Pregenerated sensors for HEMGN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028332Ensembl transcript IDs: ENSMUST00000071096.3, ENSMUST00000107764.9
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTTAAAATAGCAATGCAAATTTTAGTGATTGCTGCAGTGTTTCAGTaGAACCACAAGAGATATGTATGCTGTATTGAGCTGGACTGCAGC | + |
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Preference number: 1 (lower is better) Translates to: VKIAMQILVIAAVFQ*NHKRYVCCIELDCS Trigger: GCTGCAGTCCAGCTCAATACAGCATACATATCTCTTGTGGTTTCACTGAAACACTGCAGCAATCACTAAAATTTGCATTGCTATTTTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| 3UTR-3UTR GCA 90 bp | CCCATATACAAATCCACACCCTCAGGTGCTCACACGGCACACACACACACACACCACAAGAGATATGTATaGTGTATTGAGCTGGACTGC | + |
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Preference number: 2 (lower is better) Translates to: PIYKSTPSGAHTAHTHTHHKRYV*CIELDC Trigger: GCAGTCCAGCTCAATACAGCATACATATCTCTTGTG...GTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATATGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| 3UTR-3UTR GCA 90 bp | CCCTCAGGTGCTCACACGGCACACACACACACACACACACACACACACACACACAATTTTAGTGATTGCTaGAGTGTTTCAGTGAAACCA | + |
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Preference number: 2 (lower is better) Translates to: PSGAHTAHTHTHTHTHTHNFSDC*SVSVKP Trigger: TGGTTTCACTGAAACACTGCAGCAATCACTAAAATT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| 3UTR-3UTR GCA 90 bp | CTGTCTTCCCCCATATACAAATCCACACCCTCAGGTGCTCACACGGCACACACAAATTTTAGTGATTGCTaGAGTGTTTCAGTGAAACCA | + |
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Preference number: 2 (lower is better) Translates to: LSSPIYKSTPSGAHTAHTNFSDC*SVSVKP Trigger: TGGTTTCACTGAAACACTGCAGCAATCACTAAAATT...TGTGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATATGGGGGAAGACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| 3UTR-3UTR GCA 90 bp | CACACACACACACACACACACACACACACACACACTATTGTCTATGTGTTAGAGCACAAGAGATATGTATaGTGTATTGAGCTGGACTGC | + |
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Preference number: 2 (lower is better) Translates to: HTHTHTHTHTHTIVYVLEHKRYV*CIELDC Trigger: GCAGTCCAGCTCAATACAGCATACATATCTCTTGTG...CTCTAACACATAGACAATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| 3UTR-3UTR GCA 90 bp | CACACACACACACACACACACACACACACACACACTATTGTCTATGTGTTAGAGGCAAATTTTAGTGATTaGTGCAGTGTTTCAGTGAAA | + |
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Preference number: 2 (lower is better) Translates to: HTHTHTHTHTHTIVYVLEANFSD*CSVSVK Trigger: TTTCACTGAAACACTGCAGCAATCACTAAAATTTGC...CTCTAACACATAGACAATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| 3UTR GCA 72 bp | TCTGTCTTCCCCCATATACAAATCCACACCCTCAGGTaGTCACACGGCACACACACACACACACACACACAC | + |
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Preference number: 3 (lower is better) Translates to: SVFPHIQIHTLR*SHGTHTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATATGGGGGAAGACAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR GCA 90 bp | CCCTCAGGTGCTCACACGGCACACACACACACACACACACACACACACACACACAGCCATTGTGATGTCTaGCTCCCCTGGGCCTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: PSGAHTAHTHTHTHTHTHSHCDV*LPWASA Trigger: AGCTGAGGCCCAGGGGAGGCAGACATCACAATGGCT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR GCA 90 bp | CACCCTCAGGTGCTCACACGGCACACACACACACACACACACACACACACACACAGCCATTGTGATGTCTaGCTCCCCTGGGCCTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: HPQVLTRHTHTHTHTHTHSHCDV*LPWASA Trigger: AGCTGAGGCCCAGGGGAGGCAGACATCACAATGGCT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR GCA 90 bp | CACCCTCAGGTGCTCACACGGCACACACACACACACACACACACACACACACACGTTCTCGCTGTCCTGTaGATCAGCGTCCTGCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: HPQVLTRHTHTHTHTHTHVLAVL*ISVLPL Trigger: CAAGGGCAGGACGCTGATGCACAGGACAGCGAGAAC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR TCA 90 bp | CCCATATACAAATCCACACCCTCAGGTGCTCACACGGCACACACACACACACACGGCTCCTCCCTGTCCTaGCAGGTCTTGATAGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: PIYKSTPSGAHTAHTHTHGSSLS*QVLIER Trigger: CCTCTCTATCAAGACCTGTCAGGACAGGGAGGAGCC...GTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR GCA 90 bp | TTCTGTCTTCCCCCATATACAAATCCACACCCTCAGGTGCTCACACGGCACACATGTGCATCAGCGTCCTaGCCTTGGGCCCCACCTACT | + |
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Preference number: 4 (lower is better) Translates to: FCLPPYTNPHPQVLTRHTCASAS*PWAPPT Trigger: AGTAGGTGGGGCCCAAGGGCAGGACGCTGATGCACA...TGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATATGGGGGAAGACAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR GCA 90 bp | TATACAAATCCACACCCTCAGGTGCTCACACGGCACACACACACACACACACACTGTGCATCAGCGTCCTaGCCTTGGGCCCCACCTACT | + |
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Preference number: 4 (lower is better) Translates to: YTNPHPQVLTRHTHTHTHCASAS*PWAPPT Trigger: AGTAGGTGGGGCCCAAGGGCAGGACGCTGATGCACA...GTGTGTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR CCA 90 bp | CTGTCTTCCCCCATATACAAATCCACACCCTCAGGTGCTCACACGGCACACACAGCCCCACCTACTTTCTaGGCTCCTTCTGGAAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LSSPIYKSTPSGAHTAHTAPPTF*APSGRL Trigger: CAGCCTTCCAGAAGGAGCCCAGAAAGTAGGTGGGGC...TGTGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATATGGGGGAAGACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR CCA 90 bp | TATACAAATCCACACCCTCAGGTGCTCACACGGCACACACACACACACACACACTCAGCGTCCTGCCCTTaGGCCCCACCTACTTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: YTNPHPQVLTRHTHTHTHSASCP*APPTFW Trigger: CCAGAAAGTAGGTGGGGCCCAAGGGCAGGACGCTGA...GTGTGTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR GCA 90 bp | TATACAAATCCACACCCTCAGGTGCTCACACGGCACACACACACACACACACACGTTCTCGCTGTCCTGTaGATCAGCGTCCTGCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: YTNPHPQVLTRHTHTHTHVLAVL*ISVLPL Trigger: CAAGGGCAGGACGCTGATGCACAGGACAGCGAGAAC...GTGTGTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR CCA 90 bp | CTGTCTTCCCCCATATACAAATCCACACCCTCAGGTGCTCACACGGCACACACAGATGTCTGCCTCCCCTaGGCCTCAGCTTTTCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LSSPIYKSTPSGAHTAHTDVCLP*ASAFLF Trigger: GAAGAGAAAAGCTGAGGCCCAGGGGAGGCAGACATC...TGTGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATATGGGGGAAGACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR CCA 90 bp | CACCCTCAGGTGCTCACACGGCACACACACACACACACACACACACACACACACGGCACAGCTGTCTCCTaGCACATGTTAGGAGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: HPQVLTRHTHTHTHTHTHGTAVS*HMLGEN Trigger: ATTCTCTCCTAACATGTGCCAGGAGACAGCTGTGCC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR CCA 90 bp | CCCTCAGGTGCTCACACGGCACACACACACACACACACACACACACACACACACGGCACAGCTGTCTCCTaGCACATGTTAGGAGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: PSGAHTAHTHTHTHTHTHGTAVS*HMLGEN Trigger: ATTCTCTCCTAACATGTGCCAGGAGACAGCTGTGCC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR CCA 90 bp | TATACAAATCCACACCCTCAGGTGCTCACACGGCACACACACACACACACACACGCCCCACCTACTTTCTaGGCTCCTTCTGGAAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: YTNPHPQVLTRHTHTHTHAPPTF*APSGRL Trigger: CAGCCTTCCAGAAGGAGCCCAGAAAGTAGGTGGGGC...GTGTGTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR TCA 90 bp | CACCCTCAGGTGCTCACACGGCACACACACACACACACACACACACACACACACGGAACAGCCATCTCTTaGTGTGTTTTAGGAGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: HPQVLTRHTHTHTHTHTHGTAIS*CVLGER Trigger: CCTCTCTCCTAAAACACATCAAGAGATGGCTGTTCC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR CCA 90 bp | TTCTGTCTTCCCCCATATACAAATCCACACCCTCAGGTGCTCACACGGCACACAGATGTCTGCCTCCCCTaGGCCTCAGCTTTTCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: FCLPPYTNPHPQVLTRHTDVCLP*ASAFLF Trigger: GAAGAGAAAAGCTGAGGCCCAGGGGAGGCAGACATC...TGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATATGGGGGAAGACAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR GCA 90 bp | TATACAAATCCACACCCTCAGGTGCTCACACGGCACACACACACACACACACACCAAGGCTCTGCCTTTTaGTCCACGTTCCCTTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: YTNPHPQVLTRHTHTHTHQGSAF*STFPCL Trigger: GAGACAAGGGAACGTGGAGCAAAAGGCAGAGCCTTG...GTGTGTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR CCA 90 bp | TTCTGTCTTCCCCCATATACAAATCCACACCCTCAGGTGCTCACACGGCACACAAGCACAGGACTTCTGTaGGTGAGCTTCAGGCATCTG | + |
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Preference number: 4 (lower is better) Translates to: FCLPPYTNPHPQVLTRHTSTGLL*VSFRHL Trigger: CAGATGCCTGAAGCTCACCCACAGAAGTCCTGTGCT...TGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATATGGGGGAAGACAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR CCA 90 bp | CCCTCAGGTGCTCACACGGCACACACACACACACACACACACACACACACACACGGCACTTTGGAAGAATaGTTTGGGGACACAGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: PSGAHTAHTHTHTHTHTHGTLEE*FGDTVV Trigger: AACAACTGTGTCCCCAAACCATTCTTCCAAAGTGCC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR CCA 90 bp | CCCTCAGGTGCTCACACGGCACACACACACACACACACACACACACACACACACACAGGGAAAGGCTTTTaGAACAGCCATCTCTTGATG | + |
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Preference number: 4 (lower is better) Translates to: PSGAHTAHTHTHTHTHTHTGKGF*NSHLLM Trigger: CATCAAGAGATGGCTGTTCCAAAAGCCTTTCCCTGT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR GCA 90 bp | TATACAAATCCACACCCTCAGGTGCTCACACGGCACACACACACACACACACACGAGCAGAGCTGTAGATaGCATTTTCTGGGCAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: YTNPHPQVLTRHTHTHTHEQSCR*HFLGRS Trigger: AGACCTGCCCAGAAAATGGCATCTACAGCTCTGCTC...GTGTGTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR GCA 90 bp | CAACCTTTCCCCTGTTCTGTCTTCCCCCATATACAAATCCACACCCTCAGGTGCGAGCAGAGCTGTAGATaGCATTTTCTGGGCAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: QPFPCSVFPHIQIHTLRCEQSCR*HFLGRS Trigger: AGACCTGCCCAGAAAATGGCATCTACAGCTCTGCTC...GCACCTGAGGGTGTGGATTTGTATATGGGGGAAGACAGAACAGGGGAAAGGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR CCA 90 bp | TTCTGTCTTCCCCCATATACAAATCCACACCCTCAGGTGCTCACACGGCACACAGGTCCAGCCATATCTTaGGGCACTTTGGAAGAATGG | + |
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Preference number: 4 (lower is better) Translates to: FCLPPYTNPHPQVLTRHTGPAIS*GTLEEW Trigger: CCATTCTTCCAAAGTGCCCCAAGATATGGCTGGACC...TGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATATGGGGGAAGACAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR CCA 90 bp | CACCCTCAGGTGCTCACACGGCACACACACACACACACACACACACACACACACGGTCTGGCCACATCATaGCACATTTTCAAAGTATGT | + |
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Preference number: 4 (lower is better) Translates to: HPQVLTRHTHTHTHTHTHGLATS*HIFKVC Trigger: ACATACTTTGAAAATGTGCCATGATGTGGCCAGACC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR CCA 90 bp | TTCTGTCTTCCCCCATATACAAATCCACACCCTCAGGTGCTCACACGGCACACATTTCTGGGCTCCTTCTaGAAGGCTGTGTTTAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: FCLPPYTNPHPQVLTRHTFLGSF*KAVFRL Trigger: GAGCCTAAACACAGCCTTCCAGAAGGAGCCCAGAAA...TGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATATGGGGGAAGACAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR TCA 90 bp | TATACAAATCCACACCCTCAGGTGCTCACACGGCACACACACACACACACACACTTCCCTTTCTGTTTGTaGCCAAGGCTCTGCCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: YTNPHPQVLTRHTHTHTHFPFCL*PRLCLL Trigger: CAAAAGGCAGAGCCTTGGTCACAAACAGAAAGGGAA...GTGTGTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR TCA 90 bp | CCCATATACAAATCCACACCCTCAGGTGCTCACACGGCACACACACACACACACTTCAAAGTATGTTCTTaGGGCACAGTTGGTTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: PIYKSTPSGAHTAHTHTHFKVCS*GTVGSW Trigger: CCAGGAACCAACTGTGCCTCAAGAACATACTTTGAA...GTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR TCA 90 bp | TTCTGTCTTCCCCCATATACAAATCCACACCCTCAGGTGCTCACACGGCACACAGGAACAGCCATCTCTTaGTGTGTTTTAGGAGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: FCLPPYTNPHPQVLTRHTGTAIS*CVLGER Trigger: CCTCTCTCCTAAAACACATCAAGAGATGGCTGTTCC...TGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATATGGGGGAAGACAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR TCA 90 bp | CCCATATACAAATCCACACCCTCAGGTGCTCACACGGCACACACACACACACACGGCCCAGGTATTGGTTaGCATGTTTCAGGTGAATAT | + |
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Preference number: 4 (lower is better) Translates to: PIYKSTPSGAHTAHTHTHGPGIG*HVSGEY Trigger: ATATTCACCTGAAACATGTCAACCAATACCTGGGCC...GTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR TCA 90 bp | CTGTCTTCCCCCATATACAAATCCACACCCTCAGGTGCTCACACGGCACACACAGGCCCAGGTATTGGTTaGCATGTTTCAGGTGAATAT | + |
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Preference number: 4 (lower is better) Translates to: LSSPIYKSTPSGAHTAHTGPGIG*HVSGEY Trigger: ATATTCACCTGAAACATGTCAACCAATACCTGGGCC...TGTGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATATGGGGGAAGACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR TCA 90 bp | CACACACACACACACACACACACACACACACACACTATTGTCTATGTGTTAGAGGGCTCCTCCCTGTCCTaGCAGGTCTTGATAGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTIVYVLEGSSLS*QVLIER Trigger: CCTCTCTATCAAGACCTGTCAGGACAGGGAGGAGCC...CTCTAACACATAGACAATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR GCA 90 bp | CACCCTCAGGTGCTCACACGGCACACACACACACACACACACACACACACACACAGAATGTTGAAGTACTaGTATTCCTTGGCATGTGGT | + |
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Preference number: 4 (lower is better) Translates to: HPQVLTRHTHTHTHTHTHRMLKY*YSLACG Trigger: ACCACATGCCAAGGAATAGCAGTACTTCAACATTCT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR CCA 90 bp | CAACCTTTCCCCTGTTCTGTCTTCCCCCATATACAAATCCACACCCTCAGGTGCTTCTTGAGGCACAGTTaGTTCCTGGCACATGTTAGG | + |
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Preference number: 4 (lower is better) Translates to: QPFPCSVFPHIQIHTLRCFLRHS*FLAHVR Trigger: CCTAACATGTGCCAGGAACCAACTGTGCCTCAAGAA...GCACCTGAGGGTGTGGATTTGTATATGGGGGAAGACAGAACAGGGGAAAGGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR CCA 90 bp | CCCATATACAAATCCACACCCTCAGGTGCTCACACGGCACACACACACACACACTTTGGAAGAATGGTTTaGGGACACAGTTGTTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: PIYKSTPSGAHTAHTHTHFGRMV*GHSCFL Trigger: CAGGAAACAACTGTGTCCCCAAACCATTCTTCCAAA...GTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATATGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR CCA 90 bp | TTCTGTCTTCCCCCATATACAAATCCACACCCTCAGGTGCTCACACGGCACACAGGCACTTTGGAAGAATaGTTTGGGGACACAGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: FCLPPYTNPHPQVLTRHTGTLEE*FGDTVV Trigger: AACAACTGTGTCCCCAAACCATTCTTCCAAAGTGCC...TGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATATGGGGGAAGACAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR CCA 90 bp | TTCTGTCTTCCCCCATATACAAATCCACACCCTCAGGTGCTCACACGGCACACATATCTTGGGGCACTTTaGAAGAATGGTTTGGGGACA | + |
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Preference number: 4 (lower is better) Translates to: FCLPPYTNPHPQVLTRHTYLGAL*KNGLGT Trigger: TGTCCCCAAACCATTCTTCCAAAGTGCCCCAAGATA...TGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATATGGGGGAAGACAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR CCA 90 bp | CCCATATACAAATCCACACCCTCAGGTGCTCACACGGCACACACACACACACACGGTTCAACTGCTTCTTaGTGTGTCTTTGTAGAAACG | + |
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Preference number: 4 (lower is better) Translates to: PIYKSTPSGAHTAHTHTHGSTAS*CVFVET Trigger: CGTTTCTACAAAGACACACCAAGAAGCAGTTGAACC...GTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATATGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR TCA 90 bp | TTCTGTCTTCCCCCATATACAAATCCACACCCTCAGGTGCTCACACGGCACACATTGTTCAGGCTCAGGTaGTTCTTGGATTGTTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FCLPPYTNPHPQVLTRHTLFRLR*FLDCFL Trigger: CAGAAAACAATCCAAGAATCACCTGAGCCTGAACAA...TGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATATGGGGGAAGACAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR GCA 90 bp | CTGTCTTCCCCCATATACAAATCCACACCCTCAGGTGCTCACACGGCACACACATTCCGGATCTTGATCTaGTTTGTTTTCTTCCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LSSPIYKSTPSGAHTAHTFRILI*FVFFLH Trigger: ATGGAGGAAGAAAACAAAGCAGATCAAGATCCGGAA...TGTGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATATGGGGGAAGACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR GCA 90 bp | CAACCTTTCCCCTGTTCTGTCTTCCCCCATATACAAATCCACACCCTCAGGTGCTTCCGGATCTTGATCTaGTTTGTTTTCTTCCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QPFPCSVFPHIQIHTLRCFRILI*FVFFLH Trigger: ATGGAGGAAGAAAACAAAGCAGATCAAGATCCGGAA...GCACCTGAGGGTGTGGATTTGTATATGGGGGAAGACAGAACAGGGGAAAGGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CCA 90 bp | CACACACACACACACACACACACACACACACACACTATTGTCTATGTGTTAGAGGGTCCAGCCATATCTTaGGGCACTTTGGAAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTIVYVLEGPAIS*GTLEEW Trigger: CCATTCTTCCAAAGTGCCCCAAGATATGGCTGGACC...CTCTAACACATAGACAATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CCA 90 bp | AATTGCTATCTTCTCCTCAGAACTACCAAATATATGTTTCCTCTTAGAGGGGAATCAGCGTCCTGCCCTTaGGCCCCACCTACTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NCYLLLRTTKYMFPLRGESASCP*APPTFW Trigger: CCAGAAAGTAGGTGGGGCCCAAGGGCAGGACGCTGA...TTCCCCTCTAAGAGGAAACATATATTTGGTAGTTCTGAGGAGAAGATAGCAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR GCA 90 bp | TATACAAATCCACACCCTCAGGTGCTCACACGGCACACACACACACACACACACTTTCTTGACATTGAATaGTTTCTTGGTGTGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: YTNPHPQVLTRHTHTHTHFLDIE*FLGVLQ Trigger: CTGAAGCACACCAAGAAAGCATTCAATGTCAAGAAA...GTGTGTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CCA 90 bp | CACACACACACACACACACACACACACACACACACTATTGTCTATGTGTTAGAGAGTACTGCTATTCCTTaGCATGTGGTAGGAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTIVYVLESTAIP*HVVGER Trigger: CCTCTCTCCTACCACATGCCAAGGAATAGCAGTACT...CTCTAACACATAGACAATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CCA 90 bp | ACACACACACACACACACACACACACACACTATTGTCTATGTGTTAGAGCCTTAGGCACAGTTGGTTCCTaGCACATGTTAGGAGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTHYCLCVRALGTVGS*HMLGER Trigger: TCTCTCTCCTAACATGTGCCAGGAACCAACTGTGCC...TAAGGCTCTAACACATAGACAATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR TCA 90 bp | CACACACACACACACACACACACACACACACACACTATTGTCTATGTGTTAGAGGGAGAGAGGTGTGTTTaGGAATGGTTCTGTATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTIVYVLEGERCV*EWFCIA Trigger: AGCAATACAGAACCATTCTCAAACACACCTCTCTCC...CTCTAACACATAGACAATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR TCA 90 bp | CACACACACACACACACACACACACACACACACACTATTGTCTATGTGTTAGAGTTCAAAGTATGTTCTTaGGGCACAGTTGGTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTIVYVLEFKVCS*GTVGSW Trigger: CCAGGAACCAACTGTGCCTCAAGAACATACTTTGAA...CTCTAACACATAGACAATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR TCA 90 bp | ACACACACACACACACACACACACACACACTATTGTCTATGTGTTAGAGCCTTAGGAGAGAGGTGTGTTTaGGAATGGTTCTGTATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTHYCLCVRALGERCV*EWFCIA Trigger: AGCAATACAGAACCATTCTCAAACACACCTCTCTCC...TAAGGCTCTAACACATAGACAATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR GCA 90 bp | CACACACACACACACACACACACACACACACACACTATTGTCTATGTGTTAGAGAGCCATTTCTTCAAGTaGTTTGGGAGGATAGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTIVYVLESHFFK*FGRIGL Trigger: CAAACCTATCCTCCCAAAGCACTTGAAGAAATGGCT...CTCTAACACATAGACAATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CCA 90 bp | ATCTTCTCCTCAGAACTACCAAATATATGTTTCCTCTTAGAGGGGAAAATCAACAGCACAGGACTTCTGTaGGTGAGCTTCAGGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: IFSSELPNICFLLEGKINSTGLL*VSFRHL Trigger: CAGATGCCTGAAGCTCACCCACAGAAGTCCTGTGCT...GTTGATTTTCCCCTCTAAGAGGAAACATATATTTGGTAGTTCTGAGGAGAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CCA 90 bp | ACACACACACACACACACACACACACACACTATTGTCTATGTGTTAGAGCCTTATATCTTGGGGCACTTTaGAAGAATGGTTTGGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTHYCLCVRALYLGAL*KNGLGT Trigger: TGTCCCCAAACCATTCTTCCAAAGTGCCCCAAGATA...TAAGGCTCTAACACATAGACAATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR TCA 90 bp | ACACACACACACACACACACACACACACACTATTGTCTATGTGTTAGAGCCTTATTGTTCAGGCTCAGGTaGTTCTTGGATTGTTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTHYCLCVRALLFRLR*FLDCFL Trigger: CAGAAAACAATCCAAGAATCACCTGAGCCTGAACAA...TAAGGCTCTAACACATAGACAATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CCA 90 bp | ACACACACACACACACACACACACACACACTATTGTCTATGTGTTAGAGCCTTATTTGGAAGAATGGTTTaGGGACACAGTTGTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTHYCLCVRALFGRMV*GHSCFL Trigger: CAGGAAACAACTGTGTCCCCAAACCATTCTTCCAAA...TAAGGCTCTAACACATAGACAATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CCA 90 bp | AATTGCTATCTTCTCCTCAGAACTACCAAATATATGTTTCCTCTTAGAGGGGAATTTCTGGGCTCCTTCTaGAAGGCTGTGTTTAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NCYLLLRTTKYMFPLRGEFLGSF*KAVFRL Trigger: GAGCCTAAACACAGCCTTCCAGAAGGAGCCCAGAAA...TTCCCCTCTAAGAGGAAACATATATTTGGTAGTTCTGAGGAGAAGATAGCAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR TCA 90 bp | AATTGCTATCTTCTCCTCAGAACTACCAAATATATGTTTCCTCTTAGAGGGGAATTCCCTTTCTGTTTGTaGCCAAGGCTCTGCCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NCYLLLRTTKYMFPLRGEFPFCL*PRLCLL Trigger: CAAAAGGCAGAGCCTTGGTCACAAACAGAAAGGGAA...TTCCCCTCTAAGAGGAAACATATATTTGGTAGTTCTGAGGAGAAGATAGCAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR TCA 90 bp | CACACACACACACACACACACACACACACACACACTATTGTCTATGTGTTAGAGTCTTGGATTGTTTTCTaGGAAGAAACTATAGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTIVYVLESWIVF*EETIGT Trigger: TGTGCCTATAGTTTCTTCTCAGAAAACAATCCAAGA...CTCTAACACATAGACAATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR TCA 90 bp | AATTGCTATCTTCTCCTCAGAACTACCAAATATATGTTTCCTCTTAGAGGGGAAGGAGCTTCCGGATCTTaGTCTGCTTTGTTTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NCYLLLRTTKYMFPLRGEGASGS*SALFSS Trigger: GGAAGAAAACAAAGCAGATCAAGATCCGGAAGCTCC...TTCCCCTCTAAGAGGAAACATATATTTGGTAGTTCTGAGGAGAAGATAGCAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR GCA 90 bp | ACACACACACACACACACACACACACACACTATTGTCTATGTGTTAGAGCCTTAAGAATGTTGAAGTACTaGTATTCCTTGGCATGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTHYCLCVRALRMLKY*YSLACG Trigger: ACCACATGCCAAGGAATAGCAGTACTTCAACATTCT...TAAGGCTCTAACACATAGACAATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CCA 90 bp | ATCTTCTCCTCAGAACTACCAAATATATGTTTCCTCTTAGAGGGGAAAATCAACTTCTTGAGGCACAGTTaGTTCCTGGCACATGTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: IFSSELPNICFLLEGKINFLRHS*FLAHVR Trigger: CCTAACATGTGCCAGGAACCAACTGTGCCTCAAGAA...GTTGATTTTCCCCTCTAAGAGGAAACATATATTTGGTAGTTCTGAGGAGAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR TCA 90 bp | ACACACACACACACACACACACACACACACTATTGTCTATGTGTTAGAGCCTTAATTTTAGGAGAATGTTaGAGTACTGCTATTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTHYCLCVRALILGEC*STAIPW Trigger: CCAAGGAATAGCAGTACTTCAACATTCTCCTAAAAT...TAAGGCTCTAACACATAGACAATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR GCA 90 bp | ACACACACACACACACACACACACACACACTATTGTCTATGTGTTAGAGCCTTATTTCTTGACATTGAATaGTTTCTTGGTGTGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTHYCLCVRALFLDIE*FLGVLQ Trigger: CTGAAGCACACCAAGAAAGCATTCAATGTCAAGAAA...TAAGGCTCTAACACATAGACAATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CCA 90 bp | ATCTTCTCCTCAGAACTACCAAATATATGTTTCCTCTTAGAGGGGAAAATCAACACAGGGAAAGGCTTTTaGAACAGCCATCTCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: IFSSELPNICFLLEGKINTGKGF*NSHLLM Trigger: CATCAAGAGATGGCTGTTCCAAAAGCCTTTCCCTGT...GTTGATTTTCCCCTCTAAGAGGAAACATATATTTGGTAGTTCTGAGGAGAAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR GCA 90 bp | ATCTTCTCCTCAGAACTACCAAATATATGTTTCCTCTTAGAGGGGAAAATCAACAGCCATTTCTTCAAGTaGTTTGGGAGGATAGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: IFSSELPNICFLLEGKINSHFFK*FGRIGL Trigger: CAAACCTATCCTCCCAAAGCACTTGAAGAAATGGCT...GTTGATTTTCCCCTCTAAGAGGAAACATATATTTGGTAGTTCTGAGGAGAAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CCA 90 bp | AATTGCTATCTTCTCCTCAGAACTACCAAATATATGTTTCCTCTTAGAGGGGAAGGTCTGGCCACATCATaGCACATTTTCAAAGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: NCYLLLRTTKYMFPLRGEGLATS*HIFKVC Trigger: ACATACTTTGAAAATGTGCCATGATGTGGCCAGACC...TTCCCCTCTAAGAGGAAACATATATTTGGTAGTTCTGAGGAGAAGATAGCAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CCA 90 bp | AATTGCTATCTTCTCCTCAGAACTACCAAATATATGTTTCCTCTTAGAGGGGAAGGTTCAACTGCTTCTTaGTGTGTCTTTGTAGAAACG | + |
|
Preference number: 4 (lower is better) Translates to: NCYLLLRTTKYMFPLRGEGSTAS*CVFVET Trigger: CGTTTCTACAAAGACACACCAAGAAGCAGTTGAACC...TTCCCCTCTAAGAGGAAACATATATTTGGTAGTTCTGAGGAGAAGATAGCAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR TCA 90 bp | AATTGCTATCTTCTCCTCAGAACTACCAAATATATGTTTCCTCTTAGAGGGGAATCTTGGATTGTTTTCTaGGAAGAAACTATAGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: NCYLLLRTTKYMFPLRGESWIVF*EETIGT Trigger: TGTGCCTATAGTTTCTTCTCAGAAAACAATCCAAGA...TTCCCCTCTAAGAGGAAACATATATTTGGTAGTTCTGAGGAGAAGATAGCAATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CAA 90 bp | CACCCTCAGGTGCTCACACGGCACACACACACACACACACACACACACACACACATTGGGGGAGGGCTTTaGGGGCGCATCCTTCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: HPQVLTRHTHTHTHTHTHIGGGL*GRILPG Trigger: GCCTGGAAGGATGCGCCCCAAAAGCCCTCCCCCAAT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CAA 90 bp | CCCTCAGGTGCTCACACGGCACACACACACACACACACACACACACACACACACAGGGGAGGGCTTCAGTaGCAGAGTTCCCAGGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PSGAHTAHTHTHTHTHTHRGGLQ*QSSQGA Trigger: AGCACCCTGGGAACTCTGCAACTGAAGCCCTCCCCT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CAA 90 bp | CCCTCAGGTGCTCACACGGCACACACACACACACACACACACACACACACACACATCAGCGTCCTGCCCTaGGGCCCCACCTACTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PSGAHTAHTHTHTHTHTHISVLP*GPTYFL Trigger: CAGAAAGTAGGTGGGGCCCAAGGGCAGGACGCTGAT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS CCA 90 bp | ATCAGCGTCCTGCCCTTGGGCCCCACCTACTTTCTGGGCTCCTTCTaGAAGGCTGTGTTTAGGCTCCTCCCTGTCCTGACAGGTCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: ISVLPLGPTYFLGSF*KAVFRLLPVLTGLD Trigger: ATCAAGACCTGTCAGGACAGGGAGGAGCCTAAACACAGCCTTCCAGAAGGAGCCCAGAAAGTAGGTGGGGCCCAAGGGCAGGACGCTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS CCA 90 bp | AAAGCACCAGCGTTCTCGCTGTCCTGTGCATCAGCGTCCTGCCCTTaGGCCCCACCTACTTTCTGGGCTCCTTCTGGAAGGCTGTGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: KAPAFSLSCASASCP*APPTFWAPSGRLCL Trigger: TAAACACAGCCTTCCAGAAGGAGCCCAGAAAGTAGGTGGGGCCCAAGGGCAGGACGCTGATGCACAGGACAGCGAGAACGCTGGTGCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS GCA 90 bp | TTCTGTAAAATCTTGAGAGAAAGCACCAGCGTTCTCGCTGTCCTGTaGATCAGCGTCCTGCCCTTGGGCCCCACCTACTTTCTGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FCKILRESTSVLAVL*ISVLPLGPTYFLGS Trigger: GGAGCCCAGAAAGTAGGTGGGGCCCAAGGGCAGGACGCTGATGCACAGGACAGCGAGAACGCTGGTGCTTTCTCTCAAGATTTTACAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CAA 90 bp | TTCTGTCTTCCCCCATATACAAATCCACACCCTCAGGTGCTCACACGGCACACACTGCAGGCACAGCTTTaGTGGGGGATGGGACCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: FCLPPYTNPHPQVLTRHTLQAQL*WGMGPR Trigger: CCTTGGTCCCATCCCCCACAAAAGCTGTGCCTGCAG...TGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATATGGGGGAAGACAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS TCA 90 bp | TTCTGGGCTCCTTCTGGAAGGCTGTGTTTAGGCTCCTCCCTGTCCTaGCAGGTCTTGATAGAGAGGTCTTCAGGCCCCGACATTTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: FWAPSGRLCLGSSLS*QVLIERSSGPDISW Trigger: CCATGAAATGTCGGGGCCTGAAGACCTCTCTATCAAGACCTGTCAGGACAGGGAGGAGCCTAAACACAGCCTTCCAGAAGGAGCCCAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CAA 90 bp | CTGTCTTCCCCCATATACAAATCCACACCCTCAGGTGCTCACACGGCACACACAGGTCTCTTGAGAACCTaGTGGGCTTGCTGGAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSSPIYKSTPSGAHTAHTGLLRT*WACWSF Trigger: GAAGCTCCAGCAAGCCCACAAGGTTCTCAAGAGACC...TGTGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATATGGGGGAAGACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS GCA 90 bp | GGACACAGTTGTTTCCTGGCACATTTTAGGAGAGAGTGGCTCGGCTaGAGCCATTTCTTCAAGTGCTTTGGGAGGATAGGTTTGGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GHSCFLAHFRREWLG*SHFFKCFGRIGLGH Trigger: GTGCCCCAAACCTATCCTCCCAAAGCACTTGAAGAAATGGCTGCAGCCGAGCCACTCTCTCCTAAAATGTGCCAGGAAACAACTGTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS CCA 90 bp | CCTCAGTTGTTCTCTGTTTCTCAGACTCCAAGATCCAATGATGTCTaGAGCACAGGACTTCTGTGGGTGAGCTTCAGGCATCTGGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PQLFSVSQTPRSNDV*STGLLWVSFRHLGE Trigger: CTCCCCCAGATGCCTGAAGCTCACCCACAGAAGTCCTGTGCTCCAGACATCATTGGATCTTGGAGTCTGAGAAACAGAGAACAACTGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CAA 90 bp | CACACACACACACACACACACACACACACACACACTATTGTCTATGTGTTAGAGATTGGGGGAGGGCTTTaGGGGCGCATCCTTCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHTHTHTHTIVYVLEIGGGL*GRILPG Trigger: GCCTGGAAGGATGCGCCCCAAAAGCCCTCCCCCAAT...CTCTAACACATAGACAATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CAA 90 bp | CCCATATACAAATCCACACCCTCAGGTGCTCACACGGCACACACACACACACACTCTCAGGCCCAGGTATaGGTTGACATGTTTCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PIYKSTPSGAHTAHTHTHSQAQV*VDMFQV Trigger: CACCTGAAACATGTCAACCAATACCTGGGCCTGAGA...GTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATATGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CAA 90 bp | CACCCTCAGGTGCTCACACGGCACACACACACACACACACACACACACACACACACATTGAATGCTTTCTaGGTGTGCTTCAGAACACTG | + |
|
Preference number: 5 (lower is better) Translates to: HPQVLTRHTHTHTHTHTHTLNAF*VCFRTL Trigger: CAGTGTTCTGAAGCACACCAAGAAAGCATTCAATGT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CAA 90 bp | CCCATATACAAATCCACACCCTCAGGTGCTCACACGGCACACACACACACACACATATCTTGGGGCACTTaGGAAGAATGGTTTGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PIYKSTPSGAHTAHTHTHISWGT*EEWFGD Trigger: GTCCCCAAACCATTCTTCCAAAGTGCCCCAAGATAT...GTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATATGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CAA 90 bp | CTGTCTTCCCCCATATACAAATCCACACCCTCAGGTGCTCACACGGCACACACAATATCTTGGGGCACTTaGGAAGAATGGTTTGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LSSPIYKSTPSGAHTAHTISWGT*EEWFGD Trigger: GTCCCCAAACCATTCTTCCAAAGTGCCCCAAGATAT...TGTGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATATGGGGGAAGACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CAA 90 bp | CTGTCTTCCCCCATATACAAATCCACACCCTCAGGTGCTCACACGGCACACACACACAGGGAAAGGCTTTaGGAACAGCCATCTCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LSSPIYKSTPSGAHTAHTHRERL*EQPSLD Trigger: ATCAAGAGATGGCTGTTCCAAAAGCCTTTCCCTGTG...TGTGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATATGGGGGAAGACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CAA 90 bp | CCCATATACAAATCCACACCCTCAGGTGCTCACACGGCACACACACACACACACCACAGGGAAAGGCTTTaGGAACAGCCATCTCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: PIYKSTPSGAHTAHTHTHHRERL*EQPSLD Trigger: ATCAAGAGATGGCTGTTCCAAAAGCCTTTCCCTGTG...GTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS CCA 90 bp | ATGGTTTGGGGACACAGTTGTTTCCTGGCACATTTTAGGAGAGAGTaGCTCGGCTGCAGCCATTTCTTCAAGTGCTTTGGGAGGATAGGT | + |
|
Preference number: 5 (lower is better) Translates to: MVWGHSCFLAHFRRE*LGCSHFFKCFGRIG Trigger: ACCTATCCTCCCAAAGCACTTGAAGAAATGGCTGCAGCCGAGCCACTCTCTCCTAAAATGTGCCAGGAAACAACTGTGTCCCCAAACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CAA 90 bp | CCCATATACAAATCCACACCCTCAGGTGCTCACACGGCACACACACACACACACAGATACCAATACCTCTaGCACCCTTTCCCTTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PIYKSTPSGAHTAHTHTHRYQYL*HPFPFC Trigger: ACAGAAAGGGAAAGGGTGCAAGAGGTATTGGTATCT...GTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CAA 90 bp | ACACACACACACACACACACACACACACACTATTGTCTATGTGTTAGAGCCTTACTGCAGGCACAGCTTTaGTGGGGGATGGGACCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: THTHTHTHTHYCLCVRALLQAQL*WGMGPR Trigger: CCTTGGTCCCATCCCCCACAAAAGCTGTGCCTGCAG...TAAGGCTCTAACACATAGACAATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CAA 90 bp | TATACAAATCCACACCCTCAGGTGCTCACACGGCACACACACACACACACACACAAGTACTGCTATTCCTaGGCATGTGGTAGGAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: YTNPHPQVLTRHTHTHTHKYCYS*ACGRRE Trigger: CTCTCTCCTACCACATGCCAAGGAATAGCAGTACTT...GTGTGTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CAA 90 bp | ACACACACACACACACACACACACACACACTATTGTCTATGTGTTAGAGCCTTAATCAGCGTCCTGCCCTaGGGCCCCACCTACTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: THTHTHTHTHYCLCVRALISVLP*GPTYFL Trigger: CAGAAAGTAGGTGGGGCCCAAGGGCAGGACGCTGAT...TAAGGCTCTAACACATAGACAATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CAA 90 bp | CCCATATACAAATCCACACCCTCAGGTGCTCACACGGCACACACACACACACACTGGAGCTTCCGGATCTaGATCTGCTTTGTTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PIYKSTPSGAHTAHTHTHWSFRI*ICFVFF Trigger: GAAGAAAACAAAGCAGATCAAGATCCGGAAGCTCCA...GTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS TCA 90 bp | TCTCCAGGTGTTACACAGGGAAAGGCTTTTGGAACAGCCATCTCTTaGTGTGTTTTAGGAGAGAGGACTTCAGGTCTGGCCACATCATGG | + |
|
Preference number: 5 (lower is better) Translates to: SPGVTQGKAFGTAIS*CVLGERTSGLATSW Trigger: CCATGATGTGGCCAGACCTGAAGTCCTCTCTCCTAAAACACATCAAGAGATGGCTGTTCCAAAAGCCTTTCCCTGTGTAACACCTGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS CCA 90 bp | GATGCCATTTTCTGGGCAGGTCTCTTGAGAACCTTGTGGGCTTGCTaGAGCTTCCGGATCTTGATCTGCTTTGTTTTCTTCCTCCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: DAIFWAGLLRTLWAC*SFRILICFVFFLHF Trigger: GAAATGGAGGAAGAAAACAAAGCAGATCAAGATCCGGAAGCTCCAGCAAGCCCACAAGGTTCTCAAGAGACCTGCCCAGAAAATGGCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS CCA 90 bp | AGAGCTGTAGATGCCATTTTCTGGGCAGGTCTCTTGAGAACCTTGTaGGCTTGCTGGAGCTTCCGGATCTTGATCTGCTTTGTTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RAVDAIFWAGLLRTL*ACWSFRILICFVFF Trigger: GAAGAAAACAAAGCAGATCAAGATCCGGAAGCTCCAGCAAGCCCACAAGGTTCTCAAGAGACCTGCCCAGAAAATGGCATCTACAGCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CAA 90 bp | TTCTGTCTTCCCCCATATACAAATCCACACCCTCAGGTGCTCACACGGCACACAAGATACCAATACCTCTaGCACCCTTTCCCTTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: FCLPPYTNPHPQVLTRHTRYQYL*HPFPFC Trigger: ACAGAAAGGGAAAGGGTGCAAGAGGTATTGGTATCT...TGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATATGGGGGAAGACAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CAA 90 bp | CACCCTCAGGTGCTCACACGGCACACACACACACACACACACACACACACACACCATTTTAGGAGAATGTaGAAGTACTGCTATTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: HPQVLTRHTHTHTHTHTHHFRRM*KYCYSL Trigger: CAAGGAATAGCAGTACTTCAACATTCTCCTAAAATG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CAA 90 bp | TATACAAATCCACACCCTCAGGTGCTCACACGGCACACACACACACACACACACTGGAGCTTCCGGATCTaGATCTGCTTTGTTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: YTNPHPQVLTRHTHTHTHWSFRI*ICFVFF Trigger: GAAGAAAACAAAGCAGATCAAGATCCGGAAGCTCCA...GTGTGTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CAA 90 bp | CACACACACACACACACACACACACACACACACACTATTGTCTATGTGTTAGAGGAGAACCTTGTGGGCTaGCTGGAGCTTCCGGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHTHTHTHTIVYVLEENLVG*LELPDL Trigger: AAGATCCGGAAGCTCCAGCAAGCCCACAAGGTTCTC...CTCTAACACATAGACAATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CAA 90 bp | TATACAAATCCACACCCTCAGGTGCTCACACGGCACACACACACACACACACACACATTGAATGCTTTCTaGGTGTGCTTCAGAACACTG | + |
|
Preference number: 5 (lower is better) Translates to: YTNPHPQVLTRHTHTHTHTLNAF*VCFRTL Trigger: CAGTGTTCTGAAGCACACCAAGAAAGCATTCAATGT...GTGTGTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CAA 90 bp | CTGTCTTCCCCCATATACAAATCCACACCCTCAGGTGCTCACACGGCACACACACATTTCTGTAAAATCTaGAGAGAAAGCACCAGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: LSSPIYKSTPSGAHTAHTHFCKI*RESTSV Trigger: AACGCTGGTGCTTTCTCTCAAGATTTTACAGAAATG...TGTGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATATGGGGGAAGACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CAA 90 bp | ACACACACACACACACACACACACACACACTATTGTCTATGTGTTAGAGCCTTAGGTCTCTTGAGAACCTaGTGGGCTTGCTGGAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: THTHTHTHTHYCLCVRALGLLRT*WACWSF Trigger: GAAGCTCCAGCAAGCCCACAAGGTTCTCAAGAGACC...TAAGGCTCTAACACATAGACAATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR CAA 90 bp | CTGTCTTCCCCCATATACAAATCCACACCCTCAGGTGCTCACACGGCACACACACATTTTAGGAGAATGTaGAAGTACTGCTATTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LSSPIYKSTPSGAHTAHTHFRRM*KYCYSL Trigger: CAAGGAATAGCAGTACTTCAACATTCTCCTAAAATG...TGTGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATATGGGGGAAGACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CAA 90 bp | CCCATATACAAATCCACACCCTCAGGTGCTCACACGGCACACACACACACACACCAGGTGATTCTTGGATaGTTTTCTGAGAAGAAACTA | + |
|
Preference number: 5 (lower is better) Translates to: PIYKSTPSGAHTAHTHTHQVILG*FSEKKL Trigger: TAGTTTCTTCTCAGAAAACAATCCAAGAATCACCTG...GTGTGTGTGTGTGTGTGCCGTGTGAGCACCTGAGGGTGTGGATTTGTATATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CAA 90 bp | CAACCTTTCCCCTGTTCTGTCTTCCCCCATATACAAATCCACACCCTCAGGTGCCATTTCTGTAAAATCTaGAGAGAAAGCACCAGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: QPFPCSVFPHIQIHTLRCHFCKI*RESTSV Trigger: AACGCTGGTGCTTTCTCTCAAGATTTTACAGAAATG...GCACCTGAGGGTGTGGATTTGTATATGGGGGAAGACAGAACAGGGGAAAGGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS GCA 90 bp | ATGGTTCTGTATTGCTCTTTCTTGACATTGAATGCTTTCTTGGTGTaGTTCAGAACACTGATCTGCAGGCACAGCTTTTGTGGGGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: MVLYCSFLTLNAFLV*FRTLICRHSFCGGW Trigger: CCATCCCCCACAAAAGCTGTGCCTGCAGATCAGTGTTCTGAAGCACACCAAGAAAGCATTCAATGTCAAGAAAGAGCAATACAGAACCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR CAA 90 bp | CAACCTTTCCCCTGTTCTGTCTTCCCCCATATACAAATCCACACCCTCAGGTGCCTGTATTGCTCTTTCTaGACATTGAATGCTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QPFPCSVFPHIQIHTLRCLYCSF*TLNAFL Trigger: CAAGAAAGCATTCAATGTCAAGAAAGAGCAATACAG...GCACCTGAGGGTGTGGATTTGTATATGGGGGAAGACAGAACAGGGGAAAGGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR CAA 90 bp | CAACCTTTCCCCTGTTCTGTCTTCCCCCATATACAAATCCACACCCTCAGGTGCCAGGTGATTCTTGGATaGTTTTCTGAGAAGAAACTA | + |
|
Preference number: 5 (lower is better) Translates to: QPFPCSVFPHIQIHTLRCQVILG*FSEKKL Trigger: TAGTTTCTTCTCAGAAAACAATCCAAGAATCACCTG...GCACCTGAGGGTGTGGATTTGTATATGGGGGAAGACAGAACAGGGGAAAGGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS-3UTR CAA 90 bp | ACACACACACACACACACACACACACACACTATTGTCTATGTGTTAGAGCCTTATCTCAGGCCCAGGTATaGGTTGACATGTTTCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: THTHTHTHTHYCLCVRALSQAQV*VDMFQV Trigger: CACCTGAAACATGTCAACCAATACCTGGGCCTGAGA...TAAGGCTCTAACACATAGACAATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS GCA 90 bp | CTCTTGAGAACCTTGTGGGCTTGCTGGAGCTTCCGGATCTTGATCTaGTTTGTTTTCTTCCTCCATTTCTGTAAAATCTTGAGAGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLRTLWACWSFRILI*FVFFLHFCKILRES Trigger: GCTTTCTCTCAAGATTTTACAGAAATGGAGGAAGAAAACAAAGCAGATCAAGATCCGGAAGCTCCAGCAAGCCCACAAGGTTCTCAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CAA 90 bp | CACACACACACACACACACACACACACACACACACTATTGTCTATGTGTTAGAGAGGAGAGAGGTGTGTTaGAGAATGGTTCTGTATTGC | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHTHTHTHTIVYVLERREVC*RMVLYC Trigger: GCAATACAGAACCATTCTCAAACACACCTCTCTCCT...CTCTAACACATAGACAATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CAA 90 bp | AATTGCTATCTTCTCCTCAGAACTACCAAATATATGTTTCCTCTTAGAGGGGAAGAGAACCTTGTGGGCTaGCTGGAGCTTCCGGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: NCYLLLRTTKYMFPLRGEENLVG*LELPDL Trigger: AAGATCCGGAAGCTCCAGCAAGCCCACAAGGTTCTC...TTCCCCTCTAAGAGGAAACATATATTTGGTAGTTCTGAGGAGAAGATAGCAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CAA 90 bp | ATCTTCTCCTCAGAACTACCAAATATATGTTTCCTCTTAGAGGGGAAAATCAACTTCTGGGCAGGTCTCTaGAGAACCTTGTGGGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: IFSSELPNICFLLEGKINFWAGL*RTLWAC Trigger: GCAAGCCCACAAGGTTCTCAAGAGACCTGCCCAGAA...GTTGATTTTCCCCTCTAAGAGGAAACATATATTTGGTAGTTCTGAGGAGAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS GCA 90 bp | GGTGTGTTTGAGAATGGTTCTGTATTGCTCTTTCTTGACATTGAATaGTTTCTTGGTGTGCTTCAGAACACTGATCTGCAGGCACAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GVFENGSVLLFLDIE*FLGVLQNTDLQAQL Trigger: AAGCTGTGCCTGCAGATCAGTGTTCTGAAGCACACCAAGAAAGCATTCAATGTCAAGAAAGAGCAATACAGAACCATTCTCAAACACACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CAA 90 bp | CACACACACACACACACACACACACACACACACACTATTGTCTATGTGTTAGAGCTGTATTGCTCTTTCTaGACATTGAATGCTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHTHTHTHTIVYVLELYCSF*TLNAFL Trigger: CAAGAAAGCATTCAATGTCAAGAAAGAGCAATACAG...CTCTAACACATAGACAATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CAA 90 bp | ATCTTCTCCTCAGAACTACCAAATATATGTTTCCTCTTAGAGGGGAAAATCAACAAGTACTGCTATTCCTaGGCATGTGGTAGGAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: IFSSELPNICFLLEGKINKYCYS*ACGRRE Trigger: CTCTCTCCTACCACATGCCAAGGAATAGCAGTACTT...GTTGATTTTCCCCTCTAAGAGGAAACATATATTTGGTAGTTCTGAGGAGAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS-3UTR CAA 90 bp | ATCTTCTCCTCAGAACTACCAAATATATGTTTCCTCTTAGAGGGGAAAATCAACAGGAGAGAGGTGTGTTaGAGAATGGTTCTGTATTGC | + |
|
Preference number: 5 (lower is better) Translates to: IFSSELPNICFLLEGKINRREVC*RMVLYC Trigger: GCAATACAGAACCATTCTCAAACACACCTCTCTCCT...GTTGATTTTCCCCTCTAAGAGGAAACATATATTTGGTAGTTCTGAGGAGAAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS GCA 90 bp | AGTGAATTCTTTATAAGTCTCGTGAGAAATGAATTCAGGTTCAACTaGTTCTTGGTGTGTCTTTGTAGAAACGCCTTCAGAAACAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SEFFISLVRNEFRFN*FLVCLCRNAFRNSA Trigger: TGCACTGTTTCTGAAGGCGTTTCTACAAAGACACACCAAGAAGCAGTTGAACCTGAATTCATTTCTCACGAGACTTATAAAGAATTCACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS CCA 72 bp | GCGTTCTCGCTGTCCTGTGCATCAGCGTCCTGCCCTTaGGCCCCACCTACTTTCTGGGCTCCTTCTGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: AFSLSCASASCP*APPTFWAPSGR Trigger: CCTTCCAGAAGGAGCCCAGAAAGTAGGTGGGGCCCAAGGGCAGGACGCTGATGCACAGGACAGCGAGAACGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS CCA 72 bp | GCATCAGCGTCCTGCCCTTGGGCCCCACCTACTTTCTaGGCTCCTTCTGGAAGGCTGTGTTTAGGCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ASASCPWAPPTF*APSGRLCLGSS Trigger: GGAGGAGCCTAAACACAGCCTTCCAGAAGGAGCCCAGAAAGTAGGTGGGGCCCAAGGGCAGGACGCTGATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS CAA 72 bp | AGCGTTCTCGCTGTCCTGTGCATCAGCGTCCTGCCCTaGGGCCCCACCTACTTTCTGGGCTCCTTCTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SVLAVLCISVLP*GPTYFLGSFWK Trigger: CTTCCAGAAGGAGCCCAGAAAGTAGGTGGGGCCCAAGGGCAGGACGCTGATGCACAGGACAGCGAGAACGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS CAA 90 bp | GAAAGCACCAGCGTTCTCGCTGTCCTGTGCATCAGCGTCCTGCCCTaGGGCCCCACCTACTTTCTGGGCTCCTTCTGGAAGGCTGTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: ESTSVLAVLCISVLP*GPTYFLGSFWKAVF Trigger: AAACACAGCCTTCCAGAAGGAGCCCAGAAAGTAGGTGGGGCCCAAGGGCAGGACGCTGATGCACAGGACAGCGAGAACGCTGGTGCTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS GCA 72 bp | ATCTTGAGAGAAAGCACCAGCGTTCTCGCTGTCCTGTaGATCAGCGTCCTGCCCTTGGGCCCCACCTACTTT | + |
|
Preference number: 6 (lower is better) Translates to: ILRESTSVLAVL*ISVLPLGPTYF Trigger: AAAGTAGGTGGGGCCCAAGGGCAGGACGCTGATGCACAGGACAGCGAGAACGCTGGTGCTTTCTCTCAAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS CCA 72 bp | AGAGTGGCTCGGCTGCAGCCATTTCTTCAAGTGCTTTaGGAGGATAGGTTTGGGGCACAGCTGTCTCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RVARLQPFLQVL*EDRFGAQLSPG Trigger: GCCAGGAGACAGCTGTGCCCCAAACCTATCCTCCCAAAGCACTTGAAGAAATGGCTGCAGCCGAGCCACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS TCA 72 bp | GATCCAATGATGTCTGGAGCACAGGACTTCTGTGGGTaGGCTTCAGGCATCTGGGGGAGCTTCAGACGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: DPMMSGAQDFCG*ASGIWGSFRRG Trigger: ACCTCGTCTGAAGCTCCCCCAGATGCCTGAAGCTCACCCACAGAAGTCCTGTGCTCCAGACATCATTGGATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
||
| CDS CCA 72 bp | CCAAGATCCAATGATGTCTGGAGCACAGGACTTCTGTaGGTGAGCTTCAGGCATCTGGGGGAGCTTCAGACG | + |
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Preference number: 6 (lower is better) Translates to: PRSNDVWSTGLL*VSFRHLGELQT Trigger: CGTCTGAAGCTCCCCCAGATGCCTGAAGCTCACCCACAGAAGTCCTGTGCTCCAGACATCATTGGATCTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS CAA 90 bp | TGCTTTCTTGGTGTGCTTCAGAACACTGATCTGCAGGCACAGCTTTaGTGGGGGATGGGACCAAGGGGAGGGCTTCAGTTGCAGAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: CFLGVLQNTDLQAQL*WGMGPRGGLQLQSS Trigger: GGAACTCTGCAACTGAAGCCCTCCCCTTGGTCCCATCCCCCACAAAAGCTGTGCCTGCAGATCAGTGTTCTGAAGCACACCAAGAAAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS GCA 72 bp | ACCAAGGGGAGGGCTTCAGTTGCAGAGTTCCCAGGGTaGTCGGTTTCTTCCTCAGCAGATACCAATACCTCT | + |
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Preference number: 6 (lower is better) Translates to: TKGRASVAEFPG*SVSSSADTNTS Trigger: AGAGGTATTGGTATCTGCTGAGGAAGAAACCGAGCACCCTGGGAACTCTGCAACTGAAGCCCTCCCCTTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS CAA 72 bp | AGCAGAGCTGTAGATGCCATTTTCTGGGCAGGTCTCTaGAGAACCTTGTGGGCTTGCTGGAGCTTCCGGATC | + |
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Preference number: 6 (lower is better) Translates to: SRAVDAIFWAGL*RTLWACWSFRI Trigger: GATCCGGAAGCTCCAGCAAGCCCACAAGGTTCTCAAGAGACCTGCCCAGAAAATGGCATCTACAGCTCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS CAA 72 bp | GAGAGAGCCTCAGGTCCAGCCATATCTTGGGGCACTTaGGAAGAATGGTTTGGGGACACAGTTGTTTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: ERASGPAISWGT*EEWFGDTVVSW Trigger: CCAGGAAACAACTGTGTCCCCAAACCATTCTTCCAAAGTGCCCCAAGATATGGCTGGACCTGAGGCTCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS CAA 72 bp | GTAGATGCCATTTTCTGGGCAGGTCTCTTGAGAACCTaGTGGGCTTGCTGGAGCTTCCGGATCTTGATCTGC | + |
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Preference number: 6 (lower is better) Translates to: VDAIFWAGLLRT*WACWSFRILIC Trigger: GCAGATCAAGATCCGGAAGCTCCAGCAAGCCCACAAGGTTCTCAAGAGACCTGCCCAGAAAATGGCATCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS CAA 90 bp | TTCCTGGCACATGTTAGGAGAGAGAGCCTCAGGTCCAGCCATATCTaGGGGCACTTTGGAAGAATGGTTTGGGGACACAGTTGTTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: FLAHVRRESLRSSHI*GHFGRMVWGHSCFL Trigger: CAGGAAACAACTGTGTCCCCAAACCATTCTTCCAAAGTGCCCCAAGATATGGCTGGACCTGAGGCTCTCTCTCCTAACATGTGCCAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS CCA 72 bp | GATGCCATTTTCTGGGCAGGTCTCTTGAGAACCTTGTaGGCTTGCTGGAGCTTCCGGATCTTGATCTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: DAIFWAGLLRTL*ACWSFRILICF Trigger: AAAGCAGATCAAGATCCGGAAGCTCCAGCAAGCCCACAAGGTTCTCAAGAGACCTGCCCAGAAAATGGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS CAA 72 bp | CATGTTAGGAGAGAGAGCCTCAGGTCCAGCCATATCTaGGGGCACTTTGGAAGAATGGTTTGGGGACACAGT | + |
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Preference number: 6 (lower is better) Translates to: HVRRESLRSSHI*GHFGRMVWGHS Trigger: ACTGTGTCCCCAAACCATTCTTCCAAAGTGCCCCAAGATATGGCTGGACCTGAGGCTCTCTCTCCTAACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS TCA 72 bp | TACCAATACCTCTTGCACCCTTTCCCTTTCTGTTTGTaGCCAAGGCTCTGCCTTTTGCTCCACGTTCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: YQYLLHPFPFCL*PRLCLLLHVPL Trigger: CAAGGGAACGTGGAGCAAAAGGCAGAGCCTTGGTCACAAACAGAAAGGGAAAGGGTGCAAGAGGTATTGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS TCA 72 bp | GTCTTCAGGCCCCGACATTTCATGGCAGGTTTCCAGTaGATAGTTCTCAGGCCCAGGTATTGGTTGACATGT | + |
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Preference number: 6 (lower is better) Translates to: VFRPRHFMAGFQ*IVLRPRYWLTC Trigger: ACATGTCAACCAATACCTGGGCCTGAGAACTATTCACTGGAAACCTGCCATGAAATGTCGGGGCCTGAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS GCA 72 bp | TGTTTCCTGGCACATTTTAGGAGAGAGTGGCTCGGCTaGAGCCATTTCTTCAAGTGCTTTGGGAGGATAGGT | + |
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Preference number: 6 (lower is better) Translates to: CFLAHFRREWLG*SHFFKCFGRIG Trigger: ACCTATCCTCCCAAAGCACTTGAAGAAATGGCTGCAGCCGAGCCACTCTCTCCTAAAATGTGCCAGGAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS CCA 72 bp | TTCTGGGCAGGTCTCTTGAGAACCTTGTGGGCTTGCTaGAGCTTCCGGATCTTGATCTGCTTTGTTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: FWAGLLRTLWAC*SFRILICFVFF Trigger: GAAGAAAACAAAGCAGATCAAGATCCGGAAGCTCCAGCAAGCCCACAAGGTTCTCAAGAGACCTGCCCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS TCA 72 bp | GTTACACAGGGAAAGGCTTTTGGAACAGCCATCTCTTaGTGTGTTTTAGGAGAGAGGACTTCAGGTCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: VTQGKAFGTAIS*CVLGERTSGLA Trigger: GGCCAGACCTGAAGTCCTCTCTCCTAAAACACATCAAGAGATGGCTGTTCCAAAAGCCTTTCCCTGTGTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS GCA 72 bp | CTTTCCCTTTCTGTTTGTGACCAAGGCTCTGCCTTTTaGTCCACGTTCCCTTGTCTCTTTCGGCCTCTTTTA | + |
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Preference number: 6 (lower is better) Translates to: LSLSVCDQGSAF*STFPCLFRPLL Trigger: TAAAAGAGGCCGAAAGAGACAAGGGAACGTGGAGCAAAAGGCAGAGCCTTGGTCACAAACAGAAAGGGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS GCA 72 bp | TGCTCGGTTTCTTCCTCAGCAGATACCAATACCTCTTaGACCCTTTCCCTTTCTGTTTGTGACCAAGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: CSVSSSADTNTS*TLSLSVCDQGS Trigger: AGAGCCTTGGTCACAAACAGAAAGGGAAAGGGTGCAAGAGGTATTGGTATCTGCTGAGGAAGAAACCGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS GCA 72 bp | ATTTTCTGGGCAGGTCTCTTGAGAACCTTGTGGGCTTaGTGGAGCTTCCGGATCTTGATCTGCTTTGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: IFWAGLLRTLWA*WSFRILICFVF Trigger: GAAAACAAAGCAGATCAAGATCCGGAAGCTCCAGCAAGCCCACAAGGTTCTCAAGAGACCTGCCCAGAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS CCA 72 bp | TTCTCTGTTTCTCAGACTCCAAGATCCAATGATGTCTaGAGCACAGGACTTCTGTGGGTGAGCTTCAGGCAT | + |
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Preference number: 6 (lower is better) Translates to: FSVSQTPRSNDV*STGLLWVSFRH Trigger: ATGCCTGAAGCTCACCCACAGAAGTCCTGTGCTCCAGACATCATTGGATCTTGGAGTCTGAGAAACAGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS CAA 72 bp | CATTTTCTGGGCAGGTCTCTTGAGAACCTTGTGGGCTaGCTGGAGCTTCCGGATCTTGATCTGCTTTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: HFLGRSLENLVG*LELPDLDLLCF Trigger: AAAACAAAGCAGATCAAGATCCGGAAGCTCCAGCAAGCCCACAAGGTTCTCAAGAGACCTGCCCAGAAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS CAA 72 bp | TGTTACACAGGGAAAGGCTTTTGGAACAGCCATCTCTaGATGTGTTTTAGGAGAGAGGACTTCAGGTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: CYTGKGFWNSHL*MCFRREDFRSG Trigger: GCCAGACCTGAAGTCCTCTCTCCTAAAACACATCAAGAGATGGCTGTTCCAAAAGCCTTTCCCTGTGTAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS CAA 90 bp | TTGAGAATGGTTCTGTATTGCTCTTTCTTGACATTGAATGCTTTCTaGGTGTGCTTCAGAACACTGATCTGCAGGCACAGCTTTTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: LRMVLYCSFLTLNAF*VCFRTLICRHSFCG Trigger: CCCACAAAAGCTGTGCCTGCAGATCAGTGTTCTGAAGCACACCAAGAAAGCATTCAATGTCAAGAAAGAGCAATACAGAACCATTCTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS GCA 72 bp | GGTAGGAGAGAGGTGTGTTTGAGAATGGTTCTGTATTaGTCTTTCTTGACATTGAATGCTTTCTTGGTGTGC | + |
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Preference number: 6 (lower is better) Translates to: GRREVCLRMVLY*SFLTLNAFLVC Trigger: GCACACCAAGAAAGCATTCAATGTCAAGAAAGAGCAATACAGAACCATTCTCAAACACACCTCTCTCCTACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS CAA 72 bp | AGTCTCGTGAGAAATGAATTCAGGTTCAACTGCTTCTaGGTGTGTCTTTGTAGAAACGCCTTCAGAAACAGT | + |
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Preference number: 6 (lower is better) Translates to: SLVRNEFRFNCF*VCLCRNAFRNS Trigger: ACTGTTTCTGAAGGCGTTTCTACAAAGACACACCAAGAAGCAGTTGAACCTGAATTCATTTCTCACGAGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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| CDS CAA 90 bp | TTCTTTATAAGTCTCGTGAGAAATGAATTCAGGTTCAACTGCTTCTaGGTGTGTCTTTGTAGAAACGCCTTCAGAAACAGTGCATTCTCT | + |
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Preference number: 6 (lower is better) Translates to: FFISLVRNEFRFNCF*VCLCRNAFRNSAFS Trigger: AGAGAATGCACTGTTTCTGAAGGCGTTTCTACAAAGACACACCAAGAAGCAGTTGAACCTGAATTCATTTCTCACGAGACTTATAAAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071096.3 ENSMUST00000107764.9 |
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