Pregenerated sensors for HENMT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045662Ensembl transcript IDs: ENSMUST00000059946.11, ENSMUST00000098680.9, ENSMUST00000106586.7, ENSMUST00000196400.5, ENSMUST00000196533.2
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAAGGGTTTGGGAGAACTTTCTATCCTGGCCTTTTCAGCCTCCGTaGAGACTGCTCCCAACAGTAGGTGTGGGGCTGGGCAGGAGTCCA | + |
|
Preference number: 1 (lower is better) Translates to: RRVWENFLSWPFQPP*RLLPTVGVGLGRSP Trigger: TGGACTCCTGCCCAGCCCCACACCTACTGTTGGGAGCAGTCTTCACGGAGGCTGAAAAGGCCAGGATAGAAAGTTCTCCCAAACCCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196400.5 |
||
| 3UTR TCA 90 bp | GAAGAATGTATTCTTTTGAAAGATAAGATGAGGGGCCAGGCACTCTaGAAGTGTGCCATAGGCCAACCCGGCCAACACTCATCCAGCCTG | + |
|
Preference number: 1 (lower is better) Translates to: EECILLKDKMRGQAL*KCAIGQPGQHSSSL Trigger: CAGGCTGGATGAGTGTTGGCCGGGTTGGCCTATGGCACACTTTCAGAGTGCCTGGCCCCTCATCTTATCTTTCAAAAGAATACATTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098680.9 |
||
| 3UTR GCA 90 bp | CCGCCATTCTTTGTAAAGACACCTATCTGGGTACAATATCCAACATaGTCAGATCCAGCTGGCGGTGTCCCTACCCCAGTAAACTCCACA | + |
|
Preference number: 1 (lower is better) Translates to: PPFFVKTPIWVQYPT*SDPAGGVPTPVNST Trigger: TGTGGAGTTTACTGGGGTAGGGACACCGCCAGCTGGATCTGAGCATGTTGGATATTGTACCCAGATAGGTGTCTTTACAAAGAATGGCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196400.5 |
||
| 3UTR CCA 90 bp | AAAGACACCTATCTGGGTACAATATCCAACATGCTCAGATCCAGCTaGCGGTGTCCCTACCCCAGTAAACTCCACACGGTAATTGTAGCA | + |
|
Preference number: 1 (lower is better) Translates to: KDTYLGTISNMLRSS*RCPYPSKLHTVIVA Trigger: TGCTACAATTACCGTGTGGAGTTTACTGGGGTAGGGACACCGCCAGCTGGATCTGAGCATGTTGGATATTGTACCCAGATAGGTGTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196400.5 |
||
| 3UTR TCA 90 bp | TCAGTCGGTCCACTTGTATCAGGAGTTCCCCAACCAGAACAAACTTaGGCACCTTCTCCTGCTGTAAACTCGGGTAGGAGGTTGTATAAA | + |
|
Preference number: 1 (lower is better) Translates to: SVGPLVSGVPQPEQT*APSPAVNSGRRLYK Trigger: TTTATACAACCTCCTACCCGAGTTTACAGCAGGAGAAGGTGCTCAAGTTTGTTCTGGTTGGGGAACTCCTGATACAAGTGGACCGACTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196400.5 |
||
| 3UTR CAA 90 bp | CCGGTCCCGCAGCATTCTCTGGTATCTCAGCCTCAGTCGGTCCACTaGTATCAGGAGTTCCCCAACCAGAACAAACTTGAGCACCTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: PVPQHSLVSQPQSVH*YQEFPNQNKLEHLL Trigger: GAGAAGGTGCTCAAGTTTGTTCTGGTTGGGGAACTCCTGATACAAGTGGACCGACTGAGGCTGAGATACCAGAGAATGCTGCGGGACCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196400.5 |
||
| 3UTR-3UTR TCA 90 bp | CGGTCCACTTGTATCAGGAGTTCCCCAACCAGAACAAACTTGAGCACCTTCTCCTGTAAAGCCCAGGTCTaGAACTCCATTCTGCTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: RSTCIRSSPTRTNLSTFSCKAQV*NSILLH Trigger: GTGGAGCAGAATGGAGTTTCAGACCTGGGCTTTACA...GGAGAAGGTGCTCAAGTTTGTTCTGGTTGGGGAACTCCTGATACAAGTGGACCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196400.5 |
||
| 3UTR-3UTR GCA 90 bp | CAACTACTTTTAGTTAAGCCCTTTCTCAGGCAAAGAGCAGTCTATATGTCAGGCTGCTTGCTTAGCATGTaGAAGGGTTCGAGTCCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: QLLLVKPFLRQRAVYMSGCLLSM*KGSSPG Trigger: GCCAGGACTCGAACCCTTGCACATGCTAAGCAAGCA...GCCTGACATATAGACTGCTCTTTGCCTGAGAAAGGGCTTAACTAAAAGTAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAAAGCAACTACTTTTAGTTAAGCCCTTTCTCAGGCAAAGAGCAGTCTATATGTGCTTGCTTAGCATGTaGAAGGGTTCGAGTCCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: RKQLLLVKPFLRQRAVYMCLLSM*KGSSPG Trigger: GCCAGGACTCGAACCCTTGCACATGCTAAGCAAGCA...CATATAGACTGCTCTTTGCCTGAGAAAGGGCTTAACTAAAAGTAGTTGCTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| 3UTR TCA 72 bp | TGGGAGAACTTTCTATCCTGGCCTTTTCAGCCTCCGTaGAGACTGCTCCCAACAGTAGGTGTGGGGCTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: WENFLSWPFQPP*RLLPTVGVGLG Trigger: GCCCAGCCCCACACCTACTGTTGGGAGCAGTCTTCACGGAGGCTGAAAAGGCCAGGATAGAAAGTTCTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196400.5 |
||
| 3UTR TCA 72 bp | CCACTTGTATCAGGAGTTCCCCAACCAGAACAAACTTaGGCACCTTCTCCTGCTGTAAACTCGGGTAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: PLVSGVPQPEQT*APSPAVNSGRR Trigger: CCTCCTACCCGAGTTTACAGCAGGAGAAGGTGCTCAAGTTTGTTCTGGTTGGGGAACTCCTGATACAAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196400.5 |
||
| 3UTR CCA 72 bp | TATCTGGGTACAATATCCAACATGCTCAGATCCAGCTaGCGGTGTCCCTACCCCAGTAAACTCCACACGGTA | + |
|
Preference number: 3 (lower is better) Translates to: YLGTISNMLRSS*RCPYPSKLHTV Trigger: TACCGTGTGGAGTTTACTGGGGTAGGGACACCGCCAGCTGGATCTGAGCATGTTGGATATTGTACCCAGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196400.5 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTCCTTCACAGAAGGGTTTGGGAGAACTTTCTATCCTGGCCTTTTCAGCCTCCAACCAGAACAAACTaGAGCACCTTCTCCTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: SLLHRRVWENFLSWPFQPPTRTN*STFSCC Trigger: ACAGCAGGAGAAGGTGCTCAAGTTTGTTCTGGTTGG...AGGCTGAAAAGGCCAGGATAGAAAGTTCTCCCAAACCCTTCTGTGAAGGAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196400.5 |
||
| 3UTR GCA 72 bp | TTTGTAAAGACACCTATCTGGGTACAATATCCAACATaGTCAGATCCAGCTGGCGGTGTCCCTACCCCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: FVKTPIWVQYPT*SDPAGGVPTPV Trigger: TACTGGGGTAGGGACACCGCCAGCTGGATCTGAGCATGTTGGATATTGTACCCAGATAGGTGTCTTTACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196400.5 |
||
| 3UTR CCA 72 bp | GAGAGCTTCCCGCCATTCTTTGTAAAGACACCTATCTaGGTACAATATCCAACATGCTCAGATCCAGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: ESFPPFFVKTPI*VQYPTCSDPAG Trigger: GCCAGCTGGATCTGAGCATGTTGGATATTGTACCCAGATAGGTGTCTTTACAAAGAATGGCGGGAAGCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196400.5 |
||
| 3UTR-3UTR CAA 90 bp | CGGTCCACTTGTATCAGGAGTTCCCCAACCAGAACAAACTTGAGCACCTTCTCCAACTCGGGTAGGAGGTaGTATAAACAGGTTTATAAA | + |
|
Preference number: 3 (lower is better) Translates to: RSTCIRSSPTRTNLSTFSNSGRR*YKQVYK Trigger: TTTATAAACCTGTTTATACAACCTCCTACCCGAGTT...GGAGAAGGTGCTCAAGTTTGTTCTGGTTGGGGAACTCCTGATACAAGTGGACCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196400.5 |
||
| 3UTR TCA 72 bp | CCAGGTGTGGTGATGCACGATTTTAATCCTGGCACATaGGAAGTAGAGATAGGAGATCTGTATGTGTTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: PGVVMHDFNPGT*EVEIGDLYVFK Trigger: CTTGAACACATACAGATCTCCTATCTCTACTTCTCATGTGCCAGGATTAAAATCGTGCATCACCACACCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098680.9 |
||
| CDS-3UTR CCA 90 bp | CGGTCCACTTGTATCAGGAGTTCCCCAACCAGAACAAACTTGAGCACCTTCTCCGCAGCTTTAGGAGCTTaGCATCTCCACATCCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RSTCIRSSPTRTNLSTFSAALGA*HLHIPG Trigger: ACCTGGGATGTGGAGATGCCAAGCTCCTAAAGCTGC...GGAGAAGGTGCTCAAGTTTGTTCTGGTTGGGGAACTCCTGATACAAGTGGACCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196400.5 |
||
| CDS-3UTR TCA 90 bp | CAACCCGGCCAACACTCATCCAGCCTGAAGGATCTTTCTATGAGGAACCTCAAAGCTGGGGGTACAGAGTaGGACCAGGTTTATAAACGT | + |
|
Preference number: 4 (lower is better) Translates to: QPGQHSSSLKDLSMRNLKAGGTE*DQVYKR Trigger: ACGTTTATAAACCTGGTCTCACTCTGTACCCCCAGC...TTTGAGGTTCCTCATAGAAAGATCCTTCAGGCTGGATGAGTGTTGGCCGGGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098680.9 |
||
| CDS-3UTR TCA 90 bp | AGATCCAGCTGGCGGTGTCCCTACCCCAGTAAACTCCACACGGTAATTGTAGCACAAGCGATGCCCATTTaGATGCAATTTTTCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: RSSWRCPYPSKLHTVIVAQAMPI*MQFFFI Trigger: AATGAAGAAAAATTGCATTCAAATGGGCATCGCTTG...TGCTACAATTACCGTGTGGAGTTTACTGGGGTAGGGACACCGCCAGCTGGATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196400.5 |
||
| CDS-3UTR TCA 90 bp | AGTAGAGATAGGAGATCTGTATGTGTTCAAGGCCAGTCTGGTCTACATAGCAAGTGTAAAGCCCAGGTCTaGAACTCCATTCTGCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SRDRRSVCVQGQSGLHSKCKAQV*NSILLH Trigger: GTGGAGCAGAATGGAGTTTCAGACCTGGGCTTTACA...CTTGCTATGTAGACCAGACTGGCCTTGAACACATACAGATCTCCTATCTCTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098680.9 |
||
| CDS-3UTR CCA 90 bp | CAACTACTTTTAGTTAAGCCCTTTCTCAGGCAAAGAGCAGTCTATATGTCAGGCGGTCGGCAACCTTCTTaGGTTCATGGCGATCCACTA | + |
|
Preference number: 4 (lower is better) Translates to: QLLLVKPFLRQRAVYMSGGRQPS*VHGDPL Trigger: TAGTGGATCGCCATGAACCCAAGAAGGTTGCCGACC...GCCTGACATATAGACTGCTCTTTGCCTGAGAAAGGGCTTAACTAAAAGTAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 |
||
| CDS-3UTR CCA 90 bp | AGCCTGAAGGATCTTTCTATGAGGAACCTCAAAATTAGGTCATTTAGCCAGGTGGGTCGGCAACCTTCTTaGGTTCATGGCGATCCACTA | + |
|
Preference number: 4 (lower is better) Translates to: SLKDLSMRNLKIRSFSQVGRQPS*VHGDPL Trigger: TAGTGGATCGCCATGAACCCAAGAAGGTTGCCGACC...CACCTGGCTAAATGACCTAATTTTGAGGTTCCTCATAGAAAGATCCTTCAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098680.9 |
||
| CDS-3UTR CCA 90 bp | CAACTACTTTTAGTTAAGCCCTTTCTCAGGCAAAGAGCAGTCTATATGTCAGGCGCAGCTTTAGGAGCTTaGCATCTCCACATCCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QLLLVKPFLRQRAVYMSGAALGA*HLHIPG Trigger: ACCTGGGATGTGGAGATGCCAAGCTCCTAAAGCTGC...GCCTGACATATAGACTGCTCTTTGCCTGAGAAAGGGCTTAACTAAAAGTAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| CDS-3UTR CCA 90 bp | AGCCTGAAGGATCTTTCTATGAGGAACCTCAAAATTAGGTCATTTAGCCAGGTGGCAGCTTTAGGAGCTTaGCATCTCCACATCCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLKDLSMRNLKIRSFSQVAALGA*HLHIPG Trigger: ACCTGGGATGTGGAGATGCCAAGCTCCTAAAGCTGC...CACCTGGCTAAATGACCTAATTTTGAGGTTCCTCATAGAAAGATCCTTCAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098680.9 |
||
| CDS-3UTR TCA 90 bp | CAACTACTTTTAGTTAAGCCCTTTCTCAGGCAAAGAGCAGTCTATATGTCAGGCGACAACCATGGCTGGTaGCAGGTATCCAAAAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: QLLLVKPFLRQRAVYMSGDNHGW*QVSKNH Trigger: GTGGTTTTTGGATACCTGTCACCAGCCATGGTTGTC...GCCTGACATATAGACTGCTCTTTGCCTGAGAAAGGGCTTAACTAAAAGTAGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| CDS-3UTR TCA 90 bp | CAACTACTTTTAGTTAAGCCCTTTCTCAGGCAAAGAGCAGTCTATATGTCAGGCTGTAAAGCCCAGGTCTaGAACTCCATTCTGCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QLLLVKPFLRQRAVYMSGCKAQV*NSILLH Trigger: GTGGAGCAGAATGGAGTTTCAGACCTGGGCTTTACA...GCCTGACATATAGACTGCTCTTTGCCTGAGAAAGGGCTTAACTAAAAGTAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| CDS-3UTR TCA 90 bp | CAACCCGGCCAACACTCATCCAGCCTGAAGGATCTTTCTATGAGGAACCTCAAACAAGCGATGCCCATTTaGATGCAATTTTTCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: QPGQHSSSLKDLSMRNLKQAMPI*MQFFFI Trigger: AATGAAGAAAAATTGCATTCAAATGGGCATCGCTTG...TTTGAGGTTCCTCATAGAAAGATCCTTCAGGCTGGATGAGTGTTGGCCGGGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098680.9 |
||
| CDS-3UTR TCA 90 bp | AGAAAGCAACTACTTTTAGTTAAGCCCTTTCTCAGGCAAAGAGCAGTCTATATGTGTAAAGCCCAGGTCTaGAACTCCATTCTGCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RKQLLLVKPFLRQRAVYMCKAQV*NSILLH Trigger: GTGGAGCAGAATGGAGTTTCAGACCTGGGCTTTACA...CATATAGACTGCTCTTTGCCTGAGAAAGGGCTTAACTAAAAGTAGTTGCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| CDS-3UTR GCA 90 bp | CCCGGCCAACACTCATCCAGCCTGAAGGATCTTTCTATGAGGAACCTCAAAATTCAACAAGCAGTTGAATaGATGGGTAGATTTTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PGQHSSSLKDLSMRNLKIQQAVE*MGRFLA Trigger: TGCTAAAAATCTACCCATGCATTCAACTGCTTGTTG...AATTTTGAGGTTCCTCATAGAAAGATCCTTCAGGCTGGATGAGTGTTGGCCGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098680.9 |
||
| CDS-3UTR CCA 90 bp | CAACTACTTTTAGTTAAGCCCTTTCTCAGGCAAAGAGCAGTCTATATGTCAGGCGTTGAATTCAGCATTTaGGGTGCTGATGACAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: QLLLVKPFLRQRAVYMSGVEFSI*GADDNH Trigger: ATGGTTGTCATCAGCACCCCAAATGCTGAATTCAAC...GCCTGACATATAGACTGCTCTTTGCCTGAGAAAGGGCTTAACTAAAAGTAGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGCCTGAAGGATCTTTCTATGAGGAACCTCAAAATTAGGTCATTTAGCCAGGTTGAATTCAGCATTTaGGGTGCTGATGACAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSLKDLSMRNLKIRSFSQVEFSI*GADDNH Trigger: ATGGTTGTCATCAGCACCCCAAATGCTGAATTCAAC...CTGGCTAAATGACCTAATTTTGAGGTTCCTCATAGAAAGATCCTTCAGGCTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098680.9 |
||
| CDS-3UTR TCA 90 bp | ATCTGTCATCGAGATCAGGACCCAATTTGTGTTAAAACTCTCAAACTATTTCTTTGTAAAGCCCAGGTCTaGAACTCCATTCTGCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ICHRDQDPICVKTLKLFLCKAQV*NSILLH Trigger: GTGGAGCAGAATGGAGTTTCAGACCTGGGCTTTACA...AAGAAATAGTTTGAGAGTTTTAACACAAATTGGGTCCTGATCTCGATGACAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| CDS-3UTR CCA 90 bp | CAACTACTTTTAGTTAAGCCCTTTCTCAGGCAAAGAGCAGTCTATATGTCAGGCGTAAAGACACCTATCTaGGTACAATATCCAACATGC | + |
|
Preference number: 4 (lower is better) Translates to: QLLLVKPFLRQRAVYMSGVKTPI*VQYPTC Trigger: GCATGTTGGATATTGTACCCAGATAGGTGTCTTTAC...GCCTGACATATAGACTGCTCTTTGCCTGAGAAAGGGCTTAACTAAAAGTAGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| CDS-3UTR CCA 90 bp | AGCCTGAAGGATCTTTCTATGAGGAACCTCAAAATTAGGTCATTTAGCCAGGTGGTAAAGACACCTATCTaGGTACAATATCCAACATGC | + |
|
Preference number: 4 (lower is better) Translates to: SLKDLSMRNLKIRSFSQVVKTPI*VQYPTC Trigger: GCATGTTGGATATTGTACCCAGATAGGTGTCTTTAC...CACCTGGCTAAATGACCTAATTTTGAGGTTCCTCATAGAAAGATCCTTCAGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098680.9 |
||
| CDS-3UTR CCA 90 bp | AGAAAGCAACTACTTTTAGTTAAGCCCTTTCTCAGGCAAAGAGCAGTCTATATGCTTCACAGAAGGGTTTaGGAGAACTTTCTATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RKQLLLVKPFLRQRAVYMLHRRV*ENFLSW Trigger: CCAGGATAGAAAGTTCTCCCAAACCCTTCTGTGAAG...CATATAGACTGCTCTTTGCCTGAGAAAGGGCTTAACTAAAAGTAGTTGCTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| CDS-3UTR TCA 90 bp | CAACTACTTTTAGTTAAGCCCTTTCTCAGGCAAAGAGCAGTCTATATGTCAGGCCAAGCGATGCCCATTTaGATGCAATTTTTCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: QLLLVKPFLRQRAVYMSGQAMPI*MQFFFI Trigger: AATGAAGAAAAATTGCATTCAAATGGGCATCGCTTG...GCCTGACATATAGACTGCTCTTTGCCTGAGAAAGGGCTTAACTAAAAGTAGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| CDS-3UTR GCA 90 bp | CAACTACTTTTAGTTAAGCCCTTTCTCAGGCAAAGAGCAGTCTATATGTCAGGCCAACAAGCAGTTGAATaGATGGGTAGATTTTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QLLLVKPFLRQRAVYMSGQQAVE*MGRFLA Trigger: TGCTAAAAATCTACCCATGCATTCAACTGCTTGTTG...GCCTGACATATAGACTGCTCTTTGCCTGAGAAAGGGCTTAACTAAAAGTAGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| CDS-3UTR GCA 90 bp | CCGCCATTCTTTGTAAAGACACCTATCTGGGTACAATATCCAACATGCTCAGATCAACAAGCAGTTGAATaGATGGGTAGATTTTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PPFFVKTPIWVQYPTCSDQQAVE*MGRFLA Trigger: TGCTAAAAATCTACCCATGCATTCAACTGCTTGTTG...ATCTGAGCATGTTGGATATTGTACCCAGATAGGTGTCTTTACAAAGAATGGCGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196400.5 |
||
| CDS-3UTR GCA 90 bp | CAACTACTTTTAGTTAAGCCCTTTCTCAGGCAAAGAGCAGTCTATATGTCAGGCTCTGAAACTCCATTCTaGTCCACTCAAATTTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: QLLLVKPFLRQRAVYMSGSETPF*STQIYG Trigger: ACCATAAATTTGAGTGGAGCAGAATGGAGTTTCAGA...GCCTGACATATAGACTGCTCTTTGCCTGAGAAAGGGCTTAACTAAAAGTAGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| CDS-3UTR CCA 90 bp | AGAAAGCAACTACTTTTAGTTAAGCCCTTTCTCAGGCAAAGAGCAGTCTATATGGTAAAGACACCTATCTaGGTACAATATCCAACATGC | + |
|
Preference number: 4 (lower is better) Translates to: RKQLLLVKPFLRQRAVYMVKTPI*VQYPTC Trigger: GCATGTTGGATATTGTACCCAGATAGGTGTCTTTAC...CATATAGACTGCTCTTTGCCTGAGAAAGGGCTTAACTAAAAGTAGTTGCTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| CDS-3UTR CCA 90 bp | ATCTGTCATCGAGATCAGGACCCAATTTGTGTTAAAACTCTCAAACTATTTCTTCTTCACAGAAGGGTTTaGGAGAACTTTCTATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ICHRDQDPICVKTLKLFLLHRRV*ENFLSW Trigger: CCAGGATAGAAAGTTCTCCCAAACCCTTCTGTGAAG...AAGAAATAGTTTGAGAGTTTTAACACAAATTGGGTCCTGATCTCGATGACAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| CDS-3UTR GCA 90 bp | AGAAAGCAACTACTTTTAGTTAAGCCCTTTCTCAGGCAAAGAGCAGTCTATATGCAACAAGCAGTTGAATaGATGGGTAGATTTTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RKQLLLVKPFLRQRAVYMQQAVE*MGRFLA Trigger: TGCTAAAAATCTACCCATGCATTCAACTGCTTGTTG...CATATAGACTGCTCTTTGCCTGAGAAAGGGCTTAACTAAAAGTAGTTGCTTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| CDS-3UTR CCA 90 bp | ATCTGTCATCGAGATCAGGACCCAATTTGTGTTAAAACTCTCAAACTATTTCTTGTTGAATTCAGCATTTaGGGTGCTGATGACAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: ICHRDQDPICVKTLKLFLVEFSI*GADDNH Trigger: ATGGTTGTCATCAGCACCCCAAATGCTGAATTCAAC...AAGAAATAGTTTGAGAGTTTTAACACAAATTGGGTCCTGATCTCGATGACAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| CDS-3UTR CCA 90 bp | ATCTGTCATCGAGATCAGGACCCAATTTGTGTTAAAACTCTCAAACTATTTCTTGTAAAGACACCTATCTaGGTACAATATCCAACATGC | + |
|
Preference number: 4 (lower is better) Translates to: ICHRDQDPICVKTLKLFLVKTPI*VQYPTC Trigger: GCATGTTGGATATTGTACCCAGATAGGTGTCTTTAC...AAGAAATAGTTTGAGAGTTTTAACACAAATTGGGTCCTGATCTCGATGACAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| CDS-3UTR TCA 90 bp | ATCTGTCATCGAGATCAGGACCCAATTTGTGTTAAAACTCTCAAACTATTTCTTCAAGCGATGCCCATTTaGATGCAATTTTTCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: ICHRDQDPICVKTLKLFLQAMPI*MQFFFI Trigger: AATGAAGAAAAATTGCATTCAAATGGGCATCGCTTG...AAGAAATAGTTTGAGAGTTTTAACACAAATTGGGTCCTGATCTCGATGACAGAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| CDS TCA 90 bp | CCACGACTGCGGAGCCATCACTGCTTAAGCAAACCGAGTCAGCAATaGGGGACCGCACCCTGTCCTCATCAGCACACAGGCGGTGCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: PRLRSHHCLSKPSQQ*GTAPCPHQHTGGAV Trigger: AACTGCACCGCCTGTGTGCTGATGAGGACAGGGTGCGGTCCCTCATTGCTGACTCGGTTTGCTTAAGCAGTGATGGCTCCGCAGTCGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| CDS-3UTR CAA 90 bp | TCAGCCTCCGTGAAGACTGCTCCCAACAGTAGGTGTGGGGCTGGGCAGGAGTCCTGCAATTTTTCTTCATaGATATCCACCCCAACAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SASVKTAPNSRCGAGQESCNFSS*ISTPTS Trigger: GCTTGTTGGGGTGGATATCAATGAAGAAAAATTGCA...GGACTCCTGCCCAGCCCCACACCTACTGTTGGGAGCAGTCTTCACGGAGGCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000196400.5 |
||
| CDS CCA 90 bp | CAAGCAGTTGAATGCATGGGTAGATTTTTAGCAGCTTTAGGAGCTTaGCATCTCCACATCCCAGGTCGGCAACCTTCTTGGGTTCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: QAVECMGRFLAALGA*HLHIPGRQPSWVHG Trigger: GCCATGAACCCAAGAAGGTTGCCGACCTGGGATGTGGAGATGCCAAGCTCCTAAAGCTGCTAAAAATCTACCCATGCATTCAACTGCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000098680.9 ENSMUST00000106586.7 |
||
| CDS CCA 90 bp | CAAGCAGTTGAATGCATGGGTAGATTTTTAGCAGCTTTAGGAGCTTaGCATCTCCACATCCCAGGTCGGCAACCGGTATGCTTTCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QAVECMGRFLAALGA*HLHIPGRQPVCFLP Trigger: TGGCAGAAAGCATACCGGTTGCCGACCTGGGATGTGGAGATGCCAAGCTCCTAAAGCTGCTAAAAATCTACCCATGCATTCAACTGCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000196400.5 ENSMUST00000196533.2 |
||
| CDS-3UTR CAA 90 bp | CTGAAAGTGTGCCATAGGCCAACCCGGCCAACACTCATCCAGCCTGAAGGATCTCTAACTTCTTTAAAATaGCCACCAACCACACTATTG | + |
|
Preference number: 5 (lower is better) Translates to: LKVCHRPTRPTLIQPEGSLTSLK*PPTTLL Trigger: CAATAGTGTGGTTGGTGGCAATTTTAAAGAAGTTAG...AGATCCTTCAGGCTGGATGAGTGTTGGCCGGGTTGGCCTATGGCACACTTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098680.9 |
||
| CDS-3UTR CAA 90 bp | AGTAGAGATAGGAGATCTGTATGTGTTCAAGGCCAGTCTGGTCTACATAGCAAGGTAGGAAACAGGGGGTaGAATTCAGCATTTGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SRDRRSVCVQGQSGLHSKVGNRG*NSAFGV Trigger: CACCCCAAATGCTGAATTCAACCCCCTGTTTCCTAC...CTTGCTATGTAGACCAGACTGGCCTTGAACACATACAGATCTCCTATCTCTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098680.9 |
||
| CDS TCA 90 bp | AAATCGAATCCAAGCAAGCGGGAGTCTCTCTCCACAACAGAGCCATaGTACAAGGTGACAGTCAAATCTAGATCTCGGGGTTTTACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: KSNPSKRESLSTTEP*YKVTVKSRSRGFTN Trigger: GTTTGTAAAACCCCGAGATCTAGATTTGACTGTCACCTTGTATCATGGCTCTGTTGTGGAGAGAGACTCCCGCTTGCTTGGATTCGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000059946.11 ENSMUST00000098680.9 ENSMUST00000106586.7 ENSMUST00000196400.5 ENSMUST00000196533.2 |
||
| CDS-3UTR CAA 90 bp | CAACTACTTTTAGTTAAGCCCTTTCTCAGGCAAAGAGCAGTCTATATGTCAGGCGTAGGAAACAGGGGGTaGAATTCAGCATTTGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QLLLVKPFLRQRAVYMSGVGNRG*NSAFGV Trigger: CACCCCAAATGCTGAATTCAACCCCCTGTTTCCTAC...GCCTGACATATAGACTGCTCTTTGCCTGAGAAAGGGCTTAACTAAAAGTAGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| CDS-3UTR CAA 90 bp | CAACTACTTTTAGTTAAGCCCTTTCTCAGGCAAAGAGCAGTCTATATGTCAGGCCCAACCAGAACAAACTaGAGCACCTTCTCCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: QLLLVKPFLRQRAVYMSGPTRTN*STFSCC Trigger: ACAGCAGGAGAAGGTGCTCAAGTTTGTTCTGGTTGG...GCCTGACATATAGACTGCTCTTTGCCTGAGAAAGGGCTTAACTAAAAGTAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| CDS-3UTR CAA 90 bp | CAACTACTTTTAGTTAAGCCCTTTCTCAGGCAAAGAGCAGTCTATATGTCAGGCCCTTCACAGAAGGGTTaGGGAGAACTTTCTATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QLLLVKPFLRQRAVYMSGPSQKG*GELSIL Trigger: CAGGATAGAAAGTTCTCCCAAACCCTTCTGTGAAGG...GCCTGACATATAGACTGCTCTTTGCCTGAGAAAGGGCTTAACTAAAAGTAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| CDS-3UTR CAA 90 bp | ACTCCACACGGTAATTGTAGCAGTTTGCCACGTGTAAAGCCCAGGTCTGAAACTACAAGCGATGCCCATTaGAATGCAATTTTTCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: TPHGNCSSLPRVKPRSETTSDAH*NAIFLH Trigger: ATGAAGAAAAATTGCATTCAAATGGGCATCGCTTGT...AGTTTCAGACCTGGGCTTTACACGTGGCAAACTGCTACAATTACCGTGTGGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196400.5 |
||
| CDS-3UTR CAA 90 bp | AGAAAGCAACTACTTTTAGTTAAGCCCTTTCTCAGGCAAAGAGCAGTCTATATGCCAACCAGAACAAACTaGAGCACCTTCTCCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RKQLLLVKPFLRQRAVYMPTRTN*STFSCC Trigger: ACAGCAGGAGAAGGTGCTCAAGTTTGTTCTGGTTGG...CATATAGACTGCTCTTTGCCTGAGAAAGGGCTTAACTAAAAGTAGTTGCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| CDS-3UTR CAA 90 bp | AGTAGAGATAGGAGATCTGTATGTGTTCAAGGCCAGTCTGGTCTACATAGCAAGTGCAATTTTTCTTCATaGATATCCACCCCAACAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SRDRRSVCVQGQSGLHSKCNFSS*ISTPTS Trigger: GCTTGTTGGGGTGGATATCAATGAAGAAAAATTGCA...CTTGCTATGTAGACCAGACTGGCCTTGAACACATACAGATCTCCTATCTCTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098680.9 |
||
| CDS-3UTR CAA 90 bp | AGAAAGCAACTACTTTTAGTTAAGCCCTTTCTCAGGCAAAGAGCAGTCTATATGCCTTCACAGAAGGGTTaGGGAGAACTTTCTATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RKQLLLVKPFLRQRAVYMPSQKG*GELSIL Trigger: CAGGATAGAAAGTTCTCCCAAACCCTTCTGTGAAGG...CATATAGACTGCTCTTTGCCTGAGAAAGGGCTTAACTAAAAGTAGTTGCTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| CDS TCA 90 bp | GCAACCTTCTTGGGTTCATGGCGATCCACTAAATCTCTAACAAACTaGTACCGTTGTTTGTATAATGGTGGTTTGAACCGAATTACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ATFLGSWRSTKSLTN*YRCLYNGGLNRITF Trigger: GAAGGTAATTCGGTTCAAACCACCATTATACAAACAACGGTATCAGTTTGTTAGAGATTTAGTGGATCGCCATGAACCCAAGAAGGTTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000098680.9 ENSMUST00000106586.7 |
||
| CDS-3UTR CAA 90 bp | CAACTACTTTTAGTTAAGCCCTTTCTCAGGCAAAGAGCAGTCTATATGTCAGGCTGCAATTTTTCTTCATaGATATCCACCCCAACAAGC | + |
|
Preference number: 5 (lower is better) Translates to: QLLLVKPFLRQRAVYMSGCNFSS*ISTPTS Trigger: GCTTGTTGGGGTGGATATCAATGAAGAAAAATTGCA...GCCTGACATATAGACTGCTCTTTGCCTGAGAAAGGGCTTAACTAAAAGTAGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| CDS-3UTR CAA 90 bp | ATCTGTCATCGAGATCAGGACCCAATTTGTGTTAAAACTCTCAAACTATTTCTTGTAGGAAACAGGGGGTaGAATTCAGCATTTGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ICHRDQDPICVKTLKLFLVGNRG*NSAFGV Trigger: CACCCCAAATGCTGAATTCAACCCCCTGTTTCCTAC...AAGAAATAGTTTGAGAGTTTTAACACAAATTGGGTCCTGATCTCGATGACAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| CDS-3UTR CAA 90 bp | ATCTGTCATCGAGATCAGGACCCAATTTGTGTTAAAACTCTCAAACTATTTCTTCCAACCAGAACAAACTaGAGCACCTTCTCCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ICHRDQDPICVKTLKLFLPTRTN*STFSCC Trigger: ACAGCAGGAGAAGGTGCTCAAGTTTGTTCTGGTTGG...AAGAAATAGTTTGAGAGTTTTAACACAAATTGGGTCCTGATCTCGATGACAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| CDS-3UTR CAA 90 bp | CAACTACTTTTAGTTAAGCCCTTTCTCAGGCAAAGAGCAGTCTATATGTCAGGCCTAACTTCTTTAAAATaGCCACCAACCACACTATTG | + |
|
Preference number: 5 (lower is better) Translates to: QLLLVKPFLRQRAVYMSGLTSLK*PPTTLL Trigger: CAATAGTGTGGTTGGTGGCAATTTTAAAGAAGTTAG...GCCTGACATATAGACTGCTCTTTGCCTGAGAAAGGGCTTAACTAAAAGTAGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 |
||
| CDS-3UTR CAA 90 bp | ATGAGAAGTAGAGATAGGAGATCTGTATGTGTTCAAGGCCAGTCTGGTCTACATTTGTATAATGGTGGTTaGAACCGAATTACCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: MRSRDRRSVCVQGQSGLHLYNGG*NRITFS Trigger: AGAGAAGGTAATTCGGTTCAAACCACCATTATACAA...ATGTAGACCAGACTGGCCTTGAACACATACAGATCTCCTATCTCTACTTCTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098680.9 |
||
| CDS-3UTR CAA 90 bp | CAACTACTTTTAGTTAAGCCCTTTCTCAGGCAAAGAGCAGTCTATATGTCAGGCACAAGCGATGCCCATTaGAATGCAATTTTTCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: QLLLVKPFLRQRAVYMSGTSDAH*NAIFLH Trigger: ATGAAGAAAAATTGCATTCAAATGGGCATCGCTTGT...GCCTGACATATAGACTGCTCTTTGCCTGAGAAAGGGCTTAACTAAAAGTAGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| CDS-3UTR CAA 90 bp | ATGAGAAGTAGAGATAGGAGATCTGTATGTGTTCAAGGCCAGTCTGGTCTACATACAAGCGATGCCCATTaGAATGCAATTTTTCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: MRSRDRRSVCVQGQSGLHTSDAH*NAIFLH Trigger: ATGAAGAAAAATTGCATTCAAATGGGCATCGCTTGT...ATGTAGACCAGACTGGCCTTGAACACATACAGATCTCCTATCTCTACTTCTCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098680.9 |
||
| CDS-3UTR CAA 90 bp | CAACTACTTTTAGTTAAGCCCTTTCTCAGGCAAAGAGCAGTCTATATGTCAGGCAACTCGGGTAGGAGGTaGTATAAACAGGTTTATAAA | + |
|
Preference number: 5 (lower is better) Translates to: QLLLVKPFLRQRAVYMSGNSGRR*YKQVYK Trigger: TTTATAAACCTGTTTATACAACCTCCTACCCGAGTT...GCCTGACATATAGACTGCTCTTTGCCTGAGAAAGGGCTTAACTAAAAGTAGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| CDS-3UTR CAA 90 bp | ATCTGTCATCGAGATCAGGACCCAATTTGTGTTAAAACTCTCAAACTATTTCTTCCTTCACAGAAGGGTTaGGGAGAACTTTCTATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ICHRDQDPICVKTLKLFLPSQKG*GELSIL Trigger: CAGGATAGAAAGTTCTCCCAAACCCTTCTGTGAAGG...AAGAAATAGTTTGAGAGTTTTAACACAAATTGGGTCCTGATCTCGATGACAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| CDS-3UTR CAA 90 bp | AGAAAGCAACTACTTTTAGTTAAGCCCTTTCTCAGGCAAAGAGCAGTCTATATGTGCAATTTTTCTTCATaGATATCCACCCCAACAAGC | + |
|
Preference number: 5 (lower is better) Translates to: RKQLLLVKPFLRQRAVYMCNFSS*ISTPTS Trigger: GCTTGTTGGGGTGGATATCAATGAAGAAAAATTGCA...CATATAGACTGCTCTTTGCCTGAGAAAGGGCTTAACTAAAAGTAGTTGCTTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| CDS-3UTR CAA 90 bp | AGAAAGCAACTACTTTTAGTTAAGCCCTTTCTCAGGCAAAGAGCAGTCTATATGCTAACTTCTTTAAAATaGCCACCAACCACACTATTG | + |
|
Preference number: 5 (lower is better) Translates to: RKQLLLVKPFLRQRAVYMLTSLK*PPTTLL Trigger: CAATAGTGTGGTTGGTGGCAATTTTAAAGAAGTTAG...CATATAGACTGCTCTTTGCCTGAGAAAGGGCTTAACTAAAAGTAGTTGCTTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 |
||
| CDS-3UTR CAA 90 bp | ATCTGTCATCGAGATCAGGACCCAATTTGTGTTAAAACTCTCAAACTATTTCTTTGCAATTTTTCTTCATaGATATCCACCCCAACAAGC | + |
|
Preference number: 5 (lower is better) Translates to: ICHRDQDPICVKTLKLFLCNFSS*ISTPTS Trigger: GCTTGTTGGGGTGGATATCAATGAAGAAAAATTGCA...AAGAAATAGTTTGAGAGTTTTAACACAAATTGGGTCCTGATCTCGATGACAGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| CDS-3UTR CAA 90 bp | ATCTGTCATCGAGATCAGGACCCAATTTGTGTTAAAACTCTCAAACTATTTCTTTTGTATAATGGTGGTTaGAACCGAATTACCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ICHRDQDPICVKTLKLFLLYNGG*NRITFS Trigger: AGAGAAGGTAATTCGGTTCAAACCACCATTATACAA...AAGAAATAGTTTGAGAGTTTTAACACAAATTGGGTCCTGATCTCGATGACAGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 |
||
| CDS-3UTR CAA 90 bp | ATCTGTCATCGAGATCAGGACCCAATTTGTGTTAAAACTCTCAAACTATTTCTTACAAGCGATGCCCATTaGAATGCAATTTTTCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: ICHRDQDPICVKTLKLFLTSDAH*NAIFLH Trigger: ATGAAGAAAAATTGCATTCAAATGGGCATCGCTTGT...AAGAAATAGTTTGAGAGTTTTAACACAAATTGGGTCCTGATCTCGATGACAGAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| CDS-3UTR CAA 90 bp | ATCTGTCATCGAGATCAGGACCCAATTTGTGTTAAAACTCTCAAACTATTTCTTAACTCGGGTAGGAGGTaGTATAAACAGGTTTATAAA | + |
|
Preference number: 5 (lower is better) Translates to: ICHRDQDPICVKTLKLFLNSGRR*YKQVYK Trigger: TTTATAAACCTGTTTATACAACCTCCTACCCGAGTT...AAGAAATAGTTTGAGAGTTTTAACACAAATTGGGTCCTGATCTCGATGACAGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| CDS TCA 72 bp | CGGAGCCATCACTGCTTAAGCAAACCGAGTCAGCAATaGGGGACCGCACCCTGTCCTCATCAGCACACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RSHHCLSKPSQQ*GTAPCPHQHTG Trigger: GCCTGTGTGCTGATGAGGACAGGGTGCGGTCCCTCATTGCTGACTCGGTTTGCTTAAGCAGTGATGGCTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| CDS CAA 90 bp | AATTTATGGTCGGCGTCCCTCAGGGTGACTGTAGGAAACAGGGGGTaGAATTCAGCATTTGGGGTGCTGATGACAACCATGGCTGGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: NLWSASLRVTVGNRG*NSAFGVLMTTMAGD Trigger: GTCACCAGCCATGGTTGTCATCAGCACCCCAAATGCTGAATTCAACCCCCTGTTTCCTACAGTCACCCTGAGGGACGCCGACCATAAATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059946.11 ENSMUST00000098680.9 ENSMUST00000106586.7 ENSMUST00000196533.2 |
||
| CDS TCA 72 bp | CCAAGCAAGCGGGAGTCTCTCTCCACAACAGAGCCATaGTACAAGGTGACAGTCAAATCTAGATCTCGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: PSKRESLSTTEP*YKVTVKSRSRG Trigger: ACCCCGAGATCTAGATTTGACTGTCACCTTGTATCATGGCTCTGTTGTGGAGAGAGACTCCCGCTTGCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059946.11 ENSMUST00000098680.9 ENSMUST00000106586.7 ENSMUST00000196400.5 ENSMUST00000196533.2 |
||
| CDS CCA 72 bp | GAATGCATGGGTAGATTTTTAGCAGCTTTAGGAGCTTaGCATCTCCACATCCCAGGTCGGCAACCGGTATGC | + |
|
Preference number: 6 (lower is better) Translates to: ECMGRFLAALGA*HLHIPGRQPVC Trigger: GCATACCGGTTGCCGACCTGGGATGTGGAGATGCCAAGCTCCTAAAGCTGCTAAAAATCTACCCATGCATTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000196400.5 ENSMUST00000196533.2 |
||
| CDS CCA 72 bp | GAATGCATGGGTAGATTTTTAGCAGCTTTAGGAGCTTaGCATCTCCACATCCCAGGTCGGCAACCTTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: ECMGRFLAALGA*HLHIPGRQPSW Trigger: CCAAGAAGGTTGCCGACCTGGGATGTGGAGATGCCAAGCTCCTAAAGCTGCTAAAAATCTACCCATGCATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000098680.9 ENSMUST00000106586.7 |
||
| CDS CAA 72 bp | AGCTTGGCATCTCCACATCCCAGGTCGGCAACCTTCTaGGGTTCATGGCGATCCACTAAATCTCTAACAAAC | + |
|
Preference number: 6 (lower is better) Translates to: SLASPHPRSATF*GSWRSTKSLTN Trigger: GTTTGTTAGAGATTTAGTGGATCGCCATGAACCCAAGAAGGTTGCCGACCTGGGATGTGGAGATGCCAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000098680.9 ENSMUST00000106586.7 |
||
| CDS TCA 72 bp | GGGAGTCTCTCTCCACAACAGAGCCATGATACAAGGTaGCAGTCAAATCTAGATCTCGGGGTTTTACAAACT | + |
|
Preference number: 6 (lower is better) Translates to: GSLSPQQSHDTR*QSNLDLGVLQT Trigger: AGTTTGTAAAACCCCGAGATCTAGATTTGACTGTCACCTTGTATCATGGCTCTGTTGTGGAGAGAGACTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000059946.11 ENSMUST00000098680.9 ENSMUST00000106586.7 ENSMUST00000196400.5 ENSMUST00000196533.2 |
||
| CDS TCA 72 bp | ACAAGCGATGCCCATTTGAATGCAATTTTTCTTCATTaGTATCCACCCCAACAAGCAGTTGAATGCATGGGT | + |
|
Preference number: 6 (lower is better) Translates to: TSDAHLNAIFLH*YPPQQAVECMG Trigger: ACCCATGCATTCAACTGCTTGTTGGGGTGGATATCAATGAAGAAAAATTGCATTCAAATGGGCATCGCTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000059946.11 ENSMUST00000098680.9 ENSMUST00000106586.7 ENSMUST00000196400.5 ENSMUST00000196533.2 |
||
| CDS TCA 72 bp | TTGGGTTCATGGCGATCCACTAAATCTCTAACAAACTaGTACCGTTGTTTGTATAATGGTGGTTTGAACCGA | + |
|
Preference number: 6 (lower is better) Translates to: LGSWRSTKSLTN*YRCLYNGGLNR Trigger: TCGGTTCAAACCACCATTATACAAACAACGGTATCAGTTTGTTAGAGATTTAGTGGATCGCCATGAACCCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059946.11 ENSMUST00000098680.9 ENSMUST00000106586.7 |
||