCATTCAGTGCCTGAATTaGTTCTGGCCTTTCGGTACTCTGGTCTCTCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: HQVNMQIIQCLN*FWPFGTLVSPL Trigger: CAGAGGAGAGACCAGAGTACCGAAAGGCCAGAACCAATTCAGGCACTGAATGATCTGCATGTTGACCTGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS CCA 72 bp | GACTTGGTCCACGGCCTAAAGATACCACCTGACCAGTaGTGTAGACATATGCAATGGTGTGATAACTTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: DLVHGLKIPPDQ*CRHMQWCDNLR Trigger: GCGCAAGTTATCACACCATTGCATATGTCTACACCACTGGTCAGGTGGTATCTTTAGGCCGTGGACCAAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS CAA 90 bp | CGACGAGTTGTCACAAAGTTGGCGTGTGCTCCAGCAAAAATGTCTTaGACTTCAATATCCACAAGGTCCTCTGCAGCTAGCAGGCAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: RRVVTKLACAPAKMS*TSISTRSSAASRQV Trigger: TACCTGCCTGCTAGCTGCAGAGGACCTTGTGGATATTGAAGTCAAAGACATTTTTGCTGGAGCACACGCCAACTTTGTGACAACTCGTCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS GCA 72 bp | ATTTGTTCTTTAACTTTGTTCCCGCTGAGAGCCAACTaGCCAGATCTGTTGCTCCCCCAGCCAAATGATGTC | + |
|
Preference number: 6 (lower is better) Translates to: ICSLTLFPLRAN*PDLLLPQPNDV Trigger: GACATCATTTGGCTGGGGGAGCAACAGATCTGGGCAGTTGGCTCTCAGCGGGAACAAAGTTAAAGAACAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS TCA 72 bp | CAGGATTTTCATGGAAACACCTGTAGACCTAGTATGTaGTACCCGACGAGTTGTCACAAAGTTGGCGTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: QDFHGNTCRPSM*YPTSCHKVGVC Trigger: GCACACGCCAACTTTGTGACAACTCGTCGGGTATCACATACTAGGTCTACAGGTGTTTCCATGAAAATCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS CCA 72 bp | CACCAGGTGACTTCGTCTGACTTTCAGTATAAGGTATaGTGGGGAGCTCATCTTTTCTGGAAATGCCATGAC | + |
|
Preference number: 6 (lower is better) Translates to: HQVTSSDFQYKV*WGAHLFWKCHD Trigger: GTCATGGCATTTCCAGAAAAGATGAGCTCCCCACCATACCTTATACTGAAAGTCAGACGAAGTCACCTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS CAA 72 bp | GACCAGTGGTGTAGACATATGCAATGGTGTGATAACTaGCGCACTCTATCTGTGAAACACGGCCACCAATTC | + |
|
Preference number: 6 (lower is better) Translates to: DQWCRHMQWCDN*RTLSVKHGHQF Trigger: GAATTGGTGGCCGTGTTTCACAGATAGAGTGCGCAAGTTATCACACCATTGCATATGTCTACACCACTGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS CAA 72 bp | GTCACAAAGTTGGCGTGTGCTCCAGCAAAAATGTCTTaGACTTCAATATCCACAAGGTCCTCTGCAGCTAGC | + |
|
Preference number: 6 (lower is better) Translates to: VTKLACAPAKMS*TSISTRSSAAS Trigger: GCTAGCTGCAGAGGACCTTGTGGATATTGAAGTCAAAGACATTTTTGCTGGAGCACACGCCAACTTTGTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS CAA 72 bp | GACCTAGTATGTGATACCCGACGAGTTGTCACAAAGTaGGCGTGTGCTCCAGCAAAAATGTCTTTGACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: DLVCDTRRVVTK*ACAPAKMSLTS Trigger: TGAAGTCAAAGACATTTTTGCTGGAGCACACGCCAACTTTGTGACAACTCGTCGGGTATCACATACTAGGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS CAA 90 bp | ACACCTGTAGACCTAGTATGTGATACCCGACGAGTTGTCACAAAGTaGGCGTGTGCTCCAGCAAAAATGTCTTTGACTTCAATATCCACA | + |
|
Preference number: 6 (lower is better) Translates to: TPVDLVCDTRRVVTK*ACAPAKMSLTSIST Trigger: TGTGGATATTGAAGTCAAAGACATTTTTGCTGGAGCACACGCCAACTTTGTGACAACTCGTCGGGTATCACATACTAGGTCTACAGGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS TCA 72 bp | GTCTGTCATCTCTTCAAATATACAGTGGAAGAACTCTaGACTCACTCCCCCAGCCTCAGGACGAATTTCATT | + |
|
Preference number: 6 (lower is better) Translates to: VCHLFKYTVEEL*THSPSLRTNFI Trigger: AATGAAATTCGTCCTGAGGCTGGGGGAGTGAGTTCAGAGTTCTTCCACTGTATATTTGAAGAGATGACAGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS GCA 72 bp | ACAGTCCAGATCGTTATGCCGTATGAACATTCTTCCTaGCTCTGCATCAAAGTTAAAGATGCCAGAAAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: TVQIVMPYEHSS*LCIKVKDARKL Trigger: GAGCTTTCTGGCATCTTTAACTTTGATGCAGAGGCAGGAAGAATGTTCATACGGCATAACGATCTGGACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS GCA 72 bp | ACCATATCTGAGGATTCTGTACAGTCCAGATCGTTATaGCGTATGAACATTCTTCCTGCCTCTGCATCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: TISEDSVQSRSL*RMNILPASASK Trigger: CTTTGATGCAGAGGCAGGAAGAATGTTCATACGGCATAACGATCTGGACTGTACAGAATCCTCAGATATGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS CCA 72 bp | AAGATACCACCTGACCAGTGGTGTAGACATATGCAATaGTGTGATAACTTGCGCACTCTATCTGTGAAACAC | + |
|
Preference number: 6 (lower is better) Translates to: KIPPDQWCRHMQ*CDNLRTLSVKH Trigger: GTGTTTCACAGATAGAGTGCGCAAGTTATCACACCATTGCATATGTCTACACCACTGGTCAGGTGGTATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS TCA 72 bp | CGCATTGAGGAATACTTAGGTAGGTCTAGCATCCTGTaGCATGTCAATGATCTTGGGTTATCTTCTTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: RIEEYLGRSSIL*HVNDLGLSSSL Trigger: CAGTGAAGAAGATAACCCAAGATCATTGACATGTCACAGGATGCTAGACCTACCTAAGTATTCCTCAATGCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS GCA 72 bp | CGGAATACTATTCCTTCATTCTGTAGGCCTTTCACATaGAGCCTATCACATCCTGTAAGAAACAAGAGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: RNTIPSFCRPFT*SLSHPVRNKRN Trigger: ATTCCTCTTGTTTCTTACAGGATGTGATAGGCTGCATGTGAAAGGCCTACAGAATGAAGGAATAGTATTCCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS TCA 72 bp | TTTCTTCAGAAAGCTCGCTGTCAAACAAGCAGAAGATaGAAATATCAAGCTGATTTCTCTTTTGGCGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FLQKARCQTSRR*KYQADFSFGAF Trigger: GAAGGCGCCAAAAGAGAAATCAGCTTGATATTTTCATCTTCTGCTTGTTTGACAGCGAGCTTTCTGAAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS GCA 72 bp | TCCAAATGTAAACACTTGTCCCTCCTCAGTAAGCACTaGAGTATGCTCATAACCACAGCTAATATAAATCAC | + |
|
Preference number: 6 (lower is better) Translates to: SKCKHLSLLSKH*SMLITTANINH Trigger: GTGATTTATATTAGCTGTGGTTATGAGCATACTGCAGTGCTTACTGAGGAGGGACAAGTGTTTACATTTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS GCA 72 bp | CAGATCGTTATGCCGTATGAACATTCTTCCTGCCTCTaGATCAAAGTTAAAGATGCCAGAAAGCTCATTTAT | + |
|
Preference number: 6 (lower is better) Translates to: QIVMPYEHSSCL*IKVKDARKLIY Trigger: ATAAATGAGCTTTCTGGCATCTTTAACTTTGATGCAGAGGCAGGAAGAATGTTCATACGGCATAACGATCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS TCA 72 bp | TGTGACATGTCAATGATCTTGGGTTATCTTCTTCACTaGAGGTTTCAGAACACCGGAATACTATTCCTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: CDMSMILGYLLH*RFQNTGILFLH Trigger: ATGAAGGAATAGTATTCCGGTGTTCTGAAACCTTCAGTGAAGAAGATAACCCAAGATCATTGACATGTCACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS CCA 72 bp | CTTTTATTTGCTGCTCTCCATTTCTTTACCAGAGACTaGTTGATTCGGATTATTTCTGGCAGGATTTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: LLFAALHFFTRD*LIRIISGRIFM Trigger: CATGAAAATCCTGCCAGAAATAATCCGAATCAACCAGTCTCTGGTAAAGAAATGGAGAGCAGCAAATAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS CCA 72 bp | GATGCCAGAAAGCTCATTTATGATGAAGGCACTTTCTaGAAGTTGACAGTTAGCCTTATGCACTTCTTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: DARKLIYDEGTF*KLTVSLMHFFY Trigger: ATAAAAGAAGTGCATAAGGCTAACTGTCAACTTCCAGAAAGTGCCTTCATCATAAATGAGCTTTCTGGCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS CAA 72 bp | TTATTTGCTGCTCTCCATTTCTTTACCAGAGACTGGTaGATTCGGATTATTTCTGGCAGGATTTTCATGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LFAALHFFTRDW*IRIISGRIFME Trigger: TTCCATGAAAATCCTGCCAGAAATAATCCGAATCAACCAGTCTCTGGTAAAGAAATGGAGAGCAGCAAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS CAA 90 bp | AACCACATGCTGGAACCCTTTTCAGGATATATGAACATTTCATATTaGGGGTCTGTCATCTCTTCAAATATACAGTGGAAGAACTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: NHMLEPFSGYMNISY*GSVISSNIQWKNSE Trigger: TTCAGAGTTCTTCCACTGTATATTTGAAGAGATGACAGACCCCAAATATGAAATGTTCATATATCCTGAAAAGGGTTCCAGCATGTGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS TCA 72 bp | GAAAGCTCATTTATGATGAAGGCACTTTCTGGAAGTTaGCAGTTAGCCTTATGCACTTCTTTTATCACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ESSFMMKALSGS*QLALCTSFITS Trigger: AGAAGTGATAAAAGAAGTGCATAAGGCTAACTGTCAACTTCCAGAAAGTGCCTTCATCATAAATGAGCTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS CAA 72 bp | AGAAAGCTCATTTATGATGAAGGCACTTTCTGGAAGTaGACAGTTAGCCTTATGCACTTCTTTTATCACTTC | + |
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Preference number: 6 (lower is better) Translates to: RKLIYDEGTFWK*TVSLMHFFYHF Trigger: GAAGTGATAAAAGAAGTGCATAAGGCTAACTGTCAACTTCCAGAAAGTGCCTTCATCATAAATGAGCTTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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| CDS GCA 72 bp | TCAGGACGAATTTCATTAATAAATCCAACCGATAGTTaGTTCCTAAGGTCAAAGTCTTCCACTTGTCTTAAT | + |
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Preference number: 6 (lower is better) Translates to: SGRISLINPTDS*FLRSKSSTCLN Trigger: ATTAAGACAAGTGGAAGACTTTGACCTTAGGAAGCAACTATCGGTTGGATTTATTAATGAAATTCGTCCTGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031817.10 |
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