Pregenerated sensors for HEPACAM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046240Ensembl transcript IDs: ENSMUST00000051839.9, ENSMUST00000215951.2
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCAGCGCACATGCAACCGGGTTTAACACCAAGATCAGCCATTTGTaGAAACTCACACGCGTGTGCACCCTAAACGGGGATCAGGCCACG | + |
|
Preference number: 1 (lower is better) Translates to: PSAHATGFNTKISHL*KLTRVCTLNGDQAT Trigger: CGTGGCCTGATCCCCGTTTAGGGTGCACACGCGTGTGAGTTTGCACAAATGGCTGATCTTGGTGTTAAACCCGGTTGCATGTGCGCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR TCA 90 bp | CTATTCATGTGCTGTTTTTACAGCTCTGTCCACTGTCCTGGGTTCTaGGCATCTAGGACCACGGCAGGTGGAAAGCAGGAGGCGAGGGGG | + |
|
Preference number: 1 (lower is better) Translates to: LFMCCFYSSVHCPGF*ASRTTAGGKQEARG Trigger: CCCCCTCGCCTCCTGCTTTCCACCTGCCGTGGTCCTAGATGCTCAGAACCCAGGACAGTGGACAGAGCTGTAAAAACAGCACATGAATAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR CCA 90 bp | TTATGGTGGATGAGGCACCTGGGGAGGTTAGTGGATTGTGGGTTCTaGCTAAGTAAGGAGAGCTGCAGACACACCTGCCACGTGAGCAGG | + |
|
Preference number: 1 (lower is better) Translates to: LWWMRHLGRLVDCGF*LSKESCRHTCHVSR Trigger: CCTGCTCACGTGGCAGGTGTGTCTGCAGCTCTCCTTACTTAGCCAGAACCCACAATCCACTAACCTCCCCAGGTGCCTCATCCACCATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR CCA 90 bp | GAGCATCTAGGACCACGGCAGGTGGAAAGCAGGAGGCGAGGGGGTTaGCCATCTTGCTTTGACATGTTGGGGCATGTTAAGCTTCTTTCT | + |
|
Preference number: 1 (lower is better) Translates to: EHLGPRQVESRRRGG*PSCFDMLGHVKLLS Trigger: AGAAAGAAGCTTAACATGCCCCAACATGTCAAAGCAAGATGGCCAACCCCCTCGCCTCCTGCTTTCCACCTGCCGTGGTCCTAGATGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR CCA 90 bp | AGGGTATCTGTATACACAGTGATCTTGACAGGCAGGCTGCGGACCTaGCTGATGGGGTTCTCCACCACACAGCTGTACAGGTCGTCATCT | + |
|
Preference number: 1 (lower is better) Translates to: RVSVYTVILTGRLRT*LMGFSTTQLYRSSS Trigger: AGATGACGACCTGTACAGCTGTGTGGTGGAGAACCCCATCAGCCAGGTCCGCAGCCTGCCTGTCAAGATCACTGTGTATACAGATACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215951.2 |
||
| 3UTR GCA 90 bp | GGGTTTAACACCAAGATCAGCCATTTGTGCAAACTCACACGCGTGTaGACCCTAAACGGGGATCAGGCCACGATCTCCTTTCACTCCTGG | + |
|
Preference number: 1 (lower is better) Translates to: GFNTKISHLCKLTRV*TLNGDQATISFHSW Trigger: CCAGGAGTGAAAGGAGATCGTGGCCTGATCCCCGTTTAGGGTGCACACGCGTGTGAGTTTGCACAAATGGCTGATCTTGGTGTTAAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR CCA 90 bp | GCTTCTCCTAACCTGCCTGCACTATCGCCTACAAGTACTATTTTATaGTGGATGAGGCACCTGGGGAGGTTAGTGGATTGTGGGTTCTGG | + |
|
Preference number: 1 (lower is better) Translates to: ASPNLPALSPTSTIL*WMRHLGRLVDCGFW Trigger: CCAGAACCCACAATCCACTAACCTCCCCAGGTGCCTCATCCACCATAAAATAGTACTTGTAGGCGATAGTGCAGGCAGGTTAGGAGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR CCA 90 bp | TCTCCTAACCTGCCTGCACTATCGCCTACAAGTACTATTTTATGGTaGATGAGGCACCTGGGGAGGTTAGTGGATTGTGGGTTCTGGCTA | + |
|
Preference number: 1 (lower is better) Translates to: SPNLPALSPTSTILW*MRHLGRLVDCGFWL Trigger: TAGCCAGAACCCACAATCCACTAACCTCCCCAGGTGCCTCATCCACCATAAAATAGTACTTGTAGGCGATAGTGCAGGCAGGTTAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR TCA 90 bp | TTCTGTGGTGCTCCGTGGCTCTGTAGCAGGGTTTTCATCTGGCTCTaGGGAATCCTTATCCTTCAGGATATAGAGTGCCATTGGGTTCTT | + |
|
Preference number: 1 (lower is better) Translates to: FCGAPWLCSRVFIWL*GILILQDIECHWVL Trigger: AAGAACCCAATGGCACTCTATATCCTGAAGGATAAGGATTCCTCAGAGCCAGATGAAAACCCTGCTACAGAGCCACGGAGCACCACAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215951.2 |
||
| 3UTR TCA 90 bp | GGTGTGGAGGTGATGGATATGGGGTCTTGGAAGTTGTTCATGAGATaGTGCAGAAGAAAAGATGAAGTTGTACGAGTCGAGGAGGGACAA | + |
|
Preference number: 1 (lower is better) Translates to: GVEVMDMGSWKLFMR*CRRKDEVVRVEEGQ Trigger: TTGTCCCTCCTCGACTCGTACAACTTCATCTTTTCTTCTGCATCATCTCATGAACAACTTCCAAGACCCCATATCCATCACCTCCACACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR TCA 90 bp | TATGGGGTCTTGGAAGTTGTTCATGAGATGATGCAGAAGAAAAGATaGAGTTGTACGAGTCGAGGAGGGACAAGAGATTCAAGGGTCCCT | + |
|
Preference number: 1 (lower is better) Translates to: YGVLEVVHEMMQKKR*SCTSRGGTRDSRVP Trigger: AGGGACCCTTGAATCTCTTGTCCCTCCTCGACTCGTACAACTTCATCTTTTCTTCTGCATCATCTCATGAACAACTTCCAAGACCCCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR-3UTR CCA 90 bp | CGGCCTGGCGAGCTCGGGGCCCGCGGTGGCGACGTGTGCGTCCGGCCAGTGGCAGGCAGGCTGCGGACCTaGCTGATGGGGTTCTCCACC | + |
|
Preference number: 2 (lower is better) Translates to: RPGELGARGGDVCVRPVAGRLRT*LMGFST Trigger: GGTGGAGAACCCCATCAGCCAGGTCCGCAGCCTGCC...TGCCACTGGCCGGACGCACACGTCGCCACCGCGGGCCCCGAGCTCGCCAGGCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215951.2 |
||
| 3UTR-3UTR TCA 90 bp | CGAGCTCGGGGCCCGCGGTGGCGACGTGTGCGTCCGGCCAGTGGCAGGGGAACGGCATTCGGGAGTCATTaGGGAGGGGTTTGCCATCCT | + |
|
Preference number: 2 (lower is better) Translates to: RARGPRWRRVRPASGRGTAFGSH*GGVCHP Trigger: AGGATGGCAAACCCCTCCTCAATGACTCCCGAATGC...CGTTCCCCTGCCACTGGCCGGACGCACACGTCGCCACCGCGGGCCCCGAGCTCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215951.2 |
||
| 3UTR-3UTR CCA 90 bp | CCGGAGAGCGGCCGGGCACGGGCGGCGACACGGAGTAGCCAGGGGGACCGGGTTGATATAGAGTGCCATTaGGTTCTTCCGCTCCTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: PESGRARAATRSSQGDRVDIECH*VLPLLF Trigger: GAACAGGAGCGGAAGAACCCAATGGCACTCTATATC...AACCCGGTCCCCCTGGCTACTCCGTGTCGCCGCCCGTGCCCGGCCGCTCTCCGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215951.2 |
||
| 3UTR-3UTR CCA 90 bp | GCAAACTGGAAGGAAGACCAGTATGACACACTTTTGGGGAGGCCACTGGAGGCCGGGGTTAGAGGCATGTaGGATTGGGAGGTGGATGGG | + |
|
Preference number: 2 (lower is better) Translates to: ANWKEDQYDTLLGRPLEAGVRGM*DWEVDG Trigger: CCCATCCACCTCCCAATCCCACATGCCTCTAACCCC...GGCCTCCAGTGGCCTCCCCAAAAGTGTGTCATACTGGTCTTCCTTCCAGTTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR-3UTR CCA 90 bp | TTGACAGGCAGGCTGCGGACCTGGCTGATGGGGTTCTCCACCACACAGCTGTACATGGTGAGCACCTTTTaGTCAGGGGACAGGAGCATT | + |
|
Preference number: 2 (lower is better) Translates to: LTGRLRTWLMGFSTTQLYMVSTF*SGDRSI Trigger: AATGCTCCTGTCCCCTGACCAAAAGGTGCTCACCAT...GTACAGCTGTGTGGTGGAGAACCCCATCAGCCAGGTCCGCAGCCTGCCTGTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215951.2 |
||
| 3UTR CAA 90 bp | TCCTGTTCTCCACTTCGGGGTAGGGTATCTGTATACACAGTGATCTaGACAGGCAGGCTGCGGACCTGGCTGATGGGGTTCTCCACCACA | + |
|
Preference number: 2 (lower is better) Translates to: SCSPLRGRVSVYTVI*TGRLRTWLMGFSTT Trigger: TGTGGTGGAGAACCCCATCAGCCAGGTCCGCAGCCTGCCTGTCAAGATCACTGTGTATACAGATACCCTACCCCGAAGTGGAGAACAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215951.2 |
||
| 3UTR CAA 90 bp | AAACCCAGCGCACATGCAACCGGGTTTAACACCAAGATCAGCCATTaGTGCAAACTCACACGCGTGTGCACCCTAAACGGGGATCAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: KPSAHATGFNTKISH*CKLTRVCTLNGDQA Trigger: GGCCTGATCCCCGTTTAGGGTGCACACGCGTGTGAGTTTGCACAAATGGCTGATCTTGGTGTTAAACCCGGTTGCATGTGCGCTGGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR CAA 90 bp | CAGGTCGTCATCTTCCATGAGTACTCGGGTGATGGTGAGCACCTTTaGGTCAGGGGACAGGAGCATTCGGGAGTCATTGAGGAGGGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: QVVIFHEYSGDGEHL*VRGQEHSGVIEEGF Trigger: AAACCCCTCCTCAATGACTCCCGAATGCTCCTGTCCCCTGACCAAAAGGTGCTCACCATCACCCGAGTACTCATGGAAGATGACGACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215951.2 |
||
| 3UTR-3UTR CCA 90 bp | GCAAACTGGAAGGAAGACCAGTATGACACACTTTTGGGGAGGCCACTGGAGGCCATCTCCTTTCACTCCTaGCCAGAGGCATCAGGACTT | + |
|
Preference number: 2 (lower is better) Translates to: ANWKEDQYDTLLGRPLEAISFHS*PEASGL Trigger: AAGTCCTGATGCCTCTGGCCAGGAGTGAAAGGAGAT...GGCCTCCAGTGGCCTCCCCAAAAGTGTGTCATACTGGTCTTCCTTCCAGTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR-3UTR CCA 90 bp | ACTGTCCTGGGTTCTGAGCATCTAGGACCACGGCAGGTGGAAAGCAGGAGGCGATATCACCTGGAAAGATaGGGAAGCAGATGTCCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: TVLGSEHLGPRQVESRRRYHLER*GSRCPE Trigger: TTCTGGACATCTGCTTCCCCATCTTTCCAGGTGATA...TCGCCTCCTGCTTTCCACCTGCCGTGGTCCTAGATGCTCAGAACCCAGGACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR-3UTR GCA 90 bp | ACACAGGCAAACCAGAAATCTTGGTGCCTGCAGGGCCGGGGTGAAGTGTGTTCTAAGATCAGCCATTTGTaGAAACTCACACGCGTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: TQANQKSWCLQGRGEVCSKISHL*KLTRVC Trigger: GCACACGCGTGTGAGTTTGCACAAATGGCTGATCTT...AGAACACACTTCACCCCGGCCCTGCAGGCACCAAGATTTCTGGTTTGCCTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR CAA 90 bp | CATCTGGCTCTGAGGAATCCTTATCCTTCAGGATATAGAGTGCCATaGGGTTCTTCCGCTCCTGTTCTCCACTTCGGGGTAGGGTATCTG | + |
|
Preference number: 2 (lower is better) Translates to: HLALRNPYPSGYRVP*GSSAPVLHFGVGYL Trigger: CAGATACCCTACCCCGAAGTGGAGAACAGGAGCGGAAGAACCCAATGGCACTCTATATCCTGAAGGATAAGGATTCCTCAGAGCCAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215951.2 |
||
| 3UTR-3UTR CCA 90 bp | ACACAGGCAAACCAGAAATCTTGGTGCCTGCAGGGCCGGGGTGAAGTGTGTTCTCTCATGAACGCAAACTaGAAGGAAGACCAGTATGAC | + |
|
Preference number: 2 (lower is better) Translates to: TQANQKSWCLQGRGEVCSLMNAN*KEDQYD Trigger: GTCATACTGGTCTTCCTTCCAGTTTGCGTTCATGAG...AGAACACACTTCACCCCGGCCCTGCAGGCACCAAGATTTCTGGTTTGCCTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR-3UTR CCA 90 bp | GCAAACTGGAAGGAAGACCAGTATGACACACTTTTGGGGAGGCCACTGGAGGCCTTCACTCTTATCACCTaGAAAGATGGGGAAGCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: ANWKEDQYDTLLGRPLEAFTLIT*KDGEAD Trigger: ATCTGCTTCCCCATCTTTCCAGGTGATAAGAGTGAA...GGCCTCCAGTGGCCTCCCCAAAAGTGTGTCATACTGGTCTTCCTTCCAGTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR-3UTR CCA 90 bp | CCTTATCCTTCAGGATATAGAGTGCCATTGGGTTCTTCCGCTCCTGTTCTCCACTTGGTGCCATTCTCATaGGAGCAGTTGAGGGTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: PYPSGYRVPLGSSAPVLHLVPFS*EQLRVK Trigger: CTTCACCCTCAACTGCTCCCATGAGAATGGCACCAA...GTGGAGAACAGGAGCGGAAGAACCCAATGGCACTCTATATCCTGAAGGATAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215951.2 |
||
| 3UTR-3UTR TCA 90 bp | ACACAGGCAAACCAGAAATCTTGGTGCCTGCAGGGCCGGGGTGAAGTGTGTTCTCTTGGAAGTTGTTCATaGGATGATGCAGAAGAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: TQANQKSWCLQGRGEVCSLGSCS*DDAEEK Trigger: CTTTTCTTCTGCATCATCTCATGAACAACTTCCAAG...AGAACACACTTCACCCCGGCCCTGCAGGCACCAAGATTTCTGGTTTGCCTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR CAA 90 bp | TCACCCCTGTATCTCAAGGCTGAGCAACAGGTAGTCTTCCAAGTCTaGCTTCTCCTAACCTGCCTGCACTATCGCCTACAAGTACTATTT | + |
|
Preference number: 2 (lower is better) Translates to: SPLYLKAEQQVVFQV*LLLTCLHYRLQVLF Trigger: AAATAGTACTTGTAGGCGATAGTGCAGGCAGGTTAGGAGAAGCAAGACTTGGAAGACTACCTGTTGCTCAGCCTTGAGATACAGGGGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR-3UTR TCA 90 bp | CTTCTTGTCTTTCATCTATTCATGTGCTGTTTTTACAGCTCTGTCCACTGTCCTACAGCTCATACCCACTaGGAACACAGCCAGAGAACA | + |
|
Preference number: 2 (lower is better) Translates to: LLVFHLFMCCFYSSVHCPTAHTH*EHSQRT Trigger: TGTTCTCTGGCTGTGTTCTCAGTGGGTATGAGCTGT...AGGACAGTGGACAGAGCTGTAAAAACAGCACATGAATAGATGAAAGACAAGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR-3UTR CCA 90 bp | CTTCTTGTCTTTCATCTATTCATGTGCTGTTTTTACAGCTCTGTCCACTGTCCTTGTGGGATTGGGAGGTaGATGGGAAGTATAAACACT | + |
|
Preference number: 2 (lower is better) Translates to: LLVFHLFMCCFYSSVHCPCGIGR*MGSINT Trigger: AGTGTTTATACTTCCCATCCACCTCCCAATCCCACA...AGGACAGTGGACAGAGCTGTAAAAACAGCACATGAATAGATGAAAGACAAGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR-3UTR CCA 90 bp | TCGTTTCATCAAAAGTTTATTGAGCATCCAGGTTGTGCTATGCACTCTGCTAGAGAAGAAGAGCATGAATaGTTAAAACCAGGTCCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: SFHQKFIEHPGCAMHSAREEEHE*LKPGPC Trigger: ACAAGGACCTGGTTTTAACCATTCATGCTCTTCTTC...TCTAGCAGAGTGCATAGCACAACCTGGATGCTCAATAAACTTTTGATGAAACGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR CCA 72 bp | GCTGCGCGAGCGGCCTGGCGAGCTCGGGGCCCGCGGTaGCGACGTGTGCGTCCGGCCAGTGGCAGGGGAACG | + |
|
Preference number: 3 (lower is better) Translates to: AARAAWRARGPR*RRVRPASGRGT Trigger: CGTTCCCCTGCCACTGGCCGGACGCACACGTCGCCACCGCGGGCCCCGAGCTCGCCAGGCCGCTCGCGCAGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215951.2 |
||
| 3UTR-3UTR CAA 90 bp | CGACGTGTGCGTCCGGCCAGTGGCAGGGGAACGTGCTGGGGAGCGCGGGTAGCGTTCTCATGGGAGCAGTaGAGGGTGAAGGCCTCACTG | + |
|
Preference number: 3 (lower is better) Translates to: RRVRPASGRGTCWGARVAFSWEQ*RVKASL Trigger: CAGTGAGGCCTTCACCCTCAACTGCTCCCATGAGAA...CGCTACCCGCGCTCCCCAGCACGTTCCCCTGCCACTGGCCGGACGCACACGTCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215951.2 |
||
| 3UTR-3UTR CAA 90 bp | CGACGTGTGCGTCCGGCCAGTGGCAGGGGAACGTGCTGGGGAGCGCGGGTAGCGGATGGTGAGCACCTTTaGGTCAGGGGACAGGAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: RRVRPASGRGTCWGARVADGEHL*VRGQEH Trigger: ATGCTCCTGTCCCCTGACCAAAAGGTGCTCACCATC...CGCTACCCGCGCTCCCCAGCACGTTCCCCTGCCACTGGCCGGACGCACACGTCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215951.2 |
||
| 3UTR GCA 72 bp | GCCAGCCCGGCCGGGATTCAGCACCAGGGTGTGGCATaGTCTCATCTCACCCTACCCCTCACCCCTGTATCT | + |
|
Preference number: 3 (lower is better) Translates to: ASPAGIQHQGVA*SHLTLPLTPVS Trigger: AGATACAGGGGTGAGGGGTAGGGTGAGATGAGAGCATGCCACACCCTGGTGCTGAATCCCGGCCGGGCTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR GCA 72 bp | GTGAGGGGACACAGGCAAACCAGAAATCTTGGTGCCTaGAGGGCCGGGGTGAAGTGTGTTCTGGTGTGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: VRGHRQTRNLGA*RAGVKCVLVWR Trigger: CCTCCACACCAGAACACACTTCACCCCGGCCCTGCAGGCACCAAGATTTCTGGTTTGCCTGTGTCCCCTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR CCA 72 bp | GGACCACGGCAGGTGGAAAGCAGGAGGCGAGGGGGTTaGCCATCTTGCTTTGACATGTTGGGGCATGTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: GPRQVESRRRGG*PSCFDMLGHVK Trigger: CTTAACATGCCCCAACATGTCAAAGCAAGATGGCCAACCCCCTCGCCTCCTGCTTTCCACCTGCCGTGGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR TCA 72 bp | CAGGTCCTTGTCAGGGGCAGTTTGCTGGGTCGTCGGTaGGTGGCCACACCAGTCTCTATAGGAACAAGCCTA | + |
|
Preference number: 3 (lower is better) Translates to: QVLVRGSLLGRR*VATPVSIGTSL Trigger: TAGGCTTGTTCCTATAGAGACTGGTGTGGCCACTCACCGACGACCCAGCAAACTGCCCCTGACAAGGACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR TCA 72 bp | GGCAAACCAGAAATCTTGGTGCCTGCAGGGCCGGGGTaGAGTGTGTTCTGGTGTGGAGGTGATGGATATGGG | + |
|
Preference number: 3 (lower is better) Translates to: GKPEILVPAGPG*SVFWCGGDGYG Trigger: CCCATATCCATCACCTCCACACCAGAACACACTTCACCCCGGCCCTGCAGGCACCAAGATTTCTGGTTTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR CCA 72 bp | GTATACACAGTGATCTTGACAGGCAGGCTGCGGACCTaGCTGATGGGGTTCTCCACCACACAGCTGTACAGG | + |
|
Preference number: 3 (lower is better) Translates to: VYTVILTGRLRT*LMGFSTTQLYR Trigger: CCTGTACAGCTGTGTGGTGGAGAACCCCATCAGCCAGGTCCGCAGCCTGCCTGTCAAGATCACTGTGTATAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215951.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGGGGTTCTCCACCACACAGCTGTACAGGTCGTCATCTTCCATGAGTACTCGGTCATTGAGGAGGGGTTaGCCATCCTTCAGCCACGTG | + |
|
Preference number: 3 (lower is better) Translates to: MGFSTTQLYRSSSSMSTRSLRRG*PSFSHV Trigger: CACGTGGCTGAAGGATGGCAAACCCCTCCTCAATGA...CCGAGTACTCATGGAAGATGACGACCTGTACAGCTGTGTGGTGGAGAACCCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215951.2 |
||
| 3UTR CCA 72 bp | TCTTCCATGAGTACTCGGGTGATGGTGAGCACCTTTTaGTCAGGGGACAGGAGCATTCGGGAGTCATTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SSMSTRVMVSTF*SGDRSIRESLR Trigger: CCTCAATGACTCCCGAATGCTCCTGTCCCCTGACCAAAAGGTGCTCACCATCACCCGAGTACTCATGGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215951.2 |
||
| 3UTR-3UTR CAA 90 bp | ACACAGGCAAACCAGAAATCTTGGTGCCTGCAGGGCCGGGGTGAAGTGTGTTCTACCAAGATCAGCCATTaGTGCAAACTCACACGCGTG | + |
|
Preference number: 3 (lower is better) Translates to: TQANQKSWCLQGRGEVCSTKISH*CKLTRV Trigger: CACGCGTGTGAGTTTGCACAAATGGCTGATCTTGGT...AGAACACACTTCACCCCGGCCCTGCAGGCACCAAGATTTCTGGTTTGCCTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR GCA 72 bp | ATGTGGGATTGGGAGGTGGATGGGAAGTATAAACACTaGCAGGGGGCGCATAGGATCGTCTCACTGGGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: MWDWEVDGKYKH*QGAHRIVSLGK Trigger: TTTACCCAGTGAGACGATCCTATGCGCCCCCTGGCAGTGTTTATACTTCCCATCCACCTCCCAATCCCACAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR GCA 72 bp | CAGGTGGAAAGCAGGAGGCGAGGGGGTTGGCCATCTTaGTTTGACATGTTGGGGCATGTTAAGCTTCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: QVESRRRGGWPS*FDMLGHVKLLS Trigger: AGAAAGAAGCTTAACATGCCCCAACATGTCAAAGCAAGATGGCCAACCCCCTCGCCTCCTGCTTTCCACCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR GCA 72 bp | CATGCAACCGGGTTTAACACCAAGATCAGCCATTTGTaGAAACTCACACGCGTGTGCACCCTAAACGGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: HATGFNTKISHL*KLTRVCTLNGD Trigger: ATCCCCGTTTAGGGTGCACACGCGTGTGAGTTTGCACAAATGGCTGATCTTGGTGTTAAACCCGGTTGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR CCA 72 bp | CTGCCTGCACTATCGCCTACAAGTACTATTTTATGGTaGATGAGGCACCTGGGGAGGTTAGTGGATTGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LPALSPTSTILW*MRHLGRLVDCG Trigger: CCCACAATCCACTAACCTCCCCAGGTGCCTCATCCACCATAAAATAGTACTTGTAGGCGATAGTGCAGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR TCA 72 bp | GCTCCGTGGCTCTGTAGCAGGGTTTTCATCTGGCTCTaGGGAATCCTTATCCTTCAGGATATAGAGTGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: APWLCSRVFIWL*GILILQDIECH Trigger: ATGGCACTCTATATCCTGAAGGATAAGGATTCCTCAGAGCCAGATGAAAACCCTGCTACAGAGCCACGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215951.2 |
||
| 3UTR CCA 72 bp | AATGCACCTGGGGTTCACTCTTATCACCTGGAAAGATaGGGAAGCAGATGTCCAGAAAAGGTCCTTAAGACG | + |
|
Preference number: 3 (lower is better) Translates to: NAPGVHSYHLER*GSRCPEKVLKT Trigger: CGTCTTAAGGACCTTTTCTGGACATCTGCTTCCCCATCTTTCCAGGTGATAAGAGTGAACCCCAGGTGCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR CCA 72 bp | AGGAACAAGCCTACCCACATTCTCATGAACGCAAACTaGAAGGAAGACCAGTATGACACACTTTTGGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: RNKPTHILMNAN*KEDQYDTLLGR Trigger: CCTCCCCAAAAGTGTGTCATACTGGTCTTCCTTCCAGTTTGCGTTCATGAGAATGTGGGTAGGCTTGTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR CCA 72 bp | AACCTGCCTGCACTATCGCCTACAAGTACTATTTTATaGTGGATGAGGCACCTGGGGAGGTTAGTGGATTGT | + |
|
Preference number: 3 (lower is better) Translates to: NLPALSPTSTIL*WMRHLGRLVDC Trigger: ACAATCCACTAACCTCCCCAGGTGCCTCATCCACCATAAAATAGTACTTGTAGGCGATAGTGCAGGCAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR TCA 72 bp | TTGGAAGTTGTTCATGAGATGATGCAGAAGAAAAGATaGAGTTGTACGAGTCGAGGAGGGACAAGAGATTCA | + |
|
Preference number: 3 (lower is better) Translates to: LEVVHEMMQKKR*SCTSRGGTRDS Trigger: TGAATCTCTTGTCCCTCCTCGACTCGTACAACTTCATCTTTTCTTCTGCATCATCTCATGAACAACTTCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS-3UTR TCA 90 bp | GCAAACTGGAAGGAAGACCAGTATGACACACTTTTGGGGAGGCCACTGGAGGCCCGGGTAGCGGCGGGCTaGGCGGATGGGAAGCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: ANWKEDQYDTLLGRPLEARVAAG*ADGKPR Trigger: CCGGGGCTTCCCATCCGCTCAGCCCGCCGCTACCCG...GGCCTCCAGTGGCCTCCCCAAAAGTGTGTCATACTGGTCTTCCTTCCAGTTTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS-3UTR TCA 90 bp | ACTGTCCTGGGTTCTGAGCATCTAGGACCACGGCAGGTGGAAAGCAGGAGGCGAAGCCCTGGAGGCTCTTaGCAGGGCTCCCCTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TVLGSEHLGPRQVESRRRSPGGS*QGSPFS Trigger: AGAGAAAGGGGAGCCCTGTCAAGAGCCTCCAGGGCT...TCGCCTCCTGCTTTCCACCTGCCGTGGTCCTAGATGCTCAGAACCCAGGACAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS-3UTR TCA 90 bp | AGAGATTCAAGGGTCCCTGGGGACATTAGGGGAGAGAGGACAGAACCCACCCACGACGTACTGGGCTGGTaGTGTTCACCCCCTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RDSRVPGDIRGERTEPTHDVLGW*CSPPPG Trigger: CCCTGGAGGGGGTGAACATCACCAGCCCAGTACGTC...GTGGGTGGGTTCTGTCCTCTCTCCCCTAATGTCCCCAGGGACCCTTGAATCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS-3UTR TCA 90 bp | GAACACAGCCAGAGAACACAGCCAGTAAACCCAGCGCACATGCAACCGGGTTTAGCCTGCAGTCCGCAGTaGGCGCGAAGAGCTGCGCGA | + |
|
Preference number: 4 (lower is better) Translates to: EHSQRTQPVNPAHMQPGLACSPQ*ARRAAR Trigger: TCGCGCAGCTCTTCGCGCTCACTGCGGACTGCAGGC...TAAACCCGGTTGCATGTGCGCTGGGTTTACTGGCTGTGTTCTCTGGCTGTGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS-3UTR TCA 90 bp | ATACACAGTGATCTTGACAGGCAGGCTGCGGACCTGGCTGATGGGGTTCTCCACAGCCCTGGAGGCTCTTaGCAGGGCTCCCCTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IHSDLDRQAADLADGVLHSPGGS*QGSPFS Trigger: AGAGAAAGGGGAGCCCTGTCAAGAGCCTCCAGGGCT...GTGGAGAACCCCATCAGCCAGGTCCGCAGCCTGCCTGTCAAGATCACTGTGTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215951.2 |
||
| CDS-3UTR TCA 90 bp | ACACAGGCAAACCAGAAATCTTGGTGCCTGCAGGGCCGGGGTGAAGTGTGTTCTGATCTCCACCTGCCCTaGCTCGTCCTGCTCCCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TQANQKSWCLQGRGEVCSDLHLP*LVLLPD Trigger: ATCCGGGAGCAGGACGAGTCAGGGCAGGTGGAGATC...AGAACACACTTCACCCCGGCCCTGCAGGCACCAAGATTTCTGGTTTGCCTGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS-3UTR CCA 90 bp | ACAGGCCCTGTGTACCCAGGAACCAGCATCAGACTTGTCTTTAGTTTTAGGACAGGCAGGGGAACGTGCTaGGGAGCGCGGGTAGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TGPVYPGTSIRLVFSFRTGRGTC*GARVAA Trigger: CGCCGCTACCCGCGCTCCCCAGCACGTTCCCCTGCC...TGTCCTAAAACTAAAGACAAGTCTGATGCTGGTTCCTGGGTACACAGGGCCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS-3UTR TCA 90 bp | ACTGTCCTGGGTTCTGAGCATCTAGGACCACGGCAGGTGGAAAGCAGGAGGCGAGCATTCGGGAGTCATTaGGGAGGGGTTTGCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: TVLGSEHLGPRQVESRRRAFGSH*GGVCHP Trigger: AGGATGGCAAACCCCTCCTCAATGACTCCCGAATGC...TCGCCTCCTGCTTTCCACCTGCCGTGGTCCTAGATGCTCAGAACCCAGGACAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS-3UTR CCA 90 bp | ACACAGGCAAACCAGAAATCTTGGTGCCTGCAGGGCCGGGGTGAAGTGTGTTCTCGGGCTTGTCGCTGCTaGTGCTACTGTACTGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: TQANQKSWCLQGRGEVCSRACRC*CYCTAR Trigger: CCGTGCAGTACAGTAGCACCAGCAGCGACAAGCCCG...AGAACACACTTCACCCCGGCCCTGCAGGCACCAAGATTTCTGGTTTGCCTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS-3UTR CCA 90 bp | CCTGCCTGCACTATCGCCTACAAGTACTATTTTATGGTGGATGAGGCACCTGGGGGCAGGCTGCGGACCTaGCTGATGGGGTTCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: PACTIAYKYYFMVDEAPGGRLRT*LMGFST Trigger: GGTGGAGAACCCCATCAGCCAGGTCCGCAGCCTGCC...CCCAGGTGCCTCATCCACCATAAAATAGTACTTGTAGGCGATAGTGCAGGCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS-3UTR GCA 90 bp | CAGCCAGAGAACACAGCCAGTAAACCCAGCGCACATGCAACCGGGTTTAACACCCTGGTGCTACTGTACTaGACGGAAAGCAGGGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: QPENTASKPSAHATGFNTLVLLY*TESRAD Trigger: GTCGGCCCTGCTTTCCGTGCAGTACAGTAGCACCAG...GGTGTTAAACCCGGTTGCATGTGCGCTGGGTTTACTGGCTGTGTTCTCTGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS-3UTR GCA 90 bp | ATCTTTGTAATCAGAACAGGCCCTGTGTACCCAGGAACCAGCATCAGACTTGTCAGTGGCAGGGGAACGTaGTGGGGAGCGCGGGTAGCG | + |
|
Preference number: 4 (lower is better) Translates to: IFVIRTGPVYPGTSIRLVSGRGT*WGARVA Trigger: CGCTACCCGCGCTCCCCAGCACGTTCCCCTGCCACT...GACAAGTCTGATGCTGGTTCCTGGGTACACAGGGCCTGTTCTGATTACAAAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR CAA 72 bp | CCACTTCGGGGTAGGGTATCTGTATACACAGTGATCTaGACAGGCAGGCTGCGGACCTGGCTGATGGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLRGRVSVYTVI*TGRLRTWLMGF Trigger: GAACCCCATCAGCCAGGTCCGCAGCCTGCCTGTCAAGATCACTGTGTATACAGATACCCTACCCCGAAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215951.2 |
||
| CDS-3UTR TCA 90 bp | ACACAGGCAAACCAGAAATCTTGGTGCCTGCAGGGCCGGGGTGAAGTGTGTTCTCCAGCTGCAGGTCGCTaGGAAGCAAGGAGCCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: TQANQKSWCLQGRGEVCSPAAGR*EARSHF Trigger: AAAATGGCTCCTTGCTTCTCAGCGACCTGCAGCTGG...AGAACACACTTCACCCCGGCCCTGCAGGCACCAAGATTTCTGGTTTGCCTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS-3UTR GCA 90 bp | AGAGATTCAAGGGTCCCTGGGGACATTAGGGGAGAGAGGACAGAACCCACCCACGAAGCCACTAATACCTaGGGCCTTGAAATGGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RDSRVPGDIRGERTEPTHEATNT*GLEMGT Trigger: TGTGCCCATTTCAAGGCCGCAGGTATTAGTGGCTTC...GTGGGTGGGTTCTGTCCTCTCTCCCCTAATGTCCCCAGGGACCCTTGAATCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS-3UTR CCA 90 bp | ACTGTCCTGGGTTCTGAGCATCTAGGACCACGGCAGGTGGAAAGCAGGAGGCGAGATATAGAGTGCCATTaGGTTCTTCCGCTCCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TVLGSEHLGPRQVESRRRDIECH*VLPLLF Trigger: GAACAGGAGCGGAAGAACCCAATGGCACTCTATATC...TCGCCTCCTGCTTTCCACCTGCCGTGGTCCTAGATGCTCAGAACCCAGGACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS-3UTR CCA 90 bp | CCTGCCTGCACTATCGCCTACAAGTACTATTTTATGGTGGATGAGGCACCTGGGGTGGATCAGACGTACTaGGCTGGTGATGTTCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: PACTIAYKYYFMVDEAPGVDQTY*AGDVHP Trigger: GGGGTGAACATCACCAGCCCAGTACGTCTGATCCAC...CCCAGGTGCCTCATCCACCATAAAATAGTACTTGTAGGCGATAGTGCAGGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR CAA 72 bp | GCACATGCAACCGGGTTTAACACCAAGATCAGCCATTaGTGCAAACTCACACGCGTGTGCACCCTAAACGGG | + |
|
Preference number: 4 (lower is better) Translates to: AHATGFNTKISH*CKLTRVCTLNG Trigger: CCCGTTTAGGGTGCACACGCGTGTGAGTTTGCACAAATGGCTGATCTTGGTGTTAAACCCGGTTGCATGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR CAA 72 bp | ATCTTCCATGAGTACTCGGGTGATGGTGAGCACCTTTaGGTCAGGGGACAGGAGCATTCGGGAGTCATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: IFHEYSGDGEHL*VRGQEHSGVIE Trigger: CTCAATGACTCCCGAATGCTCCTGTCCCCTGACCAAAAGGTGCTCACCATCACCCGAGTACTCATGGAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215951.2 |
||
| CDS-3UTR GCA 90 bp | GAAGCAGATGTCCAGAAAAGGTCCTTAAGACGACATCTTTGTAATCAGAACAGGTGCTCCCGGATTCTCTaGACGCCTGCAGTCCGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EADVQKRSLRRHLCNQNRCSRIL*TPAVRS Trigger: ACTGCGGACTGCAGGCGTGCAGAGAATCCGGGAGCA...CCTGTTCTGATTACAAAGATGTCGTCTTAAGGACCTTTTCTGGACATCTGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR CAA 72 bp | AGGAGGCGAGGGGGTTGGCCATCTTGCTTTGACATGTaGGGGCATGTTAAGCTTCTTTCTCTTTCCACGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RRRGGWPSCFDM*GHVKLLSLSTF Trigger: AAACGTGGAAAGAGAAAGAAGCTTAACATGCCCCAACATGTCAAAGCAAGATGGCCAACCCCCTCGCCTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR CAA 72 bp | TGGAAAGCAGGAGGCGAGGGGGTTGGCCATCTTGCTTaGACATGTTGGGGCATGTTAAGCTTCTTTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: WKAGGEGVGHLA*TCWGMLSFFLF Trigger: AAAGAGAAAGAAGCTTAACATGCCCCAACATGTCAAAGCAAGATGGCCAACCCCCTCGCCTCCTGCTTTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR CAA 72 bp | CTGAGGAATCCTTATCCTTCAGGATATAGAGTGCCATaGGGTTCTTCCGCTCCTGTTCTCCACTTCGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LRNPYPSGYRVP*GSSAPVLHFGV Trigger: TACCCCGAAGTGGAGAACAGGAGCGGAAGAACCCAATGGCACTCTATATCCTGAAGGATAAGGATTCCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215951.2 |
||
| CDS-3UTR GCA 90 bp | GAAGCAGATGTCCAGAAAAGGTCCTTAAGACGACATCTTTGTAATCAGAACAGGCCGACTTCCCCACTGTaGCGTGGATCAGACGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: EADVQKRSLRRHLCNQNRPTSPL*RGSDVL Trigger: CAGTACGTCTGATCCACGGCACAGTGGGGAAGTCGG...CCTGTTCTGATTACAAAGATGTCGTCTTAAGGACCTTTTCTGGACATCTGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS-3UTR GCA 90 bp | CAGCCAGAGAACACAGCCAGTAAACCCAGCGCACATGCAACCGGGTTTAACACCTATTCCAAGGAGTTTTaGTTCTCCAACTTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QPENTASKPSAHATGFNTYSKEF*FSNFLF Trigger: GAAGAGGAAGTTGGAGAAGCAAAACTCCTTGGAATA...GGTGTTAAACCCGGTTGCATGTGCGCTGGGTTTACTGGCTGTGTTCTCTGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS-3UTR CCA 90 bp | ACAGGCCCTGTGTACCCAGGAACCAGCATCAGACTTGTCTTTAGTTTTAGGACATTGGTGCCATTCTCATaGGAGCAGTTGAGGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TGPVYPGTSIRLVFSFRTLVPFS*EQLRVK Trigger: CTTCACCCTCAACTGCTCCCATGAGAATGGCACCAA...TGTCCTAAAACTAAAGACAAGTCTGATGCTGGTTCCTGGGTACACAGGGCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS-3UTR CCA 90 bp | ATCTTTGTAATCAGAACAGGCCCTGTGTACCCAGGAACCAGCATCAGACTTGTCATGGTGAGCACCTTTTaGTCAGGGGACAGGAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: IFVIRTGPVYPGTSIRLVMVSTF*SGDRSI Trigger: AATGCTCCTGTCCCCTGACCAAAAGGTGCTCACCAT...GACAAGTCTGATGCTGGTTCCTGGGTACACAGGGCCTGTTCTGATTACAAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| 3UTR CAA 72 bp | TATCTCAAGGCTGAGCAACAGGTAGTCTTCCAAGTCTaGCTTCTCCTAACCTGCCTGCACTATCGCCTACAA | + |
|
Preference number: 4 (lower is better) Translates to: YLKAEQQVVFQV*LLLTCLHYRLQ Trigger: TTGTAGGCGATAGTGCAGGCAGGTTAGGAGAAGCAAGACTTGGAAGACTACCTGTTGCTCAGCCTTGAGATA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS-3UTR GCA 90 bp | ATCTTTGTAATCAGAACAGGCCCTGTGTACCCAGGAACCAGCATCAGACTTGTCCTTCAGGATATAGAGTaGCATTGGGTTCTTCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IFVIRTGPVYPGTSIRLVLQDIE*HWVLPL Trigger: GAGCGGAAGAACCCAATGGCACTCTATATCCTGAAG...GACAAGTCTGATGCTGGTTCCTGGGTACACAGGGCCTGTTCTGATTACAAAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS-3UTR CCA 90 bp | TCGTTTCATCAAAAGTTTATTGAGCATCCAGGTTGTGCTATGCACTCTGCTAGACTGCACCACGGTCACTaGCTTGTCACGCTTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SFHQKFIEHPGCAMHSARLHHGH*LVTLQL Trigger: CAGCTGAAGCGTGACAAGCCAGTGACCGTGGTGCAG...TCTAGCAGAGTGCATAGCACAACCTGGATGCTCAATAAACTTTTGATGAAACGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS-3UTR GCA 90 bp | GAAGCAGATGTCCAGAAAAGGTCCTTAAGACGACATCTTTGTAATCAGAACAGGTCTGTGCCTATAGACTaGACCACGGTCACTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EADVQKRSLRRHLCNQNRSVPID*TTVTGL Trigger: CAAGCCAGTGACCGTGGTGCAGTCTATAGGCACAGA...CCTGTTCTGATTACAAAGATGTCGTCTTAAGGACCTTTTCTGGACATCTGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS-3UTR TCA 90 bp | GAAGCAGATGTCCAGAAAAGGTCCTTAAGACGACATCTTTGTAATCAGAACAGGAGGCGGTCATCATTCTaGTCCATGTATTCCAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: EADVQKRSLRRHLCNQNRRRSSF*SMYSKE Trigger: CTCCTTGGAATACATGGATCAGAATGATGACCGCCT...CCTGTTCTGATTACAAAGATGTCGTCTTAAGGACCTTTTCTGGACATCTGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS-3UTR CAA 90 bp | CGGCCTGGCGAGCTCGGGGCCCGCGGTGGCGACGTGTGCGTCCGGCCAGTGGCAGAGCCCTGGAGGCTCTaGACAGGGCTCCCCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RPGELGARGGDVCVRPVAEPWRL*TGLPFL Trigger: GAGAAAGGGGAGCCCTGTCAAGAGCCTCCAGGGCTC...TGCCACTGGCCGGACGCACACGTCGCCACCGCGGGCCCCGAGCTCGCCAGGCCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215951.2 |
||
| CDS GCA 90 bp | GCACTGATCTCCACCTGCCCTGACTCGTCCTGCTCCCGGATTCTCTaGACGCCTGCAGTCCGCAGTGAGCGCGAAGAGCTGCGCGAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: ALISTCPDSSCSRIL*TPAVRSEREELRER Trigger: CCGCTCGCGCAGCTCTTCGCGCTCACTGCGGACTGCAGGCGTGCAGAGAATCCGGGAGCAGGACGAGTCAGGGCAGGTGGAGATCAGTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS CCA 90 bp | CTACTGTACTGCACGGAAAGCAGGGCCGACTTCCCCACTGTGCCGTaGATCAGACGTACTGGGCTGGTGATGTTCACCCCCTCCAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LLYCTESRADFPTVP*IRRTGLVMFTPSRG Trigger: CCCCCTGGAGGGGGTGAACATCACCAGCCCAGTACGTCTGATCCACGGCACAGTGGGGAAGTCGGCCCTGCTTTCCGTGCAGTACAGTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS GCA 90 bp | AGCTGCCACTTCACCACGGGCTTGTCGCTGCTGGTGCTACTGTACTaGACGGAAAGCAGGGCCGACTTCCCCACTGTGCCGTGGATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SCHFTTGLSLLVLLY*TESRADFPTVPWIR Trigger: TCTGATCCACGGCACAGTGGGGAAGTCGGCCCTGCTTTCCGTGCAGTACAGTAGCACCAGCAGCGACAAGCCCGTGGTGAAGTGGCAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS GCA 90 bp | CTGGCTTGTCACGCTTCAGCTGCCACTTCACCACGGGCTTGTCGCTaGTGGTGCTACTGTACTGCACGGAAAGCAGGGCCGACTTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LACHASAATSPRACR*WCYCTARKAGPTSP Trigger: TGGGGAAGTCGGCCCTGCTTTCCGTGCAGTACAGTAGCACCAGCAGCGACAAGCCCGTGGTGAAGTGGCAGCTGAAGCGTGACAAGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS CCA 90 bp | GCTTGTCACGCTTCAGCTGCCACTTCACCACGGGCTTGTCGCTGCTaGTGCTACTGTACTGCACGGAAAGCAGGGCCGACTTCCCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: ACHASAATSPRACRC*CYCTARKAGPTSPL Trigger: CAGTGGGGAAGTCGGCCCTGCTTTCCGTGCAGTACAGTAGCACCAGCAGCGACAAGCCCGTGGTGAAGTGGCAGCTGAAGCGTGACAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS GCA 90 bp | GTGCCTATAGACTGCACCACGGTCACTGGCTTGTCACGCTTCAGCTaGCACTTCACCACGGGCTTGTCGCTGCTGGTGCTACTGTACTGC | + |
|
Preference number: 5 (lower is better) Translates to: VPIDCTTVTGLSRFS*HFTTGLSLLVLLYC Trigger: GCAGTACAGTAGCACCAGCAGCGACAAGCCCGTGGTGAAGTGGCAGCTGAAGCGTGACAAGCCAGTGACCGTGGTGCAGTCTATAGGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS CCA 90 bp | CAGAGTGCCAATGACCTCTGTGCCTATAGACTGCACCACGGTCACTaGCTTGTCACGCTTCAGCTGCCACTTCACCACGGGCTTGTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: QSANDLCAYRLHHGH*LVTLQLPLHHGLVA Trigger: AGCGACAAGCCCGTGGTGAAGTGGCAGCTGAAGCGTGACAAGCCAGTGACCGTGGTGCAGTCTATAGGCACAGAGGTCATTGGCACTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS-3UTR CAA 90 bp | ACACAGGCAAACCAGAAATCTTGGTGCCTGCAGGGCCGGGGTGAAGTGTGTTCTACCACGGTCACTGGCTaGTCACGCTTCAGCTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TQANQKSWCLQGRGEVCSTTVTG*SRFSCH Trigger: GTGGCAGCTGAAGCGTGACAAGCCAGTGACCGTGGT...AGAACACACTTCACCCCGGCCCTGCAGGCACCAAGATTTCTGGTTTGCCTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS-3UTR CAA 90 bp | ACTGTCCTGGGTTCTGAGCATCTAGGACCACGGCAGGTGGAAAGCAGGAGGCGATCATTGAGGAGGGGTTaGCCATCCTTCAGCCACGTG | + |
|
Preference number: 5 (lower is better) Translates to: TVLGSEHLGPRQVESRRRSLRRG*PSFSHV Trigger: CACGTGGCTGAAGGATGGCAAACCCCTCCTCAATGA...TCGCCTCCTGCTTTCCACCTGCCGTGGTCCTAGATGCTCAGAACCCAGGACAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS-3UTR CAA 90 bp | AGAGATTCAAGGGTCCCTGGGGACATTAGGGGAGAGAGGACAGAACCCACCCACCTATACACAGTGATCTaGACAGGCAGGCTGCGGACC | + |
|
Preference number: 5 (lower is better) Translates to: RDSRVPGDIRGERTEPTHLYTVI*TGRLRT Trigger: GGTCCGCAGCCTGCCTGTCAAGATCACTGTGTATAG...GTGGGTGGGTTCTGTCCTCTCTCCCCTAATGTCCCCAGGGACCCTTGAATCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS-3UTR CAA 90 bp | GCAAACTGGAAGGAAGACCAGTATGACACACTTTTGGGGAGGCCACTGGAGGCCGATGGTGAGCACCTTTaGGTCAGGGGACAGGAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: ANWKEDQYDTLLGRPLEADGEHL*VRGQEH Trigger: ATGCTCCTGTCCCCTGACCAAAAGGTGCTCACCATC...GGCCTCCAGTGGCCTCCCCAAAAGTGTGTCATACTGGTCTTCCTTCCAGTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS GCA 90 bp | AAGGCCTCACTGAGCTCCAGCACAGTGGTTGAAGCCACTAATACCTaGGGCCTTGAAATGGGCACATCCACGGTGAGGTTGATGGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KASLSSSTVVEATNT*GLEMGTSTVRLMVF Trigger: GAAGACCATCAACCTCACCGTGGATGTGCCCATTTCAAGGCCGCAGGTATTAGTGGCTTCAACCACTGTGCTGGAGCTCAGTGAGGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS CCA 90 bp | GAGCTTCTTCTATACACAGTGATCTTGACAGGCAGGCTGCGGACCTaGCTGATGGGGTTCTCCACCACACAGCTGTACAGGTCGTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: ELLLYTVILTGRLRT*LMGFSTTQLYRSSS Trigger: AGATGACGACCTGTACAGCTGTGTGGTGGAGAACCCCATCAGCCAGGTCCGCAGCCTGCCTGTCAAGATCACTGTGTATAGAAGAAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS-3UTR CAA 90 bp | GAACACAGCCAGAGAACACAGCCAGTAAACCCAGCGCACATGCAACCGGGTTTATTCTCATGGGAGCAGTaGAGGGTGAAGGCCTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: EHSQRTQPVNPAHMQPGLFSWEQ*RVKASL Trigger: CAGTGAGGCCTTCACCCTCAACTGCTCCCATGAGAA...TAAACCCGGTTGCATGTGCGCTGGGTTTACTGGCTGTGTTCTCTGGCTGTGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS-3UTR CAA 90 bp | ACAGGCCCTGTGTACCCAGGAACCAGCATCAGACTTGTCTTTAGTTTTAGGACACACTTCACCACGGGCTaGTCGCTGCTGGTGCTACTG | + |
|
Preference number: 5 (lower is better) Translates to: TGPVYPGTSIRLVFSFRTHFTTG*SLLVLL Trigger: CAGTAGCACCAGCAGCGACAAGCCCGTGGTGAAGTG...TGTCCTAAAACTAAAGACAAGTCTGATGCTGGTTCCTGGGTACACAGGGCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS TCA 90 bp | AAATCTCCACTTCATAGGTTCCCTCATCCGCCAGCTGCAGGTCGCTaGGAAGCAAGGAGCCATTTTCAAAGAGCCGGATACGGTCTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: KSPLHRFPHPPAAGR*EARSHFQRAGYGLD Trigger: ATCGAGACCGTATCCGGCTCTTTGAAAATGGCTCCTTGCTTCTCAGCGACCTGCAGCTGGCGGATGAGGGAACCTATGAAGTGGAGATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS-3UTR CAA 90 bp | ATCTTTGTAATCAGAACAGGCCCTGTGTACCCAGGAACCAGCATCAGACTTGTCACATCCACGGTGAGGTaGATGGTCTTCTCCCCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: IFVIRTGPVYPGTSIRLVTSTVR*MVFSPV Trigger: CACCGGGGAGAAGACCATCAACCTCACCGTGGATGT...GACAAGTCTGATGCTGGTTCCTGGGTACACAGGGCCTGTTCTGATTACAAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS-3UTR CAA 90 bp | ACAGGCCCTGTGTACCCAGGAACCAGCATCAGACTTGTCTTTAGTTTTAGGACAGCTCCAGCACAGTGGTaGAAGCCACTAATACCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: TGPVYPGTSIRLVFSFRTAPAQW*KPLIPA Trigger: CGCAGGTATTAGTGGCTTCAACCACTGTGCTGGAGC...TGTCCTAAAACTAAAGACAAGTCTGATGCTGGTTCCTGGGTACACAGGGCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS-3UTR CAA 90 bp | CTTCTTGTCTTTCATCTATTCATGTGCTGTTTTTACAGCTCTGTCCACTGTCCTGAGCCCTGGAGGCTCTaGACAGGGCTCCCCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLVFHLFMCCFYSSVHCPEPWRL*TGLPFL Trigger: GAGAAAGGGGAGCCCTGTCAAGAGCCTCCAGGGCTC...AGGACAGTGGACAGAGCTGTAAAAACAGCACATGAATAGATGAAAGACAAGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS-3UTR CAA 90 bp | ACAGGCCCTGTGTACCCAGGAACCAGCATCAGACTTGTCTTTAGTTTTAGGACAGGATATAGAGTGCCATaGGGTTCTTCCGCTCCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: TGPVYPGTSIRLVFSFRTGYRVP*GSSAPV Trigger: AACAGGAGCGGAAGAACCCAATGGCACTCTATATCC...TGTCCTAAAACTAAAGACAAGTCTGATGCTGGTTCCTGGGTACACAGGGCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS-3UTR CAA 90 bp | TCGTTTCATCAAAAGTTTATTGAGCATCCAGGTTGTGCTATGCACTCTGCTAGAGTATTCCAAGGAGTTTaGCTTCTCCAACTTCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SFHQKFIEHPGCAMHSARVFQGV*LLQLPL Trigger: AAGAGGAAGTTGGAGAAGCAAAACTCCTTGGAATAC...TCTAGCAGAGTGCATAGCACAACCTGGATGCTCAATAAACTTTTGATGAAACGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS TCA 72 bp | CTGCTCCCGGATTCTCTGCACGCCTGCAGTCCGCAGTaGGCGCGAAGAGCTGCGCGAGCGGCCTGGCGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LLPDSLHACSPQ*ARRAARAAWRA Trigger: AGCTCGCCAGGCCGCTCGCGCAGCTCTTCGCGCTCACTGCGGACTGCAGGCGTGCAGAGAATCCGGGAGCAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS GCA 72 bp | TCCACCTGCCCTGACTCGTCCTGCTCCCGGATTCTCTaGACGCCTGCAGTCCGCAGTGAGCGCGAAGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: STCPDSSCSRIL*TPAVRSEREEL Trigger: CAGCTCTTCGCGCTCACTGCGGACTGCAGGCGTGCAGAGAATCCGGGAGCAGGACGAGTCAGGGCAGGTGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS GCA 72 bp | TTCACCACGGGCTTGTCGCTGCTGGTGCTACTGTACTaGACGGAAAGCAGGGCCGACTTCCCCACTGTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: FTTGLSLLVLLY*TESRADFPTVP Trigger: CGGCACAGTGGGGAAGTCGGCCCTGCTTTCCGTGCAGTACAGTAGCACCAGCAGCGACAAGCCCGTGGTGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS GCA 72 bp | CACGCTTCAGCTGCCACTTCACCACGGGCTTGTCGCTaGTGGTGCTACTGTACTGCACGGAAAGCAGGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: HASAATSPRACR*WCYCTARKAGP Trigger: CGGCCCTGCTTTCCGTGCAGTACAGTAGCACCAGCAGCGACAAGCCCGTGGTGAAGTGGCAGCTGAAGCGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS CCA 72 bp | TGCACGGAAAGCAGGGCCGACTTCCCCACTGTGCCGTaGATCAGACGTACTGGGCTGGTGATGTTCACCCCC | + |
|
Preference number: 6 (lower is better) Translates to: CTESRADFPTVP*IRRTGLVMFTP Trigger: GGGGGTGAACATCACCAGCCCAGTACGTCTGATCCACGGCACAGTGGGGAAGTCGGCCCTGCTTTCCGTGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS CAA 90 bp | ACGGTCACTGGCTTGTCACGCTTCAGCTGCCACTTCACCACGGGCTaGTCGCTGCTGGTGCTACTGTACTGCACGGAAAGCAGGGCCGAC | + |
|
Preference number: 6 (lower is better) Translates to: TVTGLSRFSCHFTTG*SLLVLLYCTESRAD Trigger: GTCGGCCCTGCTTTCCGTGCAGTACAGTAGCACCAGCAGCGACAAGCCCGTGGTGAAGTGGCAGCTGAAGCGTGACAAGCCAGTGACCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS GCA 72 bp | GACTGCACCACGGTCACTGGCTTGTCACGCTTCAGCTaGCACTTCACCACGGGCTTGTCGCTGCTGGTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: DCTTVTGLSRFS*HFTTGLSLLVL Trigger: TAGCACCAGCAGCGACAAGCCCGTGGTGAAGTGGCAGCTGAAGCGTGACAAGCCAGTGACCGTGGTGCAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS CCA 72 bp | GCTTCAGCTGCCACTTCACCACGGGCTTGTCGCTGCTaGTGCTACTGTACTGCACGGAAAGCAGGGCCGACT | + |
|
Preference number: 6 (lower is better) Translates to: ASAATSPRACRC*CYCTARKAGPT Trigger: AGTCGGCCCTGCTTTCCGTGCAGTACAGTAGCACCAGCAGCGACAAGCCCGTGGTGAAGTGGCAGCTGAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS GCA 72 bp | GGCCGCAGAGTGCCAATGACCTCTGTGCCTATAGACTaGACCACGGTCACTGGCTTGTCACGCTTCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GRRVPMTSVPID*TTVTGLSRFSC Trigger: GCAGCTGAAGCGTGACAAGCCAGTGACCGTGGTGCAGTCTATAGGCACAGAGGTCATTGGCACTCTGCGGCC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS CAA 72 bp | GGCTTGTCACGCTTCAGCTGCCACTTCACCACGGGCTaGTCGCTGCTGGTGCTACTGTACTGCACGGAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: GLSRFSCHFTTG*SLLVLLYCTES Trigger: GCTTTCCGTGCAGTACAGTAGCACCAGCAGCGACAAGCCCGTGGTGAAGTGGCAGCTGAAGCGTGACAAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS CAA 90 bp | GTGCCAATGACCTCTGTGCCTATAGACTGCACCACGGTCACTGGCTaGTCACGCTTCAGCTGCCACTTCACCACGGGCTTGTCGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VPMTSVPIDCTTVTG*SRFSCHFTTGLSLL Trigger: CAGCAGCGACAAGCCCGTGGTGAAGTGGCAGCTGAAGCGTGACAAGCCAGTGACCGTGGTGCAGTCTATAGGCACAGAGGTCATTGGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS CAA 72 bp | ACCTCTGTGCCTATAGACTGCACCACGGTCACTGGCTaGTCACGCTTCAGCTGCCACTTCACCACGGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TSVPIDCTTVTG*SRFSCHFTTGL Trigger: CAAGCCCGTGGTGAAGTGGCAGCTGAAGCGTGACAAGCCAGTGACCGTGGTGCAGTCTATAGGCACAGAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS CCA 72 bp | GAAGCAGGTAGACAAAAGGAGAGAGGCGCAGAGCCCTaGAGGCTCTTGACAGGGCTCCCCTTTCTCTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: EAGRQKERGAEP*RLLTGLPFLSS Trigger: TGAAGAGAGAAAGGGGAGCCCTGTCAAGAGCCTCCAGGGCTCTGCGCCTCTCTCCTTTTGTCTACCTGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051839.9 ENSMUST00000215951.2 |
||
| CDS CCA 72 bp | AATGACCTCTGTGCCTATAGACTGCACCACGGTCACTaGCTTGTCACGCTTCAGCTGCCACTTCACCACGGG | + |
|
Preference number: 6 (lower is better) Translates to: NDLCAYRLHHGH*LVTLQLPLHHG Trigger: CCCGTGGTGAAGTGGCAGCTGAAGCGTGACAAGCCAGTGACCGTGGTGCAGTCTATAGGCACAGAGGTCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||
| CDS CCA 72 bp | CTATACACAGTGATCTTGACAGGCAGGCTGCGGACCTaGCTGATGGGGTTCTCCACCACACAGCTGTACAGG | + |
|
Preference number: 6 (lower is better) Translates to: LYTVILTGRLRT*LMGFSTTQLYR Trigger: CCTGTACAGCTGTGTGGTGGAGAACCCCATCAGCCAGGTCCGCAGCCTGCCTGTCAAGATCACTGTGTATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051839.9 |
||