Pregenerated sensors for HEPACAM2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044156Ensembl transcript IDs: ENSMUST00000049985.15, ENSMUST00000200854.2, ENSMUST00000201607.4
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCTTCAGTCTGCACAGGCGCCTCTACTCTGCATCAAGATGTAACTaGAGGTTGCTAGGATTGTATTTTTCACAGATTCCAGATGTTTCC | + |
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Preference number: 1 (lower is better) Translates to: AFSLHRRLYSASRCN*RLLGLYFSQIPDVS Trigger: GGAAACATCTGGAATCTGTGAAAAATACAATCCTAGCAACCTTCAGTTACATCTTGATGCAGAGTAGAGGCGCCTGTGCAGACTGAAGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| 3UTR-3UTR CAA 90 bp | ACACTGTTGATACCAAAGTTCACTGAGAGCCAGGGAAAAGGCACAGTCTTACCTCCCCAGTTGGAACGCTaGGAAGTTTCAGTAGCAAGT | + |
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Preference number: 3 (lower is better) Translates to: TLLIPKFTESQGKGTVLPPQLER*EVSVAS Trigger: ACTTGCTACTGAAACTTCCAAGCGTTCCAACTGGGG...AGGTAAGACTGTGCCTTTTCCCTGGCTCTCAGTGAACTTTGGTATCAACAGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| 3UTR TCA 72 bp | TGTCTTTCCAAATACACTGTTGATACCAAAGTTCACTaGGAGCCAGGGAAAAGGCACAGTCTTACCTCTGTG | + |
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Preference number: 3 (lower is better) Translates to: CLSKYTVDTKVH*EPGKRHSLTSV Trigger: CACAGAGGTAAGACTGTGCCTTTTCCCTGGCTCTCAGTGAACTTTGGTATCAACAGTGTATTTGGAAAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR TCA 90 bp | ACACAGCCCATTGCGCACGTCAGAAAACCAGCCTTCAGTCTGCACAGGCGCCTCGCCGTGGACAGTGTATaGCGGCACGGTCACCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: TQPIAHVRKPAFSLHRRLAVDSV*RHGHLQ Trigger: CTGAAGGTGACCGTGCCGTCATACACTGTCCACGGC...GAGGCGCCTGTGCAGACTGAAGGCTGGTTTTCTGACGTGCGCAATGGGCTGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR CCA 90 bp | ACACAGCCCATTGCGCACGTCAGAAAACCAGCCTTCAGTCTGCACAGGCGCCTCGAAGCCATAGTGCACTaGAAGGTAGAGGGCCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: TQPIAHVRKPAFSLHRRLEAIVH*KVEGLS Trigger: GGACAGGCCCTCTACCTTCCAGTGCACTATGGCTTC...GAGGCGCCTGTGCAGACTGAAGGCTGGTTTTCTGACGTGCGCAATGGGCTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR TCA 90 bp | ACACAGCCCATTGCGCACGTCAGAAAACCAGCCTTCAGTCTGCACAGGCGCCTCAAGAGTGGCTGGAGTTaGTGGAAATGGGTTTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: TQPIAHVRKPAFSLHRRLKSGWS*WKWVSH Trigger: GTGGGAAACCCATTTCCATCAACTCCAGCCACTCTT...GAGGCGCCTGTGCAGACTGAAGGCTGGTTTTCTGACGTGCGCAATGGGCTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR CCA 90 bp | ACACAGCCCATTGCGCACGTCAGAAAACCAGCCTTCAGTCTGCACAGGCGCCTCCTGGATGTCAGATGCTaGAGTGTGGAAGCCATAGTG | + |
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Preference number: 4 (lower is better) Translates to: TQPIAHVRKPAFSLHRRLLDVRC*SVEAIV Trigger: CACTATGGCTTCCACACTCCAGCATCTGACATCCAG...GAGGCGCCTGTGCAGACTGAAGGCTGGTTTTCTGACGTGCGCAATGGGCTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR TCA 90 bp | ACACAGCCCATTGCGCACGTCAGAAAACCAGCCTTCAGTCTGCACAGGCGCCTCCATTCCCCTGGATGTTaGCCTTCACGATGTAATTGC | + |
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Preference number: 4 (lower is better) Translates to: TQPIAHVRKPAFSLHRRLHSPGC*PSRCNC Trigger: GCAATTACATCGTGAAGGTCAACATCCAGGGGAATG...GAGGCGCCTGTGCAGACTGAAGGCTGGTTTTCTGACGTGCGCAATGGGCTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR TCA 90 bp | ACACAGCCCATTGCGCACGTCAGAAAACCAGCCTTCAGTCTGCACAGGCGCCTCGGGATAAGAATCAGCTaGACAGTCAAAGAGGACAGC | + |
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Preference number: 4 (lower is better) Translates to: TQPIAHVRKPAFSLHRRLGIRIS*TVKEDS Trigger: GCTGTCCTCTTTGACTGTTCAGCTGATTCTTATCCC...GAGGCGCCTGTGCAGACTGAAGGCTGGTTTTCTGACGTGCGCAATGGGCTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR GCA 90 bp | ACACAGCCCATTGCGCACGTCAGAAAACCAGCCTTCAGTCTGCACAGGCGCCTCGATCTGGATGTCAGATaGTGGAGTGTGGAAGCCATA | + |
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Preference number: 4 (lower is better) Translates to: TQPIAHVRKPAFSLHRRLDLDVR*WSVEAI Trigger: TATGGCTTCCACACTCCAGCATCTGACATCCAGATC...GAGGCGCCTGTGCAGACTGAAGGCTGGTTTTCTGACGTGCGCAATGGGCTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR CCA 90 bp | ACACAGCCCATTGCGCACGTCAGAAAACCAGCCTTCAGTCTGCACAGGCGCCTCTGGGGAGAAAAAGAGTaGCTGGAGTTGATGGAAATG | + |
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Preference number: 4 (lower is better) Translates to: TQPIAHVRKPAFSLHRRLWGEKE*LELMEM Trigger: CATTTCCATCAACTCCAGCCACTCTTTTTCTCCCCA...GAGGCGCCTGTGCAGACTGAAGGCTGGTTTTCTGACGTGCGCAATGGGCTGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR CCA 90 bp | ACACAGCCCATTGCGCACGTCAGAAAACCAGCCTTCAGTCTGCACAGGCGCCTCCAAAGGGTGTTGTTTTaGGGAGAAAAAGAGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: TQPIAHVRKPAFSLHRRLQRVLF*GEKEWL Trigger: CAGCCACTCTTTTTCTCCCCAAAACAACACCCTTTG...GAGGCGCCTGTGCAGACTGAAGGCTGGTTTTCTGACGTGCGCAATGGGCTGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR GCA 90 bp | ACACAGCCCATTGCGCACGTCAGAAAACCAGCCTTCAGTCTGCACAGGCGCCTCGAAGAAGGTGTATTTTaGAAAGAGAGAGCCCAACCA | + |
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Preference number: 4 (lower is better) Translates to: TQPIAHVRKPAFSLHRRLEEGVF*KERAQP Trigger: TGGTTGGGCTCTCTCTTTGCAAAATACACCTTCTTC...GAGGCGCCTGTGCAGACTGAAGGCTGGTTTTCTGACGTGCGCAATGGGCTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR GCA 90 bp | ACACAGCCCATTGCGCACGTCAGAAAACCAGCCTTCAGTCTGCACAGGCGCCTCATCATGGTGAACTTGTaGTGGTATTCCAAGTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: TQPIAHVRKPAFSLHRRLIMVNL*WYSKSG Trigger: TCCTGACTTGGAATACCAGCACAAGTTCACCATGAT...GAGGCGCCTGTGCAGACTGAAGGCTGGTTTTCTGACGTGCGCAATGGGCTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR GCA 90 bp | ACACAGCCCATTGCGCACGTCAGAAAACCAGCCTTCAGTCTGCACAGGCGCCTCTTGTATCTTCTGACTTaGAGACAGAGTTCCATTCCC | + |
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Preference number: 4 (lower is better) Translates to: TQPIAHVRKPAFSLHRRLLYLLT*RQSSIP Trigger: GGGAATGGAACTCTGTCTGCAAGTCAGAAGATACAA...GAGGCGCCTGTGCAGACTGAAGGCTGGTTTTCTGACGTGCGCAATGGGCTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR CCA 90 bp | ACACAGCCCATTGCGCACGTCAGAAAACCAGCCTTCAGTCTGCACAGGCGCCTCAGCCTAGCAAGTATTTaGGCATTGTGTGGGATCTTT | + |
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Preference number: 4 (lower is better) Translates to: TQPIAHVRKPAFSLHRRLSLASI*ALCGIF Trigger: AAAGATCCCACACAATGCCCAAATACTTGCTAGGCT...GAGGCGCCTGTGCAGACTGAAGGCTGGTTTTCTGACGTGCGCAATGGGCTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR TCA 90 bp | ACACAGCCCATTGCGCACGTCAGAAAACCAGCCTTCAGTCTGCACAGGCGCCTCCTGGGATATGCTGAATaGCTTCATAAATTGTTCCGT | + |
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Preference number: 4 (lower is better) Translates to: TQPIAHVRKPAFSLHRRLLGYAE*LHKLFR Trigger: ACGGAACAATTTATGAAGTCATTCAGCATATCCCAG...GAGGCGCCTGTGCAGACTGAAGGCTGGTTTTCTGACGTGCGCAATGGGCTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR TCA 90 bp | ACACTGTTGATACCAAAGTTCACTGAGAGCCAGGGAAAAGGCACAGTCTTACCTCATCGCGTCTTCCGGTaGTGTTGTTGTAAGCACAGC | + |
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Preference number: 4 (lower is better) Translates to: TLLIPKFTESQGKGTVLPHRVFR*CCCKHS Trigger: GCTGTGCTTACAACAACATCACCGGAAGACGCGATG...AGGTAAGACTGTGCCTTTTCCCTGGCTCTCAGTGAACTTTGGTATCAACAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR TCA 90 bp | ACACTGTTGATACCAAAGTTCACTGAGAGCCAGGGAAAAGGCACAGTCTTACCTTGGGTGGCATCATGGTaGACTTGTGCTGGTATTCCA | + |
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Preference number: 4 (lower is better) Translates to: TLLIPKFTESQGKGTVLPWVASW*TCAGIP Trigger: TGGAATACCAGCACAAGTTCACCATGATGCCACCCA...AGGTAAGACTGTGCCTTTTCCCTGGCTCTCAGTGAACTTTGGTATCAACAGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR TCA 90 bp | ACACTGTTGATACCAAAGTTCACTGAGAGCCAGGGAAAAGGCACAGTCTTACCTGAAGCAGGATGGAACTaGACCATTGGCTTCATGACA | + |
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Preference number: 4 (lower is better) Translates to: TLLIPKFTESQGKGTVLPEAGWN*TIGFMT Trigger: TGTCATGAAGCCAATGGTTCAGTTCCATCCTGCTTC...AGGTAAGACTGTGCCTTTTCCCTGGCTCTCAGTGAACTTTGGTATCAACAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR GCA 90 bp | CCAAATACACTGTTGATACCAAAGTTCACTGAGAGCCAGGGAAAAGGCACAGTCGTTGATGAGCAGAGATaGATTGGGTGGCATCATGGT | + |
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Preference number: 4 (lower is better) Translates to: PNTLLIPKFTESQGKGTVVDEQR*IGWHHG Trigger: ACCATGATGCCACCCAATGCATCTCTGCTCATCAAC...GACTGTGCCTTTTCCCTGGCTCTCAGTGAACTTTGGTATCAACAGTGTATTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR CCA 90 bp | CCAAATACACTGTTGATACCAAAGTTCACTGAGAGCCAGGGAAAAGGCACAGTCAGAGTTCCATTCCCCTaGATGTTGACCTTCACGATG | + |
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Preference number: 4 (lower is better) Translates to: PNTLLIPKFTESQGKGTVRVPFP*MLTFTM Trigger: CATCGTGAAGGTCAACATCCAGGGGAATGGAACTCT...GACTGTGCCTTTTCCCTGGCTCTCAGTGAACTTTGGTATCAACAGTGTATTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR CCA 90 bp | ACACTGTTGATACCAAAGTTCACTGAGAGCCAGGGAAAAGGCACAGTCTTACCTACCTACTTGACATCCTaGAAACACCAGATGCATCCG | + |
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Preference number: 4 (lower is better) Translates to: TLLIPKFTESQGKGTVLPTYLTS*KHQMHP Trigger: CGGATGCATCTGGTGTTTCCAGGATGTCAAGTAGGT...AGGTAAGACTGTGCCTTTTCCCTGGCTCTCAGTGAACTTTGGTATCAACAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR TCA 90 bp | CCAAATACACTGTTGATACCAAAGTTCACTGAGAGCCAGGGAAAAGGCACAGTCGTGACTTGTATCTTCTaGCTTGCAGACAGAGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: PNTLLIPKFTESQGKGTVVTCIF*LADRVP Trigger: TGGAACTCTGTCTGCAAGTCAGAAGATACAAGTCAC...GACTGTGCCTTTTCCCTGGCTCTCAGTGAACTTTGGTATCAACAGTGTATTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR TCA 90 bp | ACACTGTTGATACCAAAGTTCACTGAGAGCCAGGGAAAAGGCACAGTCTTACCTCAGGATCATCGACAGTaGCTTGTATCTTCTGACTTG | + |
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Preference number: 4 (lower is better) Translates to: TLLIPKFTESQGKGTVLPQDHRQ*LVSSDL Trigger: CAAGTCAGAAGATACAAGTCACTGTCGATGATCCTG...AGGTAAGACTGTGCCTTTTCCCTGGCTCTCAGTGAACTTTGGTATCAACAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR TCA 90 bp | CCAAATACACTGTTGATACCAAAGTTCACTGAGAGCCAGGGAAAAGGCACAGTCCTCCCAGGTCAACAGTaGATACTTCTCCCACTTTTA | + |
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Preference number: 4 (lower is better) Translates to: PNTLLIPKFTESQGKGTVLPGQQ*ILLPLL Trigger: TAAAAGTGGGAGAAGTATTCACTGTTGACCTGGGAG...GACTGTGCCTTTTCCCTGGCTCTCAGTGAACTTTGGTATCAACAGTGTATTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR GCA 90 bp | CCAAATACACTGTTGATACCAAAGTTCACTGAGAGCCAGGGAAAAGGCACAGTCCCTGGAAACACCAGATaGATCCGGAAAAGTCACAAA | + |
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Preference number: 4 (lower is better) Translates to: PNTLLIPKFTESQGKGTVPGNTR*IRKSHK Trigger: TTTGTGACTTTTCCGGATGCATCTGGTGTTTCCAGG...GACTGTGCCTTTTCCCTGGCTCTCAGTGAACTTTGGTATCAACAGTGTATTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR CCA 90 bp | CCAAATACACTGTTGATACCAAAGTTCACTGAGAGCCAGGGAAAAGGCACAGTCAACAGCCATATGATCTaGATGTCAGATGCTGGAGTG | + |
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Preference number: 4 (lower is better) Translates to: PNTLLIPKFTESQGKGTVNSHMI*MSDAGV Trigger: CACTCCAGCATCTGACATCCAGATCATATGGCTGTT...GACTGTGCCTTTTCCCTGGCTCTCAGTGAACTTTGGTATCAACAGTGTATTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR TCA 90 bp | CCAAATACACTGTTGATACCAAAGTTCACTGAGAGCCAGGGAAAAGGCACAGTCGATGCAACTTCTAAATaGGGCCCATGCTTAATGACA | + |
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Preference number: 4 (lower is better) Translates to: PNTLLIPKFTESQGKGTVDATSK*GPCLMT Trigger: TGTCATTAAGCATGGGCCTCATTTAGAAGTTGCATC...GACTGTGCCTTTTCCCTGGCTCTCAGTGAACTTTGGTATCAACAGTGTATTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR TCA 90 bp | ACACTGTTGATACCAAAGTTCACTGAGAGCCAGGGAAAAGGCACAGTCTTACCTGGCATCTTCATGGCCTaGAAATGTTTGAGCTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: TLLIPKFTESQGKGTVLPGIFMA*KCLSFS Trigger: AGAAAAGCTCAAACATTTTCAGGCCATGAAGATGCC...AGGTAAGACTGTGCCTTTTCCCTGGCTCTCAGTGAACTTTGGTATCAACAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR GCA 90 bp | ACACTGTTGATACCAAAGTTCACTGAGAGCCAGGGAAAAGGCACAGTCTTACCTATTCTGACTCTGGTCTaGCTTCTAGCTTCTGTCTTA | + |
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Preference number: 4 (lower is better) Translates to: TLLIPKFTESQGKGTVLPILTLV*LLASVL Trigger: TAAGACAGAAGCTAGAAGGCAGACCAGAGTCAGAAT...AGGTAAGACTGTGCCTTTTCCCTGGCTCTCAGTGAACTTTGGTATCAACAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR GCA 90 bp | CCAAATACACTGTTGATACCAAAGTTCACTGAGAGCCAGGGAAAAGGCACAGTCTCCCAGACAAGAACCTaGTATAAGAAGAAGGTGTAT | + |
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Preference number: 4 (lower is better) Translates to: PNTLLIPKFTESQGKGTVSQTRT*YKKKVY Trigger: ATACACCTTCTTCTTATAGCAGGTTCTTGTCTGGGA...GACTGTGCCTTTTCCCTGGCTCTCAGTGAACTTTGGTATCAACAGTGTATTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR GCA 90 bp | ACACTGTTGATACCAAAGTTCACTGAGAGCCAGGGAAAAGGCACAGTCTTACCTCACTCTGTATTTTCTTaGTGTTGTTCTGGGATATGC | + |
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Preference number: 4 (lower is better) Translates to: TLLIPKFTESQGKGTVLPHSVFS*CCSGIC Trigger: GCATATCCCAGAACAACAGCAAGAAAATACAGAGTG...AGGTAAGACTGTGCCTTTTCCCTGGCTCTCAGTGAACTTTGGTATCAACAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS TCA 90 bp | GAGTGTGGAAGCCATAGTGCACTGGAAGGTAGAGGGCCTGTCCCCTaGTGCCGTGGACAGTGTATGACGGCACGGTCACCTTCAGTCCCA | + |
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Preference number: 5 (lower is better) Translates to: ECGSHSALEGRGPVP*CRGQCMTARSPSVP Trigger: TGGGACTGAAGGTGACCGTGCCGTCATACACTGTCCACGGCATCAGGGGACAGGCCCTCTACCTTCCAGTGCACTATGGCTTCCACACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS TCA 90 bp | CACTGGAAGGTAGAGGGCCTGTCCCCTGATGCCGTGGACAGTGTATaGCGGCACGGTCACCTTCAGTCCCAGACAAGAACCTGCTATAAG | + |
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Preference number: 5 (lower is better) Translates to: HWKVEGLSPDAVDSV*RHGHLQSQTRTCYK Trigger: CTTATAGCAGGTTCTTGTCTGGGACTGAAGGTGACCGTGCCGTCATACACTGTCCACGGCATCAGGGGACAGGCCCTCTACCTTCCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR CAA 90 bp | ACACAGCCCATTGCGCACGTCAGAAAACCAGCCTTCAGTCTGCACAGGCGCCTCATGAGCAGAGATGCATaGGGTGGCATCATGGTGAAC | + |
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Preference number: 5 (lower is better) Translates to: TQPIAHVRKPAFSLHRRLMSRDA*GGIMVN Trigger: GTTCACCATGATGCCACCCAATGCATCTCTGCTCAT...GAGGCGCCTGTGCAGACTGAAGGCTGGTTTTCTGACGTGCGCAATGGGCTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR CAA 90 bp | ACACAGCCCATTGCGCACGTCAGAAAACCAGCCTTCAGTCTGCACAGGCGCCTCCCAAAGGGTGTTGTTTaGGGGAGAAAAAGAGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: TQPIAHVRKPAFSLHRRLPKGVV*GRKRVA Trigger: AGCCACTCTTTTTCTCCCCAAAACAACACCCTTTGG...GAGGCGCCTGTGCAGACTGAAGGCTGGTTTTCTGACGTGCGCAATGGGCTGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS CCA 90 bp | CTCATCGGTGAACTGCAGCGGGTTGATGAGCAGAGATGCATTGGGTaGCATCATGGTGAACTTGTGCTGGTATTCCAAGTCAGGAACCAC | + |
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Preference number: 5 (lower is better) Translates to: LIGELQRVDEQRCIG*HHGELVLVFQVRNH Trigger: GTGGTTCCTGACTTGGAATACCAGCACAAGTTCACCATGATGCCACCCAATGCATCTCTGCTCATCAACCCGCTGCAGTTCACCGATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049985.15 ENSMUST00000200854.2 ENSMUST00000201607.4 |
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| CDS-3UTR CAA 90 bp | ACACAGCCCATTGCGCACGTCAGAAAACCAGCCTTCAGTCTGCACAGGCGCCTCATCATCGACAGTGACTaGTATCTTCTGACTTGCAGA | + |
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Preference number: 5 (lower is better) Translates to: TQPIAHVRKPAFSLHRRLIIDSD*YLLTCR Trigger: TCTGCAAGTCAGAAGATACAAGTCACTGTCGATGAT...GAGGCGCCTGTGCAGACTGAAGGCTGGTTTTCTGACGTGCGCAATGGGCTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR CAA 90 bp | ACACAGCCCATTGCGCACGTCAGAAAACCAGCCTTCAGTCTGCACAGGCGCCTCATATTCCAGTTATACTaGCTAGTGGGGACAGGGATT | + |
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Preference number: 5 (lower is better) Translates to: TQPIAHVRKPAFSLHRRLIFQLY*LVGTGI Trigger: AATCCCTGTCCCCACTAGCAAGTATAACTGGAATAT...GAGGCGCCTGTGCAGACTGAAGGCTGGTTTTCTGACGTGCGCAATGGGCTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS GCA 90 bp | GTAATTGCCCTCATCGGTGAACTGCAGCGGGTTGATGAGCAGAGATaGATTGGGTGGCATCATGGTGAACTTGTGCTGGTATTCCAAGTC | + |
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Preference number: 5 (lower is better) Translates to: VIALIGELQRVDEQR*IGWHHGELVLVFQV Trigger: GACTTGGAATACCAGCACAAGTTCACCATGATGCCACCCAATGCATCTCTGCTCATCAACCCGCTGCAGTTCACCGATGAGGGCAATTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049985.15 ENSMUST00000200854.2 ENSMUST00000201607.4 |
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| CDS CCA 90 bp | TGTGTGGGATCTTTCAAACAGCCATATGATCTGGATGTCAGATGCTaGAGTGTGGAAGCCATAGTGCACTGGAAGGTAGAGGGCCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: CVGSFKQPYDLDVRC*SVEAIVHWKVEGLS Trigger: GGACAGGCCCTCTACCTTCCAGTGCACTATGGCTTCCACACTCCAGCATCTGACATCCAGATCATATGGCTGTTTGAAAGATCCCACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS CCA 90 bp | GCCCTGTTACACCATCAGAGGCAGGGGAAGACCTACTTGACATCCTaGAAACACCAGATGCATCCGGAAAAGTCACAAACTCGTAGATCC | + |
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Preference number: 5 (lower is better) Translates to: ALLHHQRQGKTYLTS*KHQMHPEKSQTRRS Trigger: GGATCTACGAGTTTGTGACTTTTCCGGATGCATCTGGTGTTTCCAGGATGTCAAGTAGGTCTTCCCCTGCCTCTGATGGTGTAACAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR CAA 90 bp | ACACAGCCCATTGCGCACGTCAGAAAACCAGCCTTCAGTCTGCACAGGCGCCTCTCACTCTGTATTTTCTaGCTGTTGTTCTGGGATATG | + |
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Preference number: 5 (lower is better) Translates to: TQPIAHVRKPAFSLHRRLSLCIF*LLFWDM Trigger: CATATCCCAGAACAACAGCAAGAAAATACAGAGTGA...GAGGCGCCTGTGCAGACTGAAGGCTGGTTTTCTGACGTGCGCAATGGGCTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS GCA 90 bp | CATTGTGTGGGATCTTTCAAACAGCCATATGATCTGGATGTCAGATaGTGGAGTGTGGAAGCCATAGTGCACTGGAAGGTAGAGGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: HCVGSFKQPYDLDVR*WSVEAIVHWKVEGL Trigger: CAGGCCCTCTACCTTCCAGTGCACTATGGCTTCCACACTCCAGCATCTGACATCCAGATCATATGGCTGTTTGAAAGATCCCACACAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR CAA 90 bp | ACACAGCCCATTGCGCACGTCAGAAAACCAGCCTTCAGTCTGCACAGGCGCCTCTGTATTTTCTTGCTGTaGTTCTGGGATATGCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: TQPIAHVRKPAFSLHRRLCIFLL*FWDMLN Trigger: ATTCAGCATATCCCAGAACAACAGCAAGAAAATACA...GAGGCGCCTGTGCAGACTGAAGGCTGGTTTTCTGACGTGCGCAATGGGCTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS GCA 90 bp | GGGTTGATGAGCAGAGATGCATTGGGTGGCATCATGGTGAACTTGTaGTGGTATTCCAAGTCAGGAACCACAGACTTATTAACGGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GLMSRDALGGIMVNL*WYSKSGTTDLLTEP Trigger: AGGCTCCGTTAATAAGTCTGTGGTTCCTGACTTGGAATACCAGCACAAGTTCACCATGATGCCACCCAATGCATCTCTGCTCATCAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049985.15 ENSMUST00000200854.2 ENSMUST00000201607.4 |
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| CDS CCA 90 bp | GCCCACATACTCAACAGCCCCAGAAGCAGGATGGAACTGAACCATTaGCTTCATGACAGGATCATCGACAGTGACTTGTATCTTCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: AHILNSPRSRMELNH*LHDRIIDSDLYLLT Trigger: AGTCAGAAGATACAAGTCACTGTCGATGATCCTGTCATGAAGCCAATGGTTCAGTTCCATCCTGCTTCTGGGGCTGTTGAGTATGTGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049985.15 ENSMUST00000200854.2 ENSMUST00000201607.4 |
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| CDS-3UTR CAA 90 bp | CCAAATACACTGTTGATACCAAAGTTCACTGAGAGCCAGGGAAAAGGCACAGTCGTGAACTGCAGCGGGTaGATGAGCAGAGATGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: PNTLLIPKFTESQGKGTVVNCSG*MSRDAL Trigger: CAATGCATCTCTGCTCATCAACCCGCTGCAGTTCAC...GACTGTGCCTTTTCCCTGGCTCTCAGTGAACTTTGGTATCAACAGTGTATTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR CAA 90 bp | ACACTGTTGATACCAAAGTTCACTGAGAGCCAGGGAAAAGGCACAGTCTTACCTCAGGGATTTTCCCCTTaGTGCAAGCTTCTCCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TLLIPKFTESQGKGTVLPQGFSP*CKLLQS Trigger: GGACTGGAGAAGCTTGCACAAAGGGGAAAATCCCTG...AGGTAAGACTGTGCCTTTTCCCTGGCTCTCAGTGAACTTTGGTATCAACAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR CAA 90 bp | ACACTGTTGATACCAAAGTTCACTGAGAGCCAGGGAAAAGGCACAGTCTTACCTCAGGGGAAGACCTACTaGACATCCTGGAAACACCAG | + |
|
Preference number: 5 (lower is better) Translates to: TLLIPKFTESQGKGTVLPQGKTY*TSWKHQ Trigger: CTGGTGTTTCCAGGATGTCAAGTAGGTCTTCCCCTG...AGGTAAGACTGTGCCTTTTCCCTGGCTCTCAGTGAACTTTGGTATCAACAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS TCA 90 bp | AATATCTTGCCCTGTTACACCATCAGAGGCAGGGGAAGACCTACTTaGCATCCTGGAAACACCAGATGCATCCGGAAAAGTCACAAACTC | + |
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Preference number: 5 (lower is better) Translates to: NILPCYTIRGRGRPT*HPGNTRCIRKSHKL Trigger: GAGTTTGTGACTTTTCCGGATGCATCTGGTGTTTCCAGGATGTCAAGTAGGTCTTCCCCTGCCTCTGATGGTGTAACAGGGCAAGATATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR CAA 90 bp | CCAAATACACTGTTGATACCAAAGTTCACTGAGAGCCAGGGAAAAGGCACAGTCCAGGTCAAGGTAATGTaGCCCACATACTCAACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PNTLLIPKFTESQGKGTVQVKVM*PTYSTA Trigger: GGCTGTTGAGTATGTGGGCAACATTACCTTGACCTG...GACTGTGCCTTTTCCCTGGCTCTCAGTGAACTTTGGTATCAACAGTGTATTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS GCA 90 bp | TGGCTTCATGACAGGATCATCGACAGTGACTTGTATCTTCTGACTTaGAGACAGAGTTCCATTCCCCTGGATGTTGACCTTCACGATGTA | + |
|
Preference number: 5 (lower is better) Translates to: WLHDRIIDSDLYLLT*RQSSIPLDVDLHDV Trigger: TACATCGTGAAGGTCAACATCCAGGGGAATGGAACTCTGTCTGCAAGTCAGAAGATACAAGTCACTGTCGATGATCCTGTCATGAAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049985.15 ENSMUST00000200854.2 ENSMUST00000201607.4 |
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| CDS-3UTR CAA 90 bp | CCAAATACACTGTTGATACCAAAGTTCACTGAGAGCCAGGGAAAAGGCACAGTCGAGCCTAGCAAGTATTaGGGCATTGTGTGGGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: PNTLLIPKFTESQGKGTVEPSKY*GIVWDL Trigger: AAGATCCCACACAATGCCCAAATACTTGCTAGGCTC...GACTGTGCCTTTTCCCTGGCTCTCAGTGAACTTTGGTATCAACAGTGTATTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR CAA 90 bp | ACACTGTTGATACCAAAGTTCACTGAGAGCCAGGGAAAAGGCACAGTCTTACCTGGCATCATGGTGAACTaGTGCTGGTATTCCAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TLLIPKFTESQGKGTVLPGIMVN*CWYSKS Trigger: TGACTTGGAATACCAGCACAAGTTCACCATGATGCC...AGGTAAGACTGTGCCTTTTCCCTGGCTCTCAGTGAACTTTGGTATCAACAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR CAA 90 bp | ACACTGTTGATACCAAAGTTCACTGAGAGCCAGGGAAAAGGCACAGTCTTACCTAAAGAGTGGCTGGAGTaGATGGAAATGGGTTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TLLIPKFTESQGKGTVLPKEWLE*MEMGFP Trigger: TGGGAAACCCATTTCCATCAACTCCAGCCACTCTTT...AGGTAAGACTGTGCCTTTTCCCTGGCTCTCAGTGAACTTTGGTATCAACAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR CAA 90 bp | ACACTGTTGATACCAAAGTTCACTGAGAGCCAGGGAAAAGGCACAGTCTTACCTAGAAGAAGGTGTATTTaGCAAAGAGAGAGCCCAACC | + |
|
Preference number: 5 (lower is better) Translates to: TLLIPKFTESQGKGTVLPRRRCI*QRESPT Trigger: GGTTGGGCTCTCTCTTTGCAAAATACACCTTCTTCT...AGGTAAGACTGTGCCTTTTCCCTGGCTCTCAGTGAACTTTGGTATCAACAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR CAA 90 bp | CCAAATACACTGTTGATACCAAAGTTCACTGAGAGCCAGGGAAAAGGCACAGTCGCAAGTATTTGGGCATaGTGTGGGATCTTTCAAACA | + |
|
Preference number: 5 (lower is better) Translates to: PNTLLIPKFTESQGKGTVASIWA*CGIFQT Trigger: TGTTTGAAAGATCCCACACAATGCCCAAATACTTGC...GACTGTGCCTTTTCCCTGGCTCTCAGTGAACTTTGGTATCAACAGTGTATTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR CAA 90 bp | CCAAATACACTGTTGATACCAAAGTTCACTGAGAGCCAGGGAAAAGGCACAGTCAGTATTGTCAGATCTTaGGATCCAGGAGTAGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PNTLLIPKFTESQGKGTVSIVRS*DPGVGV Trigger: AACACCTACTCCTGGATCCAAAGATCTGACAATACT...GACTGTGCCTTTTCCCTGGCTCTCAGTGAACTTTGGTATCAACAGTGTATTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR CAA 90 bp | CCAAATACACTGTTGATACCAAAGTTCACTGAGAGCCAGGGAAAAGGCACAGTCATGACATGTGTAGTATaGTCAGATCTTTGGATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PNTLLIPKFTESQGKGTVMTCVV*SDLWIQ Trigger: CTGGATCCAAAGATCTGACAATACTACACATGTCAT...GACTGTGCCTTTTCCCTGGCTCTCAGTGAACTTTGGTATCAACAGTGTATTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS-3UTR CAA 90 bp | ACACTGTTGATACCAAAGTTCACTGAGAGCCAGGGAAAAGGCACAGTCTTACCTTTCCAATGTCTTCTTTaGTCACTGGAACAATCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: TLLIPKFTESQGKGTVLPFQCLL*SLEQSK Trigger: TTTGGATTGTTCCAGTGACAAAAGAAGACATTGGAA...AGGTAAGACTGTGCCTTTTCCCTGGCTCTCAGTGAACTTTGGTATCAACAGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS TCA 72 bp | GTAGAGGGCCTGTCCCCTGATGCCGTGGACAGTGTATaGCGGCACGGTCACCTTCAGTCCCAGACAAGAACC | + |
|
Preference number: 6 (lower is better) Translates to: VEGLSPDAVDSV*RHGHLQSQTRT Trigger: GGTTCTTGTCTGGGACTGAAGGTGACCGTGCCGTCATACACTGTCCACGGCATCAGGGGACAGGCCCTCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS TCA 72 bp | AGCCATAGTGCACTGGAAGGTAGAGGGCCTGTCCCCTaGTGCCGTGGACAGTGTATGACGGCACGGTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: SHSALEGRGPVP*CRGQCMTARSP Trigger: AGGTGACCGTGCCGTCATACACTGTCCACGGCATCAGGGGACAGGCCCTCTACCTTCCAGTGCACTATGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS CCA 72 bp | GATGTCAGATGCTGGAGTGTGGAAGCCATAGTGCACTaGAAGGTAGAGGGCCTGTCCCCTGATGCCGTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: DVRCWSVEAIVH*KVEGLSPDAVD Trigger: GTCCACGGCATCAGGGGACAGGCCCTCTACCTTCCAGTGCACTATGGCTTCCACACTCCAGCATCTGACATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS CAA 72 bp | CTGGTACCTCCTTCTACCTGGCAGGTCAAGGTAATGTaGCCCACATACTCAACAGCCCCAGAAGCAGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: LVPPSTWQVKVM*PTYSTAPEAGW Trigger: CCATCCTGCTTCTGGGGCTGTTGAGTATGTGGGCAACATTACCTTGACCTGCCAGGTAGAAGGAGGTACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049985.15 ENSMUST00000200854.2 ENSMUST00000201607.4 |
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| CDS GCA 72 bp | CTCATCGGTGAACTGCAGCGGGTTGATGAGCAGAGATaGATTGGGTGGCATCATGGTGAACTTGTGCTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: LIGELQRVDEQR*IGWHHGELVLV Trigger: TACCAGCACAAGTTCACCATGATGCCACCCAATGCATCTCTGCTCATCAACCCGCTGCAGTTCACCGATGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049985.15 ENSMUST00000200854.2 ENSMUST00000201607.4 |
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| CDS CAA 72 bp | TCGGTGAACTGCAGCGGGTTGATGAGCAGAGATGCATaGGGTGGCATCATGGTGAACTTGTGCTGGTATTCC | + |
|
Preference number: 6 (lower is better) Translates to: SVNCSGLMSRDA*GGIMVNLCWYS Trigger: GGAATACCAGCACAAGTTCACCATGATGCCACCCAATGCATCTCTGCTCATCAACCCGCTGCAGTTCACCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049985.15 ENSMUST00000200854.2 ENSMUST00000201607.4 |
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| CDS CAA 90 bp | TTGCCCTCATCGGTGAACTGCAGCGGGTTGATGAGCAGAGATGCATaGGGTGGCATCATGGTGAACTTGTGCTGGTATTCCAAGTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LPSSVNCSGLMSRDA*GGIMVNLCWYSKSG Trigger: TCCTGACTTGGAATACCAGCACAAGTTCACCATGATGCCACCCAATGCATCTCTGCTCATCAACCCGCTGCAGTTCACCGATGAGGGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049985.15 ENSMUST00000200854.2 ENSMUST00000201607.4 |
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| CDS TCA 72 bp | CCCTGTTACACCATCAGAGGCAGGGGAAGACCTACTTaGCATCCTGGAAACACCAGATGCATCCGGAAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: PCYTIRGRGRPT*HPGNTRCIRKS Trigger: ACTTTTCCGGATGCATCTGGTGTTTCCAGGATGTCAAGTAGGTCTTCCCCTGCCTCTGATGGTGTAACAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS CCA 72 bp | GAACTGCAGCGGGTTGATGAGCAGAGATGCATTGGGTaGCATCATGGTGAACTTGTGCTGGTATTCCAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: ELQRVDEQRCIG*HHGELVLVFQV Trigger: GACTTGGAATACCAGCACAAGTTCACCATGATGCCACCCAATGCATCTCTGCTCATCAACCCGCTGCAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049985.15 ENSMUST00000200854.2 ENSMUST00000201607.4 |
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| CDS TCA 72 bp | GATCCAGGAGTAGGTGTTAGGGGGATAAGAATCAGCTaGACAGTCAAAGAGGACAGCTTCTCCCAGGTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: DPGVGVRGIRIS*TVKEDSFSQVN Trigger: GTTGACCTGGGAGAAGCTGTCCTCTTTGACTGTTCAGCTGATTCTTATCCCCCTAACACCTACTCCTGGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS CCA 72 bp | CACCATCAGAGGCAGGGGAAGACCTACTTGACATCCTaGAAACACCAGATGCATCCGGAAAAGTCACAAACT | + |
|
Preference number: 6 (lower is better) Translates to: HHQRQGKTYLTS*KHQMHPEKSQT Trigger: AGTTTGTGACTTTTCCGGATGCATCTGGTGTTTCCAGGATGTCAAGTAGGTCTTCCCCTGCCTCTGATGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS CAA 90 bp | AGCGGGTTGATGAGCAGAGATGCATTGGGTGGCATCATGGTGAACTaGTGCTGGTATTCCAAGTCAGGAACCACAGACTTATTAACGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SGLMSRDALGGIMVN*CWYSKSGTTDLLTE Trigger: CTCCGTTAATAAGTCTGTGGTTCCTGACTTGGAATACCAGCACAAGTTCACCATGATGCCACCCAATGCATCTCTGCTCATCAACCCGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049985.15 ENSMUST00000200854.2 ENSMUST00000201607.4 |
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| CDS CCA 72 bp | CTCAACAGCCCCAGAAGCAGGATGGAACTGAACCATTaGCTTCATGACAGGATCATCGACAGTGACTTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: LNSPRSRMELNH*LHDRIIDSDLY Trigger: ATACAAGTCACTGTCGATGATCCTGTCATGAAGCCAATGGTTCAGTTCCATCCTGCTTCTGGGGCTGTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049985.15 ENSMUST00000200854.2 ENSMUST00000201607.4 |
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| CDS GCA 72 bp | GGATCTTTCAAACAGCCATATGATCTGGATGTCAGATaGTGGAGTGTGGAAGCCATAGTGCACTGGAAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: GSFKQPYDLDVR*WSVEAIVHWKV Trigger: TACCTTCCAGTGCACTATGGCTTCCACACTCCAGCATCTGACATCCAGATCATATGGCTGTTTGAAAGATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS GCA 72 bp | GACAGGATCATCGACAGTGACTTGTATCTTCTGACTTaGAGACAGAGTTCCATTCCCCTGGATGTTGACCTT | + |
|
Preference number: 6 (lower is better) Translates to: DRIIDSDLYLLT*RQSSIPLDVDL Trigger: AAGGTCAACATCCAGGGGAATGGAACTCTGTCTGCAAGTCAGAAGATACAAGTCACTGTCGATGATCCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049985.15 ENSMUST00000200854.2 ENSMUST00000201607.4 |
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| CDS CCA 72 bp | TCTTTCAAACAGCCATATGATCTGGATGTCAGATGCTaGAGTGTGGAAGCCATAGTGCACTGGAAGGTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SFKQPYDLDVRC*SVEAIVHWKVE Trigger: CTCTACCTTCCAGTGCACTATGGCTTCCACACTCCAGCATCTGACATCCAGATCATATGGCTGTTTGAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS CAA 72 bp | ATGAGCAGAGATGCATTGGGTGGCATCATGGTGAACTaGTGCTGGTATTCCAAGTCAGGAACCACAGACTTA | + |
|
Preference number: 6 (lower is better) Translates to: MSRDALGGIMVN*CWYSKSGTTDL Trigger: TAAGTCTGTGGTTCCTGACTTGGAATACCAGCACAAGTTCACCATGATGCCACCCAATGCATCTCTGCTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049985.15 ENSMUST00000200854.2 ENSMUST00000201607.4 |
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| CDS TCA 72 bp | TTCATGACAGGATCATCGACAGTGACTTGTATCTTCTaGCTTGCAGACAGAGTTCCATTCCCCTGGATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: FMTGSSTVTCIF*LADRVPFPWML Trigger: CAACATCCAGGGGAATGGAACTCTGTCTGCAAGTCAGAAGATACAAGTCACTGTCGATGATCCTGTCATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049985.15 ENSMUST00000200854.2 ENSMUST00000201607.4 |
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| CDS GCA 72 bp | AGCAGAGATGCATTGGGTGGCATCATGGTGAACTTGTaGTGGTATTCCAAGTCAGGAACCACAGACTTATTA | + |
|
Preference number: 6 (lower is better) Translates to: SRDALGGIMVNL*WYSKSGTTDLL Trigger: TAATAAGTCTGTGGTTCCTGACTTGGAATACCAGCACAAGTTCACCATGATGCCACCCAATGCATCTCTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049985.15 ENSMUST00000200854.2 ENSMUST00000201607.4 |
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| CDS CAA 72 bp | AACCATTGGCTTCATGACAGGATCATCGACAGTGACTaGTATCTTCTGACTTGCAGACAGAGTTCCATTCCC | + |
|
Preference number: 6 (lower is better) Translates to: NHWLHDRIIDSD*YLLTCRQSSIP Trigger: GGGAATGGAACTCTGTCTGCAAGTCAGAAGATACAAGTCACTGTCGATGATCCTGTCATGAAGCCAATGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049985.15 ENSMUST00000200854.2 ENSMUST00000201607.4 |
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| CDS CAA 72 bp | TTGACACGAGGCAGGTGTAGTTTCCAATGTCTTCTTTaGTCACTGGAACAATCCAAAGGGTGTTGTTTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LTRGRCSFQCLL*SLEQSKGCCFG Trigger: CCCAAAACAACACCCTTTGGATTGTTCCAGTGACAAAAGAAGACATTGGAAACTACACCTGCCTCGTGTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049985.15 ENSMUST00000200854.2 ENSMUST00000201607.4 |
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| CDS CAA 72 bp | ATGCTGAATGACTTCATAAATTGTTCCGTGAATATCTaGCCCTGTTACACCATCAGAGGCAGGGGAAGACCT | + |
|
Preference number: 6 (lower is better) Translates to: MLNDFINCSVNI*PCYTIRGRGRP Trigger: AGGTCTTCCCCTGCCTCTGATGGTGTAACAGGGCAAGATATTCACGGAACAATTTATGAAGTCATTCAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS TCA 72 bp | CATAATGATATCACTTTCCATCTCACTGACGGGGTTTaGCACGAGGCAGGTGTAGTTTCCAATGTCTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: HNDITFHLTDGV*HEAGVVSNVFF Trigger: AAAGAAGACATTGGAAACTACACCTGCCTCGTGTCAAACCCCGTCAGTGAGATGGAAAGTGATATCATTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049985.15 ENSMUST00000201607.4 |
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| CDS TCA 72 bp | AACAGTCAAAGAGGACAGCTTCTCCCAGGTCAACAGTaGATACTTCTCCCACTTTTAGCCCTTTATCAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: NSQRGQLLPGQQ*ILLPLLALYQN Trigger: ATTCTGATAAAGGGCTAAAAGTGGGAGAAGTATTCACTGTTGACCTGGGAGAAGCTGTCCTCTTTGACTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049985.15 ENSMUST00000201607.4 |
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| CDS CAA 72 bp | CCCATGCTTAATGACATGTGTAGTATTGTCAGATCTTaGGATCCAGGAGTAGGTGTTAGGGGGATAAGAATC | + |
|
Preference number: 6 (lower is better) Translates to: PMLNDMCSIVRS*DPGVGVRGIRI Trigger: GATTCTTATCCCCCTAACACCTACTCCTGGATCCAAAGATCTGACAATACTACACATGTCATTAAGCATGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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| CDS TCA 72 bp | CTGTATTTTCTTGCTGTTGTTCTGGGATATGCTGAATaGCTTCATAAATTGTTCCGTGAATATCTTGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LYFLAVVLGYAE*LHKLFREYLAL Trigger: CAGGGCAAGATATTCACGGAACAATTTATGAAGTCATTCAGCATATCCCAGAACAACAGCAAGAAAATACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049985.15 |
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