Pregenerated sensors for HERC4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020064Ensembl transcript IDs: ENSMUST00000020258.10, ENSMUST00000218533.2, ENSMUST00000219577.2
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCACACGCAACAGCTACGATATTCTGGGCATCCAGGGCAACAACCTaGTCAACTTGTGCTGCCATTTCTCCGAAAACTTATCCCCTAAGA | + |
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Preference number: 1 (lower is better) Translates to: PHATATIFWASRATT*STCAAISPKTYPLR Trigger: TCTTAGGGGATAAGTTTTCGGAGAAATGGCAGCACAAGTTGAGCAGGTTGTTGCCCTGGATGCCCAGAATATCGTAGCTGTTGCGTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218533.2 |
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| 3UTR GCA 90 bp | AGCTACGATATTCTGGGCATCCAGGGCAACAACCTGCTCAACTTGTaGTGCCATTTCTCCGAAAACTTATCCCCTAAGATGAGGATAATT | + |
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Preference number: 1 (lower is better) Translates to: SYDILGIQGNNLLNL*CHFSENLSPKMRII Trigger: AATTATCCTCATCTTAGGGGATAAGTTTTCGGAGAAATGGCAGCACAAGTTGAGCAGGTTGTTGCCCTGGATGCCCAGAATATCGTAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218533.2 |
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| 3UTR GCA 90 bp | TACGATATTCTGGGCATCCAGGGCAACAACCTGCTCAACTTGTGCTaGCATTTCTCCGAAAACTTATCCCCTAAGATGAGGATAATTCTT | + |
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Preference number: 1 (lower is better) Translates to: YDILGIQGNNLLNLC*HFSENLSPKMRIIL Trigger: AAGAATTATCCTCATCTTAGGGGATAAGTTTTCGGAGAAATGGCAGCACAAGTTGAGCAGGTTGTTGCCCTGGATGCCCAGAATATCGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218533.2 |
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| 3UTR TCA 90 bp | GGTATTCCAAGCAAAGACTTAATCAGCTGTGGTGAAGTTTGCTTTTaGCAATCAATGCCTAGACCCAGCTGGCCATATTTATTCTGTCCC | + |
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Preference number: 1 (lower is better) Translates to: GIPSKDLISCGEVCF*QSMPRPSWPYLFCP Trigger: GGGACAGAATAAATATGGCCAGCTGGGTCTAGGCATTGATTGTCAAAAGCAAACTTCACCACAGCTGATTAAGTCTTTGCTTGGAATACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218533.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCTGTCCGTCAGAGTCGAGACCCCAAGCATACACCTGGCCCTTGTCATTCAGACAGCTACGATATTCTaGGCATCCAGGGCAACAACC | + |
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Preference number: 2 (lower is better) Translates to: KLSVRVETPSIHLALVIQTATIF*ASRATT Trigger: GGTTGTTGCCCTGGATGCCCAGAATATCGTAGCTGT...CTGAATGACAAGGGCCAGGTGTATGCTTGGGGTCTCGACTCTGACGGACAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218533.2 |
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| 3UTR CAA 90 bp | AACAGCTACGATATTCTGGGCATCCAGGGCAACAACCTGCTCAACTaGTGCTGCCATTTCTCCGAAAACTTATCCCCTAAGATGAGGATA | + |
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Preference number: 2 (lower is better) Translates to: NSYDILGIQGNNLLN*CCHFSENLSPKMRI Trigger: TATCCTCATCTTAGGGGATAAGTTTTCGGAGAAATGGCAGCACAAGTTGAGCAGGTTGTTGCCCTGGATGCCCAGAATATCGTAGCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218533.2 |
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| 3UTR-3UTR GCA 90 bp | AAGCTGTCCGTCAGAGTCGAGACCCCAAGCATACACCTGGCCCTTGTCATTCAGGATGAGGATAATTCTTaGAATTTGTGTCACAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: KLSVRVETPSIHLALVIQDEDNS*NLCHKH Trigger: ATGCTTGTGACACAAATTGCAAGAATTATCCTCATC...CTGAATGACAAGGGCCAGGTGTATGCTTGGGGTCTCGACTCTGACGGACAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218533.2 |
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| 3UTR-3UTR CCA 90 bp | CACGCAACCTGTACTATCTGGATATCCGAAAGACTTTTAATATTTCTGGGTACTCCCCAAGCATACACCTaGCCCTTGTCATTCAGCGCT | + |
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Preference number: 2 (lower is better) Translates to: HATCTIWISERLLIFLGTPQAYT*PLSFSA Trigger: AGCGCTGAATGACAAGGGCCAGGTGTATGCTTGGGG...AGTACCCAGAAATATTAAAAGTCTTTCGGATATCCAGATAGTACAGGTTGCGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218533.2 |
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| 3UTR GCA 72 bp | CTGGGCATCCAGGGCAACAACCTGCTCAACTTGTGCTaGCATTTCTCCGAAAACTTATCCCCTAAGATGAGG | + |
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Preference number: 3 (lower is better) Translates to: LGIQGNNLLNLC*HFSENLSPKMR Trigger: CCTCATCTTAGGGGATAAGTTTTCGGAGAAATGGCAGCACAAGTTGAGCAGGTTGTTGCCCTGGATGCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218533.2 |
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| 3UTR GCA 72 bp | ATTCTGGGCATCCAGGGCAACAACCTGCTCAACTTGTaGTGCCATTTCTCCGAAAACTTATCCCCTAAGATG | + |
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Preference number: 3 (lower is better) Translates to: ILGIQGNNLLNL*CHFSENLSPKM Trigger: CATCTTAGGGGATAAGTTTTCGGAGAAATGGCAGCACAAGTTGAGCAGGTTGTTGCCCTGGATGCCCAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218533.2 |
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| 3UTR GCA 72 bp | ACAGCTACGATATTCTGGGCATCCAGGGCAACAACCTaGTCAACTTGTGCTGCCATTTCTCCGAAAACTTAT | + |
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Preference number: 3 (lower is better) Translates to: TATIFWASRATT*STCAAISPKTY Trigger: ATAAGTTTTCGGAGAAATGGCAGCACAAGTTGAGCAGGTTGTTGCCCTGGATGCCCAGAATATCGTAGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218533.2 |
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| 3UTR-3UTR CAA 90 bp | CACGCAACCTGTACTATCTGGATATCCGAAAGACTTTTAATATTTCTGGGTACTGCATACACCTGGCCCTaGTCATTCAGCGCTAACGTG | + |
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Preference number: 3 (lower is better) Translates to: HATCTIWISERLLIFLGTAYTWP*SFSANV Trigger: CACGTTAGCGCTGAATGACAAGGGCCAGGTGTATGC...AGTACCCAGAAATATTAAAAGTCTTTCGGATATCCAGATAGTACAGGTTGCGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218533.2 |
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| 3UTR TCA 72 bp | AGCAAAGACTTAATCAGCTGTGGTGAAGTTTGCTTTTaGCAATCAATGCCTAGACCCAGCTGGCCATATTTA | + |
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Preference number: 3 (lower is better) Translates to: SKDLISCGEVCF*QSMPRPSWPYL Trigger: TAAATATGGCCAGCTGGGTCTAGGCATTGATTGTCAAAAGCAAACTTCACCACAGCTGATTAAGTCTTTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218533.2 |
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| CDS-3UTR GCA 90 bp | AGCTTCTCCACACGCAACAGCTACGATATTCTGGGCATCCAGGGCAACAACCTGAGGACAAACACAGTGTaGCTGAGTCCACAGCCTACA | + |
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Preference number: 4 (lower is better) Translates to: SFSTRNSYDILGIQGNNLRTNTV*LSPQPT Trigger: TGTAGGCTGTGGACTCAGGCACACTGTGTTTGTCCT...CAGGTTGTTGCCCTGGATGCCCAGAATATCGTAGCTGTTGCGTGTGGAGAAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218533.2 |
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| CDS-3UTR TCA 90 bp | CCAAGCTGTCCGTCAGAGTCGAGACCCCAAGCATACACCTGGCCCTTGTCATTCTTTCTGGACTTTTCATaGCCTAGCTGTCCTAGATCA | + |
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Preference number: 4 (lower is better) Translates to: PSCPSESRPQAYTWPLSFFLDFS*PSCPRS Trigger: TGATCTAGGACAGCTAGGTCATGAAAAGTCCAGAAA...GAATGACAAGGGCCAGGTGTATGCTTGGGGTCTCGACTCTGACGGACAGCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218533.2 |
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| 3UTR CAA 72 bp | GATATTCTGGGCATCCAGGGCAACAACCTGCTCAACTaGTGCTGCCATTTCTCCGAAAACTTATCCCCTAAG | + |
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Preference number: 4 (lower is better) Translates to: DILGIQGNNLLN*CCHFSENLSPK Trigger: CTTAGGGGATAAGTTTTCGGAGAAATGGCAGCACAAGTTGAGCAGGTTGTTGCCCTGGATGCCCAGAATATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218533.2 |
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| CDS-3UTR CCA 90 bp | AAGCTGTCCGTCAGAGTCGAGACCCCAAGCATACACCTGGCCCTTGTCATTCAGAAAAGTCACTTCTCCTaGGCTCTAGTACAATTTCTT | + |
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Preference number: 4 (lower is better) Translates to: KLSVRVETPSIHLALVIQKSHFS*ALVQFL Trigger: AAGAAATTGTACTAGAGCCCAGGAGAAGTGACTTTT...CTGAATGACAAGGGCCAGGTGTATGCTTGGGGTCTCGACTCTGACGGACAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218533.2 |
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| CDS-3UTR CCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTACCCCAAGCATACACCTaGCCCTTGTCATTCAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVPQAYT*PLSFSA Trigger: AGCGCTGAATGACAAGGGCCAGGTGTATGCTTGGGG...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR CCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTATTCTGCCTGTGGGCCTaGTCAATGGCCATCTGCATC | + |
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Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVFCLWA*SMAICI Trigger: GATGCAGATGGCCATTGACCAGGCCCACAGGCAGAA...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR CCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAGAGACATTCTGCCTGTaGGCCTGGTCAATGGCCATC | + |
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Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVETFCL*AWSMAI Trigger: GATGGCCATTGACCAGGCCCACAGGCAGAATGTCTC...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR TCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTATTCAGCGCTAACGTGTaGGCTTCTCCACACGCAACA | + |
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Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVFSANV*ASPHAT Trigger: TGTTGCGTGTGGAGAAGCTCACACGTTAGCGCTGAA...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR TCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTACCTCCACAGACCTTATaGAAGCCCGCATGGAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVPPQTL*KPAWKA Trigger: TGCTTTCCATGCGGGCTTTCATAAGGTCTGTGGAGG...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR GCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAACTATGGGCTCCTCCTaGTGCGACTTGCATGAATGG | + |
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Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVTMGSS*CDLHEW Trigger: CCATTCATGCAAGTCGCAGCAGGAGGAGCCCATAGT...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR CCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTATGTGGGCCTGGTCAATaGCCATCTGCATCTGCAAGA | + |
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Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVCGPGQ*PSASAR Trigger: TCTTGCAGATGCAGATGGCCATTGACCAGGCCCACA...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR TCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTACTTCCACAAGCGACCTaGGTAACAATGCTTCCCATG | + |
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Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVLPQAT*VTMLPM Trigger: CATGGGAAGCATTGTTACTCAGGTCGCTTGTGGAAG...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR TCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTATTCCAGAGGGGTAGCTaGGCCATTTCTGAATCAGAG | + |
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Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVFQRGS*AISESE Trigger: CTCTGATTCAGAAATGGCTCAGCTACCCCTCTGGAA...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR GCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAAGGACAAACACAGTGTaGCTGAGTCCACAGCCTACA | + |
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Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVRTNTV*LSPQPT Trigger: TGTAGGCTGTGGACTCAGGCACACTGTGTTTGTCCT...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR GCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTATCCAGGGCAACAACCTaGTCTGGTTTCTTTCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVSRATT*SGFFLD Trigger: GTCCAGAAAGAAACCAGAGCAGGTTGTTGCCCTGGA...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR GCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTACCTCCTGCTGCGACTTaGATGAATGGTATTCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVPPAAT*MNGIPS Trigger: GCTTGGAATACCATTCATGCAAGTCGCAGCAGGAGG...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR GCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAATGGGCTCCTCCTGCTaGGACTTGCATGAATGGTAT | + |
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Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVMGSSC*DLHEWY Trigger: ATACCATTCATGCAAGTCGCAGCAGGAGGAGCCCAT...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR GCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAGAACCAGTTCCCAACTaGCCATTACCACCAAGACCA | + |
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Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVEPVPN*PLPPRP Trigger: TGGTCTTGGTGGTAATGGGCAGTTGGGAACTGGTTC...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR GCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTATGTCACCGGGATATCTaGCAACACTCCATAGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVCHRDI*QHSIGL Trigger: CAAGCCTATGGAGTGTTGGCAGATATCCCGGTGACA...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020258.10 |
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| CDS-3UTR GCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTACTGCATCTGCAAGACTaGATCTGTCTGGAGCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVLHLQD*ICLEQS Trigger: ACTCTGCTCCAGACAGATGCAGTCTTGCAGATGCAG...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR GCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAATGGCCATCTGCATCTaGAAGACTGCATCTGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVMAICI*KTASVW Trigger: CCAGACAGATGCAGTCTTGCAGATGCAGATGGCCAT...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR GCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAATTAACAGCAGTGTCTaGCCCGTTCAGAACCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVINSSV*PVQNQL Trigger: GAGCTGGTTCTGAACGGGGCAGACACTGCTGTTAAT...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR CCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAACAGCTACGATATTCTaGGCATCCAGGGCAACAACC | + |
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Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVTATIF*ASRATT Trigger: GGTTGTTGCCCTGGATGCCCAGAATATCGTAGCTGT...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR CCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAGTGAGTACAAAACTATaGGCTCCTCCTGCTGCGACT | + |
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Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVVSTKL*APPAAT Trigger: AGTCGCAGCAGGAGGAGCCCATAGTTTTGTACTCAC...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR GCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTATTTGCGAACACCTCCTaGATCAACAGCATCTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVFANTS*INSIFS Trigger: GGAGAAGATGCTGTTGATGCAGGAGGTGTTCGCAAA...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR CCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAATGCCTAGACCCAGCTaGCCATATTTATTCTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVMPRPS*PYLFCP Trigger: GGGACAGAATAAATATGGCCAGCTGGGTCTAGGCAT...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR CCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTACATCAGGGGACACTCTaGCAGGGTAAGATAAAACCT | + |
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Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVHQGTL*QGKIKP Trigger: AGGTTTTATCTTACCCTGCCAGAGTGTCCCCTGATG...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR CCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTACACAGACTCGATCACTaGGAGAAAAAGAGAGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVHRLDH*EKKRGD Trigger: GTCTCCTCTCTTTTTCTCCCAGTGATCGAGTCTGTG...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR CCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTACCACCTCCTGTTGACTaGATGACTAGTTTCAGACTC | + |
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Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVPPPVD*MTSFRL Trigger: GAGTCTGAAACTAGTCATCCAGTCAACAGGAGGTGG...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR TCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAGGTGAAGTTTGCTTTTaGCAATCAATGCCTAGACCC | + |
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Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVGEVCF*QSMPRP Trigger: GGGTCTAGGCATTGATTGTCAAAAGCAAACTTCACC...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR TCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTATGGAGGTTCAAGTACTaGCCACCAGTTTTCAAGTAC | + |
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Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVWRFKY*PPVFKY Trigger: GTACTTGAAAACTGGTGGTCAGTACTTGAACCTCCA...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR TCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAGCTGCTGGACCCAGTTaGTATAGTCATTCCTTATGT | + |
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Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVAAGPS*YSHSLC Trigger: ACATAAGGAATGACTATATCAACTGGGTCCAGCAGC...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR TCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTATATTCTTGGTTTTCCTaGGGACTTCCATCGCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVYSWFS*GLPSHL Trigger: GAGATGCGATGGAAGTCCTCAGGAAAACCAAGAATA...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR TCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTACTCCTGTTGACTGGATaGCTAGTTTCAGACTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVLLLTG*LVSDSS Trigger: TGAAGAGTCTGAAACTAGTCATCCAGTCAACAGGAG...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR GCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAAAGGGCTTTTTCTGTTaGTGGTTGAACCAGTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVKGFFC*WLNQFP Trigger: TGGGAACTGGTTCAACCAGCAACAGAAAAAGCCCTT...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR GCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTACTTTTCCAAACTAGCTaGCACCTGCTGAGATATCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVLFQTS*HLLRYL Trigger: CAGATATCTCAGCAGGTGGCAGCTAGTTTGGAAAAG...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR GCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTATATCGTGGGATGGTCTaGCCAATACTCTCCTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVYRGMV*PILSFV Trigger: TACAAAGGAGAGTATTGGGCAGACCATCCCACGATA...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR CCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAGGCAACAACCTGCTCTaGTTTCTTTCTGGACTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVGNNLL*FLSGLF Trigger: GAAAAGTCCAGAAAGAAACCAGAGCAGGTTGTTGCC...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR CCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAGGCTTTTTCTGTTGCTaGTTGAACCAGTTCCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVGFFCC*LNQFPT Trigger: AGTTGGGAACTGGTTCAACCAGCAACAGAAAAAGCC...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR CCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTATTCCATCTATCTCATTaGCTATCTCCACAGGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVFHLSH*LSPQGT Trigger: GGTTCCCTGTGGAGATAGCCAATGAGATAGATGGAA...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR CCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAAAGACTGCATCTGTCTaGAGCAGAGTAGTTTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVKTASV*SRVVFA Trigger: GGCAAAAACTACTCTGCTCCAGACAGATGCAGTCTT...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
||
| CDS-3UTR CCA 90 bp | AGCTGGCCATATTTATTCTGTCCCCAACAGAAAACTTCACTTGCTTTAGAAAGTTCAGATGTGGGGTCCTaGTTTCTTTCTGGACTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SWPYLFCPQQKTSLALESSDVGS*FLSGLF Trigger: GAAAAGTCCAGAAAGAAACCAGGACCCCACATCTGA...ACTTTCTAAAGCAAGTGAAGTTTTCTGTTGGGGACAGAATAAATATGGCCAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000218533.2 |
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| CDS-3UTR TCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTATTTCTGGACTTTTCATaGCCTAGCTGTCCTAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVFLDFS*PSCPRS Trigger: TGATCTAGGACAGCTAGGTCATGAAAAGTCCAGAAA...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTATATTTCTGGGTACTCTaGTACATTCCTCTGATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVYFWVL*YIPLIP Trigger: AGGGATCAGAGGAATGTATCAGAGTACCCAGAAATA...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR TCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAAGGACTAGAGTAATGTaGAAAGCTTTGATCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVRTRVM*KALIST Trigger: GGTGGAGATCAAAGCTTTTCACATTACTCTAGTCCT...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR TCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAGTTCATATCAACCCCTaGAAATCTGGTACCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVVHINP*KSGTCS Trigger: AGAACAGGTACCAGATTTTCAGGGGTTGATATGAAC...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR TCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTACTGAAGCCTTCATTGTaGTCAATAGCTTGGATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVLKPSL*SIAWIS Trigger: ACTGATCCAAGCTATTGATCACAATGAAGGCTTCAG...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR CCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAACACTCCACCTTCCTTaGTTAATGCAGCAGTATGAT | + |
|
Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVTLHLP*LMQQYD Trigger: ATCATACTGCTGCATTAACCAAGGAAGGTGGAGTGT...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR CCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTACTCTATGTCATCTTCTaGATAGTCCAGCAATTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVLYVIF*IVQQLL Trigger: CAGCAATTGCTGGACTATCCAGAAGATGACATAGAG...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR CCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAATTTTTATCGTGGGATaGTCTGCCCAATACTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVIFIVG*SAQYSP Trigger: AGGAGAGTATTGGGCAGACCATCCCACGATAAAAAT...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR CCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTATCTTCATACCAAGAATaGGAATCCGATCACTACCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVSSYQE*ESDHYL Trigger: CAGGTAGTGATCGGATTCCCATTCTTGGTATGAAGA...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR TCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTACTTAATCAGCTGTGGTaGAGTTTGCTTTTGACAATC | + |
|
Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVLNQLW*SLLLTI Trigger: GATTGTCAAAAGCAAACTTCACCACAGCTGATTAAG...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR TCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAGCTTTGATCTCCACCTaGGAAAATTCTTTTGACACA | + |
|
Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVALIST*ENSFDT Trigger: TGTGTCAAAAGAATTTTCTCAGGTGGAGATCAAAGC...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR TCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAGGATTGCTATTGTTGTaGAATTGTTGCAGTCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVGLLLL*NCCSHS Trigger: TGAGTGACTGCAACAATTTCACAACAATAGCAATCC...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR GCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAGAGCAGAGTAGTTTTTaGCTGGGCATCAAATACAAA | + |
|
Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVEQSSF*LGIKYK Trigger: TTTGTATTTGATGCCCAGGCAAAAACTACTCTGCTC...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR CCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAGGTTGTATAAGTTTGTaGAATAAGAGTCTAGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVGCISL*NKSLAA Trigger: CGCTGCTAGACTCTTATTCCACAAACTTATACAACC...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR CCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAAAAGCCAAAGGGAAATaGAGGTCCACAATGGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVKAKGK*RSTMVK Trigger: TTTTACCATTGTGGACCTCCATTTCCCTTTGGCTTT...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR TCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAAAAGTTCTACTATCTTaGGGAATAGTGGAGGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVKVLLS*GIVEVQ Trigger: TTGAACCTCCACTATTCCTCAAGATAGTAGAACTTT...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR TCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTATTCAAATGTCTTATCTaGAAACCAAATGAGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVFKCLI*KPNEPG Trigger: TCCAGGCTCATTTGGTTTTCAGATAAGACATTTGAA...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR CCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAAAAAGTCACTTCTCCTaGGCTCTAGTACAATTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVKSHFS*ALVQFL Trigger: AAGAAATTGTACTAGAGCCCAGGAGAAGTGACTTTT...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR CCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAGCAACCTGTACTATCTaGATATCCGAAAGACTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVATCTI*ISERLL Trigger: TAAAAGTCTTTCGGATATCCAGATAGTACAGGTTGC...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR CCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAGTTCAAAAACTTTCCTaGGATTTATCTCATGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVVQKLS*DLSHDW Trigger: CCAGTCATGAGATAAATCCCAGGAAAGTTTTTGAAC...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR CCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAAGAGTAGTTTTTGCCTaGGCATCAAATACAAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVRVVFA*ASNTNG Trigger: TCCATTTGTATTTGATGCCCAGGCAAAAACTACTCT...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR CCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAATAACACCGATCAAGTaGAACAAATCACTGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVITPIK*NKSLSS Trigger: TGAAGACAGTGATTTGTTCCACTTGATCGGTGTTAT...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR GCA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTACTACAATATTCTCTCTaGGAACAACTAGAATTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSNSHCAEFTRETRVVFVLQYSL*EQLELS Trigger: GCTTAATTCTAGTTGTTCGCAGAGAGAATATTGTAG...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS GCA 90 bp | GGATTCACAGACTCGATCACTGGGAGAAAAAGAGAGGAGACATTCTaGCTGTGGGCCTGGTCAATGGCCATCTGCATCTGCAAGACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: GFTDSITGRKREETF*LWAWSMAICICKTA Trigger: TGCAGTCTTGCAGATGCAGATGGCCATTGACCAGGCCCACAGGCAGAATGTCTCCTCTCTTTTTCTCCCAGTGATCGAGTCTGTGAATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS CCA 90 bp | ATCTTCTGGATAGTCCAGCAATTGCTGCATGCTTCTCCCGACGGCTaGCATCAGCTCTTTCAGATCATCCAGGGACGGCTTCCTTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: IFWIVQQLLHASPDG*HQLFQIIQGRLPFQ Trigger: CTGAAAAGGAAGCCGTCCCTGGATGATCTGAAAGAGCTGATGCCAGCCGTCGGGAGAAGCATGCAGCAATTGCTGGACTATCCAGAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS TCA 90 bp | CTATCTCATTGGCTATCTCCACAGGGAACCTTCCAGAGGGGTAGCTaGGCCATTTCTGAATCAGAGCTTCGTTCACTGTCCAGATCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LSHWLSPQGTFQRGS*AISESELRSLSRSA Trigger: AGCAGATCTGGACAGTGAACGAAGCTCTGATTCAGAAATGGCTCAGCTACCCCTCTGGAAGGTTCCCTGTGGAGATAGCCAATGAGATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS GCA 90 bp | ATGTTTCCTCTATGTCATCTTCTGGATAGTCCAGCAATTGCTGCATaGTTCTCCCGACGGCTGGCATCAGCTCTTTCAGATCATCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: MFPLCHLLDSPAIAA*FSRRLASALSDHPG Trigger: CCCTGGATGATCTGAAAGAGCTGATGCCAGCCGTCGGGAGAAGCATGCAGCAATTGCTGGACTATCCAGAAGATGACATAGAGGAAACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
||
| CDS CCA 90 bp | CGTCCCCATCCAAAGATAGCTCCGGAAAGGGTGAGTACAAAACTATaGGCTCCTCCTGCTGCGACTTGCATGAATGGTATTCCAAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: RPHPKIAPERVSTKL*APPAATCMNGIPSK Trigger: TTTGCTTGGAATACCATTCATGCAAGTCGCAGCAGGAGGAGCCCATAGTTTTGTACTCACCCTTTCCGGAGCTATCTTTGGATGGGGACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
||
| CDS TCA 90 bp | CCGGGATATCTGCCAACACTCCATAGGCTTGCTGCTGGACCCAGTTaGTATAGTCATTCCTTATGTCTATCAGCTCTTGGACTTCATGGA | + |
|
Preference number: 5 (lower is better) Translates to: PGYLPTLHRLAAGPS*YSHSLCLSALGLHG Trigger: TCCATGAAGTCCAAGAGCTGATAGACATAAGGAATGACTATATCAACTGGGTCCAGCAGCAAGCCTATGGAGTGTTGGCAGATATCCCGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020258.10 |
||
| CDS TCA 90 bp | TATGGGAAACCGGGAGATAGCTCTCACCACCTCCTGTTGACTGGATaGCTAGTTTCAGACTCTTCATACCAAGAATGGGAATCCGATCAC | + |
|
Preference number: 5 (lower is better) Translates to: YGKPGDSSHHLLLTG*LVSDSSYQEWESDH Trigger: GTGATCGGATTCCCATTCTTGGTATGAAGAGTCTGAAACTAGTCATCCAGTCAACAGGAGGTGGTGAGAGCTATCTCCCGGTTTCCCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
||
| CDS GCA 90 bp | CCGGAAAGGGTGAGTACAAAACTATGGGCTCCTCCTGCTGCGACTTaGATGAATGGTATTCCAAGCAAAGACTTAATCAGCTGTGGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: PERVSTKLWAPPAAT*MNGIPSKDLISCGE Trigger: TTCACCACAGCTGATTAAGTCTTTGCTTGGAATACCATTCATGCAAGTCGCAGCAGGAGGAGCCCATAGTTTTGTACTCACCCTTTCCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
||
| CDS GCA 90 bp | GATAGCTCCGGAAAGGGTGAGTACAAAACTATGGGCTCCTCCTGCTaGGACTTGCATGAATGGTATTCCAAGCAAAGACTTAATCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: DSSGKGEYKTMGSSC*DLHEWYSKQRLNQL Trigger: CAGCTGATTAAGTCTTTGCTTGGAATACCATTCATGCAAGTCGCAGCAGGAGGAGCCCATAGTTTTGTACTCACCCTTTCCGGAGCTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS GCA 90 bp | GGCATCAACAAACTCCTGCCGATTCTGTCTATTAACAGCAGTGTCTaGCCCGTTCAGAACCAGCTCTTTTACTTCTGTTGCACCGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: GINKLLPILSINSSV*PVQNQLFYFCCTEV Trigger: AACTTCGGTGCAACAGAAGTAAAAGAGCTGGTTCTGAACGGGGCAGACACTGCTGTTAATAGACAGAATCGGCAGGAGTTTGTTGATGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS CCA 90 bp | TGGGCCTGGTCAATGGCCATCTGCATCTGCAAGACTGCATCTGTCTaGAGCAGAGTAGTTTTTGCCTGGGCATCAAATACAAATGGATAT | + |
|
Preference number: 5 (lower is better) Translates to: WAWSMAICICKTASV*SRVVFAWASNTNGY Trigger: ATATCCATTTGTATTTGATGCCCAGGCAAAAACTACTCTGCTCCAGACAGATGCAGTCTTGCAGATGCAGATGGCCATTGACCAGGCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS GCA 90 bp | AAAGATAGCTCCGGAAAGGGTGAGTACAAAACTATGGGCTCCTCCTaGTGCGACTTGCATGAATGGTATTCCAAGCAAAGACTTAATCAG | + |
|
Preference number: 5 (lower is better) Translates to: KDSSGKGEYKTMGSS*CDLHEWYSKQRLNQ Trigger: CTGATTAAGTCTTTGCTTGGAATACCATTCATGCAAGTCGCAGCAGGAGGAGCCCATAGTTTTGTACTCACCCTTTCCGGAGCTATCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR CAA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAGCATACACCTGGCCCTaGTCATTCAGCGCTAACGTG | + |
|
Preference number: 5 (lower is better) Translates to: RSNSHCAEFTRETRVVFVAYTWP*SFSANV Trigger: CACGTTAGCGCTGAATGACAAGGGCCAGGTGTATGC...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS TCA 90 bp | AAACCAGTTTCCTTTTACAGTGAAAGGGCTTTTTCTGTTGCTGGTTaGACCAGTTCCCAACTGCCCATTACCACCAAGACCAAAGGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: KPVSFYSERAFSVAG*TSSQLPITTKTKGV Trigger: TACTCCTTTGGTCTTGGTGGTAATGGGCAGTTGGGAACTGGTTCAACCAGCAACAGAAAAAGCCCTTTCACTGTAAAAGGAAACTGGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR CAA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTACAACACTCCATAGGCTaGCTGCTGGACCCAGTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: RSNSHCAEFTRETRVVFVQHSIG*LLDPVD Trigger: ATCAACTGGGTCCAGCAGCAAGCCTATGGAGTGTTG...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020258.10 |
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| CDS-3UTR CAA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTATGGATAGTCCAGCAATaGCTGCATGCTTCTCCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: RSNSHCAEFTRETRVVFVWIVQQ*LHASPD Trigger: GTCGGGAGAAGCATGCAGCAATTGCTGGACTATCCA...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR CAA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAATCCACTCCATAGGCTaGCTGCTGGACCCAGTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: RSNSHCAEFTRETRVVFVIHSIG*LLDPVD Trigger: ATCAACTGGGTCCAGCAGCAAGCCTATGGAGTGGAT...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219577.2 |
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| CDS-3UTR CAA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTATCCTCCTGCTGCGACTaGCATGAATGGTATTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: RSNSHCAEFTRETRVVFVSSCCD*HEWYSK Trigger: CTTGGAATACCATTCATGCAAGTCGCAGCAGGAGGA...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS CCA 90 bp | AGCCTACATCTCGGACCTTTTTGTTCACGAAAAAGTCACTTCTCCTaGGCTCTAGTACAATTTCTTCATCAATTCCTCCCAAACCTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: SLHLGPFCSRKSHFS*ALVQFLHQFLPNLV Trigger: AACTAGGTTTGGGAGGAATTGATGAAGAAATTGTACTAGAGCCCAGGAGAAGTGACTTTTTCGTGAACAAAAAGGTCCGAGATGTAGGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000020258.10 ENSMUST00000218533.2 ENSMUST00000219577.2 |
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| CDS-3UTR CAA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTATTTTTCTGTTGCTGGTaGAACCAGTTCCCAACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RSNSHCAEFTRETRVVFVFFCCW*NQFPTA Trigger: GGCAGTTGGGAACTGGTTCAACCAGCAACAGAAAAA...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS TCA 90 bp | GAAAGCCCGCATGGAAAGCATCAAATAAAGATGCCACTGATTTATTaGATATGTAATCCACATAGGCATCAACAAACTCCTGCCGATTCT | + |
|
Preference number: 5 (lower is better) Translates to: ESPHGKHQIKMPLIY*ICNPHRHQQTPADS Trigger: AGAATCGGCAGGAGTTTGTTGATGCCTATGTGGATTACATATTCAATAAATCAGTGGCATCTTTATTTGATGCTTTCCATGCGGGCTTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR CAA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAATTGTTGTGAAATTGTaGCAGTCACTCATCAGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RSNSHCAEFTRETRVVFVIVVKL*QSLIRG Trigger: TCCCCTGATGAGTGACTGCAACAATTTCACAACAAT...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR CAA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAATGGATATGTACAAATaGTCACCGGGATATCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RSNSHCAEFTRETRVVFVMDMYK*SPGYLP Trigger: TGGCAGATATCCCGGTGACAATTTGTACATATCCAT...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR CAA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAAGCAAGAAAAATTCTTaGCGAACACCTCCTGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: RSNSHCAEFTRETRVVFVSKKNS*RTPPAS Trigger: TGATGCAGGAGGTGTTCGCAAAGAATTTTTCTTGCT...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS TCA 90 bp | AGTAAATTAGGAACATACCTATCATTTTCATCATTAAGACCTAGCTaGCCAAATTTGTTACGTCCCCATCCAAAGATAGCTCCGGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SKLGTYLSFSSLRPS*PNLLRPHPKIAPER Trigger: CCTTTCCGGAGCTATCTTTGGATGGGGACGTAACAAATTTGGTCAGCTAGGTCTTAATGATGAAAATGATAGGTATGTTCCTAATTTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR CAA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAATTGTGATCAATAGCTaGGATCAGTTTACATCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RSNSHCAEFTRETRVVFVIVINS*DQFTSE Trigger: CTCCGATGTAAACTGATCCAAGCTATTGATCACAAT...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR CAA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTATTCAGAACCAATATCTaGTGGACACTGTCCATTATA | + |
|
Preference number: 5 (lower is better) Translates to: RSNSHCAEFTRETRVVFVFRTNI*WTLSII Trigger: TATAATGGACAGTGTCCACAAGATATTGGTTCTGAA...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR CAA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTATCAGGTTGTATAAGTTaGTGGAATAAGAGTCTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RSNSHCAEFTRETRVVFVSGCIS*WNKSLA Trigger: TGCTAGACTCTTATTCCACAAACTTATACAACCTGA...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR CAA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTAAAAAGTTCTACTATCTaGAGGAATAGTGGAGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RSNSHCAEFTRETRVVFVKSSTI*RNSGGS Trigger: TGAACCTCCACTATTCCTCAAGATAGTAGAACTTTT...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS-3UTR CAA 90 bp | AGAAGTAACTCTCACTGTGCTGAATTCACAAGAGAAACACGAGTGGTTTTTGTATATGTCTATCAGCTCTaGGACTTCATGGATGTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: RSNSHCAEFTRETRVVFVYVYQL*DFMDVK Trigger: TTTTACATCCATGAAGTCCAAGAGCTGATAGACATA...TACAAAAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS TCA 72 bp | TGGCTATCTCCACAGGGAACCTTCCAGAGGGGTAGCTaGGCCATTTCTGAATCAGAGCTTCGTTCACTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: WLSPQGTFQRGS*AISESELRSLS Trigger: GGACAGTGAACGAAGCTCTGATTCAGAAATGGCTCAGCTACCCCTCTGGAAGGTTCCCTGTGGAGATAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS GCA 72 bp | CTATGTCATCTTCTGGATAGTCCAGCAATTGCTGCATaGTTCTCCCGACGGCTGGCATCAGCTCTTTCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: LCHLLDSPAIAA*FSRRLASALSD Trigger: ATCTGAAAGAGCTGATGCCAGCCGTCGGGAGAAGCATGCAGCAATTGCTGGACTATCCAGAAGATGACATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS TCA 72 bp | CCGGGAGATAGCTCTCACCACCTCCTGTTGACTGGATaGCTAGTTTCAGACTCTTCATACCAAGAATGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: PGDSSHHLLLTG*LVSDSSYQEWE Trigger: TTCCCATTCTTGGTATGAAGAGTCTGAAACTAGTCATCCAGTCAACAGGAGGTGGTGAGAGCTATCTCCCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS GCA 72 bp | TCCGGAAAGGGTGAGTACAAAACTATGGGCTCCTCCTaGTGCGACTTGCATGAATGGTATTCCAAGCAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: SGKGEYKTMGSS*CDLHEWYSKQR Trigger: TCTTTGCTTGGAATACCATTCATGCAAGTCGCAGCAGGAGGAGCCCATAGTTTTGTACTCACCCTTTCCGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS CCA 72 bp | CCAAAGATAGCTCCGGAAAGGGTGAGTACAAAACTATaGGCTCCTCCTGCTGCGACTTGCATGAATGGTATT | + |
|
Preference number: 6 (lower is better) Translates to: PKIAPERVSTKL*APPAATCMNGI Trigger: AATACCATTCATGCAAGTCGCAGCAGGAGGAGCCCATAGTTTTGTACTCACCCTTTCCGGAGCTATCTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS CAA 90 bp | ATCTGCCAACTCAGTTACTCCATGGCTGACATCCACTCCATAGGCTaGCTGCTGGACCCAGTTGATATAGTCATTCCTTATGTCTATCAG | + |
|
Preference number: 6 (lower is better) Translates to: ICQLSYSMADIHSIG*LLDPVDIVIPYVYQ Trigger: CTGATAGACATAAGGAATGACTATATCAACTGGGTCCAGCAGCAAGCCTATGGAGTGGATGTCAGCCATGGAGTAACTGAGTTGGCAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219577.2 |
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| CDS TCA 72 bp | CTGCCAACACTCCATAGGCTTGCTGCTGGACCCAGTTaGTATAGTCATTCCTTATGTCTATCAGCTCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LPTLHRLAAGPS*YSHSLCLSALG Trigger: TCCAAGAGCTGATAGACATAAGGAATGACTATATCAACTGGGTCCAGCAGCAAGCCTATGGAGTGTTGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020258.10 |
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| CDS GCA 72 bp | GGAAAGGGTGAGTACAAAACTATGGGCTCCTCCTGCTaGGACTTGCATGAATGGTATTCCAAGCAAAGACTT | + |
|
Preference number: 6 (lower is better) Translates to: GKGEYKTMGSSC*DLHEWYSKQRL Trigger: AAGTCTTTGCTTGGAATACCATTCATGCAAGTCGCAGCAGGAGGAGCCCATAGTTTTGTACTCACCCTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS GCA 72 bp | AAACTCCTGCCGATTCTGTCTATTAACAGCAGTGTCTaGCCCGTTCAGAACCAGCTCTTTTACTTCTGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: KLLPILSINSSV*PVQNQLFYFCC Trigger: GCAACAGAAGTAAAAGAGCTGGTTCTGAACGGGGCAGACACTGCTGTTAATAGACAGAATCGGCAGGAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS CAA 72 bp | CTCAGTTACTCCATGGCTGACATCCACTCCATAGGCTaGCTGCTGGACCCAGTTGATATAGTCATTCCTTAT | + |
|
Preference number: 6 (lower is better) Translates to: LSYSMADIHSIG*LLDPVDIVIPY Trigger: ATAAGGAATGACTATATCAACTGGGTCCAGCAGCAAGCCTATGGAGTGGATGTCAGCCATGGAGTAACTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219577.2 |
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| CDS TCA 72 bp | TCACAAGAGCTGTACCAAAGGGGATTGCTATTGTTGTaGAATTGTTGCAGTCACTCATCAGGGGACACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SQELYQRGLLLL*NCCSHSSGDTL Trigger: CAGAGTGTCCCCTGATGAGTGACTGCAACAATTTCACAACAATAGCAATCCCCTTTGGTACAGCTCTTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS GCA 72 bp | GTGAGTACAAAACTATGGGCTCCTCCTGCTGCGACTTaGATGAATGGTATTCCAAGCAAAGACTTAATCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VSTKLWAPPAAT*MNGIPSKDLIS Trigger: GCTGATTAAGTCTTTGCTTGGAATACCATTCATGCAAGTCGCAGCAGGAGGAGCCCATAGTTTTGTACTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS CCA 72 bp | TGTGAAATTGTTGCAGTCACTCATCAGGGGACACTCTaGCAGGGTAAGATAAAACCTCAGAGCTTCAACATC | + |
|
Preference number: 6 (lower is better) Translates to: CEIVAVTHQGTL*QGKIKPQSFNI Trigger: GATGTTGAAGCTCTGAGGTTTTATCTTACCCTGCCAGAGTGTCCCCTGATGAGTGACTGCAACAATTTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS CAA 72 bp | GGTGAGTACAAAACTATGGGCTCCTCCTGCTGCGACTaGCATGAATGGTATTCCAAGCAAAGACTTAATCAG | + |
|
Preference number: 6 (lower is better) Translates to: GEYKTMGSSCCD*HEWYSKQRLNQ Trigger: CTGATTAAGTCTTTGCTTGGAATACCATTCATGCAAGTCGCAGCAGGAGGAGCCCATAGTTTTGTACTCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS CAA 72 bp | AATTGTCACCGGGATATCTGCCAACACTCCATAGGCTaGCTGCTGGACCCAGTTGATATAGTCATTCCTTAT | + |
|
Preference number: 6 (lower is better) Translates to: NCHRDICQHSIG*LLDPVDIVIPY Trigger: ATAAGGAATGACTATATCAACTGGGTCCAGCAGCAAGCCTATGGAGTGTTGGCAGATATCCCGGTGACAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020258.10 |
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| CDS TCA 72 bp | ACAAATGCAGAGGTATGCTGCCTTCCACAAGCGACCTaGGTAACAATGCTTCCCATGAGTTCAAAAACTTTC | + |
|
Preference number: 6 (lower is better) Translates to: TNAEVCCLPQAT*VTMLPMSSKTF Trigger: GAAAGTTTTTGAACTCATGGGAAGCATTGTTACTCAGGTCGCTTGTGGAAGGCAGCATACCTCTGCATTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS TCA 72 bp | TGGAAGAGCAGAAGAACTTTTCCTCCACAGACCTTATaGAAGCCCGCATGGAAAGCATCAAATAAAGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: WKSRRTFPPQTL*KPAWKASNKDA Trigger: GGCATCTTTATTTGATGCTTTCCATGCGGGCTTTCATAAGGTCTGTGGAGGAAAAGTTCTTCTGCTCTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS GCA 72 bp | TACAAATGGATATGTACAAATTGTCACCGGGATATCTaGCAACTCAGTTACTCCATGGCTGACATCCACTCC | + |
|
Preference number: 6 (lower is better) Translates to: YKWICTNCHRDI*QLSYSMADIHS Trigger: GGAGTGGATGTCAGCCATGGAGTAACTGAGTTGGCAGATATCCCGGTGACAATTTGTACATATCCATTTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219577.2 |
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| CDS CAA 72 bp | AACCAGTTTCCTTTTACAGTGAAAGGGCTTTTTCTGTaGCTGGTTGAACCAGTTCCCAACTGCCCATTACCA | + |
|
Preference number: 6 (lower is better) Translates to: NQFPFTVKGLFL*LVEPVPNCPLP Trigger: TGGTAATGGGCAGTTGGGAACTGGTTCAACCAGCAACAGAAAAAGCCCTTTCACTGTAAAAGGAAACTGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS CCA 72 bp | CTCGGACCTTTTTGTTCACGAAAAAGTCACTTCTCCTaGGCTCTAGTACAATTTCTTCATCAATTCCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LGPFCSRKSHFS*ALVQFLHQFLP Trigger: TGGGAGGAATTGATGAAGAAATTGTACTAGAGCCCAGGAGAAGTGACTTTTTCGTGAACAAAAAGGTCCGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000020258.10 ENSMUST00000218533.2 ENSMUST00000219577.2 |
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| CDS CAA 72 bp | AGATGTACCACAACTTCCTTAAAAAGTTCTACTATCTaGAGGAATAGTGGAGGTTCAAGTACTGACCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: RCTTTSLKSSTI*RNSGGSSTDHQ Trigger: CTGGTGGTCAGTACTTGAACCTCCACTATTCCTCAAGATAGTAGAACTTTTTAAGGAAGTTGTGGTACATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS CAA 90 bp | CTGCTGGACCCAGTTGATATAGTCATTCCTTATGTCTATCAGCTCTaGGACTTCATGGATGTAAAACTTGTCATATTGAATAAGTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LLDPVDIVIPYVYQL*DFMDVKLVILNKLS Trigger: GGACAACTTATTCAATATGACAAGTTTTACATCCATGAAGTCCAAGAGCTGATAGACATAAGGAATGACTATATCAACTGGGTCCAGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS CAA 90 bp | TATTTAGGATCCAACAATTCCCTCATGATAAGCAAGAAAAATTCTTaGCGAACACCTCCTGCATCAACAGCATCTTCTCCAACAAATATA | + |
|
Preference number: 6 (lower is better) Translates to: YLGSNNSLMISKKNS*RTPPASTASSPTNI Trigger: TATATTTGTTGGAGAAGATGCTGTTGATGCAGGAGGTGTTCGCAAAGAATTTTTCTTGCTTATCATGAGGGAATTGTTGGATCCTAAATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS CAA 72 bp | TCTTTTGACACAGAAATAGTCTTCAGAACCAATATCTaGTGGACACTGTCCATTATAAGAAAACCAGTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SFDTEIVFRTNI*WTLSIIRKPVS Trigger: GGAAACTGGTTTTCTTATAATGGACAGTGTCCACAAGATATTGGTTCTGAAGACTATTTCTGTGTCAAAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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| CDS CAA 72 bp | CCAGTTGATATAGTCATTCCTTATGTCTATCAGCTCTaGGACTTCATGGATGTAAAACTTGTCATATTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: PVDIVIPYVYQL*DFMDVKLVILN Trigger: ATTCAATATGACAAGTTTTACATCCATGAAGTCCAAGAGCTGATAGACATAAGGAATGACTATATCAACTGG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020258.10 ENSMUST00000219577.2 |
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