RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HELZ2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000027580

Ensembl transcript IDs: ENSMUST00000094203.11, ENSMUST00000108831.8, ENSMUST00000121484.2

Found 884 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCTGTGACTGTGACCTGTGGCAATCCTCTGTATGCCCAGGACCTTaGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCA +
Preference number: 1 (lower is better)
Translates to: SCDCDLWQSSVCPGP*HRRMRDIPSVDGTS
Trigger: TGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCAAGGTCCTGGGCATACAGAGGATTGCCACAGGTCACAGTCACAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
3UTR TCA 90 bp CACACTGAAGGGGGAGATGATCCCAGCTTTGGAATTGTCAGGAAGTaGGCATATAAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTT +
Preference number: 1 (lower is better)
Translates to: HTEGGDDPSFGIVRK*AYKRETCWERFHLL
Trigger: AAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTTATATGCTCACTTCCTGACAATTCCAAAGCTGGGATCATCTCCCCCTTCAGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
3UTR CCA 90 bp AGACAGCAGAAGTGGTTGACTAATTTGAGCTGTGACTGTGACCTGTaGCAATCCTCTGTATGCCCAGGACCTTGGCATAGAAGAATGAGG +
Preference number: 1 (lower is better)
Translates to: RQQKWLTNLSCDCDL*QSSVCPGPWHRRMR
Trigger: CCTCATTCTTCTATGCCAAGGTCCTGGGCATACAGAGGATTGCCACAGGTCACAGTCACAGCTCAAATTAGTCAACCACTTCTGCTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
3UTR GCA 90 bp TTGACTAATTTGAGCTGTGACTGTGACCTGTGGCAATCCTCTGTATaGCCAGGACCTTGGCATAGAAGAATGAGGGACATACCCTCAGTT +
Preference number: 1 (lower is better)
Translates to: LTNLSCDCDLWQSSV*PGPWHRRMRDIPSV
Trigger: AACTGAGGGTATGTCCCTCATTCTTCTATGCCAAGGTCCTGGGCATACAGAGGATTGCCACAGGTCACAGTCACAGCTCAAATTAGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
3UTR-3UTR GCA 90 bp GGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACTGGCAATCCTCTGTATaGCCAGGACCTTGGCATAGA +
Preference number: 2 (lower is better)
Translates to: GEEQAQKCWVPYSQLPAHWQSSV*PGPWHR
Trigger: TCTATGCCAAGGTCCTGGGCATACAGAGGATTGCCA...GTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
3UTR-3UTR TCA 90 bp AGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACTGTCACTGCTACATaGCTGCAGCCAATACCAGGG +
Preference number: 2 (lower is better)
Translates to: SWEKGADLQLFPLHSSPSTVTAT*LQPIPG
Trigger: CCCTGGTATTGGCTGCAGTCATGTAGCAGTGACAGT...ACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
3UTR-3UTR GCA 90 bp CATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCTGGCAATCCTCTGTATaGCCAGGACCTTGGCATAGA +
Preference number: 2 (lower is better)
Translates to: HGEEQAQKCWVPYSQLPAWQSSV*PGPWHR
Trigger: TCTATGCCAAGGTCCTGGGCATACAGAGGATTGCCA...GGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
3UTR-3UTR CCA 90 bp AGCCCCAGATGTCCTGGTGTATATTTCACTTGCAGCAACTCTGACCTCGGCGGGAAAAGCAAAGGGAGTTaGGAGAAAGGGGCCGACCTC +
Preference number: 2 (lower is better)
Translates to: SPRCPGVYFTCSNSDLGGKSKGS*EKGADL
Trigger: GAGGTCGGCCCCTTTCTCCCAACTCCCTTTGCTTTT...CCCGCCGAGGTCAGAGTTGCTGCAAGTGAAATATACACCAGGACATCTGGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
3UTR-3UTR TCA 90 bp CTGGGGTCCTCTGTGACCACTAAGAGGTGTCCCAGTCATCAAATGCCCCAGAAAACTGTCACTGCTACATaGCTGCAGCCAATACCAGGG +
Preference number: 2 (lower is better)
Translates to: LGSSVTTKRCPSHQMPQKTVTAT*LQPIPG
Trigger: CCCTGGTATTGGCTGCAGTCATGTAGCAGTGACAGT...TTTCTGGGGCATTTGATGACTGGGACACCTCTTAGTGGTCACAGAGGACCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
3UTR-3UTR TCA 90 bp GGACATAGGTATGGAAGCATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTGGAGGTAGGGCTGTGTaGGCATTTGGTTCAGCTCTG +
Preference number: 2 (lower is better)
Translates to: GHRYGSMVKNRPRSAGYLGGRAV*AFGSAL
Trigger: CAGAGCTGAACCAAATGCTCACACAGCCCTACCTCC...AAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATGCTTCCATACCTATGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
3UTR CAA 90 bp ATACCAGGGCCTTTCCCAAGAAGACAGCAGAAGTGGTTGACTAATTaGAGCTGTGACTGTGACCTGTGGCAATCCTCTGTATGCCCAGGA +
Preference number: 2 (lower is better)
Translates to: IPGPFPRRQQKWLTN*SCDCDLWQSSVCPG
Trigger: TCCTGGGCATACAGAGGATTGCCACAGGTCACAGTCACAGCTCAAATTAGTCAACCACTTCTGCTGTCTTCTTGGGAAAGGCCCTGGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
3UTR-3UTR GCA 90 bp AGGAACTTAATTTGTAGAAAACACCAGATATTATCCTCACAGGAGGTTCTGCAGCAGCTCTGTCCTTCCTaGCCCTGTGCTTGGGGGCGG +
Preference number: 2 (lower is better)
Translates to: RNLICRKHQILSSQEVLQQLCPS*PCAWGR
Trigger: CCGCCCCCAAGCACAGGGGCAGGAAGGACAGAGCTG...CTGCAGAACCTCCTGTGAGGATAATATCTGGTGTTTTCTACAAATTAAGTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
3UTR-3UTR CCA 90 bp AGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTAGAAGACAGCAGAAGTaGTTGACTAATTTGAGCTGT +
Preference number: 2 (lower is better)
Translates to: SWEKGADLQLFPLHSSPSRRQQK*LTNLSC
Trigger: ACAGCTCAAATTAGTCAACCACTTCTGCTGTCTTCT...ACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
3UTR-3UTR GCA 90 bp AGTGAGCATATAAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGGTCCCAGTCATCAAATaGCCCAGAAAAGCAAAGGGA +
Preference number: 2 (lower is better)
Translates to: SEHIRGRHAGRDFTCLVQVPVIK*PRKAKG
Trigger: TCCCTTTGCTTTTCTGGGGCATTTGATGACTGGGAC...CTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTTATATGCTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
3UTR-3UTR CCA 90 bp AGATCTCAGTGTCAAAGTGTAGTCTCAGAGGAGTCTTATTTCTGTTTAGGCCCCAAAAGCAAAGGGAGTTaGGAGAAAGGGGCCGACCTC +
Preference number: 2 (lower is better)
Translates to: RSQCQSVVSEESYFCLGPKSKGS*EKGADL
Trigger: GAGGTCGGCCCCTTTCTCCCAACTCCCTTTGCTTTT...GGGGCCTAAACAGAAATAAGACTCCTCTGAGACTACACTTTGACACTGAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
3UTR-3UTR TCA 90 bp AGGAACTTAATTTGTAGAAAACACCAGATATTATCCTCACAGGAGGTTCTGCAGGGAGGTAGGGCTGTGTaGGCATTTGGTTCAGCTCTG +
Preference number: 2 (lower is better)
Translates to: RNLICRKHQILSSQEVLQGGRAV*AFGSAL
Trigger: CAGAGCTGAACCAAATGCTCACACAGCCCTACCTCC...CTGCAGAACCTCCTGTGAGGATAATATCTGGTGTTTTCTACAAATTAAGTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
3UTR-3UTR TCA 90 bp AGGAACTTAATTTGTAGAAAACACCAGATATTATCCTCACAGGAGGTTCTGCAGTCCAGTAGAAAAGGATaGTGGTGCCAGGAAGGTTGT +
Preference number: 2 (lower is better)
Translates to: RNLICRKHQILSSQEVLQSSRKG*WCQEGC
Trigger: ACAACCTTCCTGGCACCATCATCCTTTTCTACTGGA...CTGCAGAACCTCCTGTGAGGATAATATCTGGTGTTTTCTACAAATTAAGTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
3UTR-3UTR CAA 90 bp CATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCGGGCTGTGTGAGCATTaGGTTCAGCTCTGTCCTTCC +
Preference number: 3 (lower is better)
Translates to: HGEEQAQKCWVPYSQLPAGLCEH*VQLCPS
Trigger: GGAAGGACAGAGCTGAACCAAATGCTCACACAGCCC...GGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
3UTR GCA 72 bp GGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTaGCCACAGGCCAGCTGTTTTACATTCCAGGAGGTA +
Preference number: 3 (lower is better)
Translates to: GPEVLGTLFPAA*PQASCFTFQEV
Trigger: TACCTCCTGGAATGTAAAACAGCTGGCCTGTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
3UTR TCA 72 bp GGCCAGCTGTTTTACATTCCAGGAGGTAGGGCTGTGTaGGCATTTGGTTCAGCTCTGTCCTTCCTGCCCCTG +
Preference number: 3 (lower is better)
Translates to: GQLFYIPGGRAV*AFGSALSFLPL
Trigger: CAGGGGCAGGAAGGACAGAGCTGAACCAAATGCTCACACAGCCCTACCTCCTGGAATGTAAAACAGCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
3UTR GCA 72 bp AACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTaGCTGCCCACAGGCCAGCTGTTTTACATTCCAGGA +
Preference number: 3 (lower is better)
Translates to: NRPRSAGYLIPS*LPTGQLFYIPG
Trigger: TCCTGGAATGTAAAACAGCTGGCCTGTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
3UTR-3UTR CAA 90 bp GGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACAGACAGCAGAAGTGGTaGACTAATTTGAGCTGTGAC +
Preference number: 3 (lower is better)
Translates to: GEEQAQKCWVPYSQLPAHRQQKW*TNLSCD
Trigger: GTCACAGCTCAAATTAGTCAACCACTTCTGCTGTCT...GTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
3UTR-3UTR CAA 90 bp CATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCAAGTGGTTGACTAATTaGAGCTGTGACTGTGACCTG +
Preference number: 3 (lower is better)
Translates to: HGEEQAQKCWVPYSQLPAKWLTN*SCDCDL
Trigger: CAGGTCACAGTCACAGCTCAAATTAGTCAACCACTT...GGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
3UTR-3UTR CAA 90 bp AGTGAGCATATAAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGCTCGGGAATGTTTCCTaGCCCACTCTGAGAGTGCCT +
Preference number: 3 (lower is better)
Translates to: SEHIRGRHAGRDFTCLVQLGNVS*PTLRVP
Trigger: AGGCACTCTCAGAGTGGGCAAGGAAACATTCCCGAG...CTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTTATATGCTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
3UTR GCA 72 bp GTAGAAAACACCAGATATTATCCTCACAGGAGGTTCTaGAGCCAGGCCTTAGAAGCCCCAGATGTCCTGGTG +
Preference number: 3 (lower is better)
Translates to: VENTRYYPHRRF*SQALEAPDVLV
Trigger: CACCAGGACATCTGGGGCTTCTAAGGCCTGGCTGCAGAACCTCCTGTGAGGATAATATCTGGTGTTTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
3UTR-3UTR CAA 90 bp AGCCCCAGATGTCCTGGTGTATATTTCACTTGCAGCAACTCTGACCTCGGCGGGATCCCAGCTTTGGAATaGTCAGGAAGTGAGCATATA +
Preference number: 3 (lower is better)
Translates to: SPRCPGVYFTCSNSDLGGIPALE*SGSEHI
Trigger: TATATGCTCACTTCCTGACAATTCCAAAGCTGGGAT...CCCGCCGAGGTCAGAGTTGCTGCAAGTGAAATATACACCAGGACATCTGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
3UTR TCA 72 bp TGTCCTAAAGCCCTGGACATAGGTATGGAAGCATGGTaGAGAACAGGCCCAGAAGTGCTGGGTACCTTATTC +
Preference number: 3 (lower is better)
Translates to: CPKALDIGMEAW*RTGPEVLGTLF
Trigger: GAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATGCTTCCATACCTATGTCCAGGGCTTTAGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
3UTR TCA 72 bp GGGGGAGATGATCCCAGCTTTGGAATTGTCAGGAAGTaGGCATATAAGAGGGAGACATGCTGGGAGAGATTT +
Preference number: 3 (lower is better)
Translates to: GGDDPSFGIVRK*AYKRETCWERF
Trigger: AAATCTCTCCCAGCATGTCTCCCTCTTATATGCTCACTTCCTGACAATTCCAAAGCTGGGATCATCTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
3UTR-3UTR CAA 90 bp GTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCCAGACAGCAGAAGTGGTaGACTAATTTGAGCTGTGAC +
Preference number: 3 (lower is better)
Translates to: VQTGRSSLLSLLPAQEAARQQKW*TNLSCD
Trigger: GTCACAGCTCAAATTAGTCAACCACTTCTGCTGTCT...GGCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
3UTR-3UTR CAA 90 bp TCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGGTCATCATTAAAGTGGTTGACTAATTaGAGCTGTGACTGTGACCTG +
Preference number: 3 (lower is better)
Translates to: SSSFPSIQVQVQTGRSSLKWLTN*SCDCDL
Trigger: CAGGTCACAGTCACAGCTCAAATTAGTCAACCACTT...TAATGATGACCTTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACAGGCCAGCTGTTTCCAGCTCTGGGCCTGTaGGTGGGCGAAAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: PRSAGYLIPSCLPTGQLFPALGL*VGERPG
Trigger: GCCAGGCCTTTCGCCCACCCACAGGCCCAGAGCTGG...AAACAGCTGGCCTGTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp CCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACAGGCCAGCTGTTTGGTACCAGCCCATCCTaGCAGGCGGCCTGTTCTCGC +
Preference number: 4 (lower is better)
Translates to: PRSAGYLIPSCLPTGQLFGTSPS*QAACSR
Trigger: GCGAGAACAGGCCGCCTGGCAGGATGGGCTGGTACC...AAACAGCTGGCCTGTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp CCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACAGGCCAGCTGTTTGACTGCCGCAGTCTGTaGCTTGGCTGCTGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: PRSAGYLIPSCLPTGQLFDCRSL*LGCCLG
Trigger: GCCGAGGCAGCAGCCAAGGCACAGACTGCGGCAGTC...AAACAGCTGGCCTGTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp GGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACCAGCATTCCAGCTCCTaGGGGTGGCTGGGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GEEQAQKCWVPYSQLPAHQHSSS*GWLGAG
Trigger: GCCAGCACCCAGCCACCCCCAGGAGCTGGAATGCTG...GTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp GGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACTGGCCCCCAGGCACCTaGGTACTCGCCGACTTGAAG +
Preference number: 4 (lower is better)
Translates to: GEEQAQKCWVPYSQLPAHWPPGT*VLADLK
Trigger: CTTCAAGTCGGCGAGTACTCAGGTGCCTGGGGGCCA...GTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACAGGCCAGCTGTTTCCAGGGCCCCATCCTTaGGCACCAAGCTGGCCACAT +
Preference number: 4 (lower is better)
Translates to: PRSAGYLIPSCLPTGQLFPGPHP*APSWPH
Trigger: ATGTGGCCAGCTTGGTGCCCAAGGATGGGGCCCTGG...AAACAGCTGGCCTGTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCAGCCGCACGCCTGTCTaGCTCACTAGCTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: HGEEQAQKCWVPYSQLPASRTPV*LTSSWG
Trigger: CCCCCAGGAGCTAGTGAGCCAGACAGGCGTGCGGCT...GGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp CATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCGCTGCACCTGGCCTTaGATGAGGCGGTGGATGGGA +
Preference number: 4 (lower is better)
Translates to: HGEEQAQKCWVPYSQLPARCTWP*MRRWMG
Trigger: TCCCATCCACCGCCTCATTCAAGGCCAGGTGCAGCG...GGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp CCCAGAAAAGCAAAGGGAGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCGACCAGGGAGAAGGCTaGGTGCATCCTGGCACAAGC +
Preference number: 4 (lower is better)
Translates to: PRKAKGVGRKGPTSSSFPDQGEG*VHPGTS
Trigger: GCTTGTGCCAGGATGCACTCAGCCTTCTCCCTGGTC...GGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACTCCCTTTGCTTTTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp GGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACGCACCACGTGGCGGTTaGCTGTGTGCCAGCATTCCA +
Preference number: 4 (lower is better)
Translates to: GEEQAQKCWVPYSQLPAHAPRGG*LCASIP
Trigger: TGGAATGCTGGCACACAGGCAACCGCCACGTGGTGC...GTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp CCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACAGGCCAGCTGTTTTACAGGAAGAGGCGGTaGAGCAGCGTGTGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: PRSAGYLIPSCLPTGQLFYRKRR*SSVCLA
Trigger: AGCCAGGCACACGCTGCTGCACCGCCTCTTCCTGTA...AAACAGCTGGCCTGTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp CATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCGAGTGGTGGCACAGGTaGAGGGACAGAGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: HGEEQAQKCWVPYSQLPAEWWHR*RDRGTR
Trigger: CCTGGTGCCTCTGTCCCTGCACCTGTGCCACCACTC...GGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp GGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACAGCTGGAAGGTGCCCTaGAACTGCCCCTGGGATGTG +
Preference number: 4 (lower is better)
Translates to: GEEQAQKCWVPYSQLPAHSWKVP*NCPWDV
Trigger: CACATCCCAGGGGCAGTTGCAGGGCACCTTCCAGCT...GTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp GGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACGGCCTGATGCACCGGTaGTGGGTGGCAAGTGACAGA +
Preference number: 4 (lower is better)
Translates to: GEEQAQKCWVPYSQLPAHGLMHR*WVASDR
Trigger: TCTGTCACTTGCCACCCACCACCGGTGCATCAGGCC...GTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CCCAGAAAAGCAAAGGGAGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCTCCACAGAGTCCAGGTaGGCTGGAAGCTCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: PRKAKGVGRKGPTSSSFPSTESR*AGSSRP
Trigger: TGGCCTGGAGCTTCCAGCCCACCTGGACTCTGTGGA...GGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACTCCCTTTGCTTTTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACAGGCCAGCTGTTTCCACAGCTTCAGGGTTaGTGCCAGGAAACCCCGCTG +
Preference number: 4 (lower is better)
Translates to: PRSAGYLIPSCLPTGQLFPQLQG*CQETPL
Trigger: CAGCGGGGTTTCCTGGCACCAACCCTGAAGCTGTGG...AAACAGCTGGCCTGTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACAGGCCAGCTGTTTGGTCTTCCCAGTGCCTaGTGGGCCCTGGATGACTGT +
Preference number: 4 (lower is better)
Translates to: PRSAGYLIPSCLPTGQLFGLPSA*WALDDC
Trigger: ACAGTCATCCAGGGCCCACCAGGCACTGGGAAGACC...AAACAGCTGGCCTGTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000108831.8
CDS-3UTR TCA 90 bp CCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACAGGCCAGCTGTTTTGTAGGTACTCTCATTaGGGCACTGGGTGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: PRSAGYLIPSCLPTGQLFCRYSH*GTGCSG
Trigger: CCCGCTGCACCCAGTGCCTCAATGAGAGTACCTACA...AAACAGCTGGCCTGTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp GGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACCCTCAGAGTGGATGGTaGACACCCACTGGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: GEEQAQKCWVPYSQLPAHPQSGW*TPTGAG
Trigger: TCCAGCACCAGTGGGTGTTCACCATCCACTCTGAGG...GTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp CCCAGAAAAGCAAAGGGAGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCGTCTTCTGCCTGCAATaGGCCCCACAGCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PRKAKGVGRKGPTSSSFPVFCLQ*APQPAS
Trigger: AGAAGCTGGCTGTGGGGCTCATTGCAGGCAGAAGAC...GGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACTCCCTTTGCTTTTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp CCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACAGGCCAGCTGTTTGCAAGCAGGAGCCAGTaGAGGGTGCATGTCATCTGC +
Preference number: 4 (lower is better)
Translates to: PRSAGYLIPSCLPTGQLFASRSQ*RVHVIC
Trigger: GCAGATGACATGCACCCTTCACTGGCTCCTGCTTGC...AAACAGCTGGCCTGTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp GGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACGCAAGCAGGAGCCAGTaGAGGGTGCATGTCATCTGC +
Preference number: 4 (lower is better)
Translates to: GEEQAQKCWVPYSQLPAHASRSQ*RVHVIC
Trigger: GCAGATGACATGCACCCTTCACTGGCTCCTGCTTGC...GTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp GGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACAAATGTCCAGACCAGTaGCTCCTCAGGGCTTCGGGC +
Preference number: 4 (lower is better)
Translates to: GEEQAQKCWVPYSQLPAHKCPDQ*LLRASG
Trigger: GCCCGAAGCCCTGAGGAGGCACTGGTCTGGACATTT...GTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp CCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACAGGCCAGCTGTTTGGGGCTCTGGTGCCCTaGACAGCCTCTTTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: PRSAGYLIPSCLPTGQLFGALVP*TASFSF
Trigger: GAAACTGAAAGAGGCTGTGCAGGGCACCAGAGCCCC...AAACAGCTGGCCTGTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp GGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACAAAGGCCACCATCTGTaGGTGCTCCAGGGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: GEEQAQKCWVPYSQLPAHKGHHL*VLQGGA
Trigger: TGCTCCTCCCTGGAGCACGCACAGATGGTGGCCTTT...GTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp CCCAGAAAAGCAAAGGGAGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCAGCTTGGCTACTAGCTaGTGCTGGGCTGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: PRKAKGVGRKGPTSSSFPSLATS*CWAASS
Trigger: GGAGGAAGCAGCCCAGCAGCAGCTAGTAGCCAAGCT...GGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACTCCCTTTGCTTTTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp GGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACAAGGGCTGTGCTGACTaGTCGGCTCAACAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: GEEQAQKCWVPYSQLPAHKGCAD*SAQQEA
Trigger: GGCTTCCTGTTGAGCCGAGCAGTCAGCACAGCCCTT...GTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp CATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCGGGCTGTCTTGGGCCTaGAGCCCCAAAGCCATACAG +
Preference number: 4 (lower is better)
Translates to: HGEEQAQKCWVPYSQLPAGLSWA*SPKAIQ
Trigger: CTGTATGGCTTTGGGGCTGCAGGCCCAAGACAGCCC...GGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp GGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACGTGCTCCTCGAGCAGTaGATCCACTGCCTGATGCCA +
Preference number: 4 (lower is better)
Translates to: GEEQAQKCWVPYSQLPAHVLLEQ*IHCLMP
Trigger: TGGCATCAGGCAGTGGATGCACTGCTCGAGGAGCAC...GTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp CCCAGAAAAGCAAAGGGAGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCGCAGGGTATCTCCACTaGCCAGCTCGTAGACCACCT +
Preference number: 4 (lower is better)
Translates to: PRKAKGVGRKGPTSSSFPAGYLH*PARRPP
Trigger: AGGTGGTCTACGAGCTGGGCAGTGGAGATACCCTGC...GGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACTCCCTTTGCTTTTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp CCCAGAAAAGCAAAGGGAGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCAAGGTGCCCTGCAACTaGCCCTGGGATGTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: PRKAKGVGRKGPTSSSFPKVPCN*PWDVSQ
Trigger: TTGGGACACATCCCAGGGGCAGTTGCAGGGCACCTT...GGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACTCCCTTTGCTTTTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp CCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACAGGCCAGCTGTTTTCAGTGGCCTCTGCCTaGTCCCCATATACACGCAGG +
Preference number: 4 (lower is better)
Translates to: PRSAGYLIPSCLPTGQLFSVASA*SPYTRR
Trigger: CCTGCGTGTATATGGGGAGCAGGCAGAGGCCACTGA...AAACAGCTGGCCTGTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp CCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACAGGCCAGCTGTTTAAGTCTAGGAGACGGTaGCAGAGTGGGCAGCAGCGT +
Preference number: 4 (lower is better)
Translates to: PRSAGYLIPSCLPTGQLFKSRRR*QSGQQR
Trigger: ACGCTGCTGCCCACTCTGGCACCGTCTCCTAGACTT...AAACAGCTGGCCTGTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCATAGCGCATAGGCGTTaGGAAGCTAGGCCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: HGEEQAQKCWVPYSQLPAIAHRR*EARPAA
Trigger: GGCCGCAGGCCTAGCTTCCCAACGCCTATGCGCTAT...GGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCGGCCTGATGCACCGGTaGTGGGTGGCAAGTGACAGA +
Preference number: 4 (lower is better)
Translates to: HGEEQAQKCWVPYSQLPAGLMHR*WVASDR
Trigger: TCTGTCACTTGCCACCCACCACCGGTGCATCAGGCC...GGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CCCAGAAAAGCAAAGGGAGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCCTCTCGGGCCTTCTGTaGTGCAGAGCAAACCACGGT +
Preference number: 4 (lower is better)
Translates to: PRKAKGVGRKGPTSSSFPLSGLL*CRANHG
Trigger: ACCGTGGTTTGCTCTGCACCACAGAAGGCCCGAGAG...GGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACTCCCTTTGCTTTTCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCCACAGCTTCAGGGTTaGTGCCAGGAAACCCCGCTG +
Preference number: 4 (lower is better)
Translates to: HGEEQAQKCWVPYSQLPAPQLQG*CQETPL
Trigger: CAGCGGGGTTTCCTGGCACCAACCCTGAAGCTGTGG...GGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACAGGCCAGCTGTTTCCACCAGCCAGTTCATaGTCCCAGTCACCAGACAGC +
Preference number: 4 (lower is better)
Translates to: PRSAGYLIPSCLPTGQLFPPASS*SQSPDS
Trigger: GCTGTCTGGTGACTGGGACCATGAACTGGCTGGTGG...AAACAGCTGGCCTGTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CCCAGAAAAGCAAAGGGAGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCCTTCCCAGTGCCTGGTaGGCCCTGGATGACTGTGAA +
Preference number: 4 (lower is better)
Translates to: PRKAKGVGRKGPTSSSFPLPSAW*ALDDCE
Trigger: TTCACAGTCATCCAGGGCCCACCAGGCACTGGGAAG...GGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACTCCCTTTGCTTTTCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000108831.8
CDS-3UTR CCA 90 bp CCCAGAAAAGCAAAGGGAGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCGGCCGAAGCTGCTTGTaGTCTCCAAGCAGAACCACC +
Preference number: 4 (lower is better)
Translates to: PRKAKGVGRKGPTSSSFPGRSCL*SPSRTT
Trigger: GGTGGTTCTGCTTGGAGACCACAAGCAGCTTCGGCC...GGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACTCCCTTTGCTTTTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGTGATTGCCACGAAATaGGGGTGGGGTGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RGRPPALSPPFKSKYKQEVIATK*GWGGPG
Trigger: CCCTGGCCCACCCCACCCTCATTTCGTGGCAATCAC...TTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp GGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACCTCAATCTGTTCCAGTaGCAGCTCCTCAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GEEQAQKCWVPYSQLPAHLNLFQ*QLLREG
Trigger: GCCTTCCCTGAGGAGCTGTCACTGGAACAGATTGAG...GTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp CATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCGCACCTCATCCCCCGTaGATGCCATCCCACAGTTCA +
Preference number: 4 (lower is better)
Translates to: HGEEQAQKCWVPYSQLPAAPHPP*MPSHSS
Trigger: TGAACTGTGGGATGGCATTCACGGGGGATGAGGTGC...GGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTAGCTGGCGGGCAGCATaGGTACTGGCTCCCTATTGG +
Preference number: 4 (lower is better)
Translates to: SWEKGADLQLFPLHSSPSSWRAA*VLAPYW
Trigger: CCAATAGGGAGCCAGTACTCATGCTGCCCGCCAGCT...ACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp CCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACAGGCCAGCTGTTTTTGCATACTGGCGACTaGAGTCCAGGCAGAGCCCAT +
Preference number: 4 (lower is better)
Translates to: PRSAGYLIPSCLPTGQLFLHTGD*SPGRAH
Trigger: ATGGGCTCTGCCTGGACTTCAGTCGCCAGTATGCAA...AAACAGCTGGCCTGTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp GGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACACTGTGTGTCCAGCATaGTGGCATCCCTGTGGTACC +
Preference number: 4 (lower is better)
Translates to: GEEQAQKCWVPYSQLPAHTVCPA*WHPCGT
Trigger: GGTACCACAGGGATGCCATCATGCTGGACACACAGT...GTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp CCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACAGGCCAGCTGTTTGACACCAGGCTGTGTTaGGCCTCACAGAAGTCTAGG +
Preference number: 4 (lower is better)
Translates to: PRSAGYLIPSCLPTGQLFDTRLC*ASQKSR
Trigger: CCTAGACTTCTGTGAGGCTCAACACAGCCTGGTGTC...AAACAGCTGGCCTGTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp CATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCGGGGCTCTGGTGCCCTaGACAGCCTCTTTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: HGEEQAQKCWVPYSQLPAGALVP*TASFSF
Trigger: GAAACTGAAAGAGGCTGTGCAGGGCACCAGAGCCCC...GGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp CCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACAGGCCAGCTGTTTCTGCTCAGGGCTTCCTaGCACATGGCAGAACATGAG +
Preference number: 4 (lower is better)
Translates to: PRSAGYLIPSCLPTGQLFLLRAS*HMAEHE
Trigger: CTCATGTTCTGCCATGTGGCAGGAAGCCCTGAGCAG...AAACAGCTGGCCTGTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGCCCCAGATGTCCTGGTGTATATTTCACTTGCAGCAACTCTGACCTCGGCGGGAGTCTGTGCCTTGGCTaGTGCCTCGGCTCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: SPRCPGVYFTCSNSDLGGSLCLG*CLGSGL
Trigger: GAGACCAGAGCCGAGGCAGCAGCCAAGGCACAGACT...CCCGCCGAGGTCAGAGTTGCTGCAAGTGAAATATACACCAGGACATCTGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGGAGGTTCTGCAGCCAGGCCTTAGAAGCCCCAGATGTCCTGGTGTATATTTCAGACTGCCGCAGTCTGTaGCTTGGCTGCTGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: RRFCSQALEAPDVLVYISDCRSL*LGCCLG
Trigger: GCCGAGGCAGCAGCCAAGGCACAGACTGCGGCAGTC...TGAAATATACACCAGGACATCTGGGGCTTCTAAGGCCTGGCTGCAGAACCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGCCCCAGATGTCCTGGTGTATATTTCACTTGCAGCAACTCTGACCTCGGCGGGGGCTTGAGGGTCTCATaGCTCACACGCTGCACCTGG +
Preference number: 4 (lower is better)
Translates to: SPRCPGVYFTCSNSDLGGGLRVS*LTRCTW
Trigger: CCAGGTGCAGCGTGTGAGGCATGAGACCCTCAAGCC...CCCGCCGAGGTCAGAGTTGCTGCAAGTGAAATATACACCAGGACATCTGGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp CTGGGGTCCTCTGTGACCACTAAGAGGTGTCCCAGTCATCAAATGCCCCAGAAACTTCCAGCTGGAAGGTaGCCTGCAACTGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LGSSVTTKRCPSHQMPQKLPAGR*PATAPG
Trigger: CCCAGGGGCAGTTGCAGGGCACCTTCCAGCTGGAAG...TTTCTGGGGCATTTGATGACTGGGACACCTCTTAGTGGTCACAGAGGACCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAACTTCCAGCTGGAAGGTaGCCTGCAACTGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: RGRPPALSPPFKSKYKQELPAGR*PATAPG
Trigger: CCCAGGGGCAGTTGCAGGGCACCTTCCAGCTGGAAG...TTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp CCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACAGGCCAGCTGTTTACCACAGGCCGAAGCTaGTTGTGGTCTCCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: PRSAGYLIPSCLPTGQLFTTGRS*LWSPSR
Trigger: TCTGCTTGGAGACCACAAGCAGCTTCGGCCTGTGGT...AAACAGCTGGCCTGTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp GGACATAGGTATGGAAGCATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTTCCAGCTCCTGGGGGTaGCTGGGTGCTGGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: GHRYGSMVKNRPRSAGYLSSSWG*LGAGFP
Trigger: TGGGAAGCCAGCACCCAGCCACCCCCAGGAGCTGGA...AAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATGCTTCCATACCTATGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CAGGCCAGCTGTTTTACATTCCAGGAGGTAGGGCTGTGTGAGCATTTGGTTCAGCAGCATTCCAGCTCCTaGGGGTGGCTGGGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: QASCFTFQEVGLCEHLVQQHSSS*GWLGAG
Trigger: GCCAGCACCCAGCCACCCCCAGGAGCTGGAATGCTG...CTGAACCAAATGCTCACACAGCCCTACCTCCTGGAATGTAAAACAGCTGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCACTGCACCTCCAAGATaGGGCTGTCTTGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: HGEEQAQKCWVPYSQLPATAPPR*GCLGPA
Trigger: TGCAGGCCCAAGACAGCCCCATCTTGGAGGTGCAGT...GGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp GGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACATACATCACCCTGAGTaGAGTGGCCTCTGGATGGCC +
Preference number: 4 (lower is better)
Translates to: GEEQAQKCWVPYSQLPAHIHHPE*SGLWMA
Trigger: GGCCATCCAGAGGCCACTCCACTCAGGGTGATGTAT...GTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCTCAGGGAAGGCGCTGTaGTGTTCTATGCACTCGCGG +
Preference number: 4 (lower is better)
Translates to: HGEEQAQKCWVPYSQLPASGKAL*CSMHSR
Trigger: CCGCGAGTGCATAGAACACCACAGCGCCTTCCCTGA...GGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTGCTGGGTCTGGTGTGTaGGCCTTCAGGCCATGCTCT +
Preference number: 4 (lower is better)
Translates to: SWEKGADLQLFPLHSSPSAGSGV*AFRPCS
Trigger: AGAGCATGGCCTGAAGGCCCACACACCAGACCCAGC...ACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGCCCCAGATGTCCTGGTGTATATTTCACTTGCAGCAACTCTGACCTCGGCGGGAGGTTGCAGGCACCCTaGGGGTCCACAGTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: SPRCPGVYFTCSNSDLGGRLQAP*GSTVKV
Trigger: GACCTTCACTGTGGACCCCCAGGGTGCCTGCAACCT...CCCGCCGAGGTCAGAGTTGCTGCAAGTGAAATATACACCAGGACATCTGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CCCAGAAAAGCAAAGGGAGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCTCAGTGTTCGAGTGGTaGCACAGGTGCAGGGACAGA +
Preference number: 4 (lower is better)
Translates to: PRKAKGVGRKGPTSSSFPSVFEW*HRCRDR
Trigger: TCTGTCCCTGCACCTGTGCCACCACTCGAACACTGA...GGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACTCCCTTTGCTTTTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp GGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACGTGGTAAAGGCAGCTTaGACGCCTGCACCGAGTACA +
Preference number: 4 (lower is better)
Translates to: GEEQAQKCWVPYSQLPAHVVKAA*TPAPST
Trigger: TGTACTCGGTGCAGGCGTCCAAGCTGCCTTTACCAC...GTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp GGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACCCCTGCAACTGCCCCTaGGATGTGTCCCAAGAGATA +
Preference number: 4 (lower is better)
Translates to: GEEQAQKCWVPYSQLPAHPCNCP*DVSQEI
Trigger: TATCTCTTGGGACACATCCCAGGGGCAGTTGCAGGG...GTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AGCCCCAGATGTCCTGGTGTATATTTCACTTGCAGCAACTCTGACCTCGGCGGGACGGGGGACAGCACGTaGAGCAGATGGCACAGAGTA +
Preference number: 4 (lower is better)
Translates to: SPRCPGVYFTCSNSDLGGTGDST*SRWHRV
Trigger: TACTCTGTGCCATCTGCTTCACGTGCTGTCCCCCGT...CCCGCCGAGGTCAGAGTTGCTGCAAGTGAAATATACACCAGGACATCTGGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp CTGGGGTCCTCTGTGACCACTAAGAGGTGTCCCAGTCATCAAATGCCCCAGAAAGTGGTGGGTGGCAAGTaGCAGACACTCCACGGATGG +
Preference number: 4 (lower is better)
Translates to: LGSSVTTKRCPSHQMPQKVVGGK*QTLHGW
Trigger: CCATCCGTGGAGTGTCTGTCACTTGCCACCCACCAC...TTTCTGGGGCATTTGATGACTGGGACACCTCTTAGTGGTCACAGAGGACCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp CCCAGAAAAGCAAAGGGAGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCCTCAACAGGAAGCCCTaGTCAGTGTCTGGCAACAGA +
Preference number: 4 (lower is better)
Translates to: PRKAKGVGRKGPTSSSFPLNRKP*SVSGNR
Trigger: TCTGTTGCCAGACACTGATCAGGGCTTCCTGTTGAG...GGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACTCCCTTTGCTTTTCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTAGTGCATCCACTGCCTaGTGCCAGAACCGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: SWEKGADLQLFPLHSSPSSASTA*CQNRKV
Trigger: GACCTTCCGGTTCTGGCATCAGGCAGTGGATGCACT...ACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp GGACATAGGTATGGAAGCATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTGTGATTGCCACGAAATaGGGGTGGGGTGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GHRYGSMVKNRPRSAGYLVIATK*GWGGPG
Trigger: CCCTGGCCCACCCCACCCTCATTTCGTGGCAATCAC...AAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATGCTTCCATACCTATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp CCCAGAAAAGCAAAGGGAGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCGGGCTGCCTCATCGATaGAAATGTGGGAGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: PRKAKGVGRKGPTSSSFPGLPHR*KCGRRS
Trigger: GCTTCTTCTCCCACATTTTCATCGATGAGGCAGCCC...GGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACTCCCTTTGCTTTTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp GGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACGTACTCGAGGCTCAGTaGAGAACTCTGAGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: GEEQAQKCWVPYSQLPAHVLEAQ*RTLRLV
Trigger: CACCAACCTCAGAGTTCTTCACTGAGCCTCGAGTAC...GTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp GGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACTGTACTCTTGGACCATaGTGTGAGCTGTGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: GEEQAQKCWVPYSQLPAHCTLGP*CELCGS
Trigger: GCTTCCGCACAGCTCACATCATGGTCCAAGAGTACA...GTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp CATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCAAGCCCAGCTTGTTTTaGGGCTGGCTCTTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: HGEEQAQKCWVPYSQLPAKPSLF*GWLLSW
Trigger: CCAGCTCAAGAGCCAGCCTCAAAACAAGCTGGGCTT...GGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTCTGGTGCACATGGCTTaGAAAGCAGTCACCTGGCCG +
Preference number: 4 (lower is better)
Translates to: SWEKGADLQLFPLHSSPSLVHMA*KAVTWP
Trigger: CGGCCAGGTGACTGCTTTTCAAGCCATGTGCACCAG...ACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp CAGGCCAGCTGTTTTACATTCCAGGAGGTAGGGCTGTGTGAGCATTTGGTTCAGTCTGCAGAGCGCTCCTaGCAGCCCTGTCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: QASCFTFQEVGLCEHLVQSAERS*QPCPGS
Trigger: AGAGCCAGGACAGGGCTGTCAGGAGCGCTCTGCAGA...CTGAACCAAATGCTCACACAGCCCTACCTCCTGGAATGTAAAACAGCTGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000108831.8
CDS-3UTR TCA 90 bp GGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACCATCTGCTCCTGGTTTaGCCTGTGGAACCAGTACAC +
Preference number: 4 (lower is better)
Translates to: GEEQAQKCWVPYSQLPAHHLLLV*PVEPVH
Trigger: GTGTACTGGTTCCACAGGTCAAACCAGGAGCAGATG...GTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp CATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCGACACCAGGCTGTGTTaGGCCTCACAGAAGTCTAGG +
Preference number: 4 (lower is better)
Translates to: HGEEQAQKCWVPYSQLPADTRLC*ASQKSR
Trigger: CCTAGACTTCTGTGAGGCTCAACACAGCCTGGTGTC...GGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp GGACATAGGTATGGAAGCATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTGCCACCATCTGTGCGTaGTCCAGGGAGGAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: GHRYGSMVKNRPRSAGYLATICA*SREEQW
Trigger: CCACTGCTCCTCCCTGGAGCACGCACAGATGGTGGC...AAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATGCTTCCATACCTATGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp CCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACAGGCCAGCTGTTTTGCTGGTGTCTCCAGTaGTGTCTTCAGGGATACCTG +
Preference number: 4 (lower is better)
Translates to: PRSAGYLIPSCLPTGQLFCWCLQ*CLQGYL
Trigger: CAGGTATCCCTGAAGACAGCACTGGAGACACCAGCA...AAACAGCTGGCCTGTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp CATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCCAATGTGTACGTCTTaGCGGTGCCAAAGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: HGEEQAQKCWVPYSQLPAPMCTS*RCQRGH
Trigger: ATGGCCCCTTTGGCACCGGCAAGACGTACACATTGG...GGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp CATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCGTCATGGACATGTCCTaGTCAGGGCTTCCTGCCACA +
Preference number: 4 (lower is better)
Translates to: HGEEQAQKCWVPYSQLPAVMDMS*SGLPAT
Trigger: TGTGGCAGGAAGCCCTGAGCAGGACATGTCCATGAC...GGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTAAGGTGCCCTGCAACTaGCCCTGGGATGTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: SWEKGADLQLFPLHSSPSKVPCN*PWDVSQ
Trigger: TTGGGACACATCCCAGGGGCAGTTGCAGGGCACCTT...ACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CAGGCCAGCTGTTTTACATTCCAGGAGGTAGGGCTGTGTGAGCATTTGGTTCAGCTCTCATTGAGGCACTaGGTGCAGCGGGAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: QASCFTFQEVGLCEHLVQLSLRH*VQREQP
Trigger: GGGCTGCTCCCGCTGCACCCAGTGCCTCAATGAGAG...CTGAACCAAATGCTCACACAGCCCTACCTCCTGGAATGTAAAACAGCTGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CCCAGAAAAGCAAAGGGAGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCCAGAGTAGTTGGAAGTaGCCACCAAACTCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: PRKAKGVGRKGPTSSSFPQSSWK*PPNSAR
Trigger: CCGAGCAGAGTTTGGTGGCCACTTCCAACTACTCTG...GGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACTCCCTTTGCTTTTCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGGTGTGGTGGGAGACTaGGGGCCACCAGTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: RGRPPALSPPFKSKYKQEGVVGD*GPPVRK
Trigger: CTTTCTCACTGGTGGCCCCCAGTCTCCCACCACACC...TTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGCTCCTGGGGGTGGCTaGGTGCTGGCTTCCCATTTA +
Preference number: 4 (lower is better)
Translates to: RGRPPALSPPFKSKYKQEAPGGG*VLASHL
Trigger: TAAATGGGAAGCCAGCACCCAGCCACCCCCAGGAGC...TTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACAGGCCAGCTGTTTGCCATAGATGAGCAGTaGTGGGATGTGCTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: PRSAGYLIPSCLPTGQLFAIDEQ*WDVLCA
Trigger: GGCACAAAGCACATCCCACCACTGCTCATCTATGGC...AAACAGCTGGCCTGTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp GTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCCCCAGCTCTGGGCCTGTaGGTGGGCGAAAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: VQTGRSSLLSLLPAQEAAPALGL*VGERPG
Trigger: GCCAGGCCTTTCGCCCACCCACAGGCCCAGAGCTGG...GGCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTGTGATGTACCAGCTCTaGGCCTGTGGGTGGGCGAAA +
Preference number: 4 (lower is better)
Translates to: SWEKGADLQLFPLHSSPSVMYQL*ACGWAK
Trigger: TTTCGCCCACCCACAGGCCCAGAGCTGGTACATCAC...ACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp GGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACCAAGGCATAGGAGAGTaGGATAAGGGCCTCACACTC +
Preference number: 4 (lower is better)
Translates to: GEEQAQKCWVPYSQLPAHQGIGE*DKGLTL
Trigger: GAGTGTGAGGCCCTTATCCCACTCTCCTATGCCTTG...GTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGCCCCAGATGTCCTGGTGTATATTTCACTTGCAGCAACTCTGACCTCGGCGGGCTCTCGGGCCTTCTGTaGTGCAGAGCAAACCACGGT +
Preference number: 4 (lower is better)
Translates to: SPRCPGVYFTCSNSDLGGLSGLL*CRANHG
Trigger: ACCGTGGTTTGCTCTGCACCACAGAAGGCCCGAGAG...CCCGCCGAGGTCAGAGTTGCTGCAAGTGAAATATACACCAGGACATCTGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CTGGGGTCCTCTGTGACCACTAAGAGGTGTCCCAGTCATCAAATGCCCCAGAAAAGGTTGCAGGCACCCTaGGGGTCCACAGTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: LGSSVTTKRCPSHQMPQKRLQAP*GSTVKV
Trigger: GACCTTCACTGTGGACCCCCAGGGTGCCTGCAACCT...TTTCTGGGGCATTTGATGACTGGGACACCTCTTAGTGGTCACAGAGGACCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCGCCACTCACTCCCCTaGCTCTTGGTAATAGAGGTC +
Preference number: 4 (lower is better)
Translates to: HGEEQAQKCWVPYSQLPARHSLP*LLVIEV
Trigger: GACCTCTATTACCAAGAGCCAGGGGAGTGAGTGGCG...GGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTTCTCTGCTGCTTGCTTaGAGCGGGCCAGCAAGATCT +
Preference number: 4 (lower is better)
Translates to: SWEKGADLQLFPLHSSPSSLLLA*SGPARS
Trigger: AGATCTTGCTGGCCCGCTTCAAGCAAGCAGCAGAGA...ACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AGCCCCAGATGTCCTGGTGTATATTTCACTTGCAGCAACTCTGACCTCGGCGGGTCTCTGCTGCTTGCTTaGAGCGGGCCAGCAAGATCT +
Preference number: 4 (lower is better)
Translates to: SPRCPGVYFTCSNSDLGGSLLLA*SGPARS
Trigger: AGATCTTGCTGGCCCGCTTCAAGCAAGCAGCAGAGA...CCCGCCGAGGTCAGAGTTGCTGCAAGTGAAATATACACCAGGACATCTGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AGGAGGTTCTGCAGCCAGGCCTTAGAAGCCCCAGATGTCCTGGTGTATATTTCACCACAAGGGCTGTGCTaGCTGCTCGGCTCAACAGGA +
Preference number: 4 (lower is better)
Translates to: RRFCSQALEAPDVLVYISPQGLC*LLGSTG
Trigger: TCCTGTTGAGCCGAGCAGTCAGCACAGCCCTTGTGG...TGAAATATACACCAGGACATCTGGGGCTTCTAAGGCCTGGCTGCAGAACCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AGCCCCAGATGTCCTGGTGTATATTTCACTTGCAGCAACTCTGACCTCGGCGGGCAAAGGGGCCATAGATaGGCAGTGGTGGGATGTGCT +
Preference number: 4 (lower is better)
Translates to: SPRCPGVYFTCSNSDLGGQRGHR*AVVGCA
Trigger: AGCACATCCCACCACTGCTCATCTATGGCCCCTTTG...CCCGCCGAGGTCAGAGTTGCTGCAAGTGAAATATACACCAGGACATCTGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp CTGGGGTCCTCTGTGACCACTAAGAGGTGTCCCAGTCATCAAATGCCCCAGAAATGGTGTGTGTGCAGATaGGCACCTTGGTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: LGSSVTTKRCPSHQMPQKWCVCR*APWCGA
Trigger: AGCCCCACACCAAGGTGCTCATCTGCACACACACCA...TTTCTGGGGCATTTGATGACTGGGACACCTCTTAGTGGTCACAGAGGACCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp CTGGGGTCCTCTGTGACCACTAAGAGGTGTCCCAGTCATCAAATGCCCCAGAAACAGAGCCTTGGAAACTaGGGCTGGGTCTGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LGSSVTTKRCPSHQMPQKQSLGN*GWVWCV
Trigger: CACACACCAGACCCAGCCTCAGTTTCCAAGGCTCTG...TTTCTGGGGCATTTGATGACTGGGACACCTCTTAGTGGTCACAGAGGACCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp CAGGCCAGCTGTTTTACATTCCAGGAGGTAGGGCTGTGTGAGCATTTGGTTCAGAGCTGGCGGGCAGCATaGGTACTGGCTCCCTATTGG +
Preference number: 4 (lower is better)
Translates to: QASCFTFQEVGLCEHLVQSWRAA*VLAPYW
Trigger: CCAATAGGGAGCCAGTACTCATGCTGCCCGCCAGCT...CTGAACCAAATGCTCACACAGCCCTACCTCCTGGAATGTAAAACAGCTGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp CAGGCCAGCTGTTTTACATTCCAGGAGGTAGGGCTGTGTGAGCATTTGGTTCAGGACCAGGGAGAAGGCTaGGTGCATCCTGGCACAAGC +
Preference number: 4 (lower is better)
Translates to: QASCFTFQEVGLCEHLVQDQGEG*VHPGTS
Trigger: GCTTGTGCCAGGATGCACTCAGCCTTCTCCCTGGTC...CTGAACCAAATGCTCACACAGCCCTACCTCCTGGAATGTAAAACAGCTGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp CAGGCCAGCTGTTTTACATTCCAGGAGGTAGGGCTGTGTGAGCATTTGGTTCAGATGGCGAGGCGATCCTaGCCAGGGAGAAGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: QASCFTFQEVGLCEHLVQMARRS*PGRRLS
Trigger: ACTCAGCCTTCTCCCTGGTCAGGATCGCCTCGCCAT...CTGAACCAAATGCTCACACAGCCCTACCTCCTGGAATGTAAAACAGCTGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp CATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCTGTACTCTTGGACCATaGTGTGAGCTGTGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: HGEEQAQKCWVPYSQLPACTLGP*CELCGS
Trigger: GCTTCCGCACAGCTCACATCATGGTCCAAGAGTACA...GGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp CATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCAGCCCAGAAACTTCTTaGGCCAGCTCTTTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: HGEEQAQKCWVPYSQLPASPETS*ASSLLA
Trigger: GGCCAACAAAGAGCTGGCTCAAGAAGTTTCTGGGCT...GGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp CTGGGGTCCTCTGTGACCACTAAGAGGTGTCCCAGTCATCAAATGCCCCAGAAATCCCTGGGGCAGGTGTaGTCTACCTCACGCAGAATG +
Preference number: 4 (lower is better)
Translates to: LGSSVTTKRCPSHQMPQKSLGQV*STSRRM
Trigger: CATTCTGCGTGAGGTAGAGCACACCTGCCCCAGGGA...TTTCTGGGGCATTTGATGACTGGGACACCTCTTAGTGGTCACAGAGGACCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp CTGGGGTCCTCTGTGACCACTAAGAGGTGTCCCAGTCATCAAATGCCCCAGAAAAAAGGCCACCATCTGTaGGTGCTCCAGGGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LGSSVTTKRCPSHQMPQKKGHHL*VLQGGA
Trigger: TGCTCCTCCCTGGAGCACGCACAGATGGTGGCCTTT...TTTCTGGGGCATTTGATGACTGGGACACCTCTTAGTGGTCACAGAGGACCCCAG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp CCCAGAAAAGCAAAGGGAGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCTGTGTCTGGCCTAGCTaGAACTTCAGCTTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: PRKAKGVGRKGPTSSSFPCVWPS*NFSFWR
Trigger: TCTCCAGAAGCTGAAGTTGCAGCTAGGCCAGACACA...GGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACTCCCTTTGCTTTTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp CCCAGAAAAGCAAAGGGAGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCGCTTCTGTTTGTGATTaGCACGAAATGAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PRKAKGVGRKGPTSSSFPASVCD*HEMRVG
Trigger: CCCCACCCTCATTTCGTGGCAATCACAAACAGAAGC...GGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACTCCCTTTGCTTTTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGCCCCAGATGTCCTGGTGTATATTTCACTTGCAGCAACTCTGACCTCGGCGGGAGCAGTGGTGGGATGTaGTTTGTGCCCTCGGGTCTT +
Preference number: 4 (lower is better)
Translates to: SPRCPGVYFTCSNSDLGGSSGGM*FVPSGL
Trigger: AAGACCCGAGGGCACAAAGCACATCCCACCACTGCT...CCCGCCGAGGTCAGAGTTGCTGCAAGTGAAATATACACCAGGACATCTGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTCCAATGTGTACGTCTTaGCGGTGCCAAAGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: SWEKGADLQLFPLHSSPSPMCTS*RCQRGH
Trigger: ATGGCCCCTTTGGCACCGGCAAGACGTACACATTGG...ACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTTCTCCTGTAGGAAGCTaGAGCGGCGGAATTGCTTGG +
Preference number: 4 (lower is better)
Translates to: SWEKGADLQLFPLHSSPSSPVGS*SGGIAW
Trigger: CCAAGCAATTCCGCCGCTGCAGCTTCCTACAGGAGA...ACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGCCCCAGATGTCCTGGTGTATATTTCACTTGCAGCAACTCTGACCTCGGCGGGCTCATCCCCCGTGAATaGCATCCCACAGTTCAGACG +
Preference number: 4 (lower is better)
Translates to: SPRCPGVYFTCSNSDLGGLIPRE*HPTVQT
Trigger: CGTCTGAACTGTGGGATGGCATTCACGGGGGATGAG...CCCGCCGAGGTCAGAGTTGCTGCAAGTGAAATATACACCAGGACATCTGGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp CCCAGAAAAGCAAAGGGAGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCGGAGCCAGTGAAGGGTaGATGTCATCTGCAGCAATA +
Preference number: 4 (lower is better)
Translates to: PRKAKGVGRKGPTSSSFPGASEG*MSSAAI
Trigger: TATTGCTGCAGATGACATGCACCCTTCACTGGCTCC...GGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACTCCCTTTGCTTTTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTGCACTGCTTCTTCCTTaGGGAGGTCAGGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SWEKGADLQLFPLHSSPSALLLP*GGQEAA
Trigger: AGCAGCTTCCTGACCTCCGCAAGGAAGAAGCAGTGC...ACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGCCCCAGATGTCCTGGTGTATATTTCACTTGCAGCAACTCTGACCTCGGCGGGACCACAGGCCGAAGCTaGTTGTGGTCTCCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: SPRCPGVYFTCSNSDLGGTTGRS*LWSPSR
Trigger: TCTGCTTGGAGACCACAAGCAGCTTCGGCCTGTGGT...CCCGCCGAGGTCAGAGTTGCTGCAAGTGAAATATACACCAGGACATCTGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGGAGGTTCTGCAGCCAGGCCTTAGAAGCCCCAGATGTCCTGGTGTATATTTCAGCCTATCTGGGGCTCTaGTGCCCTGCACAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: RRFCSQALEAPDVLVYISAYLGL*CPAQPL
Trigger: AAGAGGCTGTGCAGGGCACCAGAGCCCCAGATAGGC...TGAAATATACACCAGGACATCTGGGGCTTCTAAGGCCTGGCTGCAGAACCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGCCCCAGATGTCCTGGTGTATATTTCACTTGCAGCAACTCTGACCTCGGCGGGAGGATGTCTTCTTTGTaGCAGTGGCCGCACCTCCAC +
Preference number: 4 (lower is better)
Translates to: SPRCPGVYFTCSNSDLGGRMSSL*QWPHLH
Trigger: GTGGAGGTGCGGCCACTGCCACAAAGAAGACATCCT...CCCGCCGAGGTCAGAGTTGCTGCAAGTGAAATATACACCAGGACATCTGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp TGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGGCTGGGGCGCATGGTCTGAACTaGCCCGTGCCTCCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: WHRRMRDIPSVDGTSKAGAHGLN*PVPPAA
Trigger: TGCGGCTGGAGGCACGGGCCAGTTCAGACCATGCGC...CCCAGCCTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CCCAGAAAAGCAAAGGGAGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCTCATCGATGAAAATGTaGGAGAAGAAGCCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: PRKAKGVGRKGPTSSSFPSSMKM*EKKPAG
Trigger: GCCAGCGGGCTTCTTCTCCCACATTTTCATCGATGA...GGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACTCCCTTTGCTTTTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGCCCCAGATGTCCTGGTGTATATTTCACTTGCAGCAACTCTGACCTCGGCGGGGCTGCTTACCCTGGCTaGAGCGACCAAAAACAGAGC +
Preference number: 4 (lower is better)
Translates to: SPRCPGVYFTCSNSDLGGAAYPG*SDQKQS
Trigger: GCTCTGTTTTTGGTCGCTCCAGCCAGGGTAAGCAGC...CCCGCCGAGGTCAGAGTTGCTGCAAGTGAAATATACACCAGGACATCTGGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp GTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCCAGCCGCACGCCTGTCTaGCTCACTAGCTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: VQTGRSSLLSLLPAQEAASRTPV*LTSSWG
Trigger: CCCCCAGGAGCTAGTGAGCCAGACAGGCGTGCGGCT...GGCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACAGGCCAGCTGTTTAGAGCCTGGTGCACATaGCTTGAAAAGCAGTCACCT +
Preference number: 4 (lower is better)
Translates to: PRSAGYLIPSCLPTGQLFRAWCT*LEKQSP
Trigger: AGGTGACTGCTTTTCAAGCCATGTGCACCAGGCTCT...AAACAGCTGGCCTGTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTTCATCCACATTCTCCTaGTCCCAGTCACCACCAGCC +
Preference number: 4 (lower is better)
Translates to: SWEKGADLQLFPLHSSPSSSTFS*SQSPPA
Trigger: GGCTGGTGGTGACTGGGACCAGGAGAATGTGGATGA...ACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CAGGCCAGCTGTTTTACATTCCAGGAGGTAGGGCTGTGTGAGCATTTGGTTCAGGCAGCGGGAATTCAGTaGCCTCTGCCTGCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: QASCFTFQEVGLCEHLVQAAGIQ*PLPAPH
Trigger: ATGGGGAGCAGGCAGAGGCCACTGAATTCCCGCTGC...CTGAACCAAATGCTCACACAGCCCTACCTCCTGGAATGTAAAACAGCTGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGGCCGAAGCTGCTTGTaGTCTCCAAGCAGAACCACC +
Preference number: 4 (lower is better)
Translates to: RGRPPALSPPFKSKYKQEGRSCL*SPSRTT
Trigger: GGTGGTTCTGCTTGGAGACCACAAGCAGCTTCGGCC...TTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp CATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCGGGGAAGGTTGTTCTTaGGCTCAAATGTCCAGACCA +
Preference number: 4 (lower is better)
Translates to: HGEEQAQKCWVPYSQLPAGEGCS*AQMSRP
Trigger: TGGTCTGGACATTTGAGCTCAAGAACAACCTTCCCC...GGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AGGAGGTTCTGCAGCCAGGCCTTAGAAGCCCCAGATGTCCTGGTGTATATTTCAACGGGGGACAGCACGTaGAGCAGATGGCACAGAGTA +
Preference number: 4 (lower is better)
Translates to: RRFCSQALEAPDVLVYISTGDST*SRWHRV
Trigger: TACTCTGTGCCATCTGCTTCACGTGCTGTCCCCCGT...TGAAATATACACCAGGACATCTGGGGCTTCTAAGGCCTGGCTGCAGAACCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAACAGTCCGGAACAATCTaGTTGAACTCCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RGRPPALSPPFKSKYKQEQSGTI*LNSRAR
Trigger: CCTGGCCCTGGAGTTCAATCAGATTGTTCCGGACTG...TTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp CAGGCCAGCTGTTTTACATTCCAGGAGGTAGGGCTGTGTGAGCATTTGGTTCAGCTCAGTGAAGAACTCTaGGGTTGGTGCCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: QASCFTFQEVGLCEHLVQLSEEL*GWCPWA
Trigger: AGCCCAGGGGCACCAACCTCAGAGTTCTTCACTGAG...CTGAACCAAATGCTCACACAGCCCTACCTCCTGGAATGTAAAACAGCTGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AGTGAGCATATAAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGCCCACAGCCACCAGCTaGGACTGGGCACGAGTCATG +
Preference number: 4 (lower is better)
Translates to: SEHIRGRHAGRDFTCLVQPTATS*DWARVM
Trigger: CATGACTCGTGCCCAGTCTCAGCTGGTGGCTGTGGG...CTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTTATATGCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp CTGGGGTCCTCTGTGACCACTAAGAGGTGTCCCAGTCATCAAATGCCCCAGAAACTCAATCTGTTCCAGTaGCAGCTCCTCAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LGSSVTTKRCPSHQMPQKLNLFQ*QLLREG
Trigger: GCCTTCCCTGAGGAGCTGTCACTGGAACAGATTGAG...TTTCTGGGGCATTTGATGACTGGGACACCTCTTAGTGGTCACAGAGGACCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp GTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCCCGCTGCACCTGGCCTTaGATGAGGCGGTGGATGGGA +
Preference number: 4 (lower is better)
Translates to: VQTGRSSLLSLLPAQEAARCTWP*MRRWMG
Trigger: TCCCATCCACCGCCTCATTCAAGGCCAGGTGCAGCG...GGCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAAGGCTGGAACCAAGCTaGACCTGCAGGGTATCTCCA +
Preference number: 4 (lower is better)
Translates to: RGRPPALSPPFKSKYKQERLEPS*TCRVSP
Trigger: TGGAGATACCCTGCAGGTTCAGCTTGGTTCCAGCCT...TTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp TGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGGCTGGGTGGCCCCCAGGCACCTaGGTACTCGCCGACTTGAAG +
Preference number: 4 (lower is better)
Translates to: WHRRMRDIPSVDGTSKAGWPPGT*VLADLK
Trigger: CTTCAAGTCGGCGAGTACTCAGGTGCCTGGGGGCCA...CCCAGCCTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp CCCAGAAAAGCAAAGGGAGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCTTTGGTCTTCCTTCCTaGGAGGTCTTGCCAAACAGA +
Preference number: 4 (lower is better)
Translates to: PRKAKGVGRKGPTSSSFPFGLPS*EVLPNR
Trigger: TCTGTTTGGCAAGACCTCTCAGGAAGGAAGACCAAA...GGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACTCCCTTTGCTTTTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAATATCTGGGGCTCTGGTaGCCTGCACAGCCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: RGRPPALSPPFKSKYKQEYLGLW*PAQPLS
Trigger: TGAAAGAGGCTGTGCAGGGCACCAGAGCCCCAGATA...TTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp GGACATAGGTATGGAAGCATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTGTGGGGCAGATTTGGTaGTTAGGGCAATGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: GHRYGSMVKNRPRSAGYLVGQIW*LGQWPL
Trigger: CAGGGGCCATTGCCCTAAGCACCAAATCTGCCCCAC...AAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATGCTTCCATACCTATGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp TGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGGCTGGGGCCACCATCTGTGCGTaGTCCAGGGAGGAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: WHRRMRDIPSVDGTSKAGATICA*SREEQW
Trigger: CCACTGCTCCTCCCTGGAGCACGCACAGATGGTGGC...CCCAGCCTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp GGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACTCACTGATACTTCTTTaGTGCTGCGCTGGTATTCCG +
Preference number: 4 (lower is better)
Translates to: GEEQAQKCWVPYSQLPAHSLILL*CCAGIP
Trigger: CGGAATACCAGCGCAGCAGCAAAGAAGTATCAGTGA...GTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp GGACATAGGTATGGAAGCATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTAAGGGCTGTGCTGACTaGTCGGCTCAACAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: GHRYGSMVKNRPRSAGYLKGCAD*SAQQEA
Trigger: GGCTTCCTGTTGAGCCGAGCAGTCAGCACAGCCCTT...AAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATGCTTCCATACCTATGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp GGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACCTCCAGCATTTGGGCTaGCTCATCGATGAAAATGTG +
Preference number: 4 (lower is better)
Translates to: GEEQAQKCWVPYSQLPAHLQHLG*LIDENV
Trigger: CACATTTTCATCGATGAGGCAGCCCAAATGCTGGAG...GTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGTCATGGACATGTCCTaGTCAGGGCTTCCTGCCACA +
Preference number: 4 (lower is better)
Translates to: RGRPPALSPPFKSKYKQEVMDMS*SGLPAT
Trigger: TGTGGCAGGAAGCCCTGAGCAGGACATGTCCATGAC...TTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp TCTTTCTCTCGGGAATGTTTCCTTGCCCACTCTGAGAGTGCCTGTAAGAGATCTGAGCGTCGTCAAGGTTaGAGGCACCCTGGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: SFSRECFLAHSESACKRSERRQG*RHPGGP
Trigger: TGGACCCCCAGGGTGCCTGCAACCTTGACGACGCTC...AGATCTCTTACAGGCACTCTCAGAGTGGGCAAGGAAACATTCCCGAGAGAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp CTGGGGTCCTCTGTGACCACTAAGAGGTGTCCCAGTCATCAAATGCCCCAGAAACTCAGTGGCCATGCCTaGCTCGTCGATAAGGATCTG +
Preference number: 4 (lower is better)
Translates to: LGSSVTTKRCPSHQMPQKLSGHA*LVDKDL
Trigger: CAGATCCTTATCGACGAGGCAGGCATGGCCACTGAG...TTTCTGGGGCATTTGATGACTGGGACACCTCTTAGTGGTCACAGAGGACCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CAGGCCAGCTGTTTTACATTCCAGGAGGTAGGGCTGTGTGAGCATTTGGTTCAGCCCTGGCTGTGTGTCTaGCCTAGCTGCAACTTCAGC +
Preference number: 4 (lower is better)
Translates to: QASCFTFQEVGLCEHLVQPWLCV*PSCNFS
Trigger: GCTGAAGTTGCAGCTAGGCCAGACACACAGCCAGGG...CTGAACCAAATGCTCACACAGCCCTACCTCCTGGAATGTAAAACAGCTGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp TACAGGGTGCCCAGTGCAACCATAGATAGATCTCAGTGTCAAAGTGTAGTCTCATCCAGCTCCTGGGGGTaGCTGGGTGCTGGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: YRVPSATIDRSQCQSVVSSSSWG*LGAGFP
Trigger: TGGGAAGCCAGCACCCAGCCACCCCCAGGAGCTGGA...TGAGACTACACTTTGACACTGAGATCTATCTATGGTTGCACTGGGCACCCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CTGGGGTCCTCTGTGACCACTAAGAGGTGTCCCAGTCATCAAATGCCCCAGAAAGAGCATGCCGAGTGCTaGTGTCTCCAGTGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: LGSSVTTKRCPSHQMPQKEHAEC*CLQCCL
Trigger: AAGACAGCACTGGAGACACCAGCACTCGGCATGCTC...TTTCTGGGGCATTTGATGACTGGGACACCTCTTAGTGGTCACAGAGGACCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAATACATCACCCTGAGTaGAGTGGCCTCTGGATGGCC +
Preference number: 4 (lower is better)
Translates to: RGRPPALSPPFKSKYKQEIHHPE*SGLWMA
Trigger: GGCCATCCAGAGGCCACTCCACTCAGGGTGATGTAT...TTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCTCATCGATGAAAATGTaGGAGAAGAAGCCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: HGEEQAQKCWVPYSQLPASSMKM*EKKPAG
Trigger: GCCAGCGGGCTTCTTCTCCCACATTTTCATCGATGA...GGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGCCCCAGATGTCCTGGTGTATATTTCACTTGCAGCAACTCTGACCTCGGCGGGCAAGGCATAGGAGAGTaGGATAAGGGCCTCACACTC +
Preference number: 4 (lower is better)
Translates to: SPRCPGVYFTCSNSDLGGQGIGE*DKGLTL
Trigger: GAGTGTGAGGCCCTTATCCCACTCTCCTATGCCTTG...CCCGCCGAGGTCAGAGTTGCTGCAAGTGAAATATACACCAGGACATCTGGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp GGACATAGGTATGGAAGCATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTGGGCTGCCACCTGAGTaGTGTGAGTGTCTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: GHRYGSMVKNRPRSAGYLGLPPE*CECLCV
Trigger: CACACACAGACACTCACACCACTCAGGTGGCAGCCC...AAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATGCTTCCATACCTATGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGCCCCAGATGTCCTGGTGTATATTTCACTTGCAGCAACTCTGACCTCGGCGGGCTGTGTGACTTCCTCTaGGTTGGCCCTAGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: SPRCPGVYFTCSNSDLGGLCDFL*VGPRVL
Trigger: GAGAACTCTAGGGCCAACCCAGAGGAAGTCACACAG...CCCGCCGAGGTCAGAGTTGCTGCAAGTGAAATATACACCAGGACATCTGGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGAGCCAGCTCTTTGTTaGCCGCTGGTCCACATCACT +
Preference number: 4 (lower is better)
Translates to: RGRPPALSPPFKSKYKQEEPALC*PLVHIT
Trigger: AGTGATGTGGACCAGCGGCCAACAAAGAGCTGGCTC...TTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCATGCACAACGCCTCCTaGGCCCGGGTGATGGCCACG +
Preference number: 4 (lower is better)
Translates to: STNRKVIIIKPASSTGSSMHNAS*ARVMAT
Trigger: CGTGGCCATCACCCGGGCCCAGGAGGCGTTGTGCAT...GCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp CCCAGAAAAGCAAAGGGAGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCCAAAGAGAGGATATGTaGGCAGATCTCCTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: PRKAKGVGRKGPTSSSFPQREDM*ADLLSE
Trigger: TTCAGAGAGGAGATCTGCTCACATATCCTCTCTTTG...GGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACTCCCTTTGCTTTTCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp CTGGGGTCCTCTGTGACCACTAAGAGGTGTCCCAGTCATCAAATGCCCCAGAAACTTGAGAATTACAGGTaGCCAGGCAGGCATGGCAGT +
Preference number: 4 (lower is better)
Translates to: LGSSVTTKRCPSHQMPQKLENYR*PGRHGS
Trigger: ACTGCCATGCCTGCCTGGTCACCTGTAATTCTCAAG...TTTCTGGGGCATTTGATGACTGGGACACCTCTTAGTGGTCACAGAGGACCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGGTCTCAGCCATCACTaGTACTTCTTTGCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: RGRPPALSPPFKSKYKQEGLSHH*YFFAAA
Trigger: CGCAGCAGCAAAGAAGTATCAGTGATGGCTGAGACC...TTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp CAGGCCAGCTGTTTTACATTCCAGGAGGTAGGGCTGTGTGAGCATTTGGTTCAGGCTGCTCCAGGCTCTTaGTTGAGTAGGGCCACATGT +
Preference number: 4 (lower is better)
Translates to: QASCFTFQEVGLCEHLVQAAPGS*LSRATC
Trigger: ACATGTGGCCCTACTCAATCAAGAGCCTGGAGCAGC...CTGAACCAAATGCTCACACAGCCCTACCTCCTGGAATGTAAAACAGCTGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGTAGAAAAGGATACTGGGGGCCACCAGTaGGAAAGCTGCTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: KRETCWERFHLLSPVEKDTGGHQ*ESCSRL
Trigger: GAGCCTGGAGCAGCTTTCTCACTGGTGGCCCCCAGT...ATCCTTTTCTACTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp TCTTTCTCTCGGGAATGTTTCCTTGCCCACTCTGAGAGTGCCTGTAAGAGATCTCCACAAGGGCTGTGCTaGCTGCTCGGCTCAACAGGA +
Preference number: 4 (lower is better)
Translates to: SFSRECFLAHSESACKRSPQGLC*LLGSTG
Trigger: TCCTGTTGAGCCGAGCAGTCAGCACAGCCCTTGTGG...AGATCTCTTACAGGCACTCTCAGAGTGGGCAAGGAAACATTCCCGAGAGAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp CAGGCCAGCTGTTTTACATTCCAGGAGGTAGGGCTGTGTGAGCATTTGGTTCAGCCACATGGCAGAACATaGGAGGGTAGTGTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: QASCFTFQEVGLCEHLVQPHGRT*EGSVGG
Trigger: ACCCCCAACACTACCCTCTCATGTTCTGCCATGTGG...CTGAACCAAATGCTCACACAGCCCTACCTCCTGGAATGTAAAACAGCTGGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp GGACATAGGTATGGAAGCATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTCCCCAGGGTGTCTCTTaGTCAGTTCTTCGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: GHRYGSMVKNRPRSAGYLPQGVS*SVLRLP
Trigger: AGGAAGCCGAAGAACTGATCAAGAGACACCCTGGGG...AAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATGCTTCCATACCTATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp GGACATAGGTATGGAAGCATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTTTGCATACTGGCGACTaGAGTCCAGGCAGAGCCCAT +
Preference number: 4 (lower is better)
Translates to: GHRYGSMVKNRPRSAGYLLHTGD*SPGRAH
Trigger: ATGGGCTCTGCCTGGACTTCAGTCGCCAGTATGCAA...AAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATGCTTCCATACCTATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp CCCAGAAAAGCAAAGGGAGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCAGCCAAAGTGGATGTTaGTGCATTTCTCCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: PRKAKGVGRKGPTSSSFPSQSGC*CISPGE
Trigger: TTCTCCAGGAGAAATGCATCAACATCCACTTTGGCT...GGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACTCCCTTTGCTTTTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGTAGAAAAGGATTGCGGACCACCTGTGTaGCTTCCTCTGGGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: KRETCWERFHLLSPVEKDCGPPV*LPLGWP
Trigger: GGGCCAACCCAGAGGAAGTCACACAGGTGGTCCGCA...ATCCTTTTCTACTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAATGCAGACCTCTCCGTaGTCACAGAGATCAGGCCTA +
Preference number: 4 (lower is better)
Translates to: RGRPPALSPPFKSKYKQEMQTSP*SQRSGL
Trigger: TAGGCCTGATCTCTGTGAGCACGGAGAGGTCTGCAT...TTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp GTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCCGCACCACGTGGCGGTTaGCTGTGTGCCAGCATTCCA +
Preference number: 4 (lower is better)
Translates to: VQTGRSSLLSLLPAQEAAAPRGG*LCASIP
Trigger: TGGAATGCTGGCACACAGGCAACCGCCACGTGGTGC...GGCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAATGCTGGTGTCTCCAGTaGTGTCTTCAGGGATACCTG +
Preference number: 4 (lower is better)
Translates to: RGRPPALSPPFKSKYKQECWCLQ*CLQGYL
Trigger: CAGGTATCCCTGAAGACAGCACTGGAGACACCAGCA...TTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp CCTTTCCCAAGAAGACAGCAGAAGTGGTTGACTAATTTGAGCTGTGACTGTGACGAGCGTCGTCAAGGTTaGAGGCACCCTGGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: PFPRRQQKWLTNLSCDCDERRQG*RHPGGP
Trigger: TGGACCCCCAGGGTGCCTGCAACCTTGACGACGCTC...GTCACAGTCACAGCTCAAATTAGTCAACCACTTCTGCTGTCTTCTTGGGAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCGAGTGGTGGCACAGGTaGAGGGACAGAGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: STNRKVIIIKPASSTGSSEWWHR*RDRGTR
Trigger: CCTGGTGCCTCTGTCCCTGCACCTGTGCCACCACTC...GCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp GTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCCCAGCTTCAGGGTTGGTaGCAGGAAACCCCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: VQTGRSSLLSLLPAQEAAQLQGW*QETPLQ
Trigger: CTGCAGCGGGGTTTCCTGGCACCAACCCTGAAGCTG...GGCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGTGAGCATATAAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGCAGCTTCAGGGTTGGTaGCAGGAAACCCCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SEHIRGRHAGRDFTCLVQQLQGW*QETPLQ
Trigger: CTGCAGCGGGGTTTCCTGGCACCAACCCTGAAGCTG...CTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTTATATGCTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp CCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACAGGCCAGCTGTTTGAACAGATGTCCTTATaGATACGGTACTGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: PRSAGYLIPSCLPTGQLFEQMSL*IRYCVS
Trigger: GGACACACAGTACCGTATGCATAAGGACATCTGTTC...AAACAGCTGGCCTGTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTGATTGCAGCAGCCTGTaGATTGTAGGGTGTAAGGAC +
Preference number: 4 (lower is better)
Translates to: SWEKGADLQLFPLHSSPSDCSSL*IVGCKD
Trigger: GTCCTTACACCCTACAATGCACAGGCTGCTGCAATC...ACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp GGACCTTGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGCTCTCATTGAGGCACTaGGTGCAGCGGGAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: GPWHRRMRDIPSVDGTSKLSLRH*VQREQP
Trigger: GGGCTGCTCCCGCTGCACCCAGTGCCTCAATGAGAG...CTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCAAGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCCCTCAACTATAACATaGATGAGAAGTGTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: HGEEQAQKCWVPYSQLPAPSTIT*MRSVGQ
Trigger: CTGCCCCACACTTCTCATCCATGTTATAGTTGAGGG...GGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGGAGGTTCTGCAGCCAGGCCTTAGAAGCCCCAGATGTCCTGGTGTATATTTCAAGGATGTCTTCTTTGTaGCAGTGGCCGCACCTCCAC +
Preference number: 4 (lower is better)
Translates to: RRFCSQALEAPDVLVYISRMSSL*QWPHLH
Trigger: GTGGAGGTGCGGCCACTGCCACAAAGAAGACATCCT...TGAAATATACACCAGGACATCTGGGGCTTCTAAGGCCTGGCTGCAGAACCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp TCTTTCTCTCGGGAATGTTTCCTTGCCCACTCTGAGAGTGCCTGTAAGAGATCTGGTGTGGTGGGAGACTaGGGGCCACCAGTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: SFSRECFLAHSESACKRSGVVGD*GPPVRK
Trigger: CTTTCTCACTGGTGGCCCCCAGTCTCCCACCACACC...AGATCTCTTACAGGCACTCTCAGAGTGGGCAAGGAAACATTCCCGAGAGAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGTGAGCATATAAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGATAGAGCTGGTGTGGTaGGAGACTGGGGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: SEHIRGRHAGRDFTCLVQIELVW*ETGGHQ
Trigger: CTGGTGGCCCCCAGTCTCCCACCACACCAGCTCTAT...CTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTTATATGCTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp TGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGGCTGGGGCTCCTGGGGGTGGCTaGGTGCTGGCTTCCCATTTA +
Preference number: 4 (lower is better)
Translates to: WHRRMRDIPSVDGTSKAGAPGGG*VLASHL
Trigger: TAAATGGGAAGCCAGCACCCAGCCACCCCCAGGAGC...CCCAGCCTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCCCAGGGCCCCATCCTTaGGCACCAAGCTGGCCACAT +
Preference number: 4 (lower is better)
Translates to: STNRKVIIIKPASSTGSSPGPHP*APSWPH
Trigger: ATGTGGCCAGCTTGGTGCCCAAGGATGGGGCCCTGG...GCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp GTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCCTCCACAGAGTCCAGGTaGGCTGGAAGCTCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: VQTGRSSLLSLLPAQEAASTESR*AGSSRP
Trigger: TGGCCTGGAGCTTCCAGCCCACCTGGACTCTGTGGA...GGCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGTAGAAAAGGATGGCTGGCTCTTGAGCTaGATGGCCAGGTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: KRETCWERFHLLSPVEKDGWLLS*MARCRL
Trigger: CAGCCTGCACCTGGCCATCCAGCTCAAGAGCCAGCC...ATCCTTTTCTACTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CAGGCCAGCTGTTTTACATTCCAGGAGGTAGGGCTGTGTGAGCATTTGGTTCAGGGAATGGTAGTGAATTaGGCAGGGATCGGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: QASCFTFQEVGLCEHLVQGMVVN*AGIGQR
Trigger: ACGCTGCCCGATCCCTGCCCAATTCACTACCATTCC...CTGAACCAAATGCTCACACAGCCCTACCTCCTGGAATGTAAAACAGCTGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp TCTTTCTCTCGGGAATGTTTCCTTGCCCACTCTGAGAGTGCCTGTAAGAGATCTGCAGCGGGAATTCAGTaGCCTCTGCCTGCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: SFSRECFLAHSESACKRSAAGIQ*PLPAPH
Trigger: ATGGGGAGCAGGCAGAGGCCACTGAATTCCCGCTGC...AGATCTCTTACAGGCACTCTCAGAGTGGGCAAGGAAACATTCCCGAGAGAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCGGGTCTCTGGCTCAGTaGCCATGCCTGCCTCGTCGA +
Preference number: 4 (lower is better)
Translates to: STNRKVIIIKPASSTGSSGSLAQ*PCLPRR
Trigger: TCGACGAGGCAGGCATGGCCACTGAGCCAGAGACCC...GCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp GGACATAGGTATGGAAGCATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTGAGCCAGCTCTTTGTTaGCCGCTGGTCCACATCACT +
Preference number: 4 (lower is better)
Translates to: GHRYGSMVKNRPRSAGYLEPALC*PLVHIT
Trigger: AGTGATGTGGACCAGCGGCCAACAAAGAGCTGGCTC...AAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATGCTTCCATACCTATGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp TGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGGCTGGGCCTCAGAGTGGATGGTaGACACCCACTGGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: WHRRMRDIPSVDGTSKAGPQSGW*TPTGAG
Trigger: TCCAGCACCAGTGGGTGTTCACCATCCACTCTGAGG...CCCAGCCTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp TGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGGCTGGGAGTGCATCCACTGCCTaGTGCCAGAACCGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: WHRRMRDIPSVDGTSKAGSASTA*CQNRKV
Trigger: GACCTTCCGGTTCTGGCATCAGGCAGTGGATGCACT...CCCAGCCTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp GGACATAGGTATGGAAGCATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTCTAACCTGGGCACCATaGGAGACAGCACAGATGTGT +
Preference number: 4 (lower is better)
Translates to: GHRYGSMVKNRPRSAGYLLTWAP*ETAQMC
Trigger: ACACATCTGTGCTGTCTCTCATGGTGCCCAGGTTAG...AAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATGCTTCCATACCTATGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp TGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGGCTGGGCTCAGTGAAGAACTCTaGGGTTGGTGCCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: WHRRMRDIPSVDGTSKAGLSEEL*GWCPWA
Trigger: AGCCCAGGGGCACCAACCTCAGAGTTCTTCACTGAG...CCCAGCCTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AGATCTCAGTGTCAAAGTGTAGTCTCAGAGGAGTCTTATTTCTGTTTAGGCCCCCCCACAGCCACCAGCTaGGACTGGGCACGAGTCATG +
Preference number: 4 (lower is better)
Translates to: RSQCQSVVSEESYFCLGPPTATS*DWARVM
Trigger: CATGACTCGTGCCCAGTCTCAGCTGGTGGCTGTGGG...GGGGCCTAAACAGAAATAAGACTCCTCTGAGACTACACTTTGACACTGAGATCT
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp CCTTTCCCAAGAAGACAGCAGAAGTGGTTGACTAATTTGAGCTGTGACTGTGACTGGTCCCTTCAGCTATaGGCCTTTGTGGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PFPRRQQKWLTNLSCDCDWSLQL*AFVGPG
Trigger: CCCAGGGCCCACAAAGGCTCATAGCTGAAGGGACCA...GTCACAGTCACAGCTCAAATTAGTCAACCACTTCTGCTGTCTTCTTGGGAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp TGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGGCTGGGGCACCTCATCCCCCGTaGATGCCATCCCACAGTTCA +
Preference number: 4 (lower is better)
Translates to: WHRRMRDIPSVDGTSKAGAPHPP*MPSHSS
Trigger: TGAACTGTGGGATGGCATTCACGGGGGATGAGGTGC...CCCAGCCTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp GGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACTGGTCATGTGATGGATaGGAAAATATACCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: GEEQAQKCWVPYSQLPAHWSCDG*ENIPAW
Trigger: CCAAGCAGGTATATTTTCTCATCCATCACATGACCA...GTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp CAGGCCAGCTGTTTTACATTCCAGGAGGTAGGGCTGTGTGAGCATTTGGTTCAGCTGGTAGATGCCTTGTaGAAAGAATGCTGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: QASCFTFQEVGLCEHLVQLVDAL*KECWRG
Trigger: GCCTCGCCAGCATTCTTTTCACAAGGCATCTACCAG...CTGAACCAAATGCTCACACAGCCCTACCTCCTGGAATGTAAAACAGCTGGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000108831.8
CDS-3UTR GCA 90 bp AGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTTCACTGATACTTCTTTaGTGCTGCGCTGGTATTCCG +
Preference number: 4 (lower is better)
Translates to: SWEKGADLQLFPLHSSPSSLILL*CCAGIP
Trigger: CGGAATACCAGCGCAGCAGCAAAGAAGTATCAGTGA...ACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp TACAGGGTGCCCAGTGCAACCATAGATAGATCTCAGTGTCAAAGTGTAGTCTCAGGGCTGTCTTGGGCCTaGAGCCCCAAAGCCATACAG +
Preference number: 4 (lower is better)
Translates to: YRVPSATIDRSQCQSVVSGLSWA*SPKAIQ
Trigger: CTGTATGGCTTTGGGGCTGCAGGCCCAAGACAGCCC...TGAGACTACACTTTGACACTGAGATCTATCTATGGTTGCACTGGGCACCCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGTGAGCATATAAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGGTGCTCCTCGAGCAGTaGATCCACTGCCTGATGCCA +
Preference number: 4 (lower is better)
Translates to: SEHIRGRHAGRDFTCLVQVLLEQ*IHCLMP
Trigger: TGGCATCAGGCAGTGGATGCACTGCTCGAGGAGCAC...CTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTTATATGCTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp TGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGGCTGGGTCAGGAACCACCAGGTaGTCCTCGAGCAGTGCATCC +
Preference number: 4 (lower is better)
Translates to: WHRRMRDIPSVDGTSKAGSGTTR*SSSSAS
Trigger: GGATGCACTGCTCGAGGAGCACCTGGTGGTTCCTGA...CCCAGCCTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp GTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCCTCAGGAACCACCAGGTaGTCCTCGAGCAGTGCATCC +
Preference number: 4 (lower is better)
Translates to: VQTGRSSLLSLLPAQEAASGTTR*SSSSAS
Trigger: GGATGCACTGCTCGAGGAGCACCTGGTGGTTCCTGA...GGCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp TCTTTCTCTCGGGAATGTTTCCTTGCCCACTCTGAGAGTGCCTGTAAGAGATCTTCGGGCCTTCTGTGGTaGAGAGCAAACCACGGTGTC +
Preference number: 4 (lower is better)
Translates to: SFSRECFLAHSESACKRSSGLLW*RANHGV
Trigger: GACACCGTGGTTTGCTCTGCACCACAGAAGGCCCGA...AGATCTCTTACAGGCACTCTCAGAGTGGGCAAGGAAACATTCCCGAGAGAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp GGACATAGGTATGGAAGCATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTCGGTGGATGGGAACTTaGTGTGGGTCCTTCATCTCT +
Preference number: 4 (lower is better)
Translates to: GHRYGSMVKNRPRSAGYLRWMGT*CGSFIS
Trigger: AGAGATGAAGGACCCACAGCAAGTTCCCATCCACCG...AAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATGCTTCCATACCTATGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTGCACCTCCAGGACAATaGCTAGTGGATAGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: SWEKGADLQLFPLHSSPSAPPGQ*LVDSRN
Trigger: GTTTCTACTATCCACTAGGCATTGTCCTGGAGGTGC...ACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp TGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGGCTGGGACACTGTCAAGCTGCTaGCTACTGGGTGTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: WHRRMRDIPSVDGTSKAGTLSSC*LLGVGC
Trigger: GCAGCCCACACCCAGTAGGCAGCAGCTTGACAGTGT...CCCAGCCTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp TACAGGGTGCCCAGTGCAACCATAGATAGATCTCAGTGTCAAAGTGTAGTCTCAAGCTGGAAGGTGCCCTaGAACTGCCCCTGGGATGTG +
Preference number: 4 (lower is better)
Translates to: YRVPSATIDRSQCQSVVSSWKVP*NCPWDV
Trigger: CACATCCCAGGGGCAGTTGCAGGGCACCTTCCAGCT...TGAGACTACACTTTGACACTGAGATCTATCTATGGTTGCACTGGGCACCCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGATTGCAGCAGCCTGTaGATTGTAGGGTGTAAGGAC +
Preference number: 4 (lower is better)
Translates to: RGRPPALSPPFKSKYKQEDCSSL*IVGCKD
Trigger: GTCCTTACACCCTACAATGCACAGGCTGCTGCAATC...TTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp TGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGGCTGGGAAGTCTAGGAGACGGTaGCAGAGTGGGCAGCAGCGT +
Preference number: 4 (lower is better)
Translates to: WHRRMRDIPSVDGTSKAGKSRRR*QSGQQR
Trigger: ACGCTGCTGCCCACTCTGGCACCGTCTCCTAGACTT...CCCAGCCTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTATGGCACAGAGTAGTTaGAAGTGGCCACCAAACTCT +
Preference number: 4 (lower is better)
Translates to: SWEKGADLQLFPLHSSPSMAQSS*KWPPNS
Trigger: AGAGTTTGGTGGCCACTTCCAACTACTCTGTGCCAT...ACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTCCCTCAACTATAACATaGATGAGAAGTGTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SWEKGADLQLFPLHSSPSPSTIT*MRSVGQ
Trigger: CTGCCCCACACTTCTCATCCATGTTATAGTTGAGGG...ACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp GGACATAGGTATGGAAGCATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTAAGGGATCCTCAGAGTaGATGGTGAACACCCACTGG +
Preference number: 4 (lower is better)
Translates to: GHRYGSMVKNRPRSAGYLKGSSE*MVNTHW
Trigger: CCAGTGGGTGTTCACCATCCACTCTGAGGATCCCTT...AAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATGCTTCCATACCTATGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGTAGAAAAGGATATAGAGGGCCCCTGGTaGTGCGAAGAGCATGCCGAG +
Preference number: 4 (lower is better)
Translates to: KRETCWERFHLLSPVEKDIEGPW*CEEHAE
Trigger: CTCGGCATGCTCTTCGCACCACCAGGGGCCCTCTAT...ATCCTTTTCTACTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CTGGGGTCCTCTGTGACCACTAAGAGGTGTCCCAGTCATCAAATGCCCCAGAAAAGCTATGAGCCTTTGTaGGCCCTGGGCCATAGATTT +
Preference number: 4 (lower is better)
Translates to: LGSSVTTKRCPSHQMPQKSYEPL*ALGHRF
Trigger: AAATCTATGGCCCAGGGCCCACAAAGGCTCATAGCT...TTTCTGGGGCATTTGATGACTGGGACACCTCTTAGTGGTCACAGAGGACCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp GGACATAGGTATGGAAGCATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTAGCGGCGGAATTGCTTaGAGTTTGAGCGCAGGAACT +
Preference number: 4 (lower is better)
Translates to: GHRYGSMVKNRPRSAGYLSGGIA*SLSAGT
Trigger: AGTTCCTGCGCTCAAACTCCAAGCAATTCCGCCGCT...AAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATGCTTCCATACCTATGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp GGACATAGGTATGGAAGCATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATCTCTGCAGAGCCTTaGAAACTGAGGCTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: GHRYGSMVKNRPRSAGYLISAEP*KLRLGL
Trigger: CAGACCCAGCCTCAGTTTCCAAGGCTCTGCAGAGAT...AAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATGCTTCCATACCTATGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CCCAGAAAAGCAAAGGGAGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCAGGAATTCAGCCACATaGCTGTTAAACTGGATCATG +
Preference number: 4 (lower is better)
Translates to: PRKAKGVGRKGPTSSSFPRNSAT*LLNWIM
Trigger: CATGATCCAGTTTAACAGCCATGTGGCTGAATTCCT...GGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACTCCCTTTGCTTTTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp TCTTTCTCTCGGGAATGTTTCCTTGCCCACTCTGAGAGTGCCTGTAAGAGATCTGGGCTGCCACCTGAGTaGTGTGAGTGTCTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: SFSRECFLAHSESACKRSGLPPE*CECLCV
Trigger: CACACACAGACACTCACACCACTCAGGTGGCAGCCC...AGATCTCTTACAGGCACTCTCAGAGTGGGCAAGGAAACATTCCCGAGAGAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAAGAGCCTGGTGCACATaGCTTGAAAAGCAGTCACCT +
Preference number: 4 (lower is better)
Translates to: RGRPPALSPPFKSKYKQERAWCT*LEKQSP
Trigger: AGGTGACTGCTTTTCAAGCCATGTGCACCAGGCTCT...TTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGATCTCAGTGTCAAAGTGTAGTCTCAGAGGAGTCTTATTTCTGTTTAGGCCCCGGGTCTCTGGCTCAGTaGCCATGCCTGCCTCGTCGA +
Preference number: 4 (lower is better)
Translates to: RSQCQSVVSEESYFCLGPGSLAQ*PCLPRR
Trigger: TCGACGAGGCAGGCATGGCCACTGAGCCAGAGACCC...GGGGCCTAAACAGAAATAAGACTCCTCTGAGACTACACTTTGACACTGAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp GGACCTTGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGTGTAGGTACTCTCATTaGGGCACTGGGTGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: GPWHRRMRDIPSVDGTSKCRYSH*GTGCSG
Trigger: CCCGCTGCACCCAGTGCCTCAATGAGAGTACCTACA...CTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCAAGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AGTGAGCATATAAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGGTGCATCTATTCCAGTaGCGCCTACAGCCCAACCCT +
Preference number: 4 (lower is better)
Translates to: SEHIRGRHAGRDFTCLVQVHLFQ*RLQPNP
Trigger: AGGGTTGGGCTGTAGGCGTCACTGGAATAGATGCAC...CTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTTATATGCTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTTTCTCAAATGCCTCTTaGGAATTACAGGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: SWEKGADLQLFPLHSSPSFSNAS*ELQVTR
Trigger: CCTGGTCACCTGTAATTCTCAAGAGGCATTTGAGAA...ACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp TCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGGTCATCATTAGTGGTGGGTGGCAAGTaGCAGACACTCCACGGATGG +
Preference number: 4 (lower is better)
Translates to: SSSFPSIQVQVQTGRSSLVVGGK*QTLHGW
Trigger: CCATCCGTGGAGTGTCTGTCACTTGCCACCCACCAC...TAATGATGACCTTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AGTGAGCATATAAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGGCTGCTCCAGGCTCTTaGTTGAGTAGGGCCACATGT +
Preference number: 4 (lower is better)
Translates to: SEHIRGRHAGRDFTCLVQAAPGS*LSRATC
Trigger: ACATGTGGCCCTACTCAATCAAGAGCCTGGAGCAGC...CTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTTATATGCTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp TACAGGGTGCCCAGTGCAACCATAGATAGATCTCAGTGTCAAAGTGTAGTCTCAGTCTTCTGCCTGCAATaGGCCCCACAGCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: YRVPSATIDRSQCQSVVSVFCLQ*APQPAS
Trigger: AGAAGCTGGCTGTGGGGCTCATTGCAGGCAGAAGAC...TGAGACTACACTTTGACACTGAGATCTATCTATGGTTGCACTGGGCACCCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp TACAGGGTGCCCAGTGCAACCATAGATAGATCTCAGTGTCAAAGTGTAGTCTCATGGTGTGTGTGCAGATaGGCACCTTGGTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: YRVPSATIDRSQCQSVVSWCVCR*APWCGA
Trigger: AGCCCCACACCAAGGTGCTCATCTGCACACACACCA...TGAGACTACACTTTGACACTGAGATCTATCTATGGTTGCACTGGGCACCCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp GTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCCCTGCATACATCACCCTaGGTGGAGTGGCCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: VQTGRSSLLSLLPAQEAALHTSP*VEWPLD
Trigger: ATCCAGAGGCCACTCCACTCAGGGTGATGTATGCAG...GGCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp GGACCTTGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGTGGAGCTCACGAGCCTaGGAAGTGGTGGTGACCACT +
Preference number: 4 (lower is better)
Translates to: GPWHRRMRDIPSVDGTSKWSSRA*EVVVTT
Trigger: AGTGGTCACCACCACTTCTCAGGCTCGTGAGCTCCA...CTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCAAGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp TCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGGTCATCATTAATGGCGAGGCGATCCTaGCCAGGGAGAAGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: SSSFPSIQVQVQTGRSSLMARRS*PGRRLS
Trigger: ACTCAGCCTTCTCCCTGGTCAGGATCGCCTCGCCAT...TAATGATGACCTTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AGTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCTCTTGGACCATGATGTaGGCTGTGCGGAAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: STNRKVIIIKPASSTGSSSWTMM*AVRKPS
Trigger: GCTGGGCTTCCGCACAGCTCACATCATGGTCCAAGA...GCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AGTGAGCATATAAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGAAGCCCAGCTTGTTTTaGGGCTGGCTCTTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SEHIRGRHAGRDFTCLVQKPSLF*GWLLSW
Trigger: CCAGCTCAAGAGCCAGCCTCAAAACAAGCTGGGCTT...CTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTTATATGCTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp CTGGGGTCCTCTGTGACCACTAAGAGGTGTCCCAGTCATCAAATGCCCCAGAAAGATGCTGTTTTCAGTTaGCGCACTGCTTCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: LGSSVTTKRCPSHQMPQKDAVFS*RTASSL
Trigger: CAAGGAAGAAGCAGTGCGTCAACTGAAAACAGCATC...TTTCTGGGGCATTTGATGACTGGGACACCTCTTAGTGGTCACAGAGGACCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp TGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGGCTGGGACTGTGTGTCCAGCATaGTGGCATCCCTGTGGTACC +
Preference number: 4 (lower is better)
Translates to: WHRRMRDIPSVDGTSKAGTVCPA*WHPCGT
Trigger: GGTACCACAGGGATGCCATCATGCTGGACACACAGT...CCCAGCCTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp TACAGGGTGCCCAGTGCAACCATAGATAGATCTCAGTGTCAAAGTGTAGTCTCATCCCTGGGGCAGGTGTaGTCTACCTCACGCAGAATG +
Preference number: 4 (lower is better)
Translates to: YRVPSATIDRSQCQSVVSSLGQV*STSRRM
Trigger: CATTCTGCGTGAGGTAGAGCACACCTGCCCCAGGGA...TGAGACTACACTTTGACACTGAGATCTATCTATGGTTGCACTGGGCACCCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp TCTTTCTCTCGGGAATGTTTCCTTGCCCACTCTGAGAGTGCCTGTAAGAGATCTCCAGATCTTGCTCTCTaGTGCTTGCTTGAAGCGGGC +
Preference number: 4 (lower is better)
Translates to: SFSRECFLAHSESACKRSPDLAL*CLLEAG
Trigger: GCCCGCTTCAAGCAAGCAGCAGAGAGCAAGATCTGG...AGATCTCTTACAGGCACTCTCAGAGTGGGCAAGGAAACATTCCCGAGAGAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp TGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGGCTGGGCCAGATCTTGCTCTCTaGTGCTTGCTTGAAGCGGGC +
Preference number: 4 (lower is better)
Translates to: WHRRMRDIPSVDGTSKAGPDLAL*CLLEAG
Trigger: GCCCGCTTCAAGCAAGCAGCAGAGAGCAAGATCTGG...CCCAGCCTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp GGACCTTGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGGTGGGGCAGATTTGGTaGTTAGGGCAATGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: GPWHRRMRDIPSVDGTSKVGQIW*LGQWPL
Trigger: CAGGGGCCATTGCCCTAAGCACCAAATCTGCCCCAC...CTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCAAGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGATCTCAGTGTCAAAGTGTAGTCTCAGAGGAGTCTTATTTCTGTTTAGGCCCCTGGCGGTTGCCTGTGTaGCAGCATTCCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: RSQCQSVVSEESYFCLGPWRLPV*QHSSSW
Trigger: CCAGGAGCTGGAATGCTGGCACACAGGCAACCGCCA...GGGGCCTAAACAGAAATAAGACTCCTCTGAGACTACACTTTGACACTGAGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp TCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGGTCATCATTATGGCGGTTGCCTGTGTaGCAGCATTCCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SSSFPSIQVQVQTGRSSLWRLPV*QHSSSW
Trigger: CCAGGAGCTGGAATGCTGGCACACAGGCAACCGCCA...TAATGATGACCTTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp CAGGCCAGCTGTTTTACATTCCAGGAGGTAGGGCTGTGTGAGCATTTGGTTCAGGCTTCTGTTTGTGATTaGCACGAAATGAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: QASCFTFQEVGLCEHLVQASVCD*HEMRVG
Trigger: CCCCACCCTCATTTCGTGGCAATCACAAACAGAAGC...CTGAACCAAATGCTCACACAGCCCTACCTCCTGGAATGTAAAACAGCTGGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGTGAGCATATAAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGCTGCTCAGGGCTTCCTaGCACATGGCAGAACATGAG +
Preference number: 4 (lower is better)
Translates to: SEHIRGRHAGRDFTCLVQLLRAS*HMAEHE
Trigger: CTCATGTTCTGCCATGTGGCAGGAAGCCCTGAGCAG...CTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTTATATGCTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp TCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGGTCATCATTAAGTCTGTGCCTTGGCTaGTGCCTCGGCTCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: SSSFPSIQVQVQTGRSSLSLCLG*CLGSGL
Trigger: GAGACCAGAGCCGAGGCAGCAGCCAAGGCACAGACT...TAATGATGACCTTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp TGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGGCTGGGTCTCCTGTAGGAAGCTaGAGCGGCGGAATTGCTTGG +
Preference number: 4 (lower is better)
Translates to: WHRRMRDIPSVDGTSKAGSPVGS*SGGIAW
Trigger: CCAAGCAATTCCGCCGCTGCAGCTTCCTACAGGAGA...CCCAGCCTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp CTGGGGTCCTCTGTGACCACTAAGAGGTGTCCCAGTCATCAAATGCCCCAGAAAGCACCTCCAGGACAATaGCTAGTGGATAGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: LGSSVTTKRCPSHQMPQKAPPGQ*LVDSRN
Trigger: GTTTCTACTATCCACTAGGCATTGTCCTGGAGGTGC...TTTCTGGGGCATTTGATGACTGGGACACCTCTTAGTGGTCACAGAGGACCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp CCTTTCCCAAGAAGACAGCAGAAGTGGTTGACTAATTTGAGCTGTGACTGTGACACACTGTCAAGCTGCTaGCTACTGGGTGTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: PFPRRQQKWLTNLSCDCDTLSSC*LLGVGC
Trigger: GCAGCCCACACCCAGTAGGCAGCAGCTTGACAGTGT...GTCACAGTCACAGCTCAAATTAGTCAACCACTTCTGCTGTCTTCTTGGGAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp CAGGCCAGCTGTTTTACATTCCAGGAGGTAGGGCTGTGTGAGCATTTGGTTCAGGGAGCCAGTGAAGGGTaGATGTCATCTGCAGCAATA +
Preference number: 4 (lower is better)
Translates to: QASCFTFQEVGLCEHLVQGASEG*MSSAAI
Trigger: TATTGCTGCAGATGACATGCACCCTTCACTGGCTCC...CTGAACCAAATGCTCACACAGCCCTACCTCCTGGAATGTAAAACAGCTGGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp CCTTTCCCAAGAAGACAGCAGAAGTGGTTGACTAATTTGAGCTGTGACTGTGACGCAGGGTATCTCCACTaGCCAGCTCGTAGACCACCT +
Preference number: 4 (lower is better)
Translates to: PFPRRQQKWLTNLSCDCDAGYLH*PARRPP
Trigger: AGGTGGTCTACGAGCTGGGCAGTGGAGATACCCTGC...GTCACAGTCACAGCTCAAATTAGTCAACCACTTCTGCTGTCTTCTTGGGAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp TACAGGGTGCCCAGTGCAACCATAGATAGATCTCAGTGTCAAAGTGTAGTCTCACCTGGCCGTTCCATGTaGTCCAGACAGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: YRVPSATIDRSQCQSVVSPGRSM*SRQRLK
Trigger: CTTCAGCCTCTGTCTGGAGCACATGGAACGGCCAGG...TGAGACTACACTTTGACACTGAGATCTATCTATGGTTGCACTGGGCACCCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp CCTTTCCCAAGAAGACAGCAGAAGTGGTTGACTAATTTGAGCTGTGACTGTGACTCAGTGGCCTCTGCCTaGTCCCCATATACACGCAGG +
Preference number: 4 (lower is better)
Translates to: PFPRRQQKWLTNLSCDCDSVASA*SPYTRR
Trigger: CCTGCGTGTATATGGGGAGCAGGCAGAGGCCACTGA...GTCACAGTCACAGCTCAAATTAGTCAACCACTTCTGCTGTCTTCTTGGGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTAAATTTTCTGATCTCTaGTGCATATGGGTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: SWEKGADLQLFPLHSSPSKFSDL*CIWVGG
Trigger: GCCCCCAACCCATATGCAGCAGAGATCAGAAAATTT...ACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGTAGAAAAGGATCGGAACAGCTCGGCTTaGCAGTGTGACCCAGGATAC +
Preference number: 4 (lower is better)
Translates to: KRETCWERFHLLSPVEKDRNSSA*QCDPGY
Trigger: GTATCCTGGGTCACACTGGCAAGCCGAGCTGTTCCG...ATCCTTTTCTACTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp TACAGGGTGCCCAGTGCAACCATAGATAGATCTCAGTGTCAAAGTGTAGTCTCACGGAACAGCTCGGCTTaGCAGTGTGACCCAGGATAC +
Preference number: 4 (lower is better)
Translates to: YRVPSATIDRSQCQSVVSRNSSA*QCDPGY
Trigger: GTATCCTGGGTCACACTGGCAAGCCGAGCTGTTCCG...TGAGACTACACTTTGACACTGAGATCTATCTATGGTTGCACTGGGCACCCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGATCTCAGTGTCAAAGTGTAGTCTCAGAGGAGTCTTATTTCTGTTTAGGCCCCATAGCGCATAGGCGTTaGGAAGCTAGGCCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: RSQCQSVVSEESYFCLGPIAHRR*EARPAA
Trigger: GGCCGCAGGCCTAGCTTCCCAACGCCTATGCGCTAT...GGGGCCTAAACAGAAATAAGACTCCTCTGAGACTACACTTTGACACTGAGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp GTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCCTTCCAGGGCACAGCCTaGTCAAAGGCCACCATCTGT +
Preference number: 4 (lower is better)
Translates to: VQTGRSSLLSLLPAQEAAFQGTA*SKATIC
Trigger: ACAGATGGTGGCCTTTGACCAGGCTGTGCCCTGGAA...GGCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp TGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGGCTGGGTTCCAGGGCACAGCCTaGTCAAAGGCCACCATCTGT +
Preference number: 4 (lower is better)
Translates to: WHRRMRDIPSVDGTSKAGFQGTA*SKATIC
Trigger: ACAGATGGTGGCCTTTGACCAGGCTGTGCCCTGGAA...CCCAGCCTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCCTGATGCACCGGTGGTaGGTGGCAAGTGACAGACAC +
Preference number: 4 (lower is better)
Translates to: STNRKVIIIKPASSTGSSLMHRW*VASDRH
Trigger: GTGTCTGTCACTTGCCACCCACCACCGGTGCATCAG...GCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGTAGAAAAGGATCTGATGCACCGGTGGTaGGTGGCAAGTGACAGACAC +
Preference number: 4 (lower is better)
Translates to: KRETCWERFHLLSPVEKDLMHRW*VASDRH
Trigger: GTGTCTGTCACTTGCCACCCACCACCGGTGCATCAG...ATCCTTTTCTACTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGATCTCAGTGTCAAAGTGTAGTCTCAGAGGAGTCTTATTTCTGTTTAGGCCCCATAGAGCTGGTGTGGTaGGAGACTGGGGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: RSQCQSVVSEESYFCLGPIELVW*ETGGHQ
Trigger: CTGGTGGCCCCCAGTCTCCCACCACACCAGCTCTAT...GGGGCCTAAACAGAAATAAGACTCCTCTGAGACTACACTTTGACACTGAGATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp GGACCTTGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGCCCTGGCTGTGTGTCTaGCCTAGCTGCAACTTCAGC +
Preference number: 4 (lower is better)
Translates to: GPWHRRMRDIPSVDGTSKPWLCV*PSCNFS
Trigger: GCTGAAGTTGCAGCTAGGCCAGACACACAGCCAGGG...CTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCAAGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp GGACATAGGTATGGAAGCATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTAGGGTAACTTGTACTTaGCCATCAGGGCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GHRYGSMVKNRPRSAGYLRVTCT*PSGLPA
Trigger: AGCAGGAAGCCCTGATGGCCAAGTACAAGTTACCCT...AAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATGCTTCCATACCTATGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp TCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGGTCATCATTAATAGAGGGCCCCTGGTaGTGCGAAGAGCATGCCGAG +
Preference number: 4 (lower is better)
Translates to: SSSFPSIQVQVQTGRSSLIEGPW*CEEHAE
Trigger: CTCGGCATGCTCTTCGCACCACCAGGGGCCCTCTAT...TAATGATGACCTTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CCTTTCCCAAGAAGACAGCAGAAGTGGTTGACTAATTTGAGCTGTGACTGTGACACTGCACCTCCAAGATaGGGCTGTCTTGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: PFPRRQQKWLTNLSCDCDTAPPR*GCLGPA
Trigger: TGCAGGCCCAAGACAGCCCCATCTTGGAGGTGCAGT...GTCACAGTCACAGCTCAAATTAGTCAACCACTTCTGCTGTCTTCTTGGGAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp GTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCCATGAGCACCTTGGTGTaGGGCTGCTGGACAACCTCA +
Preference number: 4 (lower is better)
Translates to: VQTGRSSLLSLLPAQEAAMSTLV*GCWTTS
Trigger: TGAGGTTGTCCAGCAGCCCCACACCAAGGTGCTCAT...GGCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp TACAGGGTGCCCAGTGCAACCATAGATAGATCTCAGTGTCAAAGTGTAGTCTCAGTGATGTACCAGCTCTaGGCCTGTGGGTGGGCGAAA +
Preference number: 4 (lower is better)
Translates to: YRVPSATIDRSQCQSVVSVMYQL*ACGWAK
Trigger: TTTCGCCCACCCACAGGCCCAGAGCTGGTACATCAC...TGAGACTACACTTTGACACTGAGATCTATCTATGGTTGCACTGGGCACCCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp TCTTTCTCTCGGGAATGTTTCCTTGCCCACTCTGAGAGTGCCTGTAAGAGATCTGGTGTGACCTGCATGTaGTCCCCTGCCAGTACTACA +
Preference number: 4 (lower is better)
Translates to: SFSRECFLAHSESACKRSGVTCM*SPASTT
Trigger: TGTAGTACTGGCAGGGGACCACATGCAGGTCACACC...AGATCTCTTACAGGCACTCTCAGAGTGGGCAAGGAAACATTCCCGAGAGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CCTTTCCCAAGAAGACAGCAGAAGTGGTTGACTAATTTGAGCTGTGACTGTGACGCCCAGTTCTGTCTCTaGGCCACACCCTGCTCAATC +
Preference number: 4 (lower is better)
Translates to: PFPRRQQKWLTNLSCDCDAQFCL*ATPCSI
Trigger: GATTGAGCAGGGTGTGGCCCAGAGACAGAACTGGGC...GTCACAGTCACAGCTCAAATTAGTCAACCACTTCTGCTGTCTTCTTGGGAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp TCTTTCTCTCGGGAATGTTTCCTTGCCCACTCTGAGAGTGCCTGTAAGAGATCTGGAATGGTAGTGAATTaGGCAGGGATCGGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: SFSRECFLAHSESACKRSGMVVN*AGIGQR
Trigger: ACGCTGCCCGATCCCTGCCCAATTCACTACCATTCC...AGATCTCTTACAGGCACTCTCAGAGTGGGCAAGGAAACATTCCCGAGAGAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGGAGGTTCTGCAGCCAGGCCTTAGAAGCCCCAGATGTCCTGGTGTATATTTCATGGTCTTGCAGAGCCTaGTGCACATGGCTTGAAAAG +
Preference number: 4 (lower is better)
Translates to: RRFCSQALEAPDVLVYISWSCRA*CTWLEK
Trigger: CTTTTCAAGCCATGTGCACCAGGCTCTGCAAGACCA...TGAAATATACACCAGGACATCTGGGGCTTCTAAGGCCTGGCTGCAGAACCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp GGACCTTGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGCCACCAGCCAGTTCATaGTCCCAGTCACCAGACAGC +
Preference number: 4 (lower is better)
Translates to: GPWHRRMRDIPSVDGTSKPPASS*SQSPDS
Trigger: GCTGTCTGGTGACTGGGACCATGAACTGGCTGGTGG...CTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCAAGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp TGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGGCTGGGTCATCCACATTCTCCTaGTCCCAGTCACCACCAGCC +
Preference number: 4 (lower is better)
Translates to: WHRRMRDIPSVDGTSKAGSSTFS*SQSPPA
Trigger: GGCTGGTGGTGACTGGGACCAGGAGAATGTGGATGA...CCCAGCCTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp GTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCCACACGGTTCAGATATTaGGCCACAGGGCCCGGACAT +
Preference number: 4 (lower is better)
Translates to: VQTGRSSLLSLLPAQEAATRFRY*ATGPGH
Trigger: ATGTCCGGGCCCTGTGGCCCAATATCTGAACCGTGT...GGCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp TCTTTCTCTCGGGAATGTTTCCTTGCCCACTCTGAGAGTGCCTGTAAGAGATCTACACGGTTCAGATATTaGGCCACAGGGCCCGGACAT +
Preference number: 4 (lower is better)
Translates to: SFSRECFLAHSESACKRSTRFRY*ATGPGH
Trigger: ATGTCCGGGCCCTGTGGCCCAATATCTGAACCGTGT...AGATCTCTTACAGGCACTCTCAGAGTGGGCAAGGAAACATTCCCGAGAGAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAATGATGGCATCCCTGTaGTACCTCTCAAAGAGAGAC +
Preference number: 4 (lower is better)
Translates to: RGRPPALSPPFKSKYKQEMMASL*YLSKRD
Trigger: GTCTCTCTTTGAGAGGTACCACAGGGATGCCATCAT...TTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp TACAGGGTGCCCAGTGCAACCATAGATAGATCTCAGTGTCAAAGTGTAGTCTCAAGCAGCTTCTGCTCATaGCCCTGCACAGAGCCGAAG +
Preference number: 4 (lower is better)
Translates to: YRVPSATIDRSQCQSVVSSSFCS*PCTEPK
Trigger: CTTCGGCTCTGTGCAGGGCCATGAGCAGAAGCTGCT...TGAGACTACACTTTGACACTGAGATCTATCTATGGTTGCACTGGGCACCCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp TCTTTCTCTCGGGAATGTTTCCTTGCCCACTCTGAGAGTGCCTGTAAGAGATCTCTCCAGGCTCTTGATTaGGTAGGGCCACATGTAGCA +
Preference number: 4 (lower is better)
Translates to: SFSRECFLAHSESACKRSLQALD*VGPHVA
Trigger: TGCTACATGTGGCCCTACTCAATCAAGAGCCTGGAG...AGATCTCTTACAGGCACTCTCAGAGTGGGCAAGGAAACATTCCCGAGAGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp TACAGGGTGCCCAGTGCAACCATAGATAGATCTCAGTGTCAAAGTGTAGTCTCACAAAGGGGCCATAGATaGGCAGTGGTGGGATGTGCT +
Preference number: 4 (lower is better)
Translates to: YRVPSATIDRSQCQSVVSQRGHR*AVVGCA
Trigger: AGCACATCCCACCACTGCTCATCTATGGCCCCTTTG...TGAGACTACACTTTGACACTGAGATCTATCTATGGTTGCACTGGGCACCCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AGTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCCTGCATACATCACCCTaGGTGGAGTGGCCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: STNRKVIIIKPASSTGSSLHTSP*VEWPLD
Trigger: ATCCAGAGGCCACTCCACTCAGGGTGATGTATGCAG...GCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp TACAGGGTGCCCAGTGCAACCATAGATAGATCTCAGTGTCAAAGTGTAGTCTCAGTGACCACTAAACGGTaGTGTACCAGCTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: YRVPSATIDRSQCQSVVSVTTKR*CTSSGP
Trigger: AGGCCCAGAGCTGGTACATCACCGTTTAGTGGTCAC...TGAGACTACACTTTGACACTGAGATCTATCTATGGTTGCACTGGGCACCCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp GGACCTTGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGCCACATGGCAGAACATaGGAGGGTAGTGTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: GPWHRRMRDIPSVDGTSKPHGRT*EGSVGG
Trigger: ACCCCCAACACTACCCTCTCATGTTCTGCCATGTGG...CTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCAAGGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp TCTTTCTCTCGGGAATGTTTCCTTGCCCACTCTGAGAGTGCCTGTAAGAGATCTGTACTCGAGGCTCAGTaGAGAACTCTGAGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: SFSRECFLAHSESACKRSVLEAQ*RTLRLV
Trigger: CACCAACCTCAGAGTTCTTCACTGAGCCTCGAGTAC...AGATCTCTTACAGGCACTCTCAGAGTGGGCAAGGAAACATTCCCGAGAGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp TCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGGTCATCATTACAGAGCCTTGGAAACTaGGGCTGGGTCTGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: SSSFPSIQVQVQTGRSSLQSLGN*GWVWCV
Trigger: CACACACCAGACCCAGCCTCAGTTTCCAAGGCTCTG...TAATGATGACCTTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AGATCTCAGTGTCAAAGTGTAGTCTCAGAGGAGTCTTATTTCTGTTTAGGCCCCTCTTGGACCATGATGTaGGCTGTGCGGAAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RSQCQSVVSEESYFCLGPSWTMM*AVRKPS
Trigger: GCTGGGCTTCCGCACAGCTCACATCATGGTCCAAGA...GGGGCCTAAACAGAAATAAGACTCCTCTGAGACTACACTTTGACACTGAGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AGTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCAGGCTGGAACCAAGCTaGACCTGCAGGGTATCTCCA +
Preference number: 4 (lower is better)
Translates to: STNRKVIIIKPASSTGSSRLEPS*TCRVSP
Trigger: TGGAGATACCCTGCAGGTTCAGCTTGGTTCCAGCCT...GCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp CTGGGGTCCTCTGTGACCACTAAGAGGTGTCCCAGTCATCAAATGCCCCAGAAAAGCCAAAGTGGATGTTaGTGCATTTCTCCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: LGSSVTTKRCPSHQMPQKSQSGC*CISPGE
Trigger: TTCTCCAGGAGAAATGCATCAACATCCACTTTGGCT...TTTCTGGGGCATTTGATGACTGGGACACCTCTTAGTGGTCACAGAGGACCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp CATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCTTCTCCATGGTCATGTaGTGGATGAGAAAATATACC +
Preference number: 4 (lower is better)
Translates to: HGEEQAQKCWVPYSQLPAFSMVM*WMRKYT
Trigger: GGTATATTTTCTCATCCATCACATGACCATGGAGAA...GGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp TCTTTCTCTCGGGAATGTTTCCTTGCCCACTCTGAGAGTGCCTGTAAGAGATCTATGCAGACCTCTCCGTaGTCACAGAGATCAGGCCTA +
Preference number: 4 (lower is better)
Translates to: SFSRECFLAHSESACKRSMQTSP*SQRSGL
Trigger: TAGGCCTGATCTCTGTGAGCACGGAGAGGTCTGCAT...AGATCTCTTACAGGCACTCTCAGAGTGGGCAAGGAAACATTCCCGAGAGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGGAACTTAATTTGTAGAAAACACCAGATATTATCCTCACAGGAGGTTCTGCAGGGTACCAGCCCATCCTaGCAGGCGGCCTGTTCTCGC +
Preference number: 4 (lower is better)
Translates to: RNLICRKHQILSSQEVLQGTSPS*QAACSR
Trigger: GCGAGAACAGGCCGCCTGGCAGGATGGGCTGGTACC...CTGCAGAACCTCCTGTGAGGATAATATCTGGTGTTTTCTACAAATTAAGTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCTCAAAGACCACCCACTaGTCAAAGCTGCCGAAGGCG +
Preference number: 4 (lower is better)
Translates to: STNRKVIIIKPASSTGSSSKTTH*SKLPKA
Trigger: CGCCTTCGGCAGCTTTGAGCAGTGGGTGGTCTTTGA...GCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGTAGAAAAGGATTCAAAGACCACCCACTaGTCAAAGCTGCCGAAGGCG +
Preference number: 4 (lower is better)
Translates to: KRETCWERFHLLSPVEKDSKTTH*SKLPKA
Trigger: CGCCTTCGGCAGCTTTGAGCAGTGGGTGGTCTTTGA...ATCCTTTTCTACTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCGGGTCAATCTGGAACTaGACCTCCAAGATGGGGCTG +
Preference number: 4 (lower is better)
Translates to: STNRKVIIIKPASSTGSSGSIWN*TSKMGL
Trigger: CAGCCCCATCTTGGAGGTGCAGTTCCAGATTGACCC...GCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCCTCTGGGCCACACCCTaGTCAATCTGTTCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: STNRKVIIIKPASSTGSSLWATP*SICSSD
Trigger: GTCACTGGAACAGATTGAGCAGGGTGTGGCCCAGAG...GCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp CCTTTCCCAAGAAGACAGCAGAAGTGGTTGACTAATTTGAGCTGTGACTGTGACCAGCGGAGTGGCCAATaGTCTCTCAAAGGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: PFPRRQQKWLTNLSCDCDQRSGQ*SLKGLL
Trigger: CAGGAGACCTTTGAGAGAGCATTGGCCACTCCGCTG...GTCACAGTCACAGCTCAAATTAGTCAACCACTTCTGCTGTCTTCTTGGGAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCCAGCGGAGTGGCCAATaGTCTCTCAAAGGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: STNRKVIIIKPASSTGSSQRSGQ*SLKGLL
Trigger: CAGGAGACCTTTGAGAGAGCATTGGCCACTCCGCTG...GCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTTGGGTCCTTCATCTCTaGCACAAAAATCTTAGTCAC +
Preference number: 4 (lower is better)
Translates to: SWEKGADLQLFPLHSSPSWVLHL*HKNLSH
Trigger: GTGACTAAGATTTTTGTGGCAGAGATGAAGGACCCA...ACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp TGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGGCTGGGAGGGAAGTCAGGAGATaGAGCTGCTTGTTGGGGGTA +
Preference number: 4 (lower is better)
Translates to: WHRRMRDIPSVDGTSKAGREVRR*SCLLGV
Trigger: TACCCCCAACAAGCAGCTGCATCTCCTGACTTCCCT...CCCAGCCTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp CCTTTCCCAAGAAGACAGCAGAAGTGGTTGACTAATTTGAGCTGTGACTGTGACGCACTGCTTCTTCCTTaGGGAGGTCAGGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PFPRRQQKWLTNLSCDCDALLLP*GGQEAA
Trigger: AGCAGCTTCCTGACCTCCGCAAGGAAGAAGCAGTGC...GTCACAGTCACAGCTCAAATTAGTCAACCACTTCTGCTGTCTTCTTGGGAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp TGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGGCTGGGCTGTCAGTTGGCATCTaGTCCTGGTTTGACCTGTGG +
Preference number: 4 (lower is better)
Translates to: WHRRMRDIPSVDGTSKAGLSVGI*SWFDLW
Trigger: CCACAGGTCAAACCAGGAGCAGATGCCAACTGACAG...CCCAGCCTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp GTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCCTGCAACTTCAGCTTCTaGAGAAGCACTGGCCTGCGA +
Preference number: 4 (lower is better)
Translates to: VQTGRSSLLSLLPAQEAACNFSF*RSTGLR
Trigger: TCGCAGGCCAGTGCTTCTCCAGAAGCTGAAGTTGCA...GGCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGTAGAAAAGGATGAGCATGCCGAGTGCTaGTGTCTCCAGTGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: KRETCWERFHLLSPVEKDEHAEC*CLQCCL
Trigger: AAGACAGCACTGGAGACACCAGCACTCGGCATGCTC...ATCCTTTTCTACTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CAGGCCAGCTGTTTTACATTCCAGGAGGTAGGGCTGTGTGAGCATTTGGTTCAGGTCATAGGGTCAATCTaGAACTGCACCTCCAAGATG +
Preference number: 4 (lower is better)
Translates to: QASCFTFQEVGLCEHLVQVIGSI*NCTSKM
Trigger: CATCTTGGAGGTGCAGTTCCAGATTGACCCTATGAC...CTGAACCAAATGCTCACACAGCCCTACCTCCTGGAATGTAAAACAGCTGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGTGAGCATATAAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGGCCATAGATGAGCAGTaGTGGGATGTGCTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: SEHIRGRHAGRDFTCLVQAIDEQ*WDVLCA
Trigger: GGCACAAAGCACATCCCACCACTGCTCATCTATGGC...CTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTTATATGCTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp TCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGGTCATCATTATCAGGGAAGGCGCTGTaGTGTTCTATGCACTCGCGG +
Preference number: 4 (lower is better)
Translates to: SSSFPSIQVQVQTGRSSLSGKAL*CSMHSR
Trigger: CCGCGAGTGCATAGAACACCACAGCGCCTTCCCTGA...TAATGATGACCTTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGATCTCAGTGTCAAAGTGTAGTCTCAGAGGAGTCTTATTTCTGTTTAGGCCCCGCCCAGTTCTGTCTCTaGGCCACACCCTGCTCAATC +
Preference number: 4 (lower is better)
Translates to: RSQCQSVVSEESYFCLGPAQFCL*ATPCSI
Trigger: GATTGAGCAGGGTGTGGCCCAGAGACAGAACTGGGC...GGGGCCTAAACAGAAATAAGACTCCTCTGAGACTACACTTTGACACTGAGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGCCCCAGATGTCCTGGTGTATATTTCACTTGCAGCAACTCTGACCTCGGCGGGAGGAATTCAGCCACATaGCTGTTAAACTGGATCATG +
Preference number: 4 (lower is better)
Translates to: SPRCPGVYFTCSNSDLGGRNSAT*LLNWIM
Trigger: CATGATCCAGTTTAACAGCCATGTGGCTGAATTCCT...CCCGCCGAGGTCAGAGTTGCTGCAAGTGAAATATACACCAGGACATCTGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGTAGAAAAGGATGCTGCTTACCCTGGCTaGAGCGACCAAAAACAGAGC +
Preference number: 4 (lower is better)
Translates to: KRETCWERFHLLSPVEKDAAYPG*SDQKQS
Trigger: GCTCTGTTTTTGGTCGCTCCAGCCAGGGTAAGCAGC...ATCCTTTTCTACTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGTAGAAAAGGATGTGGTAAAGGCAGCTTaGACGCCTGCACCGAGTACA +
Preference number: 4 (lower is better)
Translates to: KRETCWERFHLLSPVEKDVVKAA*TPAPST
Trigger: TGTACTCGGTGCAGGCGTCCAAGCTGCCTTTACCAC...ATCCTTTTCTACTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGTAGAAAAGGATCCCTGCAACTGCCCCTaGGATGTGTCCCAAGAGATA +
Preference number: 4 (lower is better)
Translates to: KRETCWERFHLLSPVEKDPCNCP*DVSQEI
Trigger: TATCTCTTGGGACACATCCCAGGGGCAGTTGCAGGG...ATCCTTTTCTACTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp GGACATAGGTATGGAAGCATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTTCTCAGCACCTCTTCTaGAACCTTCTCCATGGTCAT +
Preference number: 4 (lower is better)
Translates to: GHRYGSMVKNRPRSAGYLSQHLF*NLLHGH
Trigger: ATGACCATGGAGAAGGTTCCAGAAGAGGTGCTGAGA...AAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATGCTTCCATACCTATGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGTAGAAAAGGATGTGCCTGGTGGGCCCTaGATGACTGTGAACTGTTTC +
Preference number: 4 (lower is better)
Translates to: KRETCWERFHLLSPVEKDVPGGP*MTVNCF
Trigger: GAAACAGTTCACAGTCATCCAGGGCCCACCAGGCAC...ATCCTTTTCTACTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000108831.8
CDS-3UTR CCA 90 bp GTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCCCTGTGTGACTTCCTCTaGGTTGGCCCTAGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: VQTGRSSLLSLLPAQEAALCDFL*VGPRVL
Trigger: GAGAACTCTAGGGCCAACCCAGAGGAAGTCACACAG...GGCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp TACAGGGTGCCCAGTGCAACCATAGATAGATCTCAGTGTCAAAGTGTAGTCTCACGCCACTCACTCCCCTaGCTCTTGGTAATAGAGGTC +
Preference number: 4 (lower is better)
Translates to: YRVPSATIDRSQCQSVVSRHSLP*LLVIEV
Trigger: GACCTCTATTACCAAGAGCCAGGGGAGTGAGTGGCG...TGAGACTACACTTTGACACTGAGATCTATCTATGGTTGCACTGGGCACCCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp TACAGGGTGCCCAGTGCAACCATAGATAGATCTCAGTGTCAAAGTGTAGTCTCAGCCACGTTTACTTGGTaGGGGTCCACAACAAAGCCC +
Preference number: 4 (lower is better)
Translates to: YRVPSATIDRSQCQSVVSATFTW*GSTTKP
Trigger: GGGCTTTGTTGTGGACCCCCACCAAGTAAACGTGGC...TGAGACTACACTTTGACACTGAGATCTATCTATGGTTGCACTGGGCACCCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
3UTR CAA 72 bp GGGGTTGTCACACTGAAGGGGGAGATGATCCCAGCTTaGGAATTGTCAGGAAGTGAGCATATAAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: GVVTLKGEMIPA*ELSGSEHIRGR
Trigger: TCTCCCTCTTATATGCTCACTTCCTGACAATTCCAAAGCTGGGATCATCTCCCCCTTCAGTGTGACAACCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AGTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCCTTGAGAATTACAGGTaGCCAGGCAGGCATGGCAGT +
Preference number: 4 (lower is better)
Translates to: STNRKVIIIKPASSTGSSLENYR*PGRHGS
Trigger: ACTGCCATGCCTGCCTGGTCACCTGTAATTCTCAAG...GCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AGTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCGGTCTCAGCCATCACTaGTACTTCTTTGCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: STNRKVIIIKPASSTGSSGLSHH*YFFAAA
Trigger: CGCAGCAGCAAAGAAGTATCAGTGATGGCTGAGACC...GCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp TCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGGTCATCATTACAGTCCGGAACAATCTaGTTGAACTCCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SSSFPSIQVQVQTGRSSLQSGTI*LNSRAR
Trigger: CCTGGCCCTGGAGTTCAATCAGATTGTTCCGGACTG...TAATGATGACCTTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AGTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCCTCAACAGGAAGCCCTaGTCAGTGTCTGGCAACAGA +
Preference number: 4 (lower is better)
Translates to: STNRKVIIIKPASSTGSSLNRKP*SVSGNR
Trigger: TCTGTTGCCAGACACTGATCAGGGCTTCCTGTTGAG...GCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp TCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGGTCATCATTACCCCAGGGTGTCTCTTaGTCAGTTCTTCGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SSSFPSIQVQVQTGRSSLPQGVS*SVLRLP
Trigger: AGGAAGCCGAAGAACTGATCAAGAGACACCCTGGGG...TAATGATGACCTTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp GGACATAGGTATGGAAGCATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTGGGCATCAAATTTTCTaGTCTCTGCTGCATATGGGT +
Preference number: 4 (lower is better)
Translates to: GHRYGSMVKNRPRSAGYLGHQIF*SLLHMG
Trigger: ACCCATATGCAGCAGAGATCAGAAAATTTGATGCCC...AAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATGCTTCCATACCTATGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AGGAACTTAATTTGTAGAAAACACCAGATATTATCCTCACAGGAGGTTCTGCAGTGCGGACCACCTGTGTaGCTTCCTCTGGGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: RNLICRKHQILSSQEVLQCGPPV*LPLGWP
Trigger: GGGCCAACCCAGAGGAAGTCACACAGGTGGTCCGCA...CTGCAGAACCTCCTGTGAGGATAATATCTGGTGTTTTCTACAAATTAAGTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AGTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCAGCCCAGAAACTTCTTaGGCCAGCTCTTTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: STNRKVIIIKPASSTGSSSPETS*ASSLLA
Trigger: GGCCAACAAAGAGCTGGCTCAAGAAGTTTCTGGGCT...GCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp GGACATAGGTATGGAAGCATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTCACGGCCCACATACATaGAGTAGTTTAAAGGATGTC +
Preference number: 4 (lower is better)
Translates to: GHRYGSMVKNRPRSAGYLHGPHT*SSLKDV
Trigger: GACATCCTTTAAACTACTGCATGTATGTGGGCCGTG...AAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATGCTTCCATACCTATGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGATCTCAGTGTCAAAGTGTAGTCTCAGAGGAGTCTTATTTCTGTTTAGGCCCCTTGGCTACTAGCTGCTaGTGGGCTGCTTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: RSQCQSVVSEESYFCLGPLATSC*WAASSS
Trigger: TGAGGAGGAAGCAGCCCAGCAGCAGCTAGTAGCCAA...GGGGCCTAAACAGAAATAAGACTCCTCTGAGACTACACTTTGACACTGAGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGATCTCAGTGTCAAAGTGTAGTCTCAGAGGAGTCTTATTTCTGTTTAGGCCCCGGGTCAATCTGGAACTaGACCTCCAAGATGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RSQCQSVVSEESYFCLGPGSIWN*TSKMGL
Trigger: CAGCCCCATCTTGGAGGTGCAGTTCCAGATTGACCC...GGGGCCTAAACAGAAATAAGACTCCTCTGAGACTACACTTTGACACTGAGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp TCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGGTCATCATTAAGCAGTGGTGGGATGTaGTTTGTGCCCTCGGGTCTT +
Preference number: 4 (lower is better)
Translates to: SSSFPSIQVQVQTGRSSLSSGGM*FVPSGL
Trigger: AAGACCCGAGGGCACAAAGCACATCCCACCACTGCT...TAATGATGACCTTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp TACAGGGTGCCCAGTGCAACCATAGATAGATCTCAGTGTCAAAGTGTAGTCTCAGCAGGATCTCAAAGCTaGCCACAGACACCTCACCAA +
Preference number: 4 (lower is better)
Translates to: YRVPSATIDRSQCQSVVSAGSQS*PQTPHQ
Trigger: TTGGTGAGGTGTCTGTGGGCAGCTTTGAGATCCTGC...TGAGACTACACTTTGACACTGAGATCTATCTATGGTTGCACTGGGCACCCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGATCTCAGTGTCAAAGTGTAGTCTCAGAGGAGTCTTATTTCTGTTTAGGCCCCCTCTGGGCCACACCCTaGTCAATCTGTTCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: RSQCQSVVSEESYFCLGPLWATP*SICSSD
Trigger: GTCACTGGAACAGATTGAGCAGGGTGTGGCCCAGAG...GGGGCCTAAACAGAAATAAGACTCCTCTGAGACTACACTTTGACACTGAGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp CCTTTCCCAAGAAGACAGCAGAAGTGGTTGACTAATTTGAGCTGTGACTGTGACAGGGAAGTCAGGAGATaGAGCTGCTTGTTGGGGGTA +
Preference number: 4 (lower is better)
Translates to: PFPRRQQKWLTNLSCDCDREVRR*SCLLGV
Trigger: TACCCCCAACAAGCAGCTGCATCTCCTGACTTCCCT...GTCACAGTCACAGCTCAAATTAGTCAACCACTTCTGCTGTCTTCTTGGGAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp GGACATAGGTATGGAAGCATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTGAACCTGCTGGTAGATaGCTTGTGAAAAGAATGCTG +
Preference number: 4 (lower is better)
Translates to: GHRYGSMVKNRPRSAGYLEPAGR*LVKRML
Trigger: CAGCATTCTTTTCACAAGGCATCTACCAGCAGGTTC...AAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATGCTTCCATACCTATGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000108831.8
CDS-3UTR CCA 90 bp GGACCTTGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGCAGAGTAGTTGGAAGTaGCCACCAAACTCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: GPWHRRMRDIPSVDGTSKQSSWK*PPNSAR
Trigger: CCGAGCAGAGTTTGGTGGCCACTTCCAACTACTCTG...CTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCAAGGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGTAGAAAAGGATAAGGGATCCTCAGAGTaGATGGTGAACACCCACTGG +
Preference number: 4 (lower is better)
Translates to: KRETCWERFHLLSPVEKDKGSSE*MVNTHW
Trigger: CCAGTGGGTGTTCACCATCCACTCTGAGGATCCCTT...ATCCTTTTCTACTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp TCTTTCTCTCGGGAATGTTTCCTTGCCCACTCTGAGAGTGCCTGTAAGAGATCTCTTCTGGAGAAGCACTaGCCTGCGACCAAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: SFSRECFLAHSESACKRSLLEKH*PATKVK
Trigger: TTTGACTTTGGTCGCAGGCCAGTGCTTCTCCAGAAG...AGATCTCTTACAGGCACTCTCAGAGTGGGCAAGGAAACATTCCCGAGAGAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CCTTTCCCAAGAAGACAGCAGAAGTGGTTGACTAATTTGAGCTGTGACTGTGACTGCAACTTCAGCTTCTaGAGAAGCACTGGCCTGCGA +
Preference number: 4 (lower is better)
Translates to: PFPRRQQKWLTNLSCDCDCNFSF*RSTGLR
Trigger: TCGCAGGCCAGTGCTTCTCCAGAAGCTGAAGTTGCA...GTCACAGTCACAGCTCAAATTAGTCAACCACTTCTGCTGTCTTCTTGGGAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp GTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCCAGGGTAACTTGTACTTaGCCATCAGGGCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: VQTGRSSLLSLLPAQEAARVTCT*PSGLPA
Trigger: AGCAGGAAGCCCTGATGGCCAAGTACAAGTTACCCT...GGCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CTGGGGTCCTCTGTGACCACTAAGAGGTGTCCCAGTCATCAAATGCCCCAGAAAGGATGGGATTACCCTTaGCTAAATAGAAATGATGGG +
Preference number: 4 (lower is better)
Translates to: LGSSVTTKRCPSHQMPQKGWDYP*LNRNDG
Trigger: CCCATCATTTCTATTTAGCCAAGGGTAATCCCATCC...TTTCTGGGGCATTTGATGACTGGGACACCTCTTAGTGGTCACAGAGGACCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGTGAGCATATAAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGAGCTATGAGCCTTTGTaGGCCCTGGGCCATAGATTT +
Preference number: 4 (lower is better)
Translates to: SEHIRGRHAGRDFTCLVQSYEPL*ALGHRF
Trigger: AAATCTATGGCCCAGGGCCCACAAAGGCTCATAGCT...CTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTTATATGCTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CCTTTCCCAAGAAGACAGCAGAAGTGGTTGACTAATTTGAGCTGTGACTGTGACAGCGGCGGAATTGCTTaGAGTTTGAGCGCAGGAACT +
Preference number: 4 (lower is better)
Translates to: PFPRRQQKWLTNLSCDCDSGGIA*SLSAGT
Trigger: AGTTCCTGCGCTCAAACTCCAAGCAATTCCGCCGCT...GTCACAGTCACAGCTCAAATTAGTCAACCACTTCTGCTGTCTTCTTGGGAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CCTTTCCCAAGAAGACAGCAGAAGTGGTTGACTAATTTGAGCTGTGACTGTGACGATGGGAACTTGCTGTaGGTCCTTCATCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: PFPRRQQKWLTNLSCDCDDGNLL*VLHLCH
Trigger: GTGGCAGAGATGAAGGACCCACAGCAAGTTCCCATC...GTCACAGTCACAGCTCAAATTAGTCAACCACTTCTGCTGTCTTCTTGGGAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGTAGAAAAGGATGATGGGAACTTGCTGTaGGTCCTTCATCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: KRETCWERFHLLSPVEKDDGNLL*VLHLCH
Trigger: GTGGCAGAGATGAAGGACCCACAGCAAGTTCCCATC...ATCCTTTTCTACTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp TGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGGCTGGGCTAGATACCTACGGATaGGTGAGGTTGCCCATGTGT +
Preference number: 4 (lower is better)
Translates to: WHRRMRDIPSVDGTSKAGLDTYG*VRLPMC
Trigger: ACACATGGGCAACCTCACCCATCCGTAGGTATCTAG...CCCAGCCTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp TCTTTCTCTCGGGAATGTTTCCTTGCCCACTCTGAGAGTGCCTGTAAGAGATCTCTAGATACCTACGGATaGGTGAGGTTGCCCATGTGT +
Preference number: 4 (lower is better)
Translates to: SFSRECFLAHSESACKRSLDTYG*VRLPMC
Trigger: ACACATGGGCAACCTCACCCATCCGTAGGTATCTAG...AGATCTCTTACAGGCACTCTCAGAGTGGGCAAGGAAACATTCCCGAGAGAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp TCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGGTCATCATTATATGTAGAGCCCCTGTaGCCCAATGCCAGCAGGATC +
Preference number: 4 (lower is better)
Translates to: SSSFPSIQVQVQTGRSSLYVEPL*PNASRI
Trigger: GATCCTGCTGGCATTGGGCCACAGGGGCTCTACATA...TAATGATGACCTTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGGAACTTAATTTGTAGAAAACACCAGATATTATCCTCACAGGAGGTTCTGCAGGGCTGGCTCTTGAGCTaGATGGCCAGGTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RNLICRKHQILSSQEVLQGWLLS*MARCRL
Trigger: CAGCCTGCACCTGGCCATCCAGCTCAAGAGCCAGCC...CTGCAGAACCTCCTGTGAGGATAATATCTGGTGTTTTCTACAAATTAAGTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGATCTCAGTGTCAAAGTGTAGTCTCAGAGGAGTCTTATTTCTGTTTAGGCCCCGCCACGTTTACTTGGTaGGGGTCCACAACAAAGCCC +
Preference number: 4 (lower is better)
Translates to: RSQCQSVVSEESYFCLGPATFTW*GSTTKP
Trigger: GGGCTTTGTTGTGGACCCCCACCAAGTAAACGTGGC...GGGGCCTAAACAGAAATAAGACTCCTCTGAGACTACACTTTGACACTGAGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
3UTR CAA 72 bp GTCACACTGAAGGGGGAGATGATCCCAGCTTTGGAATaGTCAGGAAGTGAGCATATAAGAGGGAGACATGCT +
Preference number: 4 (lower is better)
Translates to: VTLKGEMIPALE*SGSEHIRGRHA
Trigger: AGCATGTCTCCCTCTTATATGCTCACTTCCTGACAATTCCAAAGCTGGGATCATCTCCCCCTTCAGTGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AGATCTCAGTGTCAAAGTGTAGTCTCAGAGGAGTCTTATTTCTGTTTAGGCCCCCTCCAGGCTCTTGATTaGGTAGGGCCACATGTAGCA +
Preference number: 4 (lower is better)
Translates to: RSQCQSVVSEESYFCLGPLQALD*VGPHVA
Trigger: TGCTACATGTGGCCCTACTCAATCAAGAGCCTGGAG...GGGGCCTAAACAGAAATAAGACTCCTCTGAGACTACACTTTGACACTGAGATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AGATCTCAGTGTCAAAGTGTAGTCTCAGAGGAGTCTTATTTCTGTTTAGGCCCCGGGCTGCCTCATCGATaGAAATGTGGGAGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: RSQCQSVVSEESYFCLGPGLPHR*KCGRRS
Trigger: GCTTCTTCTCCCACATTTTCATCGATGAGGCAGCCC...GGGGCCTAAACAGAAATAAGACTCCTCTGAGACTACACTTTGACACTGAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AGATCTCAGTGTCAAAGTGTAGTCTCAGAGGAGTCTTATTTCTGTTTAGGCCCCCTAACCTGGGCACCATaGGAGACAGCACAGATGTGT +
Preference number: 4 (lower is better)
Translates to: RSQCQSVVSEESYFCLGPLTWAP*ETAQMC
Trigger: ACACATCTGTGCTGTCTCTCATGGTGCCCAGGTTAG...GGGGCCTAAACAGAAATAAGACTCCTCTGAGACTACACTTTGACACTGAGATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AGGAACTTAATTTGTAGAAAACACCAGATATTATCCTCACAGGAGGTTCTGCAGTGGTCCCTTCAGCTATaGGCCTTTGTGGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: RNLICRKHQILSSQEVLQWSLQL*AFVGPG
Trigger: CCCAGGGCCCACAAAGGCTCATAGCTGAAGGGACCA...CTGCAGAACCTCCTGTGAGGATAATATCTGGTGTTTTCTACAAATTAAGTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AGTGAGCATATAAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGGGCCTCTGTACTTCTTaGAAACACTGTCAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SEHIRGRHAGRDFTCLVQGLCTS*KHCQAA
Trigger: AGCAGCTTGACAGTGTTTTCAAGAAGTACAGAGGCC...CTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTTATATGCTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AGTGAGCATATAAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGGATGCTGTTTTCAGTTaGCGCACTGCTTCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: SEHIRGRHAGRDFTCLVQDAVFS*RTASSL
Trigger: CAAGGAAGAAGCAGTGCGTCAACTGAAAACAGCATC...CTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTTATATGCTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp TCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGGTCATCATTACATCTGCTCCTGGTTTaGCCTGTGGAACCAGTACAC +
Preference number: 4 (lower is better)
Translates to: SSSFPSIQVQVQTGRSSLHLLLV*PVEPVH
Trigger: GTGTACTGGTTCCACAGGTCAAACCAGGAGCAGATG...TAATGATGACCTTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp GGACATAGGTATGGAAGCATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTTCTAAGATCCTCCTTTaGGAATATTTTCCCTTCCCG +
Preference number: 4 (lower is better)
Translates to: GHRYGSMVKNRPRSAGYLSKILL*EYFPFP
Trigger: CGGGAAGGGAAAATATTCTCAAAGGAGGATCTTAGA...AAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATGCTTCCATACCTATGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp GGACCTTGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGTGTGTCTGGCCTAGCTaGAACTTCAGCTTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: GPWHRRMRDIPSVDGTSKCVWPS*NFSFWR
Trigger: TCTCCAGAAGCTGAAGTTGCAGCTAGGCCAGACACA...CTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCAAGGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp TGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGGCTGGGCCGGATATAGATGTCTaGAGCACTGTTGGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: WHRRMRDIPSVDGTSKAGPDIDV*STVGVC
Trigger: ACACACACCAACAGTGCTGCAGACATCTATATCCGG...CCCAGCCTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp TGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGGCTGGGCTCCAGCATTTGGGCTaGCTCATCGATGAAAATGTG +
Preference number: 4 (lower is better)
Translates to: WHRRMRDIPSVDGTSKAGLQHLG*LIDENV
Trigger: CACATTTTCATCGATGAGGCAGCCCAAATGCTGGAG...CCCAGCCTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGGAACTTAATTTGTAGAAAACACCAGATATTATCCTCACAGGAGGTTCTGCAGTACAGGAAGAGGCGGTaGAGCAGCGTGTGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: RNLICRKHQILSSQEVLQYRKRR*SSVCLA
Trigger: AGCCAGGCACACGCTGCTGCACCGCCTCTTCCTGTA...CTGCAGAACCTCCTGTGAGGATAATATCTGGTGTTTTCTACAAATTAAGTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGGAGGTTCTGCAGCCAGGCCTTAGAAGCCCCAGATGTCCTGGTGTATATTTCATGGGTCCTTCATCTCTaGCACAAAAATCTTAGTCAC +
Preference number: 4 (lower is better)
Translates to: RRFCSQALEAPDVLVYISWVLHL*HKNLSH
Trigger: GTGACTAAGATTTTTGTGGCAGAGATGAAGGACCCA...TGAAATATACACCAGGACATCTGGGGCTTCTAAGGCCTGGCTGCAGAACCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp TCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGGTCATCATTACGGTGGATGGGAACTTaGTGTGGGTCCTTCATCTCT +
Preference number: 4 (lower is better)
Translates to: SSSFPSIQVQVQTGRSSLRWMGT*CGSFIS
Trigger: AGAGATGAAGGACCCACAGCAAGTTCCCATCCACCG...TAATGATGACCTTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGGAACTTAATTTGTAGAAAACACCAGATATTATCCTCACAGGAGGTTCTGCAGGGCTTGAGGGTCTCATaGCTCACACGCTGCACCTGG +
Preference number: 4 (lower is better)
Translates to: RNLICRKHQILSSQEVLQGLRVS*LTRCTW
Trigger: CCAGGTGCAGCGTGTGAGGCATGAGACCCTCAAGCC...CTGCAGAACCTCCTGTGAGGATAATATCTGGTGTTTTCTACAAATTAAGTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCCTTCTGGAGAAGCACTaGCCTGCGACCAAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: STNRKVIIIKPASSTGSSLLEKH*PATKVK
Trigger: TTTGACTTTGGTCGCAGGCCAGTGCTTCTCCAGAAG...GCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp TCTTTCTCTCGGGAATGTTTCCTTGCCCACTCTGAGAGTGCCTGTAAGAGATCTTCACACTCCAGCATTTaGGCTGCCTCATCGATGAAA +
Preference number: 4 (lower is better)
Translates to: SFSRECFLAHSESACKRSSHSSI*AASSMK
Trigger: TTTCATCGATGAGGCAGCCCAAATGCTGGAGTGTGA...AGATCTCTTACAGGCACTCTCAGAGTGGGCAAGGAAACATTCCCGAGAGAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp CCTTTCCCAAGAAGACAGCAGAAGTGGTTGACTAATTTGAGCTGTGACTGTGACTGGTCTTGCAGAGCCTaGTGCACATGGCTTGAAAAG +
Preference number: 4 (lower is better)
Translates to: PFPRRQQKWLTNLSCDCDWSCRA*CTWLEK
Trigger: CTTTTCAAGCCATGTGCACCAGGCTCTGCAAGACCA...GTCACAGTCACAGCTCAAATTAGTCAACCACTTCTGCTGTCTTCTTGGGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGTAGAAAAGGATCCTGAGGCTCTGATTTaGTCTTCCTTCCTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: KRETCWERFHLLSPVEKDPEALI*SSFLRG
Trigger: ACCTCTCAGGAAGGAAGACCAAATCAGAGCCTCAGG...ATCCTTTTCTACTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp TCTTTCTCTCGGGAATGTTTCCTTGCCCACTCTGAGAGTGCCTGTAAGAGATCTATGATGGCATCCCTGTaGTACCTCTCAAAGAGAGAC +
Preference number: 4 (lower is better)
Translates to: SFSRECFLAHSESACKRSMMASL*YLSKRD
Trigger: GTCTCTCTTTGAGAGGTACCACAGGGATGCCATCAT...AGATCTCTTACAGGCACTCTCAGAGTGGGCAAGGAAACATTCCCGAGAGAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCATGGCCACGTTTACTTaGTGGGGGTCCACAACAAAG +
Preference number: 4 (lower is better)
Translates to: STNRKVIIIKPASSTGSSMATFT*WGSTTK
Trigger: CTTTGTTGTGGACCCCCACCAAGTAAACGTGGCCAT...GCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGTAGAAAAGGATATGGCCACGTTTACTTaGTGGGGGTCCACAACAAAG +
Preference number: 4 (lower is better)
Translates to: KRETCWERFHLLSPVEKDMATFT*WGSTTK
Trigger: CTTTGTTGTGGACCCCCACCAAGTAAACGTGGCCAT...ATCCTTTTCTACTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp TCTTTCTCTCGGGAATGTTTCCTTGCCCACTCTGAGAGTGCCTGTAAGAGATCTTTCTCAAATGCCTCTTaGGAATTACAGGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: SFSRECFLAHSESACKRSFSNAS*ELQVTR
Trigger: CCTGGTCACCTGTAATTCTCAAGAGGCATTTGAGAA...AGATCTCTTACAGGCACTCTCAGAGTGGGCAAGGAAACATTCCCGAGAGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AGGAACTTAATTTGTAGAAAACACCAGATATTATCCTCACAGGAGGTTCTGCAGTGGAGCTCACGAGCCTaGGAAGTGGTGGTGACCACT +
Preference number: 4 (lower is better)
Translates to: RNLICRKHQILSSQEVLQWSSRA*EVVVTT
Trigger: AGTGGTCACCACCACTTCTCAGGCTCGTGAGCTCCA...CTGCAGAACCTCCTGTGAGGATAATATCTGGTGTTTTCTACAAATTAAGTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp CCTTTCCCAAGAAGACAGCAGAAGTGGTTGACTAATTTGAGCTGTGACTGTGACGGCCTCTGTACTTCTTaGAAACACTGTCAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PFPRRQQKWLTNLSCDCDGLCTS*KHCQAA
Trigger: AGCAGCTTGACAGTGTTTTCAAGAAGTACAGAGGCC...GTCACAGTCACAGCTCAAATTAGTCAACCACTTCTGCTGTCTTCTTGGGAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp GGACCTTGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGTTTGGTCTTCCTTCCTaGGAGGTCTTGCCAAACAGA +
Preference number: 4 (lower is better)
Translates to: GPWHRRMRDIPSVDGTSKFGLPS*EVLPNR
Trigger: TCTGTTTGGCAAGACCTCTCAGGAAGGAAGACCAAA...CTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCAAGGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGGAACTTAATTTGTAGAAAACACCAGATATTATCCTCACAGGAGGTTCTGCAGAGCTTGGCTACTAGCTaGTGCTGGGCTGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: RNLICRKHQILSSQEVLQSLATS*CWAASS
Trigger: GGAGGAAGCAGCCCAGCAGCAGCTAGTAGCCAAGCT...CTGCAGAACCTCCTGTGAGGATAATATCTGGTGTTTTCTACAAATTAAGTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCCCGGATATAGATGTCTaGAGCACTGTTGGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: STNRKVIIIKPASSTGSSPDIDV*STVGVC
Trigger: ACACACACCAACAGTGCTGCAGACATCTATATCCGG...GCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGGAACTTAATTTGTAGAAAACACCAGATATTATCCTCACAGGAGGTTCTGCAGCCTGGCCGTTCCATGTaGTCCAGACAGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: RNLICRKHQILSSQEVLQPGRSM*SRQRLK
Trigger: CTTCAGCCTCTGTCTGGAGCACATGGAACGGCCAGG...CTGCAGAACCTCCTGTGAGGATAATATCTGGTGTTTTCTACAAATTAAGTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGTAGAAAAGGATATGGCACAGAGTAGTTaGAAGTGGCCACCAAACTCT +
Preference number: 4 (lower is better)
Translates to: KRETCWERFHLLSPVEKDMAQSS*KWPPNS
Trigger: AGAGTTTGGTGGCCACTTCCAACTACTCTGTGCCAT...ATCCTTTTCTACTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGATCTCAGTGTCAAAGTGTAGTCTCAGAGGAGTCTTATTTCTGTTTAGGCCCCACCCCTACCTTGTATTaGGCTGGGGAGCTTTGTACA +
Preference number: 4 (lower is better)
Translates to: RSQCQSVVSEESYFCLGPTPTLY*AGELCT
Trigger: TGTACAAAGCTCCCCAGCCCAATACAAGGTAGGGGT...GGGGCCTAAACAGAAATAAGACTCCTCTGAGACTACACTTTGACACTGAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGTAGAAAAGGATGTCATAGGGTCAATCTaGAACTGCACCTCCAAGATG +
Preference number: 4 (lower is better)
Translates to: KRETCWERFHLLSPVEKDVIGSI*NCTSKM
Trigger: CATCTTGGAGGTGCAGTTCCAGATTGACCCTATGAC...ATCCTTTTCTACTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp TACAGGGTGCCCAGTGCAACCATAGATAGATCTCAGTGTCAAAGTGTAGTCTCATTTTTGCTCTGTCTCTaGGCCCCTAGCTTTGAGTGT +
Preference number: 4 (lower is better)
Translates to: YRVPSATIDRSQCQSVVSFLLCL*APSFEC
Trigger: ACACTCAAAGCTAGGGGCCCAGAGACAGAGCAAAAA...TGAGACTACACTTTGACACTGAGATCTATCTATGGTTGCACTGGGCACCCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGTAGAAAAGGATTCTCAGCACCTCTTCTaGAACCTTCTCCATGGTCAT +
Preference number: 4 (lower is better)
Translates to: KRETCWERFHLLSPVEKDSQHLF*NLLHGH
Trigger: ATGACCATGGAGAAGGTTCCAGAAGAGGTGCTGAGA...ATCCTTTTCTACTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp TCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGGTCATCATTACCTGAGGCTCTGATTTaGTCTTCCTTCCTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: SSSFPSIQVQVQTGRSSLPEALI*SSFLRG
Trigger: ACCTCTCAGGAAGGAAGACCAAATCAGAGCCTCAGG...TAATGATGACCTTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGGAACTTAATTTGTAGAAAACACCAGATATTATCCTCACAGGAGGTTCTGCAGAGCAGCTTCTGCTCATaGCCCTGCACAGAGCCGAAG +
Preference number: 4 (lower is better)
Translates to: RNLICRKHQILSSQEVLQSSFCS*PCTEPK
Trigger: CTTCGGCTCTGTGCAGGGCCATGAGCAGAAGCTGCT...CTGCAGAACCTCCTGTGAGGATAATATCTGGTGTTTTCTACAAATTAAGTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
3UTR CAA 72 bp CCTTTCCCAAGAAGACAGCAGAAGTGGTTGACTAATTaGAGCTGTGACTGTGACCTGTGGCAATCCTCTGTA +
Preference number: 4 (lower is better)
Translates to: PFPRRQQKWLTN*SCDCDLWQSSV
Trigger: TACAGAGGATTGCCACAGGTCACAGTCACAGCTCAAATTAGTCAACCACTTCTGCTGTCTTCTTGGGAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp AGGAACTTAATTTGTAGAAAACACCAGATATTATCCTCACAGGAGGTTCTGCAGGTGACCACTAAACGGTaGTGTACCAGCTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: RNLICRKHQILSSQEVLQVTTKR*CTSSGP
Trigger: AGGCCCAGAGCTGGTACATCACCGTTTAGTGGTCAC...CTGCAGAACCTCCTGTGAGGATAATATCTGGTGTTTTCTACAAATTAAGTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp TACAGGGTGCCCAGTGCAACCATAGATAGATCTCAGTGTCAAAGTGTAGTCTCAGGGCATCAAATTTTCTaGTCTCTGCTGCATATGGGT +
Preference number: 4 (lower is better)
Translates to: YRVPSATIDRSQCQSVVSGHQIF*SLLHMG
Trigger: ACCCATATGCAGCAGAGATCAGAAAATTTGATGCCC...TGAGACTACACTTTGACACTGAGATCTATCTATGGTTGCACTGGGCACCCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp TACAGGGTGCCCAGTGCAACCATAGATAGATCTCAGTGTCAAAGTGTAGTCTCACACGGCCCACATACATaGAGTAGTTTAAAGGATGTC +
Preference number: 4 (lower is better)
Translates to: YRVPSATIDRSQCQSVVSHGPHT*SSLKDV
Trigger: GACATCCTTTAAACTACTGCATGTATGTGGGCCGTG...TGAGACTACACTTTGACACTGAGATCTATCTATGGTTGCACTGGGCACCCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGGAACTTAATTTGTAGAAAACACCAGATATTATCCTCACAGGAGGTTCTGCAGTTGGCTACTAGCTGCTaGTGGGCTGCTTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: RNLICRKHQILSSQEVLQLATSC*WAASSS
Trigger: TGAGGAGGAAGCAGCCCAGCAGCAGCTAGTAGCCAA...CTGCAGAACCTCCTGTGAGGATAATATCTGGTGTTTTCTACAAATTAAGTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGGAACTTAATTTGTAGAAAACACCAGATATTATCCTCACAGGAGGTTCTGCAGCTCATCCCCCGTGAATaGCATCCCACAGTTCAGACG +
Preference number: 4 (lower is better)
Translates to: RNLICRKHQILSSQEVLQLIPRE*HPTVQT
Trigger: CGTCTGAACTGTGGGATGGCATTCACGGGGGATGAG...CTGCAGAACCTCCTGTGAGGATAATATCTGGTGTTTTCTACAAATTAAGTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGTAGAAAAGGATTCTGTGTGTGCTTGTTaGTCACAAGGAATTCAGCCA +
Preference number: 4 (lower is better)
Translates to: KRETCWERFHLLSPVEKDSVCAC*SQGIQP
Trigger: TGGCTGAATTCCTTGTGAGCAACAAGCACACACAGA...ATCCTTTTCTACTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGGAACTTAATTTGTAGAAAACACCAGATATTATCCTCACAGGAGGTTCTGCAGCTCAGTGGCCATGCCTaGCTCGTCGATAAGGATCTG +
Preference number: 4 (lower is better)
Translates to: RNLICRKHQILSSQEVLQLSGHA*LVDKDL
Trigger: CAGATCCTTATCGACGAGGCAGGCATGGCCACTGAG...CTGCAGAACCTCCTGTGAGGATAATATCTGGTGTTTTCTACAAATTAAGTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp GGACCTTGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGGAACAGATGTCCTTATaGATACGGTACTGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: GPWHRRMRDIPSVDGTSKEQMSL*IRYCVS
Trigger: GGACACACAGTACCGTATGCATAAGGACATCTGTTC...CTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCAAGGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGGAACTTAATTTGTAGAAAACACCAGATATTATCCTCACAGGAGGTTCTGCAGGGTGTGACCTGCATGTaGTCCCCTGCCAGTACTACA +
Preference number: 4 (lower is better)
Translates to: RNLICRKHQILSSQEVLQGVTCM*SPASTT
Trigger: TGTAGTACTGGCAGGGGACCACATGCAGGTCACACC...CTGCAGAACCTCCTGTGAGGATAATATCTGGTGTTTTCTACAAATTAAGTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp TCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGGTCATCATTATTTTTGCTCTGTCTCTaGGCCCCTAGCTTTGAGTGT +
Preference number: 4 (lower is better)
Translates to: SSSFPSIQVQVQTGRSSLFLLCL*APSFEC
Trigger: ACACTCAAAGCTAGGGGCCCAGAGACAGAGCAAAAA...TAATGATGACCTTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGGAACTTAATTTGTAGAAAACACCAGATATTATCCTCACAGGAGGTTCTGCAGTCAGTGTTCGAGTGGTaGCACAGGTGCAGGGACAGA +
Preference number: 4 (lower is better)
Translates to: RNLICRKHQILSSQEVLQSVFEW*HRCRDR
Trigger: TCTGTCCCTGCACCTGTGCCACCACTCGAACACTGA...CTGCAGAACCTCCTGTGAGGATAATATCTGGTGTTTTCTACAAATTAAGTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGGAACTTAATTTGTAGAAAACACCAGATATTATCCTCACAGGAGGTTCTGCAGTATGTAGAGCCCCTGTaGCCCAATGCCAGCAGGATC +
Preference number: 4 (lower is better)
Translates to: RNLICRKHQILSSQEVLQYVEPL*PNASRI
Trigger: GATCCTGCTGGCATTGGGCCACAGGGGCTCTACATA...CTGCAGAACCTCCTGTGAGGATAATATCTGGTGTTTTCTACAAATTAAGTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCTTGATGCATTTCTCCTaGAGAAAAGCAGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: STNRKVIIIKPASSTGSSLMHFS*RKAASS
Trigger: GCTGGAAGCTGCTTTTCTCCAGGAGAAATGCATCAA...GCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp TCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGGTCATCATTACAAAGAGAGGATATGTaGGCAGATCTCCTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: SSSFPSIQVQVQTGRSSLQREDM*ADLLSE
Trigger: TTCAGAGAGGAGATCTGCTCACATATCCTCTCTTTG...TAATGATGACCTTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp GGACCTTGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGGCAGTGGTTCTCAAATaGCTCTTGAGAATTACAGGT +
Preference number: 4 (lower is better)
Translates to: GPWHRRMRDIPSVDGTSKAVVLK*LLRITG
Trigger: ACCTGTAATTCTCAAGAGGCATTTGAGAACCACTGC...CTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCAAGGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGTAGAAAAGGATGCAGTGGTTCTCAAATaGCTCTTGAGAATTACAGGT +
Preference number: 4 (lower is better)
Translates to: KRETCWERFHLLSPVEKDAVVLK*LLRITG
Trigger: ACCTGTAATTCTCAAGAGGCATTTGAGAACCACTGC...ATCCTTTTCTACTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGGAACTTAATTTGTAGAAAACACCAGATATTATCCTCACAGGAGGTTCTGCAGGCAGGATCTCAAAGCTaGCCACAGACACCTCACCAA +
Preference number: 4 (lower is better)
Translates to: RNLICRKHQILSSQEVLQAGSQS*PQTPHQ
Trigger: TTGGTGAGGTGTCTGTGGGCAGCTTTGAGATCCTGC...CTGCAGAACCTCCTGTGAGGATAATATCTGGTGTTTTCTACAAATTAAGTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGATCTCAGTGTCAAAGTGTAGTCTCAGAGGAGTCTTATTTCTGTTTAGGCCCCTCTGTGTGTGCTTGTTaGTCACAAGGAATTCAGCCA +
Preference number: 4 (lower is better)
Translates to: RSQCQSVVSEESYFCLGPSVCAC*SQGIQP
Trigger: TGGCTGAATTCCTTGTGAGCAACAAGCACACACAGA...GGGGCCTAAACAGAAATAAGACTCCTCTGAGACTACACTTTGACACTGAGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGGAACTTAATTTGTAGAAAACACCAGATATTATCCTCACAGGAGGTTCTGCAGCTGTCAGTTGGCATCTaGTCCTGGTTTGACCTGTGG +
Preference number: 4 (lower is better)
Translates to: RNLICRKHQILSSQEVLQLSVGI*SWFDLW
Trigger: CCACAGGTCAAACCAGGAGCAGATGCCAACTGACAG...CTGCAGAACCTCCTGTGAGGATAATATCTGGTGTTTTCTACAAATTAAGTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp TCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGGTCATCATTAAAATTTTCTGATCTCTaGTGCATATGGGTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: SSSFPSIQVQVQTGRSSLKFSDL*CIWVGG
Trigger: GCCCCCAACCCATATGCAGCAGAGATCAGAAAATTT...TAATGATGACCTTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGTAGAAAAGGATGGATGGGATTACCCTTaGCTAAATAGAAATGATGGG +
Preference number: 4 (lower is better)
Translates to: KRETCWERFHLLSPVEKDGWDYP*LNRNDG
Trigger: CCCATCATTTCTATTTAGCCAAGGGTAATCCCATCC...ATCCTTTTCTACTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGGAACTTAATTTGTAGAAAACACCAGATATTATCCTCACAGGAGGTTCTGCAGATCTCTGCAGAGCCTTaGAAACTGAGGCTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: RNLICRKHQILSSQEVLQISAEP*KLRLGL
Trigger: CAGACCCAGCCTCAGTTTCCAAGGCTCTGCAGAGAT...CTGCAGAACCTCCTGTGAGGATAATATCTGGTGTTTTCTACAAATTAAGTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp TCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGGTCATCATTATGGTCATGTGATGGATaGGAAAATATACCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: SSSFPSIQVQVQTGRSSLWSCDG*ENIPAW
Trigger: CCAAGCAGGTATATTTTCTCATCCATCACATGACCA...TAATGATGACCTTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp TCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGGTCATCATTATCTAAGATCCTCCTTTaGGAATATTTTCCCTTCCCG +
Preference number: 4 (lower is better)
Translates to: SSSFPSIQVQVQTGRSSLSKILL*EYFPFP
Trigger: CGGGAAGGGAAAATATTCTCAAAGGAGGATCTTAGA...TAATGATGACCTTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGGAACTTAATTTGTAGAAAACACCAGATATTATCCTCACAGGAGGTTCTGCAGACCCCTACCTTGTATTaGGCTGGGGAGCTTTGTACA +
Preference number: 4 (lower is better)
Translates to: RNLICRKHQILSSQEVLQTPTLY*AGELCT
Trigger: TGTACAAAGCTCCCCAGCCCAATACAAGGTAGGGGT...CTGCAGAACCTCCTGTGAGGATAATATCTGGTGTTTTCTACAAATTAAGTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR TCA 90 bp TCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGGTCATCATTATTCTCCATGGTCATGTaGTGGATGAGAAAATATACC +
Preference number: 4 (lower is better)
Translates to: SSSFPSIQVQVQTGRSSLFSMVM*WMRKYT
Trigger: GGTATATTTTCTCATCCATCACATGACCATGGAGAA...TAATGATGACCTTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR GCA 90 bp AGGAACTTAATTTGTAGAAAACACCAGATATTATCCTCACAGGAGGTTCTGCAGCAACGGTCTTCCCAGTaGCCTTGTGAAAAGAATGCT +
Preference number: 4 (lower is better)
Translates to: RNLICRKHQILSSQEVLQQRSSQ*PCEKNA
Trigger: AGCATTCTTTTCACAAGGGCACTGGGAAGACCGTTG...CTGCAGAACCTCCTGTGAGGATAATATCTGGTGTTTTCTACAAATTAAGTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp GGACCTTGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGCTTTACTTTCTCCCTTaGATGAAAACGCTTATCTTG +
Preference number: 4 (lower is better)
Translates to: GPWHRRMRDIPSVDGTSKLYFLP*MKTLIL
Trigger: CAAGATAAGCGTTTTCATCCAAGGGAGAAAGTAAAG...CTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCAAGGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CCA 90 bp AGATCTCAGTGTCAAAGTGTAGTCTCAGAGGAGTCTTATTTCTGTTTAGGCCCCCTTTACTTTCTCCCTTaGATGAAAACGCTTATCTTG +
Preference number: 4 (lower is better)
Translates to: RSQCQSVVSEESYFCLGPLYFLP*MKTLIL
Trigger: CAAGATAAGCGTTTTCATCCAAGGGAGAAAGTAAAG...GGGGCCTAAACAGAAATAAGACTCCTCTGAGACTACACTTTGACACTGAGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp CCCAGAAAAGCAAAGGGAGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCTGCTGGCGAGGCCAGTaGCCGCGGCAGGGCTCGGGG +
Preference number: 5 (lower is better)
Translates to: PRKAKGVGRKGPTSSSFPCWRGQ*PRQGSG
Trigger: CCCCGAGCCCTGCCGCGGCAACTGGCCTCGCCAGCA...GGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACTCCCTTTGCTTTTCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp ACCACGTGGCGGTTGCCTGTGTGCCAGCATTCCAGCTCCTGGGGGTaGCTGGGTGCTGGCTTCCCATTTAGGCCCTGGCTGTGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: TTWRLPVCQHSSSWG*LGAGFPFRPWLCVW
Trigger: CCAGACACACAGCCAGGGCCTAAATGGGAAGCCAGCACCCAGCCACCCCCAGGAGCTGGAATGCTGGCACACAGGCAACCGCCACGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp TGCACCGAGTACATGCGGCGCCGCCATACAAGCCGCACGCCTGTCTaGCTCACTAGCTCCTGGGGGTGCTCAGCCAACTGCAGGGAATGG +
Preference number: 5 (lower is better)
Translates to: CTEYMRRRHTSRTPV*LTSSWGCSANCREW
Trigger: CCATTCCCTGCAGTTGGCTGAGCACCCCCAGGAGCTAGTGAGCCAGACAGGCGTGCGGCTTGTATGGCGGCGCCGCATGTACTCGGTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp TCGGGTGTCCAATCTACCTCAAGCACCACGTGGCGGTTGCCTGTGTaGCAGCATTCCAGCTCCTGGGGGTGGCTGGGTGCTGGCTTCCCA +
Preference number: 5 (lower is better)
Translates to: SGVQSTSSTTWRLPV*QHSSSWGWLGAGFP
Trigger: TGGGAAGCCAGCACCCAGCCACCCCCAGGAGCTGGAATGCTGGCACACAGGCAACCGCCACGTGGTGCTTGAGGTAGATTGGACACCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp CTTCCTGCTCGGGTGTCCAATCTACCTCAAGCACCACGTGGCGGTTaGCTGTGTGCCAGCATTCCAGCTCCTGGGGGTGGCTGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: LPARVSNLPQAPRGG*LCASIPAPGGGWVL
Trigger: CAGCACCCAGCCACCCCCAGGAGCTGGAATGCTGGCACACAGGCAACCGCCACGTGGTGCTTGAGGTAGATTGGACACCCGAGCAGGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp GCTGGCGGGCTTCCACGTCCAGGGCCCCATCCTTGGGCACCAAGCTaGCCACATCAGCAATATGCACTGCCACCTCGTACACTGGGCCTA +
Preference number: 5 (lower is better)
Translates to: AGGLPRPGPHPWAPS*PHQQYALPPRTLGL
Trigger: TAGGCCCAGTGTACGAGGTGGCAGTGCATATTGCTGATGTGGCCAGCTTGGTGCCCAAGGATGGGGCCCTGGACGTGGAAGCCCGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp AGAAGCCCGCTGGCACCTGGAGCTCACGAGCCTGAGAAGTGGTGGTaGCCACTAAACGGTGATGTACCAGCTCTGGGCCTGTGGGTGGGC +
Preference number: 5 (lower is better)
Translates to: RSPLAPGAHEPEKWW*PLNGDVPALGLWVG
Trigger: GCCCACCCACAGGCCCAGAGCTGGTACATCACCGTTTAGTGGTCACCACCACTTCTCAGGCTCGTGAGCTCCAGGTGCCAGCGGGCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp GGCCCCTGGTGGTGCGAAGAGCATGCCGAGTGCTGGTGTCTCCAGTaGTGTCTTCAGGGATACCTGGCCCTTCATGGCCAGCTTGGCTAC +
Preference number: 5 (lower is better)
Translates to: GPWWCEEHAECWCLQ*CLQGYLALHGQLGY
Trigger: GTAGCCAAGCTGGCCATGAAGGGCCAGGTATCCCTGAAGACAGCACTGGAGACACCAGCACTCGGCATGCTCTTCGCACCACCAGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp TTGGAGAGTCCCATTGGTGGGGCACGGTGTTTCCAGGGCACAGCCTaGTCAAAGGCCACCATCTGTGCGTGCTCCAGGGAGGAGCAGTGG +
Preference number: 5 (lower is better)
Translates to: LESPIGGARCFQGTA*SKATICACSREEQW
Trigger: CCACTGCTCCTCCCTGGAGCACGCACAGATGGTGGCCTTTGACCAGGCTGTGCCCTGGAAACACCGTGCCCCACCAATGGGACTCTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp AGCCACAGCGCATGGTCTGAACTGGCCCGTGCCTCCAGCCGCACTTaGTATACTGTACTGTTAGGCGCAGGCACGGGAGCCACAAGGGCT +
Preference number: 5 (lower is better)
Translates to: SHSAWSELARASSRT*YTVLLGAGTGATRA
Trigger: AGCCCTTGTGGCTCCCGTGCCTGCGCCTAACAGTACAGTATACCAAGTGCGGCTGGAGGCACGGGCCAGTTCAGACCATGCGCTGTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp AAGTCTAGGAGACGGTGCCAGAGTGGGCAGCAGCGTAGCAGTAGATaGTCCCCAATGATGCACAACGCCTCCTGGGCCCGGGTGATGGCC +
Preference number: 5 (lower is better)
Translates to: KSRRRCQSGQQRSSR*SPMMHNASWARVMA
Trigger: GGCCATCACCCGGGCCCAGGAGGCGTTGTGCATCATTGGGGACCATCTACTGCTACGCTGCTGCCCACTCTGGCACCGTCTCCTAGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp CCACCTTTCTCCATGGTGAGGAAGAGAGAGATGGCGAGGCGATCCTaGCCAGGGAGAAGGCTGAGTGCATCCTGGCACAAGCTGGCGGGC +
Preference number: 5 (lower is better)
Translates to: PPFSMVRKREMARRS*PGRRLSASWHKLAG
Trigger: GCCCGCCAGCTTGTGCCAGGATGCACTCAGCCTTCTCCCTGGTCAGGATCGCCTCGCCATCTCTCTCTTCCTCACCATGGAGAAAGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp TCCAGGGCGCAGCGTGGCCCCCAGGCACCTGAGTACTCGCCGACTTaGAGGTACTGGTCTTGCAGAGCCTGGTGCACATGGCTTGAAAAG +
Preference number: 5 (lower is better)
Translates to: SRAQRGPQAPEYSPT*RYWSCRAWCTWLEK
Trigger: CTTTTCAAGCCATGTGCACCAGGCTCTGCAAGACCAGTACCTTCAAGTCGGCGAGTACTCAGGTGCCTGGGGGCCACGCTGCGCCCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp TGTGCAGATGAGCACCTTGGTGTGGGGCTGCTGGACAACCTCAAGTaGGGCCATGGCCAATGTGTACGTCTTGCCGGTGCCAAAGGGGCC +
Preference number: 5 (lower is better)
Translates to: CADEHLGVGLLDNLK*GHGQCVRLAGAKGA
Trigger: GGCCCCTTTGGCACCGGCAAGACGTACACATTGGCCATGGCCGCACTTGAGGTTGTCCAGCAGCCCCACACCAAGGTGCTCATCTGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp GGCCAGGTGCAGGCTGTAGGCCCTCCGTTGGTAGCTCTGGGCACTTaGATACTGGCGACTGAAGTCCAGGCAGAGCCCATCAATGTCCCT +
Preference number: 5 (lower is better)
Translates to: GQVQAVGPPLVALGT*ILATEVQAEPINVP
Trigger: AGGGACATTGATGGGCTCTGCCTGGACTTCAGTCGCCAGTATGCAAGTGCCCAGAGCTACCAACGGAGGGCCTACAGCCTGCACCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp ACAGAGGCTGAAGCCAGGGACCACAGTCCACAGCTTCAGGGTTGGTaGCAGGAAACCCCGCTGCAGGCTGGAACCAAGCTGAACCTGCAG +
Preference number: 5 (lower is better)
Translates to: TEAEARDHSPQLQGW*QETPLQAGTKLNLQ
Trigger: CTGCAGGTTCAGCTTGGTTCCAGCCTGCAGCGGGGTTTCCTGGCACCAACCCTGAAGCTGTGGACTGTGGTCCCTGGCTTCAGCCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp CACCCACTGGTGCTGGATCTTCTCCTGGGCCTGATGCACCGGTGGTaGGTGGCAAGTGACAGACACTCCACGGATGGTCTCAGCCATCAC +
Preference number: 5 (lower is better)
Translates to: HPLVLDLLLGLMHRW*VASDRHSTDGLSHH
Trigger: GTGATGGCTGAGACCATCCGTGGAGTGTCTGTCACTTGCCACCCACCACCGGTGCATCAGGCCCAGGAGAAGATCCAGCACCAGTGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp TCCAGCTCCTGGGGGTGGCTGGGTGCTGGCTTCCCATTTAGGCCCTaGCTGTGTGTCTGGCCTAGCTGCAACTTCAGCTTCTGGAGAAGC +
Preference number: 5 (lower is better)
Translates to: SSSWGWLGAGFPFRP*LCVWPSCNFSFWRS
Trigger: GCTTCTCCAGAAGCTGAAGTTGCAGCTAGGCCAGACACACAGCCAGGGCCTAAATGGGAAGCCAGCACCCAGCCACCCCCAGGAGCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp AGCCCTGATCAGTGTCTGGCAACAGAGAGGAGTGGAAGGGGACCTTaGCATAGAGGGCCCCTGGTGGTGCGAAGAGCATGCCGAGTGCTG +
Preference number: 5 (lower is better)
Translates to: SPDQCLATERSGRGP*HRGPLVVRRACRVL
Trigger: CAGCACTCGGCATGCTCTTCGCACCACCAGGGGCCCTCTATGCCAAGGTCCCCTTCCACTCCTCTCTGTTGCCAGACACTGATCAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp TCATCCCCCGTGAATGCCATCCCACAGTTCAGACGGCCCCTGACCTaGATAGGGCTAGAGGCCATGTCGTCCAGCGGAGTGGCCAATGCT +
Preference number: 5 (lower is better)
Translates to: SSPVNAIPQFRRPLT*IGLEAMSSSGVANA
Trigger: AGCATTGGCCACTCCGCTGGACGACATGGCCTCTAGCCCTATCCAGGTCAGGGGCCGTCTGAACTGTGGGATGGCATTCACGGGGGATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp AAGGCTGAGTGCATCCTGGCACAAGCTGGCGGGCAGCATGAGTACTaGCTCCCTATTGGGGGCATAGAACACAGTTCCCTGCTGGCGGGC +
Preference number: 5 (lower is better)
Translates to: KAECILAQAGGQHEY*LPIGGIEHSSLLAG
Trigger: GCCCGCCAGCAGGGAACTGTGTTCTATGCCCCCAATAGGGAGCCAGTACTCATGCTGCCCGCCAGCTTGTGCCAGGATGCACTCAGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp GGGTGTGTGGATCAAGACTCGTGCCCAGAAGTGGTAAAGGCAGCTTaGACGCCTGCACCGAGTACATGCGGCGCCGCCATACAAGCCGCA +
Preference number: 5 (lower is better)
Translates to: GCVDQDSCPEVVKAA*TPAPSTCGAAIQAA
Trigger: TGCGGCTTGTATGGCGGCGCCGCATGTACTCGGTGCAGGCGTCCAAGCTGCCTTTACCACTTCTGGGCACGAGTCTTGATCCACACACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp CAGTCCACAGCTTCAGGGTTGGTGCCAGGAAACCCCGCTGCAGGCTaGAACCAAGCTGAACCTGCAGGGTATCTCCACTGCCCAGCTCGT +
Preference number: 5 (lower is better)
Translates to: QSTASGLVPGNPAAG*NQAEPAGYLHCPAR
Trigger: ACGAGCTGGGCAGTGGAGATACCCTGCAGGTTCAGCTTGGTTCCAGCCTGCAGCGGGGTTTCCTGGCACCAACCCTGAAGCTGTGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp GGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACAGCACCACGTGGCGGTaGCCTGTGTGCCAGCATTCC +
Preference number: 5 (lower is better)
Translates to: GEEQAQKCWVPYSQLPAHSTTWR*PVCQHS
Trigger: GGAATGCTGGCACACAGGCAACCGCCACGTGGTGCT...GTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp AGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTGCCGCAGTCTGTGCCTaGGCTGCTGCCTCGGCTCTG +
Preference number: 5 (lower is better)
Translates to: SWEKGADLQLFPLHSSPSAAVCA*AAASAL
Trigger: CAGAGCCGAGGCAGCAGCCAAGGCACAGACTGCGGC...ACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp CTTCCACACAGCCATCTCCACAGCACTGTGTGCATACTCACAGCGTaGGGCCCCATGGCGGCATGGTACCCCACGGCCCACATACATGCA +
Preference number: 5 (lower is better)
Translates to: LPHSHLHSTVCILTA*GPMAAWYPTAHIHA
Trigger: TGCATGTATGTGGGCCGTGGGGTACCATGCCGCCATGGGGCCTCACGCTGTGAGTATGCACACAGTGCTGTGGAGATGGCTGTGTGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp GAGTGGATGGTGAACACCCACTGGTGCTGGATCTTCTCCTGGGCCTaGTGCACCGGTGGTGGGTGGCAAGTGACAGACACTCCACGGATG +
Preference number: 5 (lower is better)
Translates to: EWMVNTHWCWIFSWA*CTGGGWQVTDTPRM
Trigger: CATCCGTGGAGTGTCTGTCACTTGCCACCCACCACCGGTGCATCAGGCCCAGGAGAAGATCCAGCACCAGTGGGTGTTCACCATCCACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp CTGCTGGTAGTACAGGAAGAGGCGGTGCAGCAGCGTGTGCCTGGCTaGCTTGTCCCTAGGCACGCTGAAGAGCCTAGGTGTGACCTGCAT +
Preference number: 5 (lower is better)
Translates to: LLVVQEEAVQQRVPG*LVPRHAEEPRCDLH
Trigger: ATGCAGGTCACACCTAGGCTCTTCAGCGTGCCTAGGGACAAGTCAGCCAGGCACACGCTGCTGCACCGCCTCTTCCTGTACTACCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp GGCCCAGTTCTGTCTCTGGGCCACACCCTGCTCAATCTGTTCCAGTaGCAGCTCCTCAGGGAAGGCGCTGTGGTGTTCTATGCACTCGCG +
Preference number: 5 (lower is better)
Translates to: GPVLSLGHTLLNLFQ*QLLREGAVVFYALA
Trigger: CGCGAGTGCATAGAACACCACAGCGCCTTCCCTGAGGAGCTGTCACTGGAACAGATTGAGCAGGGTGTGGCCCAGAGACAGAACTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp TCCAGGGCCAGGGAGGGTAACTTGTACTTGGCCATCAGGGCTTCCTaGTCGGGTGTCCAATCTACCTCAAGCACCACGTGGCGGTTGCCT +
Preference number: 5 (lower is better)
Translates to: SRAREGNLYLAIRAS*SGVQSTSSTTWRLP
Trigger: AGGCAACCGCCACGTGGTGCTTGAGGTAGATTGGACACCCGAGCAGGAAGCCCTGATGGCCAAGTACAAGTTACCCTCCCTGGCCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp GGTGCAGGCAGGCAGGTCAGGAACCACCAGGTGCTCCTCGAGCAGTaGATCCACTGCCTGATGCCAGAACCGGAAGGTCATAGGGTCAAT +
Preference number: 5 (lower is better)
Translates to: GAGRQVRNHQVLLEQ*IHCLMPEPEGHRVN
Trigger: ATTGACCCTATGACCTTCCGGTTCTGGCATCAGGCAGTGGATGCACTGCTCGAGGAGCACCTGGTGGTTCCTGACCTGCCTGCCTGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp CCCGCTGCAGGCTGGAACCAAGCTGAACCTGCAGGGTATCTCCACTaGCCAGCTCGTAGACCACCTCTACAAAGTGTCCACAGCGGCTCT +
Preference number: 5 (lower is better)
Translates to: PAAGWNQAEPAGYLH*PARRPPLQSVHSGS
Trigger: AGAGCCGCTGTGGACACTTTGTAGAGGTGGTCTACGAGCTGGGCAGTGGAGATACCCTGCAGGTTCAGCTTGGTTCCAGCCTGCAGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp GAACACCCACTGGTGCTGGATCTTCTCCTGGGCCTGATGCACCGGTaGTGGGTGGCAAGTGACAGACACTCCACGGATGGTCTCAGCCAT +
Preference number: 5 (lower is better)
Translates to: EHPLVLDLLLGLMHR*WVASDRHSTDGLSH
Trigger: ATGGCTGAGACCATCCGTGGAGTGTCTGTCACTTGCCACCCACCACCGGTGCATCAGGCCCAGGAGAAGATCCAGCACCAGTGGGTGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp GCGGTTGTGGACAGAGCTCAGTACCACCACCCGGAACTCACGCCCTaGCAGGATCTCAAAGCTGCCCACAGACACCTCACCAAGGTTCCT +
Preference number: 5 (lower is better)
Translates to: AVVDRAQYHHPELTP*QDLKAAHRHLTKVP
Trigger: AGGAACCTTGGTGAGGTGTCTGTGGGCAGCTTTGAGATCCTGCCAGGGCGTGAGTTCCGGGTGGTGGTACTGAGCTCTGTCCACAACCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp GACCAGCGGCCGTGTTTAGCTCTGAGCGGTATCTCTGCAGAGCCTTaGAAACTGAGGCTGGGTCTGGTGTGTGGGCCTTCAGGCCATGCT +
Preference number: 5 (lower is better)
Translates to: DQRPCLALSGISAEP*KLRLGLVCGPSGHA
Trigger: AGCATGGCCTGAAGGCCCACACACCAGACCCAGCCTCAGTTTCCAAGGCTCTGCAGAGATACCGCTCAGAGCTAAACACGGCCGCTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp GTAGCAGGCAGCTACAACACAGGCCTCCACAGAGTCCAGGTGGGCTaGAAGCTCCAGGCCAGCCCCAGGGTGTCTCTTGATCAGTTCTTC +
Preference number: 5 (lower is better)
Translates to: VAGSYNTGLHRVQVG*KLQASPRVSLDQFF
Trigger: GAAGAACTGATCAAGAGACACCCTGGGGCTGGCCTGGAGCTTCCAGCCCACCTGGACTCTGTGGAGGCCTGTGTTGTAGCTGCCTGCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp CAGCAGCGTAGCAGTAGATGGTCCCCAATGATGCACAACGCCTCCTaGGCCCGGGTGATGGCCACGTTTACTTGGTGGGGGTCCACAACA +
Preference number: 5 (lower is better)
Translates to: QQRSSRWSPMMHNAS*ARVMATFTWWGSTT
Trigger: TGTTGTGGACCCCCACCAAGTAAACGTGGCCATCACCCGGGCCCAGGAGGCGTTGTGCATCATTGGGGACCATCTACTGCTACGCTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp CCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACAGGCCAGCTGTTTGTGCAGATGAGCACCTaGGTGTGGGGCTGCTGGACA +
Preference number: 5 (lower is better)
Translates to: PRSAGYLIPSCLPTGQLFVQMST*VWGCWT
Trigger: TGTCCAGCAGCCCCACACCAAGGTGCTCATCTGCAC...AAACAGCTGGCCTGTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp AGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGCCGCAGTCTGTGCCTaGGCTGCTGCCTCGGCTCTG +
Preference number: 5 (lower is better)
Translates to: RGRPPALSPPFKSKYKQEAAVCA*AAASAL
Trigger: CAGAGCCGAGGCAGCAGCCAAGGCACAGACTGCGGC...TTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp TGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGGCTGGGTGCTGGCGAGGCCAGTaGCCGCGGCAGGGCTCGGGG +
Preference number: 5 (lower is better)
Translates to: WHRRMRDIPSVDGTSKAGCWRGQ*PRQGSG
Trigger: CCCCGAGCCCTGCCGCGGCAACTGGCCTCGCCAGCA...CCCAGCCTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp CCATGGCCAATGTGTACGTCTTGCCGGTGCCAAAGGGGCCATAGATaGGCAGTGGTGGGATGTGCTTTGTGCCCTCGGGTCTTCTGCCTG +
Preference number: 5 (lower is better)
Translates to: PWPMCTSCRCQRGHR*AVVGCALCPRVFCL
Trigger: CAGGCAGAAGACCCGAGGGCACAAAGCACATCCCACCACTGCTCATCTATGGCCCCTTTGGCACCGGCAAGACGTACACATTGGCCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp TCTCGACATCCACTACGAAGCCCAGCTTGTTTTGAGGCTGGCTCTTaGGCTGGATGGCCAGGTGCAGGCTGTAGGCCCTCCGTTGGTAGC +
Preference number: 5 (lower is better)
Translates to: SRHPLRSPACFEAGS*AGWPGAGCRPSVGS
Trigger: GCTACCAACGGAGGGCCTACAGCCTGCACCTGGCCATCCAGCTCAAGAGCCAGCCTCAAAACAAGCTGGGCTTCGTAGTGGATGTCGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp GCACTGGCCTGCGACCAAAGTCAAAGACCACCCACTGCTCAAAGCTaGCGAAGGCGACAGCCTGCACAAGCACCCCTACCTTGTATTGGG +
Preference number: 5 (lower is better)
Translates to: ALACDQSQRPPTAQS*RRRQPAQAPLPCIG
Trigger: CCCAATACAAGGTAGGGGTGCTTGTGCAGGCTGTCGCCTTCGGCAGCTTTGAGCAGTGGGTGGTCTTTGACTTTGGTCGCAGGCCAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp TTCTGGAGAAGCACTGGCCTGCGACCAAAGTCAAAGACCACCCACTaGTCAAAGCTGCCGAAGGCGACAGCCTGCACAAGCACCCCTACC +
Preference number: 5 (lower is better)
Translates to: FWRSTGLRPKSKTTH*SKLPKATACTSTPT
Trigger: GGTAGGGGTGCTTGTGCAGGCTGTCGCCTTCGGCAGCTTTGAGCAGTGGGTGGTCTTTGACTTTGGTCGCAGGCCAGTGCTTCTCCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp GGGTCAATCTGGAACTGCACCTCCAAGATGGGGCTGTCTTGGGCCTaGAGCCCCAAAGCCATACAGCATCGTGCTGGTAACAGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: GSIWNCTSKMGLSWA*SPKAIQHRAGNSSH
Trigger: GTGGCTGCTGTTACCAGCACGATGCTGTATGGCTTTGGGGCTGCAGGCCCAAGACAGCCCCATCTTGGAGGTGCAGTTCCAGATTGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp TCCAGGGCCCCATCCTTGGGCACCAAGCTGGCCACATCAGCAATATaGACTGCCACCTCGTACACTGGGCCTAGGTCTCGGACACTAAGA +
Preference number: 5 (lower is better)
Translates to: SRAPSLGTKLATSAI*TATSYTGPRSRTLR
Trigger: TCTTAGTGTCCGAGACCTAGGCCCAGTGTACGAGGTGGCAGTGCATATTGCTGATGTGGCCAGCTTGGTGCCCAAGGATGGGGCCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp GCCTGGTGCACATGGCTTGAAAAGCAGTCACCTGGCCGTTCCATGTaGTCCAGACAGAGGCTGAAGCCAGGGACCACAGTCCACAGCTTC +
Preference number: 5 (lower is better)
Translates to: AWCTWLEKQSPGRSM*SRQRLKPGTTVHSF
Trigger: GAAGCTGTGGACTGTGGTCCCTGGCTTCAGCCTCTGTCTGGAGCACATGGAACGGCCAGGTGACTGCTTTTCAAGCCATGTGCACCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp AGGCTCTTTGATGCCGCACAGGAGCACGTGCACAGGATGACCGAGTaGCGCTCCAGTTCATGTTTGCGTGCCTTCCCCAAGACTCTCCTG +
Preference number: 5 (lower is better)
Translates to: RLFDAAQEHVHRMTE*RSSSCLRAFPKTLL
Trigger: CAGGAGAGTCTTGGGGAAGGCACGCAAACATGAACTGGAGCGGCACTCGGTCATCCTGTGCACGTGCTCCTGTGCGGCATCAAAGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp GAGATCAGGCCTAGGGCAGAGATCGAACTTGGAGAGTCCCATTGGTaGGGCACGGTGTTTCCAGGGCACAGCCTGGTCAAAGGCCACCAT +
Preference number: 5 (lower is better)
Translates to: EIRPRAEIELGESHW*GTVFPGHSLVKGHH
Trigger: ATGGTGGCCTTTGACCAGGCTGTGCCCTGGAAACACCGTGCCCCACCAATGGGACTCTCCAAGTTCGATCTCTGCCCTAGGCCTGATCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp ACAGAGATCAGGCCTAGGGCAGAGATCGAACTTGGAGAGTCCCATTaGTGGGGCACGGTGTTTCCAGGGCACAGCCTGGTCAAAGGCCAC +
Preference number: 5 (lower is better)
Translates to: TEIRPRAEIELGESH*WGTVFPGHSLVKGH
Trigger: GTGGCCTTTGACCAGGCTGTGCCCTGGAAACACCGTGCCCCACCAATGGGACTCTCCAAGTTCGATCTCTGCCCTAGGCCTGATCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp GTGCTGGTGTCTCCAGTGCTGTCTTCAGGGATACCTGGCCCTTCATaGCCAGCTTGGCTACTAGCTGCTGCTGGGCTGCTTCCTCCTCAT +
Preference number: 5 (lower is better)
Translates to: VLVSPVLSSGIPGPS*PAWLLAAAGLLPPH
Trigger: ATGAGGAGGAAGCAGCCCAGCAGCAGCTAGTAGCCAAGCTGGCCATGAAGGGCCAGGTATCCCTGAAGACAGCACTGGAGACACCAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp TGTGTACGTCTTGCCGGTGCCAAAGGGGCCATAGATGAGCAGTGGTaGGATGTGCTTTGTGCCCTCGGGTCTTCTGCCTGCAATGAGCCC +
Preference number: 5 (lower is better)
Translates to: CVRLAGAKGAIDEQW*DVLCALGSSACNEP
Trigger: GGGCTCATTGCAGGCAGAAGACCCGAGGGCACAAAGCACATCCCACCACTGCTCATCTATGGCCCCTTTGGCACCGGCAAGACGTACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp GCACTGTTGGTGTGTGTGCAGATGAGCACCTTGGTGTGGGGCTGCTaGACAACCTCAAGTGCGGCCATGGCCAATGTGTACGTCTTGCCG +
Preference number: 5 (lower is better)
Translates to: ALLVCVQMSTLVWGC*TTSSAAMANVYVLP
Trigger: CGGCAAGACGTACACATTGGCCATGGCCGCACTTGAGGTTGTCCAGCAGCCCCACACCAAGGTGCTCATCTGCACACACACCAACAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp ACAATGTGGAAGCCCACAACGGTCTTCCCAGTGCCTGGTGGGCCCTaGATGACTGTGAACTGTTTCTGCAGAGCGCTCCTGACAGCCCTG +
Preference number: 5 (lower is better)
Translates to: TMWKPTTVFPVPGGP*MTVNCFCRALLTAL
Trigger: CAGGGCTGTCAGGAGCGCTCTGCAGAAACAGTTCACAGTCATCCAGGGCCCACCAGGCACTGGGAAGACCGTTGTGGGCTTCCACATTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
CDS-3UTR CAA 90 bp CCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACAGGCCAGCTGTTTGCGGTGGATGGGAACTaGCTGTGGGTCCTTCATCTC +
Preference number: 5 (lower is better)
Translates to: PRSAGYLIPSCLPTGQLFAVDGN*LWVLHL
Trigger: GAGATGAAGGACCCACAGCAAGTTCCCATCCACCGC...AAACAGCTGGCCTGTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp CATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCGGGAATGGTAGTGAATaGGGCAGGGATCGGGCAGCG +
Preference number: 5 (lower is better)
Translates to: HGEEQAQKCWVPYSQLPAGNGSE*GRDRAA
Trigger: CGCTGCCCGATCCCTGCCCAATTCACTACCATTCCC...GGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp CATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCTCCACAGCTTCAGGGTaGGTGCCAGGAAACCCCGCT +
Preference number: 5 (lower is better)
Translates to: HGEEQAQKCWVPYSQLPASTASG*VPGNPA
Trigger: AGCGGGGTTTCCTGGCACCAACCCTGAAGCTGTGGA...GGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp CCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACAGGCCAGCTGTTTGCCCTAGAGTTCTCATaGCCATCCTCGGTGGACACC +
Preference number: 5 (lower is better)
Translates to: PRSAGYLIPSCLPTGQLFALEFS*PSSVDT
Trigger: GGTGTCCACCGAGGATGGCAATGAGAACTCTAGGGC...AAACAGCTGGCCTGTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp TGGGGCAGGTGTGCTCTACCTCACGCAGAATGTAGGTACTCTCATTaGGGCACTGGGTGCAGCGGGAGCAGCCCAGGTAAAGGTCTACCT +
Preference number: 5 (lower is better)
Translates to: WGRCALPHAECRYSH*GTGCSGSSPGKGLP
Trigger: AGGTAGACCTTTACCTGGGCTGCTCCCGCTGCACCCAGTGCCTCAATGAGAGTACCTACATTCTGCGTGAGGTAGAGCACACCTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp TCATGGACATGTCCTGCTCAGGGCTTCCTGCCACATGGCAGAACATaGGAGGGTAGTGTTGGGGGTGACGTGGGACTTTGCCACTGGCCT +
Preference number: 5 (lower is better)
Translates to: SWTCPAQGFLPHGRT*EGSVGGDVGLCHWP
Trigger: AGGCCAGTGGCAAAGTCCCACGTCACCCCCAACACTACCCTCTCATGTTCTGCCATGTGGCAGGAAGCCCTGAGCAGGACATGTCCATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp ACAGCTCCTCAGGGAAGGCGCTGTGGTGTTCTATGCACTCGCGGATaGAGCTTCTCCAGAGATTTCTGCAGGCTCCAGAGGAGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: TAPQGRRCGVLCTRG*SFSRDFCRLQRSRG
Trigger: CCCTCTGCTCCTCTGGAGCCTGCAGAAATCTCTGGAGAAGCTTCATCCGCGAGTGCATAGAACACCACAGCGCCTTCCCTGAGGAGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp TTGAAAAGCAGTCACCTGGCCGTTCCATGTGCTCCAGACAGAGGCTaGAGCCAGGGACCACAGTCCACAGCTTCAGGGTTGGTGCCAGGA +
Preference number: 5 (lower is better)
Translates to: LKSSHLAVPCAPDRG*SQGPQSTASGLVPG
Trigger: TCCTGGCACCAACCCTGAAGCTGTGGACTGTGGTCCCTGGCTTCAGCCTCTGTCTGGAGCACATGGAACGGCCAGGTGACTGCTTTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp GGTGCTGGCTTCCCATTTAGGCCCTGGCTGTGTGTCTGGCCTAGCTaGAACTTCAGCTTCTGGAGAAGCACTGGCCTGCGACCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: GAGFPFRPWLCVWPS*NFSFWRSTGLRPKS
Trigger: TGACTTTGGTCGCAGGCCAGTGCTTCTCCAGAAGCTGAAGTTGCAGCTAGGCCAGACACACAGCCAGGGCCTAAATGGGAAGCCAGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp AGGCAGGTCAGGAACCACCAGGTGCTCCTCGAGCAGTGCATCCACTaGCTGATGCCAGAACCGGAAGGTCATAGGGTCAATCTGGAACTG +
Preference number: 5 (lower is better)
Translates to: RQVRNHQVLLEQCIH*LMPEPEGHRVNLEL
Trigger: CAGTTCCAGATTGACCCTATGACCTTCCGGTTCTGGCATCAGGCAGTGGATGCACTGCTCGAGGAGCACCTGGTGGTTCCTGACCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp GCAGCACTGTTGGTGTGTGTGCAGATGAGCACCTTGGTGTGGGGCTaGTGGACAACCTCAAGTGCGGCCATGGCCAATGTGTACGTCTTG +
Preference number: 5 (lower is better)
Translates to: AALLVCVQMSTLVWG*WTTSSAAMANVYVL
Trigger: CAAGACGTACACATTGGCCATGGCCGCACTTGAGGTTGTCCAGCAGCCCCACACCAAGGTGCTCATCTGCACACACACCAACAGTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp GTGGGTGGGCGAAAGGCCTGGCGGTCCTCAGTTAGGCAGCAGTACTaGAACGTGGTTGGATCAGTCTGTCTTGGAGGACGATCTGCATAC +
Preference number: 5 (lower is better)
Translates to: VGGRKAWRSSVRQQY*NVVGSVCLGGRSAY
Trigger: GTATGCAGATCGTCCTCCAAGACAGACTGATCCAACCACGTTGCAGTACTGCTGCCTAACTGAGGACCGCCAGGCCTTTCGCCCACCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp TCAGTACCACCACCCGGAACTCACGCCCTGGCAGGATCTCAAAGCTaGCCACAGACACCTCACCAAGGTTCCTCCTTCTTAGCTCCTGTC +
Preference number: 5 (lower is better)
Translates to: SVPPPGTHALAGSQS*PQTPHQGSSFLAPV
Trigger: GACAGGAGCTAAGAAGGAGGAACCTTGGTGAGGTGTCTGTGGGCAGCTTTGAGATCCTGCCAGGGCGTGAGTTCCGGGTGGTGGTACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp AGCAGGGATGTTGTAGTTCTGCCGCTCCAAGAACCTGCTGGTAGATaGCTTGTGAAAAGAATGCTGGCGAGGCCAGTTGCCGCGGCAGGG +
Preference number: 5 (lower is better)
Translates to: SRDVVVLPLQEPAGR*LVKRMLARPVAAAG
Trigger: CCCTGCCGCGGCAACTGGCCTCGCCAGCATTCTTTTCACAAGGCATCTACCAGCAGGTTCTTGGAGCGGCAGAACTACAACATCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
CDS CCA 90 bp TCTGGGCCCCTAGCTTTGAGTGTCAATGAGGCCCAGTTCTGTCTCTaGGCCACACCCTGCTCAATCTGTTCCAGTGACAGCTCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: SGPLALSVNEAQFCL*ATPCSICSSDSSSG
Trigger: CCCTGAGGAGCTGTCACTGGAACAGATTGAGCAGGGTGTGGCCCAGAGACAGAACTGGGCCTCATTGACACTCAAAGCTAGGGGCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp TGCCAAACAGACTCCTGTTGCTCACTCCTGGCAGCGGGAATTCAGTaGCCTCTGCCTGCTCCCCATATACACGCAGGGGCTTCATCTCTG +
Preference number: 5 (lower is better)
Translates to: CQTDSCCSLLAAGIQ*PLPAPHIHAGASSL
Trigger: CAGAGATGAAGCCCCTGCGTGTATATGGGGAGCAGGCAGAGGCCACTGAATTCCCGCTGCCAGGAGTGAGCAACAGGAGTCTGTTTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp ATGATGCACAACGCCTCCTGGGCCCGGGTGATGGCCACGTTTACTTaGTGGGGGTCCACAACAAAGCCCAGAAACTTCTTGAGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: MMHNASWARVMATFT*WGSTTKPRNFLSQL
Trigger: GAGCTGGCTCAAGAAGTTTCTGGGCTTTGTTGTGGACCCCCACCAAGTAAACGTGGCCATCACCCGGGCCCAGGAGGCGTTGTGCATCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp CAGGCCAGCTGTTTTACATTCCAGGAGGTAGGGCTGTGTGAGCATTTGGTTCAGAGAGCGTCGTCAAGGTaGCAGGCACCCTGGGGGTCC +
Preference number: 5 (lower is better)
Translates to: QASCFTFQEVGLCEHLVQRASSR*QAPWGS
Trigger: GGACCCCCAGGGTGCCTGCAACCTTGACGACGCTCT...CTGAACCAAATGCTCACACAGCCCTACCTCCTGGAATGTAAAACAGCTGGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp TCCTGCCAGGCGGCCTGTTCTCGCAGTTCCATGTCTTGTGCCCGCTaGACCCACTCCTGTAACTCCTGTTTTGAGTGTGCCTTGATGCAG +
Preference number: 5 (lower is better)
Translates to: SCQAACSRSSMSCAR*THSCNSCFECALMQ
Trigger: CTGCATCAAGGCACACTCAAAACAGGAGTTACAGGAGTGGGTTCAGCGGGCACAAGACATGGAACTGCGAGAACAGGCCGCCTGGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp GCTGGATCTTCTCCTGGGCCTGATGCACCGGTGGTGGGTGGCAAGTaGCAGACACTCCACGGATGGTCTCAGCCATCACTGATACTTCTT +
Preference number: 5 (lower is better)
Translates to: AGSSPGPDAPVVGGK*QTLHGWSQPSLILL
Trigger: AAGAAGTATCAGTGATGGCTGAGACCATCCGTGGAGTGTCTGTCACTTGCCACCCACCACCGGTGCATCAGGCCCAGGAGAAGATCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp GGTAGTTCGAACGAGAGATGGGCCCCCAGTCCGGAACAATCTGATTaGACTCCAGGGCCAGGGAGGGTAACTTGTACTTGGCCATCAGGG +
Preference number: 5 (lower is better)
Translates to: GSSNERWAPSPEQSD*TPGPGRVTCTWPSG
Trigger: CCCTGATGGCCAAGTACAAGTTACCCTCCCTGGCCCTGGAGTTCAATCAGATTGTTCCGGACTGGGGGCCCATCTCTCGTTCGAACTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp GCAGTGGTGGGATGTGCTTTGTGCCCTCGGGTCTTCTGCCTGCAATaGGCCCCACAGCCAGCTTCTGTTTGTGATTGCCACGAAATGAGG +
Preference number: 5 (lower is better)
Translates to: AVVGCALCPRVFCLQ*APQPASVCDCHEMR
Trigger: CCTCATTTCGTGGCAATCACAAACAGAAGCTGGCTGTGGGGCTCATTGCAGGCAGAAGACCCGAGGGCACAAAGCACATCCCACCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp ACTCCCGGATATAGATGTCTGCAGCACTGTTGGTGTGTGTGCAGATaGGCACCTTGGTGTGGGGCTGCTGGACAACCTCAAGTGCGGCCA +
Preference number: 5 (lower is better)
Translates to: TPGYRCLQHCWCVCR*APWCGAAGQPQVRP
Trigger: TGGCCGCACTTGAGGTTGTCCAGCAGCCCCACACCAAGGTGCTCATCTGCACACACACCAACAGTGCTGCAGACATCTATATCCGGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp GCCGACTTGAAGGTACTGGTCTTGCAGAGCCTGGTGCACATGGCTTaGAAAGCAGTCACCTGGCCGTTCCATGTGCTCCAGACAGAGGCT +
Preference number: 5 (lower is better)
Translates to: ADLKVLVLQSLVHMA*KAVTWPFHVLQTEA
Trigger: AGCCTCTGTCTGGAGCACATGGAACGGCCAGGTGACTGCTTTTCAAGCCATGTGCACCAGGCTCTGCAAGACCAGTACCTTCAAGTCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp CCACGTTTACTTGGTGGGGGTCCACAACAAAGCCCAGAAACTTCTTaGGCCAGCTCTTTGTTGGCCGCTGGTCCACATCACTCCTGGGGC +
Preference number: 5 (lower is better)
Translates to: PRLLGGGPQQSPETS*ASSLLAAGPHHSWG
Trigger: GCCCCAGGAGTGATGTGGACCAGCGGCCAACAAAGAGCTGGCTCAAGAAGTTTCTGGGCTTTGTTGTGGACCCCCACCAAGTAAACGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp GCTCAAATGTCCAGACCAGTGCCTCCTCAGGGCTTCGGGCAAAGGTaGATCTATTCCAGTGACGCCTACAGCCCAACCCTGGCCTATAGT +
Preference number: 5 (lower is better)
Translates to: AQMSRPVPPQGFGQR*IYSSDAYSPTLAYS
Trigger: ACTATAGGCCAGGGTTGGGCTGTAGGCGTCACTGGAATAGATGCACCTTTGCCCGAAGCCCTGAGGAGGCACTGGTCTGGACATTTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp GGCATAGGAGAGTGGGATAAGGGCCTCACACTCCAGCATTTGGGCTaGCTCATCGATGAAAATGTGGGAGAAGAAGCCCGCTGGCACCTG +
Preference number: 5 (lower is better)
Translates to: GIGEWDKGLTLQHLG*LIDENVGEEARWHL
Trigger: CAGGTGCCAGCGGGCTTCTTCTCCCACATTTTCATCGATGAGGCAGCCCAAATGCTGGAGTGTGAGGCCCTTATCCCACTCTCCTATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp CGAGTTAAGCCAGGATGTCATGGACATGTCCTGCTCAGGGCTTCCTaGCACATGGCAGAACATGAGAGGGTAGTGTTGGGGGTGACGTGG +
Preference number: 5 (lower is better)
Translates to: RVKPGCHGHVLLRAS*HMAEHERVVLGVTW
Trigger: CCACGTCACCCCCAACACTACCCTCTCATGTTCTGCCATGTGGCAGGAAGCCCTGAGCAGGACATGTCCATGACATCCTGGCTTAACTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp GGCTTCCTCATACGACAGCTGGCGGTCAGAGCGGATTATGGAGGGTaGAAATCGCAGGCTCTTGATCTGGCCACCACCTTTCTCCATGGT +
Preference number: 5 (lower is better)
Translates to: GFLIRQLAVRADYGG*KSQALDLATTFLHG
Trigger: ACCATGGAGAAAGGTGGTGGCCAGATCAAGAGCCTGCGATTTGCACCCTCCATAATCCGCTCTGACCGCCAGCTGTCGTATGAGGAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp GAATATGTAGAGCCCCTGTGGCCCAATGCCAGCAGGATCAGCCGCTaGAGCACCACATCTAGATACCTACGGATGGGTGAGGTTGCCCAT +
Preference number: 5 (lower is better)
Translates to: EYVEPLWPNASRISR*STTSRYLRMGEVAH
Trigger: ATGGGCAACCTCACCCATCCGTAGGTATCTAGATGTGGTGCTGCAGCGGCTGATCCTGCTGGCATTGGGCCACAGGGGCTCTACATATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp CGCTTATCTTGCTCCTGGATGAGGGCAGCTATCTCAGGCCAGCGCTaGTCCTTCAGCAGCATCAGTAGCTTCATCCACAGGGCTGCATCT +
Preference number: 5 (lower is better)
Translates to: RLSCSWMRAAISGQR*SFSSISSFIHRAAS
Trigger: AGATGCAGCCCTGTGGATGAAGCTACTGATGCTGCTGAAGGAGCAGCGCTGGCCTGAGATAGCTGCCCTCATCCAGGAGCAAGATAAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp CAACCCTGGCCTATAGTAGTGACAGACTTGATAGCGCATAGGCGTTaGGAAGCTAGGCCTGCGGCCCACCTTACGCCAGATCTTGCTCTC +
Preference number: 5 (lower is better)
Translates to: QPWPIVVTDLIAHRR*EARPAAHLTPDLAL
Trigger: GAGAGCAAGATCTGGCGTAAGGTGGGCCGCAGGCCTAGCTTCCCAACGCCTATGCGCTATCAAGTCTGTCACTACTATAGGCCAGGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp TTTAGGCCCTGGCTGTGTGTCTGGCCTAGCTGCAACTTCAGCTTCTaGAGAAGCACTGGCCTGCGACCAAAGTCAAAGACCACCCACTGC +
Preference number: 5 (lower is better)
Translates to: FRPWLCVWPSCNFSF*RSTGLRPKSKTTHC
Trigger: GCAGTGGGTGGTCTTTGACTTTGGTCGCAGGCCAGTGCTTCTCCAGAAGCTGAAGTTGCAGCTAGGCCAGACACACAGCCAGGGCCTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp GTCATAGGGTCAATCTGGAACTGCACCTCCAAGATGGGGCTGTCTTaGGCCTGCAGCCCCAAAGCCATACAGCATCGTGCTGGTAACAGC +
Preference number: 5 (lower is better)
Translates to: VIGSIWNCTSKMGLS*ACSPKAIQHRAGNS
Trigger: GCTGTTACCAGCACGATGCTGTATGGCTTTGGGGCTGCAGGCCCAAGACAGCCCCATCTTGGAGGTGCAGTTCCAGATTGACCCTATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp CAATGTGTACGTCTTGCCGGTGCCAAAGGGGCCATAGATGAGCAGTaGTGGGATGTGCTTTGTGCCCTCGGGTCTTCTGCCTGCAATGAG +
Preference number: 5 (lower is better)
Translates to: QCVRLAGAKGAIDEQ*WDVLCALGSSACNE
Trigger: CTCATTGCAGGCAGAAGACCCGAGGGCACAAAGCACATCCCACCACTGCTCATCTATGGCCCCTTTGGCACCGGCAAGACGTACACATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp GGCGAAAGGCCTGGCGGTCCTCAGTTAGGCAGCAGTACTGCAACGTaGTTGGATCAGTCTGTCTTGGAGGACGATCTGCATACATCACCC +
Preference number: 5 (lower is better)
Translates to: GERPGGPQLGSSTAT*LDQSVLEDDLHTSP
Trigger: GGGTGATGTATGCAGATCGTCCTCCAAGACAGACTGATCCAACCACGTTGCAGTACTGCTGCCTAACTGAGGACCGCCAGGCCTTTCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp CGGTCAGAGCGGATTATGGAGGGTGCAAATCGCAGGCTCTTGATCTaGCCACCACCTTTCTCCATGGTGAGGAAGAGAGAGATGGCGAGG +
Preference number: 5 (lower is better)
Translates to: RSERIMEGANRRLLI*PPPFSMVRKREMAR
Trigger: CCTCGCCATCTCTCTCTTCCTCACCATGGAGAAAGGTGGTGGCCAGATCAAGAGCCTGCGATTTGCACCCTCCATAATCCGCTCTGACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp CCAGCAGGATCAGCCGCTGCAGCACCACATCTAGATACCTACGGATaGGTGAGGTTGCCCATGTGTACCAATCCACCTGTAGCGAGTGGT +
Preference number: 5 (lower is better)
Translates to: PAGSAAAAPHLDTYG*VRLPMCTNPPVASG
Trigger: ACCACTCGCTACAGGTGGATTGGTACACATGGGCAACCTCACCCATCCGTAGGTATCTAGATGTGGTGCTGCAGCGGCTGATCCTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp CGATCATCCACATTCTCCTGGTCCCAGTCACCACCAGCCAGTTCATaGTCCCAGTCACCAGACAGCCCATGGGCCACCCAGGTATATGTA +
Preference number: 5 (lower is better)
Translates to: RSSTFSWSQSPPASS*SQSPDSPWATQVYV
Trigger: TACATATACCTGGGTGGCCCATGGGCTGTCTGGTGACTGGGACCATGAACTGGCTGGTGGTGACTGGGACCAGGAGAATGTGGATGATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp GAACCAGTACACAATGTGGAAGCCCACAACGGTCTTCCCAGTGCCTaGTGGGCCCTGGATGACTGTGAACTGTTTCTGCAGAGCGCTCCT +
Preference number: 5 (lower is better)
Translates to: EPVHNVEAHNGLPSA*WALDDCELFLQSAP
Trigger: AGGAGCGCTCTGCAGAAACAGTTCACAGTCATCCAGGGCCCACCAGGCACTGGGAAGACCGTTGTGGGCTTCCACATTGTGTACTGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
CDS CCA 90 bp CCACTCGGGCTGCTGTCAGTTGGCATCTGCTCCTGGTTTGACCTGTaGAACCAGTACACAATGTGGAAGCCCACAACGGTCTTCCCAGTG +
Preference number: 5 (lower is better)
Translates to: PLGLLSVGICSWFDL*NQYTMWKPTTVFPV
Trigger: CACTGGGAAGACCGTTGTGGGCTTCCACATTGTGTACTGGTTCCACAGGTCAAACCAGGAGCAGATGCCAACTGACAGCAGCCCGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp TCCTTCCTGAGAGGTCTTGCCAAACAGACTCCTGTTGCTCACTCCTaGCAGCGGGAATTCAGTGGCCTCTGCCTGCTCCCCATATACACG +
Preference number: 5 (lower is better)
Translates to: SFLRGLAKQTPVAHS*QREFSGLCLLPIYT
Trigger: CGTGTATATGGGGAGCAGGCAGAGGCCACTGAATTCCCGCTGCCAGGAGTGAGCAACAGGAGTCTGTTTGGCAAGACCTCTCAGGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp ATGCACAACGCCTCCTGGGCCCGGGTGATGGCCACGTTTACTTGGTaGGGGTCCACAACAAAGCCCAGAAACTTCTTGAGCCAGCTCTTT +
Preference number: 5 (lower is better)
Translates to: MHNASWARVMATFTW*GSTTKPRNFLSQLF
Trigger: AAAGAGCTGGCTCAAGAAGTTTCTGGGCTTTGTTGTGGACCCCCACCAAGTAAACGTGGCCATCACCCGGGCCCAGGAGGCGTTGTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp GGACATAGGTATGGAAGCATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTAGCACCACGTGGCGGTaGCCTGTGTGCCAGCATTCC +
Preference number: 5 (lower is better)
Translates to: GHRYGSMVKNRPRSAGYLSTTWR*PVCQHS
Trigger: GGAATGCTGGCACACAGGCAACCGCCACGTGGTGCT...AAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATGCTTCCATACCTATGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp AGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTGCCAGGGAGGGTAACTaGTACTTGGCCATCAGGGCT +
Preference number: 5 (lower is better)
Translates to: SWEKGADLQLFPLHSSPSAREGN*YLAIRA
Trigger: AGCCCTGATGGCCAAGTACAAGTTACCCTCCCTGGC...ACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp CCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACAGGCCAGCTGTTTATGTCTGCAGCACTGTaGGTGTGTGTGCAGATGAGC +
Preference number: 5 (lower is better)
Translates to: PRSAGYLIPSCLPTGQLFMSAAL*VCVQMS
Trigger: GCTCATCTGCACACACACCAACAGTGCTGCAGACAT...AAACAGCTGGCCTGTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp AGGAGGTTCTGCAGCCAGGCCTTAGAAGCCCCAGATGTCCTGGTGTATATTTCAACGCTGCACCTGGCCTaGAATGAGGCGGTGGATGGG +
Preference number: 5 (lower is better)
Translates to: RRFCSQALEAPDVLVYISTLHLA*NEAVDG
Trigger: CCCATCCACCGCCTCATTCAAGGCCAGGTGCAGCGT...TGAAATATACACCAGGACATCTGGGGCTTCTAAGGCCTGGCTGCAGAACCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp CAGGCCAGCTGTTTTACATTCCAGGAGGTAGGGCTGTGTGAGCATTTGGTTCAGACGCTGCACCTGGCCTaGAATGAGGCGGTGGATGGG +
Preference number: 5 (lower is better)
Translates to: QASCFTFQEVGLCEHLVQTLHLA*NEAVDG
Trigger: CCCATCCACCGCCTCATTCAAGGCCAGGTGCAGCGT...CTGAACCAAATGCTCACACAGCCCTACCTCCTGGAATGTAAAACAGCTGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp CTGGGGTCCTCTGTGACCACTAAGAGGTGTCCCAGTCATCAAATGCCCCAGAAATCCACAGCTTCAGGGTaGGTGCCAGGAAACCCCGCT +
Preference number: 5 (lower is better)
Translates to: LGSSVTTKRCPSHQMPQKSTASG*VPGNPA
Trigger: AGCGGGGTTTCCTGGCACCAACCCTGAAGCTGTGGA...TTTCTGGGGCATTTGATGACTGGGACACCTCTTAGTGGTCACAGAGGACCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp AGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTCCTGGTGCACATGGCTaGAAAAGCAGTCACCTGGCC +
Preference number: 5 (lower is better)
Translates to: SWEKGADLQLFPLHSSPSPGAHG*KSSHLA
Trigger: GGCCAGGTGACTGCTTTTCAAGCCATGTGCACCAGG...ACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp CCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACAGGCCAGCTGTTTTTGAAGGTACTGGTCTaGCAGAGCCTGGTGCACATG +
Preference number: 5 (lower is better)
Translates to: PRSAGYLIPSCLPTGQLFLKVLV*QSLVHM
Trigger: CATGTGCACCAGGCTCTGCAAGACCAGTACCTTCAA...AAACAGCTGGCCTGTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp AGCCCCAGATGTCCTGGTGTATATTTCACTTGCAGCAACTCTGACCTCGGCGGGTCGGGCTGCTGTCAGTaGGCATCTGCTCCTGGTTTG +
Preference number: 5 (lower is better)
Translates to: SPRCPGVYFTCSNSDLGGSGCCQ*ASAPGL
Trigger: CAAACCAGGAGCAGATGCCAACTGACAGCAGCCCGA...CCCGCCGAGGTCAGAGTTGCTGCAAGTGAAATATACACCAGGACATCTGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp TCAGGCCATGCTCTAGGTCAAGGATATAAAGGCCCTGCTCCCAGGTaGTGGCCTTGGGCAGCACCTCCAGGACAATGCCTAGTGGATAGT +
Preference number: 5 (lower is better)
Translates to: SGHALGQGYKGPAPR*WPWAAPPGQCLVDS
Trigger: ACTATCCACTAGGCATTGTCCTGGAGGTGCTGCCCAAGGCCATCACCTGGGAGCAGGGCCTTTATATCCTTGACCTAGAGCATGGCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp CTCCTCTCCACTCGGGCTGCTGTCAGTTGGCATCTGCTCCTGGTTTaGCCTGTGGAACCAGTACACAATGTGGAAGCCCACAACGGTCTT +
Preference number: 5 (lower is better)
Translates to: LLSTRAAVSWHLLLV*PVEPVHNVEAHNGL
Trigger: AAGACCGTTGTGGGCTTCCACATTGTGTACTGGTTCCACAGGTCAAACCAGGAGCAGATGCCAACTGACAGCAGCCCGAGTGGAGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp GAATTTTCAGGCTCTTTGATGCCGCACAGGAGCACGTGCACAGGATaGCCGAGTGCCGCTCCAGTTCATGTTTGCGTGCCTTCCCCAAGA +
Preference number: 5 (lower is better)
Translates to: EFSGSLMPHRSTCTG*PSAAPVHVCVPSPR
Trigger: TCTTGGGGAAGGCACGCAAACATGAACTGGAGCGGCACTCGGTCATCCTGTGCACGTGCTCCTGTGCGGCATCAAAGAGCCTGAAAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp CAAAGAGAGACCGATCCATCCCCAGACTCTGCAGCTGTTCACTCTTaGCCACAGGCCGAAGCTGCTTGTGGTCTCCAAGCAGAACCACCT +
Preference number: 5 (lower is better)
Translates to: QRETDPSPDSAAVHS*PQAEAACGLQAEPP
Trigger: AGGTGGTTCTGCTTGGAGACCACAAGCAGCTTCGGCCTGTGGTCAAGAGTGAACAGCTGCAGAGTCTGGGGATGGATCGGTCTCTCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp AAGTCAAAGACCACCCACTGCTCAAAGCTGCCGAAGGCGACAGCCTaGACAAGCACCCCTACCTTGTATTGGGCTGGGGAGCTTTGTACA +
Preference number: 5 (lower is better)
Translates to: KSKTTHCSKLPKATA*TSTPTLYWAGELCT
Trigger: TGTACAAAGCTCCCCAGCCCAATACAAGGTAGGGGTGCTTGTGCAGGCTGTCGCCTTCGGCAGCTTTGAGCAGTGGGTGGTCTTTGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp GATGAGCAGTGGTGGGATGTGCTTTGTGCCCTCGGGTCTTCTGCCTaGAATGAGCCCCACAGCCAGCTTCTGTTTGTGATTGCCACGAAA +
Preference number: 5 (lower is better)
Translates to: DEQWWDVLCALGSSA*NEPHSQLLFVIATK
Trigger: TTTCGTGGCAATCACAAACAGAAGCTGGCTGTGGGGCTCATTGCAGGCAGAAGACCCGAGGGCACAAAGCACATCCCACCACTGCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp GCAGTACTGCAACGTGGTTGGATCAGTCTGTCTTGGAGGACGATCTaGATACATCACCCTGAGTGGAGTGGCCTCTGGATGGCCACTGCT +
Preference number: 5 (lower is better)
Translates to: AVLQRGWISLSWRTI*IHHPEWSGLWMATA
Trigger: AGCAGTGGCCATCCAGAGGCCACTCCACTCAGGGTGATGTATGCAGATCGTCCTCCAAGACAGACTGATCCAACCACGTTGCAGTACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp GTAGTTCTCATGGAAGATGATGCGACTCTGCTGAGCGATCTTGTGTaGCTCCTGCTGGTAGTACAGGAAGAGGCGGTGCAGCAGCGTGTG +
Preference number: 5 (lower is better)
Translates to: VVLMEDDATLLSDLV*LLLVVQEEAVQQRV
Trigger: CACACGCTGCTGCACCGCCTCTTCCTGTACTACCAGCAGGAGGCACACAAGATCGCTCAGCAGAGTCGCATCATCTTCCATGAGAACTAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp ACCACGGTGTCCAGAAGTCCGTCCTCCCTAACAGTCACAGTCACTTaGTGGCTCTCGTCGAGAAGTTCCTTCAGGATGGCGTCATCAGCA +
Preference number: 5 (lower is better)
Translates to: TTVSRSPSSLTVTVT*WLSSRSSFRMASSA
Trigger: TGCTGATGACGCCATCCTGAAGGAACTTCTCGACGAGAGCCAGCAAGTGACTGTGACTGTTAGGGAGGACGGACTTCTGGACACCGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp TCCCTGTGGTACCTCTCAAAGAGAGACCGATCCATCCCCAGACTCTaGAGCTGTTCACTCTTGACCACAGGCCGAAGCTGCTTGTGGTCT +
Preference number: 5 (lower is better)
Translates to: SLWYLSKRDRSIPRL*SCSLLTTGRSCLWS
Trigger: AGACCACAAGCAGCTTCGGCCTGTGGTCAAGAGTGAACAGCTGCAGAGTCTGGGGATGGATCGGTCTCTCTTTGAGAGGTACCACAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp CCAGGGTGTCTCTTGATCAGTTCTTCGGCTTCCTCATACGACAGCTaGCGGTCAGAGCGGATTATGGAGGGTGCAAATCGCAGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: PGCLLISSSASSYDS*RSERIMEGANRRLL
Trigger: CAAGAGCCTGCGATTTGCACCCTCCATAATCCGCTCTGACCGCCAGCTGTCGTATGAGGAAGCCGAAGAACTGATCAAGAGACACCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp AGGCAGAGCCCATCAATGTCCCTGTTAGAATATGTAGAGCCCCTGTaGCCCAATGCCAGCAGGATCAGCCGCTGCAGCACCACATCTAGA +
Preference number: 5 (lower is better)
Translates to: RQSPSMSLLEYVEPL*PNASRISRCSTTSR
Trigger: TCTAGATGTGGTGCTGCAGCGGCTGATCCTGCTGGCATTGGGCCACAGGGGCTCTACATATTCTAACAGGGACATTGATGGGCTCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp TGGAGAAAAGCAGCTTCCAGCTGGAAGGTGCCCTGCAACTGCCCCTaGGATGTGTCCCAAGAGATATGCACATCGTGCAGCACAATGGAG +
Preference number: 5 (lower is better)
Translates to: WRKAASSWKVPCNCP*DVSQEICTSCSTME
Trigger: CTCCATTGTGCTGCACGATGTGCATATCTCTTGGGACACATCCCAGGGGCAGTTGCAGGGCACCTTCCAGCTGGAAGCTGCTTTTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp CAGGGTCAACTGCTTTATGATGCGGACCACCTGTGTGACTTCCTCTaGGTTGGCCCTAGAGTTCTCATTGCCATCCTCGGTGGACACCAG +
Preference number: 5 (lower is better)
Translates to: QGQLLYDADHLCDFL*VGPRVLIAILGGHQ
Trigger: CTGGTGTCCACCGAGGATGGCAATGAGAACTCTAGGGCCAACCCAGAGGAAGTCACACAGGTGGTCCGCATCATAAAGCAGTTGACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp CCCAGAAAAGCAAAGGGAGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCGGGCTGGCTTTCCATTaGTTTTCCCCAAAGAGAGGA +
Preference number: 5 (lower is better)
Translates to: PRKAKGVGRKGPTSSSFPGLAFH*FSPKRG
Trigger: TCCTCTCTTTGGGGAAAACAAATGGAAAGCCAGCCC...GGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACTCCCTTTGCTTTTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp AGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAACTTGGAGAGTCCCATaGGTGGGGCACGGTGTTTCC +
Preference number: 5 (lower is better)
Translates to: RGRPPALSPPFKSKYKQETWRVP*VGHGVS
Trigger: GGAAACACCGTGCCCCACCAATGGGACTCTCCAAGT...TTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp AGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGCCAGGGAGGGTAACTaGTACTTGGCCATCAGGGCT +
Preference number: 5 (lower is better)
Translates to: RGRPPALSPPFKSKYKQEAREGN*YLAIRA
Trigger: AGCCCTGATGGCCAAGTACAAGTTACCCTCCCTGGC...TTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp CATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCATGTCTGCAGCACTGTaGGTGTGTGTGCAGATGAGC +
Preference number: 5 (lower is better)
Translates to: HGEEQAQKCWVPYSQLPAMSAAL*VCVQMS
Trigger: GCTCATCTGCACACACACCAACAGTGCTGCAGACAT...GGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp AGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAATCGGGCTGCTGTCAGTaGGCATCTGCTCCTGGTTTG +
Preference number: 5 (lower is better)
Translates to: RGRPPALSPPFKSKYKQESGCCQ*ASAPGL
Trigger: CAAACCAGGAGCAGATGCCAACTGACAGCAGCCCGA...TTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp AGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGCCCTAGAGTTCTCATaGCCATCCTCGGTGGACACC +
Preference number: 5 (lower is better)
Translates to: RGRPPALSPPFKSKYKQEALEFS*PSSVDT
Trigger: GGTGTCCACCGAGGATGGCAATGAGAACTCTAGGGC...TTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp TGCCCTGCACAGCCTCTTTCAGTTTCAATCGGGGAAGGTTGTTCTTaGGCTCAAATGTCCAGACCAGTGCCTCCTCAGGGCTTCGGGCAA +
Preference number: 5 (lower is better)
Translates to: CPAQPLSVSIGEGCS*AQMSRPVPPQGFGQ
Trigger: TTGCCCGAAGCCCTGAGGAGGCACTGGTCTGGACATTTGAGCTCAAGAACAACCTTCCCCGATTGAAACTGAAAGAGGCTGTGCAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp GCTGGCTCTCGTCGAGAAGTTCCTTCAGGATGGCGTCATCAGCATTaGGCTCCCAGTCAGAGGGCCAGAAGTCAGACTCAGAATCTTCCT +
Preference number: 5 (lower is better)
Translates to: AGSRREVPSGWRHQH*APSQRARSQTQNLP
Trigger: AGGAAGATTCTGAGTCTGACTTCTGGCCCTCTGACTGGGAGCTCAATGCTGATGACGCCATCCTGAAGGAACTTCTCGACGAGAGCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp ATGGGTGAGGTTGCCCATGTGTACCAATCCACCTGTAGCGAGTGGTaGACAGCAGGTTGCTGCTTACCCTGGCTGGAGCGACCAAAAACA +
Preference number: 5 (lower is better)
Translates to: MGEVAHVYQSTCSEW*TAGCCLPWLERPKT
Trigger: TGTTTTTGGTCGCTCCAGCCAGGGTAAGCAGCAACCTGCTGTTCACCACTCGCTACAGGTGGATTGGTACACATGGGCAACCTCACCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp GCCCCTCCAGCCGAATGCAGAGGTAGCAACAGCCAAAGTGGATGTTaGTGCATTTCTCCTGGAGAAAAGCAGCTTCCAGCTGGAAGGTGC +
Preference number: 5 (lower is better)
Translates to: APPAECRGSNSQSGC*CISPGEKQLPAGRC
Trigger: GCACCTTCCAGCTGGAAGCTGCTTTTCTCCAGGAGAAATGCATCAACATCCACTTTGGCTGTTGCTACCTCTGCATTCGGCTGGAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp ATGCATTTCTCCTGGAGAAAAGCAGCTTCCAGCTGGAAGGTGCCCTaGAACTGCCCCTGGGATGTGTCCCAAGAGATATGCACATCGTGC +
Preference number: 5 (lower is better)
Translates to: MHFSWRKAASSWKVP*NCPWDVSQEICTSC
Trigger: GCACGATGTGCATATCTCTTGGGACACATCCCAGGGGCAGTTGCAGGGCACCTTCCAGCTGGAAGCTGCTTTTCTCCAGGAGAAATGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp ATCCCCAGACTCTGCAGCTGTTCACTCTTGACCACAGGCCGAAGCTaGTTGTGGTCTCCAAGCAGAACCACCTTCTCAACCGTCTTTGAG +
Preference number: 5 (lower is better)
Translates to: IPRLCSCSLLTTGRS*LWSPSRTTFSTVFE
Trigger: CTCAAAGACGGTTGAGAAGGTGGTTCTGCTTGGAGACCACAAGCAGCTTCGGCCTGTGGTCAAGAGTGAACAGCTGCAGAGTCTGGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp TCTCCAGTGCTGTCTTCAGGGATACCTGGCCCTTCATGGCCAGCTTaGCTACTAGCTGCTGCTGGGCTGCTTCCTCCTCATAGAGAAATT +
Preference number: 5 (lower is better)
Translates to: SPVLSSGIPGPSWPA*LLAAAGLLPPHREI
Trigger: AATTTCTCTATGAGGAGGAAGCAGCCCAGCAGCAGCTAGTAGCCAAGCTGGCCATGAAGGGCCAGGTATCCCTGAAGACAGCACTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp CCCTGCTCAATCTGTTCCAGTGACAGCTCCTCAGGGAAGGCGCTGTaGTGTTCTATGCACTCGCGGATGAAGCTTCTCCAGAGATTTCTG +
Preference number: 5 (lower is better)
Translates to: PCSICSSDSSSGKAL*CSMHSRMKLLQRFL
Trigger: CAGAAATCTCTGGAGAAGCTTCATCCGCGAGTGCATAGAACACCACAGCGCCTTCCCTGAGGAGCTGTCACTGGAACAGATTGAGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp ACGGTGTCCAGAAGTCCGTCCTCCCTAACAGTCACAGTCACTTGCTaGCTCTCGTCGAGAAGTTCCTTCAGGATGGCGTCATCAGCATTG +
Preference number: 5 (lower is better)
Translates to: TVSRSPSSLTVTVTC*LSSRSSFRMASSAL
Trigger: CAATGCTGATGACGCCATCCTGAAGGAACTTCTCGACGAGAGCCAGCAAGTGACTGTGACTGTTAGGGAGGACGGACTTCTGGACACCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp AACACTGTCAAGCTGCTGCCTACTGGGTGTGGGCTGCCACCTGAGTaGTGTGAGTGTCTGTGTGTGCTTGTTGCTCACAAGGAATTCAGC +
Preference number: 5 (lower is better)
Translates to: NTVKLLPTGCGLPPE*CECLCVLVAHKEFS
Trigger: GCTGAATTCCTTGTGAGCAACAAGCACACACAGACACTCACACCACTCAGGTGGCAGCCCACACCCAGTAGGCAGCAGCTTGACAGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp GGACATAGGTATGGAAGCATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTGCGGTGGATGGGAACTaGCTGTGGGTCCTTCATCTC +
Preference number: 5 (lower is better)
Translates to: GHRYGSMVKNRPRSAGYLAVDGN*LWVLHL
Trigger: GAGATGAAGGACCCACAGCAAGTTCCCATCCACCGC...AAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATGCTTCCATACCTATGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp CCTTTCCCAAGAAGACAGCAGAAGTGGTTGACTAATTTGAGCTGTGACTGTGACAGAGCGTCGTCAAGGTaGCAGGCACCCTGGGGGTCC +
Preference number: 5 (lower is better)
Translates to: PFPRRQQKWLTNLSCDCDRASSR*QAPWGS
Trigger: GGACCCCCAGGGTGCCTGCAACCTTGACGACGCTCT...GTCACAGTCACAGCTCAAATTAGTCAACCACTTCTGCTGTCTTCTTGGGAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp GGACCTTGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGTCCAGGGCCCCATCCTaGGGCACCAAGCTGGCCACA +
Preference number: 5 (lower is better)
Translates to: GPWHRRMRDIPSVDGTSKSRAPS*GTKLAT
Trigger: TGTGGCCAGCTTGGTGCCCAAGGATGGGGCCCTGGA...CTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCAAGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp GGACATAGGTATGGAAGCATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTGCCCCAGGGTGTCTCTaGATCAGTTCTTCGGCTTCC +
Preference number: 5 (lower is better)
Translates to: GHRYGSMVKNRPRSAGYLAPGCL*ISSSAS
Trigger: GGAAGCCGAAGAACTGATCAAGAGACACCCTGGGGC...AAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATGCTTCCATACCTATGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp ATCTGTGCGTGCTCCAGGGAGGAGCAGTGGTTCTCAAATGCCTCTTaGGAATTACAGGTGACCAGGCAGGCATGGCAGTACAGTTTGGTC +
Preference number: 5 (lower is better)
Translates to: ICACSREEQWFSNAS*ELQVTRQAWQYSLV
Trigger: GACCAAACTGTACTGCCATGCCTGCCTGGTCACCTGTAATTCTCAAGAGGCATTTGAGAACCACTGCTCCTCCCTGGAGCACGCACAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp GCGCTAGGTCTCAGCACCTCTTCTGGAACCTTCTCCATGGTCATGTaGTGGATGAGAAAATATACCTGCTTGGGCGCCTCCTGCCGATCA +
Preference number: 5 (lower is better)
Translates to: ALGLSTSSGTFSMVM*WMRKYTCLGASCRS
Trigger: TGATCGGCAGGAGGCGCCCAAGCAGGTATATTTTCTCATCCATCACATGACCATGGAGAAGGTTCCAGAAGAGGTGCTGAGACCTAGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp CTCGTCGATAAGGATCTGTCGAACATTCAGAATTTTCAGGCTCTTTaGTGCCGCACAGGAGCACGTGCACAGGATGACCGAGTGCCGCTC +
Preference number: 5 (lower is better)
Translates to: LVDKDLSNIQNFQAL*CRTGARAQDDRVPL
Trigger: GAGCGGCACTCGGTCATCCTGTGCACGTGCTCCTGTGCGGCATCAAAGAGCCTGAAAATTCTGAATGTTCGACAGATCCTTATCGACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp AAGCTGCTTGTGGTCTCCAAGCAGAACCACCTTCTCAACCGTCTTTaGGAAGCACACCAAGGGGATAAGGGTCTCTGGCTCAGTGGCCAT +
Preference number: 5 (lower is better)
Translates to: KLLVVSKQNHLLNRL*EAHQGDKGLWLSGH
Trigger: ATGGCCACTGAGCCAGAGACCCTTATCCCCTTGGTGTGCTTCTCAAAGACGGTTGAGAAGGTGGTTCTGCTTGGAGACCACAAGCAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp TCGGGCAAAGGTGCATCTATTCCAGTGACGCCTACAGCCCAACCCTaGCCTATAGTAGTGACAGACTTGATAGCGCATAGGCGTTGGGAA +
Preference number: 5 (lower is better)
Translates to: SGKGASIPVTPTAQP*PIVVTDLIAHRRWE
Trigger: TTCCCAACGCCTATGCGCTATCAAGTCTGTCACTACTATAGGCCAGGGTTGGGCTGTAGGCGTCACTGGAATAGATGCACCTTTGCCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp TCTTGGAGGACGATCTGCATACATCACCCTGAGTGGAGTGGCCTCTaGATGGCCACTGCTGACGTAGTCGTGGAAATACTCCCGGATATA +
Preference number: 5 (lower is better)
Translates to: SWRTICIHHPEWSGL*MATADVVVEILPDI
Trigger: TATATCCGGGAGTATTTCCACGACTACGTCAGCAGTGGCCATCCAGAGGCCACTCCACTCAGGGTGATGTATGCAGATCGTCCTCCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp AGACTCTGCAGCTGTTCACTCTTGACCACAGGCCGAAGCTGCTTGTaGTCTCCAAGCAGAACCACCTTCTCAACCGTCTTTGAGAAGCAC +
Preference number: 5 (lower is better)
Translates to: RLCSCSLLTTGRSCL*SPSRTTFSTVFEKH
Trigger: GTGCTTCTCAAAGACGGTTGAGAAGGTGGTTCTGCTTGGAGACCACAAGCAGCTTCGGCCTGTGGTCAAGAGTGAACAGCTGCAGAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp TCCTTATGCATACGGTACTGTGTGTCCAGCATGATGGCATCCCTGTaGTACCTCTCAAAGAGAGACCGATCCATCCCCAGACTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: SLCIRYCVSSMMASL*YLSKRDRSIPRLCS
Trigger: GCTGCAGAGTCTGGGGATGGATCGGTCTCTCTTTGAGAGGTACCACAGGGATGCCATCATGCTGGACACACAGTACCGTATGCATAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp ACAACAAAGCCCAGAAACTTCTTGAGCCAGCTCTTTGTTGGCCGCTaGTCCACATCACTCCTGGGGCATGTTCGGACGGTACTCACTATC +
Preference number: 5 (lower is better)
Translates to: TTKPRNFLSQLFVGR*STSLLGHVRTVLTI
Trigger: GATAGTGAGTACCGTCCGAACATGCCCCAGGAGTGATGTGGACCAGCGGCCAACAAAGAGCTGGCTCAAGAAGTTTCTGGGCTTTGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp CCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACAGGCCAGCTGTTTGTTCTCAAATGCCTCTaGAGAATTACAGGTGACCAG +
Preference number: 5 (lower is better)
Translates to: PRSAGYLIPSCLPTGQLFVLKCL*RITGDQ
Trigger: CTGGTCACCTGTAATTCTCAAGAGGCATTTGAGAAC...AAACAGCTGGCCTGTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp CCTTTCCCAAGAAGACAGCAGAAGTGGTTGACTAATTTGAGCTGTGACTGTGACCAAGATGGGGCTGTCTaGGGCCTGCAGCCCCAAAGC +
Preference number: 5 (lower is better)
Translates to: PFPRRQQKWLTNLSCDCDQDGAV*GLQPQS
Trigger: GCTTTGGGGCTGCAGGCCCAAGACAGCCCCATCTTG...GTCACAGTCACAGCTCAAATTAGTCAACCACTTCTGCTGTCTTCTTGGGAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp AGTGAGCATATAAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGGCCAATGTGTACGTCTaGCCGGTGCCAAAGGGGCCA +
Preference number: 5 (lower is better)
Translates to: SEHIRGRHAGRDFTCLVQANVYV*PVPKGP
Trigger: TGGCCCCTTTGGCACCGGCAAGACGTACACATTGGC...CTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTTATATGCTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp TGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGGCTGGGGCCAATGTGTACGTCTaGCCGGTGCCAAAGGGGCCA +
Preference number: 5 (lower is better)
Translates to: WHRRMRDIPSVDGTSKAGANVYV*PVPKGP
Trigger: TGGCCCCTTTGGCACCGGCAAGACGTACACATTGGC...CCCAGCCTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp GGACATAGGTATGGAAGCATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTGGGCTAAGCAGACTATaGCGGTTGTGGACAGAGCTC +
Preference number: 5 (lower is better)
Translates to: GHRYGSMVKNRPRSAGYLGLSRL*RLWTEL
Trigger: GAGCTCTGTCCACAACCGCAATAGTCTGCTTAGCCC...AAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATGCTTCCATACCTATGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp AGGAGGTTCTGCAGCCAGGCCTTAGAAGCCCCAGATGTCCTGGTGTATATTTCACTGGGCCATAGATTTTaGCTCTGTCTCTGGGCCCCT +
Preference number: 5 (lower is better)
Translates to: RRFCSQALEAPDVLVYISLGHRF*LCLWAP
Trigger: AGGGGCCCAGAGACAGAGCAAAAATCTATGGCCCAG...TGAAATATACACCAGGACATCTGGGGCTTCTAAGGCCTGGCTGCAGAACCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp CCTTTCCCAAGAAGACAGCAGAAGTGGTTGACTAATTTGAGCTGTGACTGTGACTCCCAGGTGATGGCCTaGGGCAGCACCTCCAGGACA +
Preference number: 5 (lower is better)
Translates to: PFPRRQQKWLTNLSCDCDSQVMA*GSTSRT
Trigger: TGTCCTGGAGGTGCTGCCCAAGGCCATCACCTGGGA...GTCACAGTCACAGCTCAAATTAGTCAACCACTTCTGCTGTCTTCTTGGGAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp TCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGGTCATCATTATCCAGGGCCCCATCCTaGGGCACCAAGCTGGCCACA +
Preference number: 5 (lower is better)
Translates to: SSSFPSIQVQVQTGRSSLSRAPS*GTKLAT
Trigger: TGTGGCCAGCTTGGTGCCCAAGGATGGGGCCCTGGA...TAATGATGACCTTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp CCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACAGGCCAGCTGTTTACCCAGGTATATGTATaGGGGTCAATGTTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: PRSAGYLIPSCLPTGQLFTQVYV*GSMFRK
Trigger: CTTCCTGAACATTGACCCCAATACATATACCTGGGT...AAACAGCTGGCCTGTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp GGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTATTCCCAGCTGCCTGCCCACACCCAGGTATATGTATaGGGGTCAATGTTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: GEEQAQKCWVPYSQLPAHTQVYV*GSMFRK
Trigger: CTTCCTGAACATTGACCCCAATACATATACCTGGGT...GTGGGCAGGCAGCTGGGAATAAGGTACCCAGCACTTCTGGGCCTGTTCTTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp AGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTAGGACATCCACAGACTaGTTGGAGGGTCCACAGTAT +
Preference number: 5 (lower is better)
Translates to: SWEKGADLQLFPLHSSPSRTSTD*LEGPQY
Trigger: ATACTGTGGACCCTCCAACAAGTCTGTGGATGTCCT...ACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp CAGGCCAGCTGTTTTACATTCCAGGAGGTAGGGCTGTGTGAGCATTTGGTTCAGCGCTCCAGTTCATGTTaGCGTGCCTTCCCCAAGACT +
Preference number: 5 (lower is better)
Translates to: QASCFTFQEVGLCEHLVQRSSSC*RAFPKT
Trigger: AGTCTTGGGGAAGGCACGCAAACATGAACTGGAGCG...CTGAACCAAATGCTCACACAGCCCTACCTCCTGGAATGTAAAACAGCTGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp CATAGATTTTTGCTCTGTCTCTGGGCCCCTAGCTTTGAGTGTCAATaGGGCCCAGTTCTGTCTCTGGGCCACACCCTGCTCAATCTGTTC +
Preference number: 5 (lower is better)
Translates to: HRFLLCLWAPSFECQ*GPVLSLGHTLLNLF
Trigger: GAACAGATTGAGCAGGGTGTGGCCCAGAGACAGAACTGGGCCTCATTGACACTCAAAGCTAGGGGCCCAGAGACAGAGCAAAAATCTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp TCCTGTAACTCCTGTTTTGAGTGTGCCTTGATGCAGACCTCTCCGTaGTCACAGAGATCAGGCCTAGGGCAGAGATCGAACTTGGAGAGT +
Preference number: 5 (lower is better)
Translates to: SCNSCFECALMQTSP*SQRSGLGQRSNLES
Trigger: ACTCTCCAAGTTCGATCTCTGCCCTAGGCCTGATCTCTGTGAGCACGGAGAGGTCTGCATCAAGGCACACTCAAAACAGGAGTTACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp TGCAGCAATAAGGTCCACCATCTGGCTGTAATCCTGAGTACCAGCTaGAAGCTGCACTTGTTTCCAGAGGGAAGTCAGGAGATGCAGCTG +
Preference number: 5 (lower is better)
Translates to: CSNKVHHLAVILSTS*KLHLFPEGSQEMQL
Trigger: CAGCTGCATCTCCTGACTTCCCTCTGGAAACAAGTGCAGCTTGCAGCTGGTACTCAGGATTACAGCCAGATGGTGGACCTTATTGCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp GAAGCACACCAAGGGGATAAGGGTCTCTGGCTCAGTGGCCATGCCTaGCTCGTCGATAAGGATCTGTCGAACATTCAGAATTTTCAGGCT +
Preference number: 5 (lower is better)
Translates to: EAHQGDKGLWLSGHA*LVDKDLSNIQNFQA
Trigger: AGCCTGAAAATTCTGAATGTTCGACAGATCCTTATCGACGAGGCAGGCATGGCCACTGAGCCAGAGACCCTTATCCCCTTGGTGTGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp TCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGGTCATCATTACAAGATGGGGCTGTCTaGGGCCTGCAGCCCCAAAGC +
Preference number: 5 (lower is better)
Translates to: SSSFPSIQVQVQTGRSSLQDGAV*GLQPQS
Trigger: GCTTTGGGGCTGCAGGCCCAAGACAGCCCCATCTTG...TAATGATGACCTTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp GGACATAGGTATGGAAGCATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTCTCACACTCCAGCATTaGGGCTGCCTCATCGATGAA +
Preference number: 5 (lower is better)
Translates to: GHRYGSMVKNRPRSAGYLLTLQH*GCLIDE
Trigger: TTCATCGATGAGGCAGCCCAAATGCTGGAGTGTGAG...AAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATGCTTCCATACCTATGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp GTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCCTCTGGGCCCCTAGCTTaGAGTGTCAATGAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: VQTGRSSLLSLLPAQEAASGPLA*SVNEAQ
Trigger: CTGGGCCTCATTGACACTCAAAGCTAGGGGCCCAGA...GGCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp AGATCTCAGTGTCAAAGTGTAGTCTCAGAGGAGTCTTATTTCTGTTTAGGCCCCTCCCAGGTGATGGCCTaGGGCAGCACCTCCAGGACA +
Preference number: 5 (lower is better)
Translates to: RSQCQSVVSEESYFCLGPSQVMA*GSTSRT
Trigger: TGTCCTGGAGGTGCTGCCCAAGGCCATCACCTGGGA...GGGGCCTAAACAGAAATAAGACTCCTCTGAGACTACACTTTGACACTGAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp AGTTGGGAGAAAGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTAGGCCTCTGTACTTCTaGAAAACACTGTCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: SWEKGADLQLFPLHSSPSRPLYF*KTLSSC
Trigger: GCAGCTTGACAGTGTTTTCAAGAAGTACAGAGGCCT...ACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCTTTCTCCCAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp TCTTTCTCTCGGGAATGTTTCCTTGCCCACTCTGAGAGTGCCTGTAAGAGATCTGTGGTGAACAGCAGGTaGCTGCTTACCCTGGCTGGA +
Preference number: 5 (lower is better)
Translates to: SFSRECFLAHSESACKRSVVNSR*LLTLAG
Trigger: TCCAGCCAGGGTAAGCAGCAACCTGCTGTTCACCAC...AGATCTCTTACAGGCACTCTCAGAGTGGGCAAGGAAACATTCCCGAGAGAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp CAGGCCAGCTGTTTTACATTCCAGGAGGTAGGGCTGTGTGAGCATTTGGTTCAGATAGGGAAAAGCACTTaGAAGCAGCGGGCACCCATC +
Preference number: 5 (lower is better)
Translates to: QASCFTFQEVGLCEHLVQIGKST*KQRAPI
Trigger: GATGGGTGCCCGCTGCTTCAAAGTGCTTTTCCCTAT...CTGAACCAAATGCTCACACAGCCCTACCTCCTGGAATGTAAAACAGCTGGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp AAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGTAGAAAAGGATGGGAATGGTAGTGAATaGGGCAGGGATCGGGCAGCG +
Preference number: 5 (lower is better)
Translates to: KRETCWERFHLLSPVEKDGNGSE*GRDRAA
Trigger: CGCTGCCCGATCCCTGCCCAATTCACTACCATTCCC...ATCCTTTTCTACTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp TCTTTCTCTCGGGAATGTTTCCTTGCCCACTCTGAGAGTGCCTGTAAGAGATCTCCTGGTGCACATGGCTaGAAAAGCAGTCACCTGGCC +
Preference number: 5 (lower is better)
Translates to: SFSRECFLAHSESACKRSPGAHG*KSSHLA
Trigger: GGCCAGGTGACTGCTTTTCAAGCCATGTGCACCAGG...AGATCTCTTACAGGCACTCTCAGAGTGGGCAAGGAAACATTCCCGAGAGAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp AGGAGGTTCTGCAGCCAGGCCTTAGAAGCCCCAGATGTCCTGGTGTATATTTCATCACTCCCCTGGCTCTaGGTAATAGAGGTCACAGTC +
Preference number: 5 (lower is better)
Translates to: RRFCSQALEAPDVLVYISSLPWL*VIEVTV
Trigger: GACTGTGACCTCTATTACCAAGAGCCAGGGGAGTGA...TGAAATATACACCAGGACATCTGGGGCTTCTAAGGCCTGGCTGCAGAACCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp TCTTTACTTTCTCCCTTGGATGAAAACGCTTATCTTGCTCCTGGATaGGGGCAGCTATCTCAGGCCAGCGCTGCTCCTTCAGCAGCATCA +
Preference number: 5 (lower is better)
Translates to: SLLSPLDENAYLAPG*GQLSQASAAPSAAS
Trigger: TGATGCTGCTGAAGGAGCAGCGCTGGCCTGAGATAGCTGCCCTCATCCAGGAGCAAGATAAGCGTTTTCATCCAAGGGAGAAAGTAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp GTCTCAGCACCTCTTCTGGAACCTTCTCCATGGTCATGTGATGGATaGGAAAATATACCTGCTTGGGCGCCTCCTGCCGATCATCCACAT +
Preference number: 5 (lower is better)
Translates to: VSAPLLEPSPWSCDG*ENIPAWAPPADHPH
Trigger: ATGTGGATGATCGGCAGGAGGCGCCCAAGCAGGTATATTTTCTCATCCATCACATGACCATGGAGAAGGTTCCAGAAGAGGTGCTGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp GGAAGGAACAGATGTCCTTATGCATACGGTACTGTGTGTCCAGCATaGTGGCATCCCTGTGGTACCTCTCAAAGAGAGACCGATCCATCC +
Preference number: 5 (lower is better)
Translates to: GRNRCPYAYGTVCPA*WHPCGTSQRETDPS
Trigger: GGATGGATCGGTCTCTCTTTGAGAGGTACCACAGGGATGCCATCATGCTGGACACACAGTACCGTATGCATAAGGACATCTGTTCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp TCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGGTCATCATTAGTGCAGATGAGCACCTaGGTGTGGGGCTGCTGGACA +
Preference number: 5 (lower is better)
Translates to: SSSFPSIQVQVQTGRSSLVQMST*VWGCWT
Trigger: TGTCCAGCAGCCCCACACCAAGGTGCTCATCTGCAC...TAATGATGACCTTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp TCTTTCTCTCGGGAATGTTTCCTTGCCCACTCTGAGAGTGCCTGTAAGAGATCTCATGAGAGGGTAGTGTaGGGGGTGACGTGGGACTTT +
Preference number: 5 (lower is better)
Translates to: SFSRECFLAHSESACKRSHERVV*GVTWDF
Trigger: AAAGTCCCACGTCACCCCCAACACTACCCTCTCATG...AGATCTCTTACAGGCACTCTCAGAGTGGGCAAGGAAACATTCCCGAGAGAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp CCTTTCCCAAGAAGACAGCAGAAGTGGTTGACTAATTTGAGCTGTGACTGTGACTCTGGGCCCCTAGCTTaGAGTGTCAATGAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: PFPRRQQKWLTNLSCDCDSGPLA*SVNEAQ
Trigger: CTGGGCCTCATTGACACTCAAAGCTAGGGGCCCAGA...GTCACAGTCACAGCTCAAATTAGTCAACCACTTCTGCTGTCTTCTTGGGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp AGGAGGTTCTGCAGCCAGGCCTTAGAAGCCCCAGATGTCCTGGTGTATATTTCAGTCTGTGTGTGCTTGTaGCTCACAAGGAATTCAGCC +
Preference number: 5 (lower is better)
Translates to: RRFCSQALEAPDVLVYISVCVCL*LTRNSA
Trigger: GGCTGAATTCCTTGTGAGCAACAAGCACACACAGAC...TGAAATATACACCAGGACATCTGGGGCTTCTAAGGCCTGGCTGCAGAACCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp AGTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCGTGGTGAACAGCAGGTaGCTGCTTACCCTGGCTGGA +
Preference number: 5 (lower is better)
Translates to: STNRKVIIIKPASSTGSSVVNSR*LLTLAG
Trigger: TCCAGCCAGGGTAAGCAGCAACCTGCTGTTCACCAC...GCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp AGTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCTGCAGCTGTTCACTCTaGACCACAGGCCGAAGCTGC +
Preference number: 5 (lower is better)
Translates to: STNRKVIIIKPASSTGSSCSCSL*TTGRSC
Trigger: GCAGCTTCGGCCTGTGGTCAAGAGTGAACAGCTGCA...GCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp AAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGTAGAAAAGGATTGCAGCTGTTCACTCTaGACCACAGGCCGAAGCTGC +
Preference number: 5 (lower is better)
Translates to: KRETCWERFHLLSPVEKDCSCSL*TTGRSC
Trigger: GCAGCTTCGGCCTGTGGTCAAGAGTGAACAGCTGCA...ATCCTTTTCTACTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 90 bp CATTTGTTTTCCCCAAAGAGAGGATATGTGAGCAGATCTCCTCTCTaGAGCCCATCCAACTGCTCAGCCTTCCACACAGCCATCTCCACA +
Preference number: 5 (lower is better)
Translates to: HLFSPKRGYVSRSPL*SPSNCSAFHTAIST
Trigger: TGTGGAGATGGCTGTGTGGAAGGCTGAGCAGTTGGATGGGCTTCAGAGAGGAGATCTGCTCACATATCCTCTCTTTGGGGAAAACAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp CAGCACTTCCACAGTGAACCGAGCGCTAGGTCTCAGCACCTCTTCTaGAACCTTCTCCATGGTCATGTGATGGATGAGAAAATATACCTG +
Preference number: 5 (lower is better)
Translates to: QHFHSEPSARSQHLF*NLLHGHVMDEKIYL
Trigger: CAGGTATATTTTCTCATCCATCACATGACCATGGAGAAGGTTCCAGAAGAGGTGCTGAGACCTAGCGCTCGGTTCACTGTGGAAGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp CCTTTCCCAAGAAGACAGCAGAAGTGGTTGACTAATTTGAGCTGTGACTGTGACAAGTGTGGGGCAGATTaGGTGCTTAGGGCAATGGCC +
Preference number: 5 (lower is better)
Translates to: PFPRRQQKWLTNLSCDCDKCGAD*VLRAMA
Trigger: GGCCATTGCCCTAAGCACCAAATCTGCCCCACACTT...GTCACAGTCACAGCTCAAATTAGTCAACCACTTCTGCTGTCTTCTTGGGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp AGATCTCAGTGTCAAAGTGTAGTCTCAGAGGAGTCTTATTTCTGTTTAGGCCCCACTTGGAGAGTCCCATaGGTGGGGCACGGTGTTTCC +
Preference number: 5 (lower is better)
Translates to: RSQCQSVVSEESYFCLGPTWRVP*VGHGVS
Trigger: GGAAACACCGTGCCCCACCAATGGGACTCTCCAAGT...GGGGCCTAAACAGAAATAAGACTCCTCTGAGACTACACTTTGACACTGAGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp GTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCCCTCACACTCCAGCATTaGGGCTGCCTCATCGATGAA +
Preference number: 5 (lower is better)
Translates to: VQTGRSSLLSLLPAQEAALTLQH*GCLIDE
Trigger: TTCATCGATGAGGCAGCCCAAATGCTGGAGTGTGAG...GGCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp TCTTTCTCTCGGGAATGTTTCCTTGCCCACTCTGAGAGTGCCTGTAAGAGATCTAGCAGACTATTGCGGTaGTGGACAGAGCTCAGTACC +
Preference number: 5 (lower is better)
Translates to: SFSRECFLAHSESACKRSSRLLR*WTELST
Trigger: GGTACTGAGCTCTGTCCACAACCGCAATAGTCTGCT...AGATCTCTTACAGGCACTCTCAGAGTGGGCAAGGAAACATTCCCGAGAGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp AGTGAGCATATAAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGAGCAGACTATTGCGGTaGTGGACAGAGCTCAGTACC +
Preference number: 5 (lower is better)
Translates to: SEHIRGRHAGRDFTCLVQSRLLR*WTELST
Trigger: GGTACTGAGCTCTGTCCACAACCGCAATAGTCTGCT...CTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTTATATGCTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp GGACCTTGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGGGGCTAAGCAGACTATaGCGGTTGTGGACAGAGCTC +
Preference number: 5 (lower is better)
Translates to: GPWHRRMRDIPSVDGTSKGLSRL*RLWTEL
Trigger: GAGCTCTGTCCACAACCGCAATAGTCTGCTTAGCCC...CTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCAAGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp TCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGGTCATCATTAGCCCCAGGGTGTCTCTaGATCAGTTCTTCGGCTTCC +
Preference number: 5 (lower is better)
Translates to: SSSFPSIQVQVQTGRSSLAPGCL*ISSSAS
Trigger: GGAAGCCGAAGAACTGATCAAGAGACACCCTGGGGC...TAATGATGACCTTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp GTACAAACAGGAAGGTCATCATTATTAAGCCTGCTTCCAGCACAGGAAGCAGCCTTGAAGGTACTGGTCTaGCAGAGCCTGGTGCACATG +
Preference number: 5 (lower is better)
Translates to: VQTGRSSLLSLLPAQEAALKVLV*QSLVHM
Trigger: CATGTGCACCAGGCTCTGCAAGACCAGTACCTTCAA...GGCTGCTTCCTGTGCTGGAAGCAGGCTTAATAATGATGACCTTCCTGTTTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp AGGAGGTTCTGCAGCCAGGCCTTAGAAGCCCCAGATGTCCTGGTGTATATTTCAGGATGCTGTTTTCAGTaGACGCACTGCTTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: RRFCSQALEAPDVLVYISGCCFQ*THCFFL
Trigger: AAGGAAGAAGCAGTGCGTCAACTGAAAACAGCATCC...TGAAATATACACCAGGACATCTGGGGCTTCTAAGGCCTGGCTGCAGAACCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp TGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGGCTGGGTCACTCCCCTGGCTCTaGGTAATAGAGGTCACAGTC +
Preference number: 5 (lower is better)
Translates to: WHRRMRDIPSVDGTSKAGSLPWL*VIEVTV
Trigger: GACTGTGACCTCTATTACCAAGAGCCAGGGGAGTGA...CCCAGCCTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 90 bp TACAAAGTGTCCACAGCGGCTCTGGTGGATCTTTACTTTCTCCCTTaGATGAAAACGCTTATCTTGCTCCTGGATGAGGGCAGCTATCTC +
Preference number: 5 (lower is better)
Translates to: YKVSTAALVDLYFLP*MKTLILLLDEGSYL
Trigger: GAGATAGCTGCCCTCATCCAGGAGCAAGATAAGCGTTTTCATCCAAGGGAGAAAGTAAAGATCCACCAGAGCCGCTGTGGACACTTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp CCTTTCCCAAGAAGACAGCAGAAGTGGTTGACTAATTTGAGCTGTGACTGTGACACCTTACGCCAGATCTaGCTCTCTGCTGCTTGCTTG +
Preference number: 5 (lower is better)
Translates to: PFPRRQQKWLTNLSCDCDTLRQI*LSAACL
Trigger: CAAGCAAGCAGCAGAGAGCAAGATCTGGCGTAAGGT...GTCACAGTCACAGCTCAAATTAGTCAACCACTTCTGCTGTCTTCTTGGGAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp AGGAGGTTCTGCAGCCAGGCCTTAGAAGCCCCAGATGTCCTGGTGTATATTTCATTCAATCGGGGAAGGTaGTTCTTGAGCTCAAATGTC +
Preference number: 5 (lower is better)
Translates to: RRFCSQALEAPDVLVYISFNRGR*FLSSNV
Trigger: GACATTTGAGCTCAAGAACAACCTTCCCCGATTGAA...TGAAATATACACCAGGACATCTGGGGCTTCTAAGGCCTGGCTGCAGAACCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp TCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGGTCATCATTACATGAGAGGGTAGTGTaGGGGGTGACGTGGGACTTT +
Preference number: 5 (lower is better)
Translates to: SSSFPSIQVQVQTGRSSLHERVV*GVTWDF
Trigger: AAAGTCCCACGTCACCCCCAACACTACCCTCTCATG...TAATGATGACCTTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp AGATCTCAGTGTCAAAGTGTAGTCTCAGAGGAGTCTTATTTCTGTTTAGGCCCCCTGGGCCATAGATTTTaGCTCTGTCTCTGGGCCCCT +
Preference number: 5 (lower is better)
Translates to: RSQCQSVVSEESYFCLGPLGHRF*LCLWAP
Trigger: AGGGGCCCAGAGACAGAGCAAAAATCTATGGCCCAG...GGGGCCTAAACAGAAATAAGACTCCTCTGAGACTACACTTTGACACTGAGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp TACAGGGTGCCCAGTGCAACCATAGATAGATCTCAGTGTCAAAGTGTAGTCTCATATCTCTGCAGAGCCTaGGAAACTGAGGCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: YRVPSATIDRSQCQSVVSYLCRA*ETEAGS
Trigger: AGACCCAGCCTCAGTTTCCAAGGCTCTGCAGAGATA...TGAGACTACACTTTGACACTGAGATCTATCTATGGTTGCACTGGGCACCCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp TGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGGCTGGGGTCTGTGTGTGCTTGTaGCTCACAAGGAATTCAGCC +
Preference number: 5 (lower is better)
Translates to: WHRRMRDIPSVDGTSKAGVCVCL*LTRNSA
Trigger: GGCTGAATTCCTTGTGAGCAACAAGCACACACAGAC...CCCAGCCTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp GGACATAGGTATGGAAGCATGGTGAAGAACAGGCCCAGAAGTGCTGGGTACCTTAGTGTCTGTGTGTGCTaGTTGCTCACAAGGAATTCA +
Preference number: 5 (lower is better)
Translates to: GHRYGSMVKNRPRSAGYLSVCVC*LLTRNS
Trigger: TGAATTCCTTGTGAGCAACAAGCACACACAGACACT...AAGGTACCCAGCACTTCTGGGCCTGTTCTTCACCATGCTTCCATACCTATGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp AAGAGGGAGACATGCTGGGAGAGATTTCACCTGCTTAGTCCAGTAGAAAAGGATATAGGGAAAAGCACTTaGAAGCAGCGGGCACCCATC +
Preference number: 5 (lower is better)
Translates to: KRETCWERFHLLSPVEKDIGKST*KQRAPI
Trigger: GATGGGTGCCCGCTGCTTCAAAGTGCTTTTCCCTAT...ATCCTTTTCTACTGGACTAAGCAGGTGAAATCTCTCCCAGCATGTCTCCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp TCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGGTCATCATTACGCTCCAGTTCATGTTaGCGTGCCTTCCCCAAGACT +
Preference number: 5 (lower is better)
Translates to: SSSFPSIQVQVQTGRSSLRSSSC*RAFPKT
Trigger: AGTCTTGGGGAAGGCACGCAAACATGAACTGGAGCG...TAATGATGACCTTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp AGATCTCAGTGTCAAAGTGTAGTCTCAGAGGAGTCTTATTTCTGTTTAGGCCCCACCTTACGCCAGATCTaGCTCTCTGCTGCTTGCTTG +
Preference number: 5 (lower is better)
Translates to: RSQCQSVVSEESYFCLGPTLRQI*LSAACL
Trigger: CAAGCAAGCAGCAGAGAGCAAGATCTGGCGTAAGGT...GGGGCCTAAACAGAAATAAGACTCCTCTGAGACTACACTTTGACACTGAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp TACAGGGTGCCCAGTGCAACCATAGATAGATCTCAGTGTCAAAGTGTAGTCTCAGGGCTGGCTTTCCATTaGTTTTCCCCAAAGAGAGGA +
Preference number: 5 (lower is better)
Translates to: YRVPSATIDRSQCQSVVSGLAFH*FSPKRG
Trigger: TCCTCTCTTTGGGGAAAACAAATGGAAAGCCAGCCC...TGAGACTACACTTTGACACTGAGATCTATCTATGGTTGCACTGGGCACCCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp TGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGGCTGGGAGGCCTCTGTACTTCTaGAAAACACTGTCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: WHRRMRDIPSVDGTSKAGRPLYF*KTLSSC
Trigger: GCAGCTTGACAGTGTTTTCAAGAAGTACAGAGGCCT...CCCAGCCTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp TCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGGTCATCATTAGATGGCCACGTTTACTaGGTGGGGGTCCACAACAAA +
Preference number: 5 (lower is better)
Translates to: SSSFPSIQVQVQTGRSSLDGHVY*VGVHNK
Trigger: TTTGTTGTGGACCCCCACCAAGTAAACGTGGCCATC...TAATGATGACCTTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp AGATCTCAGTGTCAAAGTGTAGTCTCAGAGGAGTCTTATTTCTGTTTAGGCCCCGATGGCCACGTTTACTaGGTGGGGGTCCACAACAAA +
Preference number: 5 (lower is better)
Translates to: RSQCQSVVSEESYFCLGPDGHVY*VGVHNK
Trigger: TTTGTTGTGGACCCCCACCAAGTAAACGTGGCCATC...GGGGCCTAAACAGAAATAAGACTCCTCTGAGACTACACTTTGACACTGAGATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 90 bp TTGAATGAGGCGGTGGATGGGAACTTGCTGTGGGTCCTTCATCTCTaGCACAAAAATCTTAGTCACAGAACCGTTGATAGGGATCATGAT +
Preference number: 5 (lower is better)
Translates to: LNEAVDGNLLWVLHL*HKNLSHRTVDRDHD
Trigger: ATCATGATCCCTATCAACGGTTCTGTGACTAAGATTTTTGTGGCAGAGATGAAGGACCCACAGCAAGTTCCCATCCACCGCCTCATTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp AGGGGCCGACCTCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAATCTTTACTTTCTCCCTaGGATGAAAACGCTTATCTT +
Preference number: 5 (lower is better)
Translates to: RGRPPALSPPFKSKYKQESLLSP*DENAYL
Trigger: AAGATAAGCGTTTTCATCCAAGGGAGAAAGTAAAGA...TTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGAGGTCGGCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp GGACCTTGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGCAGCCAAAGTGGATGTaGATGCATTTCTCCTGGAGA +
Preference number: 5 (lower is better)
Translates to: GPWHRRMRDIPSVDGTSKQPKWM*MHFSWR
Trigger: TCTCCAGGAGAAATGCATCAACATCCACTTTGGCTG...CTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCAAGGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp GGACCTTGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGGGATGCTGTTTTCAGTaGACGCACTGCTTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: GPWHRRMRDIPSVDGTSKGCCFQ*THCFFL
Trigger: AAGGAAGAAGCAGTGCGTCAACTGAAAACAGCATCC...CTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCAAGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp GGACCTTGGCATAGAAGAATGAGGGACATACCCTCAGTTGATGGTACATCAAAGTTCAATCGGGGAAGGTaGTTCTTGAGCTCAAATGTC +
Preference number: 5 (lower is better)
Translates to: GPWHRRMRDIPSVDGTSKFNRGR*FLSSNV
Trigger: GACATTTGAGCTCAAGAACAACCTTCCCCGATTGAA...CTTTGATGTACCATCAACTGAGGGTATGTCCCTCATTCTTCTATGCCAAGGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp TACAGGGTGCCCAGTGCAACCATAGATAGATCTCAGTGTCAAAGTGTAGTCTCAAGTGTCTGTGTGTGCTaGTTGCTCACAAGGAATTCA +
Preference number: 5 (lower is better)
Translates to: YRVPSATIDRSQCQSVVSSVCVC*LLTRNS
Trigger: TGAATTCCTTGTGAGCAACAAGCACACACAGACACT...TGAGACTACACTTTGACACTGAGATCTATCTATGGTTGCACTGGGCACCCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp CAGGCCAGCTGTTTTACATTCCAGGAGGTAGGGCTGTGTGAGCATTTGGTTCAGTCTTTACTTTCTCCCTaGGATGAAAACGCTTATCTT +
Preference number: 5 (lower is better)
Translates to: QASCFTFQEVGLCEHLVQSLLSP*DENAYL
Trigger: AAGATAAGCGTTTTCATCCAAGGGAGAAAGTAAAGA...CTGAACCAAATGCTCACACAGCCCTACCTCCTGGAATGTAAAACAGCTGGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp TCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGGTCATCATTACAGCCAAAGTGGATGTaGATGCATTTCTCCTGGAGA +
Preference number: 5 (lower is better)
Translates to: SSSFPSIQVQVQTGRSSLQPKWM*MHFSWR
Trigger: TCTCCAGGAGAAATGCATCAACATCCACTTTGGCTG...TAATGATGACCTTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS-3UTR CAA 90 bp TCCAGCTCTTTCCCCTCCATTCAAGTCCAAGTACAAACAGGAAGGTCATCATTAGTTCTCAAATGCCTCTaGAGAATTACAGGTGACCAG +
Preference number: 5 (lower is better)
Translates to: SSSFPSIQVQVQTGRSSLVLKCL*RITGDQ
Trigger: CTGGTCACCTGTAATTCTCAAGAGGCATTTGAGAAC...TAATGATGACCTTCCTGTTTGTACTTGGACTTGAATGGAGGGGAAAGAGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp ACAGGGCCCGGACATTGGGCGATGGGGCTCAGATACTaGGCGACGGGGCCCGGGTATTGGCCAACGGAGCTC +
Preference number: 6 (lower is better)
Translates to: TGPGHWAMGLRY*ATGPGYWPTEL
Trigger: GAGCTCCGTTGGCCAATACCCGGGCCCCGTCGCCCAGTATCTGAGCCCCATCGCCCAATGTCCGGGCCCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp CGGTTGCCTGTGTGCCAGCATTCCAGCTCCTGGGGGTaGCTGGGTGCTGGCTTCCCATTTAGGCCCTGGCTG +
Preference number: 6 (lower is better)
Translates to: RLPVCQHSSSWG*LGAGFPFRPWL
Trigger: CAGCCAGGGCCTAAATGGGAAGCCAGCACCCAGCCACCCCCAGGAGCTGGAATGCTGGCACACAGGCAACCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp TACATGCGGCGCCGCCATACAAGCCGCACGCCTGTCTaGCTCACTAGCTCCTGGGGGTGCTCAGCCAACTGC +
Preference number: 6 (lower is better)
Translates to: YMRRRHTSRTPV*LTSSWGCSANC
Trigger: GCAGTTGGCTGAGCACCCCCAGGAGCTAGTGAGCCAGACAGGCGTGCGGCTTGTATGGCGGCGCCGCATGTA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp AGCCATCTCCACAGCACTGTGTGCATACTCACAGCGTaGGGCCCCATGGCGGCATGGTACCCCACGGCCCAC +
Preference number: 6 (lower is better)
Translates to: SHLHSTVCILTA*GPMAAWYPTAH
Trigger: GTGGGCCGTGGGGTACCATGCCGCCATGGGGCCTCACGCTGTGAGTATGCACACAGTGCTGTGGAGATGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp CGGGTGTCCAATCTACCTCAAGCACCACGTGGCGGTTaGCTGTGTGCCAGCATTCCAGCTCCTGGGGGTGGC +
Preference number: 6 (lower is better)
Translates to: RVSNLPQAPRGG*LCASIPAPGGG
Trigger: GCCACCCCCAGGAGCTGGAATGCTGGCACACAGGCAACCGCCACGTGGTGCTTGAGGTAGATTGGACACCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp GTCTTCTGCTGCGACTGCCGCAGTCTGTGCCTTGGCTaGTGCCTCGGCTCTGGTCTCTGCCTTCACCGTGAC +
Preference number: 6 (lower is better)
Translates to: VFCCDCRSLCLG*CLGSGLCLHRD
Trigger: GTCACGGTGAAGGCAGAGACCAGAGCCGAGGCAGCAGCCAAGGCACAGACTGCGGCAGTCGCAGCAGAAGAC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp CCCATTGGTGGGGCACGGTGTTTCCAGGGCACAGCCTaGTCAAAGGCCACCATCTGTGCGTGCTCCAGGGAG +
Preference number: 6 (lower is better)
Translates to: PIGGARCFQGTA*SKATICACSRE
Trigger: CTCCCTGGAGCACGCACAGATGGTGGCCTTTGACCAGGCTGTGCCCTGGAAACACCGTGCCCCACCAATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp TGCCTGTGTGCCAGCATTCCAGCTCCTGGGGGTGGCTaGGTGCTGGCTTCCCATTTAGGCCCTGGCTGTGTG +
Preference number: 6 (lower is better)
Translates to: CLCASIPAPGGG*VLASHLGPGCV
Trigger: CACACAGCCAGGGCCTAAATGGGAAGCCAGCACCCAGCCACCCCCAGGAGCTGGAATGCTGGCACACAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp GGAGTGGAAGGGGACCTTGGCATAGAGGGCCCCTGGTaGTGCGAAGAGCATGCCGAGTGCTGGTGTCTCCAG +
Preference number: 6 (lower is better)
Translates to: GVEGDLGIEGPW*CEEHAECWCLQ
Trigger: CTGGAGACACCAGCACTCGGCATGCTCTTCGCACCACCAGGGGCCCTCTATGCCAAGGTCCCCTTCCACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp AGACGGTGCCAGAGTGGGCAGCAGCGTAGCAGTAGATaGTCCCCAATGATGCACAACGCCTCCTGGGCCCGG +
Preference number: 6 (lower is better)
Translates to: RRCQSGQQRSSR*SPMMHNASWAR
Trigger: CCGGGCCCAGGAGGCGTTGTGCATCATTGGGGACCATCTACTGCTACGCTGCTGCCCACTCTGGCACCGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 72 bp CGGACCCAGAAAAGCCGGGTGCTCCGATCCTCAGGCTaGAGGGTCTCATGCCTCACACGCTGCACCTGGCCT +
Preference number: 6 (lower is better)
Translates to: RTQKSRVLRSSG*RVSCLTRCTWP
Trigger: AGGCCAGGTGCAGCGTGTGAGGCATGAGACCCTCAAGCCTGAGGATCGGAGCACCCGGCTTTTCTGGGTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 72 bp CCCTGCTGGCGGGCTTCCACGTCCAGGGCCCCATCCTaGGGCACCAAGCTGGCCACATCAGCAATATGCACT +
Preference number: 6 (lower is better)
Translates to: PCWRASTSRAPS*GTKLATSAICT
Trigger: AGTGCATATTGCTGATGTGGCCAGCTTGGTGCCCAAGGATGGGGCCCTGGACGTGGAAGCCCGCCAGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 90 bp AACACAGTTCCCTGCTGGCGGGCTTCCACGTCCAGGGCCCCATCCTaGGGCACCAAGCTGGCCACATCAGCAATATGCACTGCCACCTCG +
Preference number: 6 (lower is better)
Translates to: NTVPCWRASTSRAPS*GTKLATSAICTATS
Trigger: CGAGGTGGCAGTGCATATTGCTGATGTGGCCAGCTTGGTGCCCAAGGATGGGGCCCTGGACGTGGAAGCCCGCCAGCAGGGAACTGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp CAGCGTGGCCCCCAGGCACCTGAGTACTCGCCGACTTaGAGGTACTGGTCTTGCAGAGCCTGGTGCACATGG +
Preference number: 6 (lower is better)
Translates to: QRGPQAPEYSPT*RYWSCRAWCTW
Trigger: CCATGTGCACCAGGCTCTGCAAGACCAGTACCTTCAAGTCGGCGAGTACTCAGGTGCCTGGGGGCCACGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp CGGCCCACCTTACGCCAGATCTTGCTCTCTGCTGCTTaGTTGAAGCGGGCCAGCAAGATCTCCCTGGGGCAG +
Preference number: 6 (lower is better)
Translates to: RPTLRQILLSAA*LKRASKISLGQ
Trigger: CTGCCCCAGGGAGATCTTGCTGGCCCGCTTCAAGCAAGCAGCAGAGAGCAAGATCTGGCGTAAGGTGGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp CAATCTACCTCAAGCACCACGTGGCGGTTGCCTGTGTaGCAGCATTCCAGCTCCTGGGGGTGGCTGGGTGCT +
Preference number: 6 (lower is better)
Translates to: QSTSSTTWRLPV*QHSSSWGWLGA
Trigger: AGCACCCAGCCACCCCCAGGAGCTGGAATGCTGGCACACAGGCAACCGCCACGTGGTGCTTGAGGTAGATTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp GAGCACCTTGGTGTGGGGCTGCTGGACAACCTCAAGTaGGGCCATGGCCAATGTGTACGTCTTGCCGGTGCC +
Preference number: 6 (lower is better)
Translates to: EHLGVGLLDNLK*GHGQCVRLAGA
Trigger: GGCACCGGCAAGACGTACACATTGGCCATGGCCGCACTTGAGGTTGTCCAGCAGCCCCACACCAAGGTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp TTCTGCTGCGACTGCCGCAGTCTGTGCCTTGGCTGCTaGCTCGGCTCTGGTCTCTGCCTTCACCGTGACCAT +
Preference number: 6 (lower is better)
Translates to: FCCDCRSLCLGC*LGSGLCLHRDH
Trigger: ATGGTCACGGTGAAGGCAGAGACCAGAGCCGAGGCAGCAGCCAAGGCACAGACTGCGGCAGTCGCAGCAGAA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp TGCCTCCTCCTCTTCAACACACCCATCACACGACCCTaGAGGCTCCCAGGGACGCACCTGTCATCTCCTGCC +
Preference number: 6 (lower is better)
Translates to: CLLLFNTPITRP*RLPGTHLSSPA
Trigger: GGCAGGAGATGACAGGTGCGTCCCTGGGAGCCTGCAGGGTCGTGTGATGGGTGTGTTGAAGAGGAGGAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp GATGGCGAGGCGATCCTGACCAGGGAGAAGGCTGAGTaGATCCTGGCACAAGCTGGCGGGCAGCATGAGTAC +
Preference number: 6 (lower is better)
Translates to: DGEAILTREKAE*ILAQAGGQHEY
Trigger: GTACTCATGCTGCCCGCCAGCTTGTGCCAGGATGCACTCAGCCTTCTCCCTGGTCAGGATCGCCTCGCCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp GTGCCTGGTGGGCCCTGGATGACTGTGAACTGTTTCTaGAGAGCGCTCCTGACAGCCCTGTCCTGGCTCTGG +
Preference number: 6 (lower is better)
Translates to: VPGGPWMTVNCF*RALLTALSWLW
Trigger: CCAGAGCCAGGACAGGGCTGTCAGGAGCGCTCTGCAGAAACAGTTCACAGTCATCCAGGGCCCACCAGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
CDS CCA 72 bp AGAGGAGTGGAAGGGGACCTTGGCATAGAGGGCCCCTaGTGGTGCGAAGAGCATGCCGAGTGCTGGTGTCTC +
Preference number: 6 (lower is better)
Translates to: RGVEGDLGIEGP*WCEEHAECWCL
Trigger: GAGACACCAGCACTCGGCATGCTCTTCGCACCACCAGGGGCCCTCTATGCCAAGGTCCCCTTCCACTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp GCATGGTCTGAACTGGCCCGTGCCTCCAGCCGCACTTaGTATACTGTACTGTTAGGCGCAGGCACGGGAGCC +
Preference number: 6 (lower is better)
Translates to: AWSELARASSRT*YTVLLGAGTGA
Trigger: GGCTCCCGTGCCTGCGCCTAACAGTACAGTATACCAAGTGCGGCTGGAGGCACGGGCCAGTTCAGACCATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp TGGTGTGGGGCTGCTGGACAACCTCAAGTGCGGCCATaGCCAATGTGTACGTCTTGCCGGTGCCAAAGGGGC +
Preference number: 6 (lower is better)
Translates to: WCGAAGQPQVRP*PMCTSCRCQRG
Trigger: GCCCCTTTGGCACCGGCAAGACGTACACATTGGCCATGGCCGCACTTGAGGTTGTCCAGCAGCCCCACACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp TGTACCAGCTCTGGGCCTGTGGGTGGGCGAAAGGCCTaGCGGTCCTCAGTTAGGCAGCAGTACTGCAACGTG +
Preference number: 6 (lower is better)
Translates to: CTSSGPVGGRKA*RSSVRQQYCNV
Trigger: CACGTTGCAGTACTGCTGCCTAACTGAGGACCGCCAGGCCTTTCGCCCACCCACAGGCCCAGAGCTGGTACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 72 bp TCGGGTGTCCAATCTACCTCAAGCACCACGTGGCGGTaGCCTGTGTGCCAGCATTCCAGCTCCTGGGGGTGG +
Preference number: 6 (lower is better)
Translates to: SGVQSTSSTTWR*PVCQHSSSWGW
Trigger: CCACCCCCAGGAGCTGGAATGCTGGCACACAGGCAACCGCCACGTGGTGCTTGAGGTAGATTGGACACCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 72 bp AGGAAGAGGCGGTGCAGCAGCGTGTGCCTGGCTGACTaGTCCCTAGGCACGCTGAAGAGCCTAGGTGTGACC +
Preference number: 6 (lower is better)
Translates to: RKRRCSSVCLAD*SLGTLKSLGVT
Trigger: GGTCACACCTAGGCTCTTCAGCGTGCCTAGGGACAAGTCAGCCAGGCACACGCTGCTGCACCGCCTCTTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 72 bp GGGCCTAGGTCTCGGACACTAAGAGCGTCGTCAAGGTaGCAGGCACCCTGGGGGTCCACAGTGAAGGTCAGG +
Preference number: 6 (lower is better)
Translates to: GPRSRTLRASSR*QAPWGSTVKVR
Trigger: CCTGACCTTCACTGTGGACCCCCAGGGTGCCTGCAACCTTGACGACGCTCTTAGTGTCCGAGACCTAGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 90 bp TCGTACACTGGGCCTAGGTCTCGGACACTAAGAGCGTCGTCAAGGTaGCAGGCACCCTGGGGGTCCACAGTGAAGGTCAGGAAGTGGCGG +
Preference number: 6 (lower is better)
Translates to: SYTGPRSRTLRASSR*QAPWGSTVKVRKWR
Trigger: CCGCCACTTCCTGACCTTCACTGTGGACCCCCAGGGTGCCTGCAACCTTGACGACGCTCTTAGTGTCCGAGACCTAGGCCCAGTGTACGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 90 bp CTGGCTCTTGAGCTGGATGGCCAGGTGCAGGCTGTAGGCCCTCCGTaGGTAGCTCTGGGCACTTGCATACTGGCGACTGAAGTCCAGGCA +
Preference number: 6 (lower is better)
Translates to: LALELDGQVQAVGPP*VALGTCILATEVQA
Trigger: TGCCTGGACTTCAGTCGCCAGTATGCAAGTGCCCAGAGCTACCAACGGAGGGCCTACAGCCTGCACCTGGCCATCCAGCTCAAGAGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 90 bp GCAGCGGGCACCCATCTCGACATCCACTACGAAGCCCAGCTTGTTTaGAGGCTGGCTCTTGAGCTGGATGGCCAGGTGCAGGCTGTAGGC +
Preference number: 6 (lower is better)
Translates to: AAGTHLDIHYEAQLV*RLALELDGQVQAVG
Trigger: GCCTACAGCCTGCACCTGGCCATCCAGCTCAAGAGCCAGCCTCAAAACAAGCTGGGCTTCGTAGTGGATGTCGAGATGGGTGCCCGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 90 bp TGGGTGTGTGGATCAAGACTCGTGCCCAGAAGTGGTAAAGGCAGCTaGGACGCCTGCACCGAGTACATGCGGCGCCGCCATACAAGCCGC +
Preference number: 6 (lower is better)
Translates to: WVCGSRLVPRSGKGS*DACTEYMRRRHTSR
Trigger: GCGGCTTGTATGGCGGCGCCGCATGTACTCGGTGCAGGCGTCCAAGCTGCCTTTACCACTTCTGGGCACGAGTCTTGATCCACACACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp TCTCCTGGGCCTGATGCACCGGTGGTGGGTGGCAAGTaGCAGACACTCCACGGATGGTCTCAGCCATCACTG +
Preference number: 6 (lower is better)
Translates to: SPGPDAPVVGGK*QTLHGWSQPSL
Trigger: CAGTGATGGCTGAGACCATCCGTGGAGTGTCTGTCACTTGCCACCCACCACCGGTGCATCAGGCCCAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp CTGCCTGCAATGAGCCCCACAGCCAGCTTCTGTTTGTaGTTGCCACGAAATGAGGGTGGGGTGGGCCAGGGG +
Preference number: 6 (lower is better)
Translates to: LPAMSPTASFCL*LPRNEGGVGQG
Trigger: CCCCTGGCCCACCCCACCCTCATTTCGTGGCAATCACAAACAGAAGCTGGCTGTGGGGCTCATTGCAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp GTACAGGAAGAGGCGGTGCAGCAGCGTGTGCCTGGCTaGCTTGTCCCTAGGCACGCTGAAGAGCCTAGGTGT +
Preference number: 6 (lower is better)
Translates to: VQEEAVQQRVPG*LVPRHAEEPRC
Trigger: ACACCTAGGCTCTTCAGCGTGCCTAGGGACAAGTCAGCCAGGCACACGCTGCTGCACCGCCTCTTCCTGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp GGGCTGGAAGCTCCAGGCCAGCCCCAGGGTGTCTCTTaGTCAGTTCTTCGGCTTCCTCATACGACAGCTGGC +
Preference number: 6 (lower is better)
Translates to: GLEAPGQPQGVS*SVLRLPHTTAG
Trigger: GCCAGCTGTCGTATGAGGAAGCCGAAGAACTGATCAAGAGACACCCTGGGGCTGGCCTGGAGCTTCCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp GCAGCTTCTGCTCATGGCCCTGCACAGAGCCGAAGATaGCGGAACAGCTCGGCTTGCCAGTGTGACCCAGGA +
Preference number: 6 (lower is better)
Translates to: AASAHGPAQSRR*RNSSACQCDPG
Trigger: TCCTGGGTCACACTGGCAAGCCGAGCTGTTCCGTCATCTTCGGCTCTGTGCAGGGCCATGAGCAGAAGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp ACCACCCACTGCTCAAAGCTGCCGAAGGCGACAGCCTaGACAAGCACCCCTACCTTGTATTGGGCTGGGGAG +
Preference number: 6 (lower is better)
Translates to: TTHCSKLPKATA*TSTPTLYWAGE
Trigger: CTCCCCAGCCCAATACAAGGTAGGGGTGCTTGTGCAGGCTGTCGCCTTCGGCAGCTTTGAGCAGTGGGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp GAGCCCCTGTGGCCCAATGCCAGCAGGATCAGCCGCTaGAGCACCACATCTAGATACCTACGGATGGGTGAG +
Preference number: 6 (lower is better)
Translates to: EPLWPNASRISR*STTSRYLRMGE
Trigger: CTCACCCATCCGTAGGTATCTAGATGTGGTGCTGCAGCGGCTGATCCTGCTGGCATTGGGCCACAGGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp CAGGCTGTAGGCCCTCCGTTGGTAGCTCTGGGCACTTaGATACTGGCGACTGAAGTCCAGGCAGAGCCCATC +
Preference number: 6 (lower is better)
Translates to: QAVGPPLVALGT*ILATEVQAEPI
Trigger: GATGGGCTCTGCCTGGACTTCAGTCGCCAGTATGCAAGTGCCCAGAGCTACCAACGGAGGGCCTACAGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp GATGCCGCACAGGAGCACGTGCACAGGATGACCGAGTaGCGCTCCAGTTCATGTTTGCGTGCCTTCCCCAAG +
Preference number: 6 (lower is better)
Translates to: DAAQEHVHRMTE*RSSSCLRAFPK
Trigger: CTTGGGGAAGGCACGCAAACATGAACTGGAGCGGCACTCGGTCATCCTGTGCACGTGCTCCTGTGCGGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp AGGCCTAGGGCAGAGATCGAACTTGGAGAGTCCCATTaGTGGGGCACGGTGTTTCCAGGGCACAGCCTGGTC +
Preference number: 6 (lower is better)
Translates to: RPRAEIELGESH*WGTVFPGHSLV
Trigger: GACCAGGCTGTGCCCTGGAAACACCGTGCCCCACCAATGGGACTCTCCAAGTTCGATCTCTGCCCTAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp GTGCTGGATCTTCTCCTGGGCCTGATGCACCGGTGGTaGGTGGCAAGTGACAGACACTCCACGGATGGTCTC +
Preference number: 6 (lower is better)
Translates to: VLDLLLGLMHRW*VASDRHSTDGL
Trigger: GAGACCATCCGTGGAGTGTCTGTCACTTGCCACCCACCACCGGTGCATCAGGCCCAGGAGAAGATCCAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp CTGGTGCTGGATCTTCTCCTGGGCCTGATGCACCGGTaGTGGGTGGCAAGTGACAGACACTCCACGGATGGT +
Preference number: 6 (lower is better)
Translates to: LVLDLLLGLMHR*WVASDRHSTDG
Trigger: ACCATCCGTGGAGTGTCTGTCACTTGCCACCCACCACCGGTGCATCAGGCCCAGGAGAAGATCCAGCACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp TGGGGGTGGCTGGGTGCTGGCTTCCCATTTAGGCCCTaGCTGTGTGTCTGGCCTAGCTGCAACTTCAGCTTC +
Preference number: 6 (lower is better)
Translates to: WGWLGAGFPFRP*LCVWPSCNFSF
Trigger: GAAGCTGAAGTTGCAGCTAGGCCAGACACACAGCCAGGGCCTAAATGGGAAGCCAGCACCCAGCCACCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp CTTGCCGGTGCCAAAGGGGCCATAGATGAGCAGTGGTaGGATGTGCTTTGTGCCCTCGGGTCTTCTGCCTGC +
Preference number: 6 (lower is better)
Translates to: LAGAKGAIDEQW*DVLCALGSSAC
Trigger: GCAGGCAGAAGACCCGAGGGCACAAAGCACATCCCACCACTGCTCATCTATGGCCCCTTTGGCACCGGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp CGTCTTGCCGGTGCCAAAGGGGCCATAGATGAGCAGTaGTGGGATGTGCTTTGTGCCCTCGGGTCTTCTGCC +
Preference number: 6 (lower is better)
Translates to: RLAGAKGAIDEQ*WDVLCALGSSA
Trigger: GGCAGAAGACCCGAGGGCACAAAGCACATCCCACCACTGCTCATCTATGGCCCCTTTGGCACCGGCAAGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp GACAGAGCTCAGTACCACCACCCGGAACTCACGCCCTaGCAGGATCTCAAAGCTGCCCACAGACACCTCACC +
Preference number: 6 (lower is better)
Translates to: DRAQYHHPELTP*QDLKAAHRHLT
Trigger: GGTGAGGTGTCTGTGGGCAGCTTTGAGATCCTGCCAGGGCGTGAGTTCCGGGTGGTGGTACTGAGCTCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp GTGAATGCCATCCCACAGTTCAGACGGCCCCTGACCTaGATAGGGCTAGAGGCCATGTCGTCCAGCGGAGTG +
Preference number: 6 (lower is better)
Translates to: VNAIPQFRRPLT*IGLEAMSSSGV
Trigger: CACTCCGCTGGACGACATGGCCTCTAGCCCTATCCAGGTCAGGGGCCGTCTGAACTGTGGGATGGCATTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp GCTTCAGGGTTGGTGCCAGGAAACCCCGCTGCAGGCTaGAACCAAGCTGAACCTGCAGGGTATCTCCACTGC +
Preference number: 6 (lower is better)
Translates to: ASGLVPGNPAAG*NQAEPAGYLHC
Trigger: GCAGTGGAGATACCCTGCAGGTTCAGCTTGGTTCCAGCCTGCAGCGGGGTTTCCTGGCACCAACCCTGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp ACATTCTCCTGGTCCCAGTCACCACCAGCCAGTTCATaGTCCCAGTCACCAGACAGCCCATGGGCCACCCAG +
Preference number: 6 (lower is better)
Translates to: TFSWSQSPPASS*SQSPDSPWATQ
Trigger: CTGGGTGGCCCATGGGCTGTCTGGTGACTGGGACCATGAACTGGCTGGTGGTGACTGGGACCAGGAGAATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp TGCTTGGGCGCCTCCTGCCGATCATCCACATTCTCCTaGTCCCAGTCACCACCAGCCAGTTCATGGTCCCAG +
Preference number: 6 (lower is better)
Translates to: CLGASCRSSTFS*SQSPPASSWSQ
Trigger: CTGGGACCATGAACTGGCTGGTGGTGACTGGGACCAGGAGAATGTGGATGATCGGCAGGAGGCGCCCAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp GACTCCTGTTGCTCACTCCTGGCAGCGGGAATTCAGTaGCCTCTGCCTGCTCCCCATATACACGCAGGGGCT +
Preference number: 6 (lower is better)
Translates to: DSCCSLLAAGIQ*PLPAPHIHAGA
Trigger: AGCCCCTGCGTGTATATGGGGAGCAGGCAGAGGCCACTGAATTCCCGCTGCCAGGAGTGAGCAACAGGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 72 bp CCCACCTTACGCCAGATCTTGCTCTCTGCTGCTTGCTaGAAGCGGGCCAGCAAGATCTCCCTGGGGCAGGTG +
Preference number: 6 (lower is better)
Translates to: PTLRQILLSAAC*KRASKISLGQV
Trigger: CACCTGCCCCAGGGAGATCTTGCTGGCCCGCTTCAAGCAAGCAGCAGAGAGCAAGATCTGGCGTAAGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 72 bp GAGCTGGATGGCCAGGTGCAGGCTGTAGGCCCTCCGTaGGTAGCTCTGGGCACTTGCATACTGGCGACTGAA +
Preference number: 6 (lower is better)
Translates to: ELDGQVQAVGPP*VALGTCILATE
Trigger: TTCAGTCGCCAGTATGCAAGTGCCCAGAGCTACCAACGGAGGGCCTACAGCCTGCACCTGGCCATCCAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 72 bp CCCCCAGCTGCTCCTCTCCACTCGGGCTGCTGTCAGTaGGCATCTGCTCCTGGTTTGACCTGTGGAACCAGT +
Preference number: 6 (lower is better)
Translates to: PPAAPLHSGCCQ*ASAPGLTCGTS
Trigger: ACTGGTTCCACAGGTCAAACCAGGAGCAGATGCCAACTGACAGCAGCCCGAGTGGAGAGGAGCAGCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 90 bp ATAGGCGTTGGGAAGCTAGGCCTGCGGCCCACCTTACGCCAGATCTaGCTCTCTGCTGCTTGCTTGAAGCGGGCCAGCAAGATCTCCCTG +
Preference number: 6 (lower is better)
Translates to: IGVGKLGLRPTLRQI*LSAACLKRASKISL
Trigger: CAGGGAGATCTTGCTGGCCCGCTTCAAGCAAGCAGCAGAGAGCAAGATCTGGCGTAAGGTGGGCCGCAGGCCTAGCTTCCCAACGCCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 90 bp TGGTCCCAGTCACCAGACAGCCCATGGGCCACCCAGGTATATGTATaGGGGTCAATGTTCAGGAAGGGGCCAAGGCCACTAGGCCCAGGG +
Preference number: 6 (lower is better)
Translates to: WSQSPDSPWATQVYV*GSMFRKGPRPLGPG
Trigger: CCCTGGGCCTAGTGGCCTTGGCCCCTTCCTGAACATTGACCCCAATACATATACCTGGGTGGCCCATGGGCTGTCTGGTGACTGGGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp CCACCTTACGCCAGATCTTGCTCTCTGCTGCTTGCTTaGAGCGGGCCAGCAAGATCTCCCTGGGGCAGGTGT +
Preference number: 6 (lower is better)
Translates to: PPYARSCSLLLA*SGPARSPWGRC
Trigger: ACACCTGCCCCAGGGAGATCTTGCTGGCCCGCTTCAAGCAAGCAGCAGAGAGCAAGATCTGGCGTAAGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp GTGAACACCCACTGGTGCTGGATCTTCTCCTGGGCCTaGTGCACCGGTGGTGGGTGGCAAGTGACAGACACT +
Preference number: 6 (lower is better)
Translates to: VNTHWCWIFSWA*CTGGGWQVTDT
Trigger: AGTGTCTGTCACTTGCCACCCACCACCGGTGCATCAGGCCCAGGAGAAGATCCAGCACCAGTGGGTGTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp CTGGCACCTGGAGCTCACGAGCCTGAGAAGTGGTGGTaGCCACTAAACGGTGATGTACCAGCTCTGGGCCTG +
Preference number: 6 (lower is better)
Translates to: LAPGAHEPEKWW*PLNGDVPALGL
Trigger: CAGGCCCAGAGCTGGTACATCACCGTTTAGTGGTCACCACCACTTCTCAGGCTCGTGAGCTCCAGGTGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp GGCTCTTTGATGCCGCACAGGAGCACGTGCACAGGATaGCCGAGTGCCGCTCCAGTTCATGTTTGCGTGCCT +
Preference number: 6 (lower is better)
Translates to: GSLMPHRSTCTG*PSAAPVHVCVP
Trigger: AGGCACGCAAACATGAACTGGAGCGGCACTCGGTCATCCTGTGCACGTGCTCCTGTGCGGCATCAAAGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp ATGTGGAAGCCCACAACGGTCTTCCCAGTGCCCTTGTaGAAAGAATGCTGGCGAGGCCAGTTGCCGCGGCAG +
Preference number: 6 (lower is better)
Translates to: MWKPTTVFPVPL*KECWRGQLPRQ
Trigger: CTGCCGCGGCAACTGGCCTCGCCAGCATTCTTTTCACAAGGGCACTGGGAAGACCGTTGTGGGCTTCCACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121484.2
CDS GCA 72 bp TCCAGACCAGTGCCTCCTCAGGGCTTCGGGCAAAGGTaGATCTATTCCAGTGACGCCTACAGCCCAACCCTG +
Preference number: 6 (lower is better)
Translates to: SRPVPPQGFGQR*IYSSDAYSPTL
Trigger: CAGGGTTGGGCTGTAGGCGTCACTGGAATAGATGCACCTTTGCCCGAAGCCCTGAGGAGGCACTGGTCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp GGCTGGGGAGCTTTGTACACAGAAGTGCTTTCCCTGTaGATAGAGCTGGTGTGGTGGGAGACTGGGGGCCAC +
Preference number: 6 (lower is better)
Translates to: GWGALYTEVLSL*IELVWWETGGH
Trigger: GTGGCCCCCAGTCTCCCACCACACCAGCTCTATGCACAGGGAAAGCACTTCTGTGTACAAAGCTCCCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp AGCACTGGCCTGCGACCAAAGTCAAAGACCACCCACTaGTCAAAGCTGCCGAAGGCGACAGCCTGCACAAGC +
Preference number: 6 (lower is better)
Translates to: STGLRPKSKTTH*SKLPKATACTS
Trigger: GCTTGTGCAGGCTGTCGCCTTCGGCAGCTTTGAGCAGTGGGTGGTCTTTGACTTTGGTCGCAGGCCAGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp ATAGAGGGCCCCTGGTGGTGCGAAGAGCATGCCGAGTaGTGGTGTCTCCAGTGCTGTCTTCAGGGATACCTG +
Preference number: 6 (lower is better)
Translates to: IEGPWWCEEHAE*WCLQCCLQGYL
Trigger: CAGGTATCCCTGAAGACAGCACTGGAGACACCAGCACTCGGCATGCTCTTCGCACCACCAGGGGCCCTCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp AGGCAGGTCAGGAACCACCAGGTGCTCCTCGAGCAGTaGATCCACTGCCTGATGCCAGAACCGGAAGGTCAT +
Preference number: 6 (lower is better)
Translates to: RQVRNHQVLLEQ*IHCLMPEPEGH
Trigger: ATGACCTTCCGGTTCTGGCATCAGGCAGTGGATGCACTGCTCGAGGAGCACCTGGTGGTTCCTGACCTGCCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp CCATCCTTGGGCACCAAGCTGGCCACATCAGCAATATaGACTGCCACCTCGTACACTGGGCCTAGGTCTCGG +
Preference number: 6 (lower is better)
Translates to: PSLGTKLATSAI*TATSYTGPRSR
Trigger: CCGAGACCTAGGCCCAGTGTACGAGGTGGCAGTGCATATTGCTGATGTGGCCAGCTTGGTGCCCAAGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp GTTGCTCACTCCTGGCAGCGGGAATTCAGTGGCCTCTaGCTGCTCCCCATATACACGCAGGGGCTTCATCTC +
Preference number: 6 (lower is better)
Translates to: VAHSWQREFSGL*LLPIYTQGLHL
Trigger: GAGATGAAGCCCCTGCGTGTATATGGGGAGCAGGCAGAGGCCACTGAATTCCCGCTGCCAGGAGTGAGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp TGGTGTCAGCTGGGGTCTGCAGCCTATCTGGGGCTCTaGTGCCCTGCACAGCCTCTTTCAGTTTCAATCGGG +
Preference number: 6 (lower is better)
Translates to: WCQLGSAAYLGL*CPAQPLSVSIG
Trigger: CCCGATTGAAACTGAAAGAGGCTGTGCAGGGCACCAGAGCCCCAGATAGGCTGCAGACCCCAGCTGACACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp CTTCCACGTCCAGGGCCCCATCCTTGGGCACCAAGCTaGCCACATCAGCAATATGCACTGCCACCTCGTACA +
Preference number: 6 (lower is better)
Translates to: LPRPGPHPWAPS*PHQQYALPPRT
Trigger: TGTACGAGGTGGCAGTGCATATTGCTGATGTGGCCAGCTTGGTGCCCAAGGATGGGGCCCTGGACGTGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp GCGAGTGGTGAACAGCAGGTTGCTGCTTACCCTGGCTaGAGCGACCAAAAACAGAGCGGCCTAGAGCCCTTC +
Preference number: 6 (lower is better)
Translates to: ASGEQQVAAYPG*SDQKQSGLEPF
Trigger: GAAGGGCTCTAGGCCGCTCTGTTTTTGGTCGCTCCAGCCAGGGTAAGCAGCAACCTGCTGTTCACCACTCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp GCAGCTTCCAGCTGGAAGGTGCCCTGCAACTGCCCCTaGGATGTGTCCCAAGAGATATGCACATCGTGCAGC +
Preference number: 6 (lower is better)
Translates to: AASSWKVPCNCP*DVSQEICTSCS
Trigger: GCTGCACGATGTGCATATCTCTTGGGACACATCCCAGGGGCAGTTGCAGGGCACCTTCCAGCTGGAAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp GCCTCCTGGGCCCGGGTGATGGCCACGTTTACTTGGTaGGGGTCCACAACAAAGCCCAGAAACTTCTTGAGC +
Preference number: 6 (lower is better)
Translates to: ASWARVMATFTW*GSTTKPRNFLS
Trigger: GCTCAAGAAGTTTCTGGGCTTTGTTGTGGACCCCCACCAAGTAAACGTGGCCATCACCCGGGCCCAGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 72 bp TCTGCAGCACTGTTGGTGTGTGTGCAGATGAGCACCTaGGTGTGGGGCTGCTGGACAACCTCAAGTGCGGCC +
Preference number: 6 (lower is better)
Translates to: SAALLVCVQMST*VWGCWTTSSAA
Trigger: GGCCGCACTTGAGGTTGTCCAGCAGCCCCACACCAAGGTGCTCATCTGCACACACACCAACAGTGCTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 72 bp CTTGAGGGTCTCATGCCTCACACGCTGCACCTGGCCTaGAATGAGGCGGTGGATGGGAACTTGCTGTGGGTC +
Preference number: 6 (lower is better)
Translates to: LEGLMPHTLHLA*NEAVDGNLLWV
Trigger: GACCCACAGCAAGTTCCCATCCACCGCCTCATTCAAGGCCAGGTGCAGCGTGTGAGGCATGAGACCCTCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 72 bp TGGGCTGGAAGCTCCAGGCCAGCCCCAGGGTGTCTCTaGATCAGTTCTTCGGCTTCCTCATACGACAGCTGG +
Preference number: 6 (lower is better)
Translates to: WAGSSRPAPGCL*ISSSASSYDSW
Trigger: CCAGCTGTCGTATGAGGAAGCCGAAGAACTGATCAAGAGACACCCTGGGGCTGGCCTGGAGCTTCCAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 72 bp TCGTGCAGCACAATGGAGTCGTTTTCTGTAACAGCATaGGTGAGCGACTCCAGGGCGCAGCGTGGCCCCCAG +
Preference number: 6 (lower is better)
Translates to: SCSTMESFSVTA*VSDSRAQRGPQ
Trigger: CTGGGGGCCACGCTGCGCCCTGGAGTCGCTCACCAATGCTGTTACAGAAAACGACTCCATTGTGCTGCACGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 90 bp CTGCTCAGGGCTTCCTGCCACATGGCAGAACATGAGAGGGTAGTGTaGGGGGTGACGTGGGACTTTGCCACTGGCCTGGATGGGATTACC +
Preference number: 6 (lower is better)
Translates to: LLRASCHMAEHERVV*GVTWDFATGLDGIT
Trigger: GGTAATCCCATCCAGGCCAGTGGCAAAGTCCCACGTCACCCCCAACACTACCCTCTCATGTTCTGCCATGTGGCAGGAAGCCCTGAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 90 bp GGGCCCTGGGCCATAGATTTTTGCTCTGTCTCTGGGCCCCTAGCTTaGAGTGTCAATGAGGCCCAGTTCTGTCTCTGGGCCACACCCTGC +
Preference number: 6 (lower is better)
Translates to: GPWAIDFCSVSGPLA*SVNEAQFCLWATPC
Trigger: GCAGGGTGTGGCCCAGAGACAGAACTGGGCCTCATTGACACTCAAAGCTAGGGGCCCAGAGACAGAGCAAAAATCTATGGCCCAGGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 90 bp GGGCAGGGATCGGGCAGCGTTTCCCGGTTTATAGGGAAAAGCACTTaGAAGCAGCGGGCACCCATCTCGACATCCACTACGAAGCCCAGC +
Preference number: 6 (lower is better)
Translates to: GQGSGSVSRFIGKST*KQRAPISTSTTKPS
Trigger: GCTGGGCTTCGTAGTGGATGTCGAGATGGGTGCCCGCTGCTTCAAAGTGCTTTTCCCTATAAACCGGGAAACGCTGCCCGATCCCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 90 bp GGTCTCTGCCTTCACCGTGACCATGGTCCCTTCAGCTATGAGCCTTaGTGGGCCCTGGGCCATAGATTTTTGCTCTGTCTCTGGGCCCCT +
Preference number: 6 (lower is better)
Translates to: GLCLHRDHGPFSYEP*WALGHRFLLCLWAP
Trigger: AGGGGCCCAGAGACAGAGCAAAAATCTATGGCCCAGGGCCCACAAAGGCTCATAGCTGAAGGGACCATGGTCACGGTGAAGGCAGAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 90 bp ATCCTCAGGCTTGAGGGTCTCATGCCTCACACGCTGCACCTGGCCTaGAATGAGGCGGTGGATGGGAACTTGCTGTGGGTCCTTCATCTC +
Preference number: 6 (lower is better)
Translates to: ILRLEGLMPHTLHLA*NEAVDGNLLWVLHL
Trigger: GAGATGAAGGACCCACAGCAAGTTCCCATCCACCGCCTCATTCAAGGCCAGGTGCAGCGTGTGAGGCATGAGACCCTCAAGCCTGAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 90 bp CGCCGACTTGAAGGTACTGGTCTTGCAGAGCCTGGTGCACATGGCTaGAAAAGCAGTCACCTGGCCGTTCCATGTGCTCCAGACAGAGGC +
Preference number: 6 (lower is better)
Translates to: RRLEGTGLAEPGAHG*KSSHLAVPCAPDRG
Trigger: GCCTCTGTCTGGAGCACATGGAACGGCCAGGTGACTGCTTTTCAAGCCATGTGCACCAGGCTCTGCAAGACCAGTACCTTCAAGTCGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 90 bp ATATGCACATCGTGCAGCACAATGGAGTCGTTTTCTGTAACAGCATaGGTGAGCGACTCCAGGGCGCAGCGTGGCCCCCAGGCACCTGAG +
Preference number: 6 (lower is better)
Translates to: ICTSCSTMESFSVTA*VSDSRAQRGPQAPE
Trigger: CTCAGGTGCCTGGGGGCCACGCTGCGCCCTGGAGTCGCTCACCAATGCTGTTACAGAAAACGACTCCATTGTGCTGCACGATGTGCATAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp ATGTGTACGTCTTGCCGGTGCCAAAGGGGCCATAGATaGGCAGTGGTGGGATGTGCTTTGTGCCCTCGGGTC +
Preference number: 6 (lower is better)
Translates to: MCTSCRCQRGHR*AVVGCALCPRV
Trigger: GACCCGAGGGCACAAAGCACATCCCACCACTGCTCATCTATGGCCCCTTTGGCACCGGCAAGACGTACACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp GGGCCTCACACTCCAGCATTTGGGCTGCCTCATCGATaGAAATGTGGGAGAAGAAGCCCGCTGGCACCTGGA +
Preference number: 6 (lower is better)
Translates to: GPHTPAFGLPHR*KCGRRSPLAPG
Trigger: TCCAGGTGCCAGCGGGCTTCTTCTCCCACATTTTCATCGATGAGGCAGCCCAAATGCTGGAGTGTGAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp TTGCTCTGTCTCTGGGCCCCTAGCTTTGAGTGTCAATaGGGCCCAGTTCTGTCTCTGGGCCACACCCTGCTC +
Preference number: 6 (lower is better)
Translates to: LLCLWAPSFECQ*GPVLSLGHTLL
Trigger: GAGCAGGGTGTGGCCCAGAGACAGAACTGGGCCTCATTGACACTCAAAGCTAGGGGCCCAGAGACAGAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp CCCATCTCGACATCCACTACGAAGCCCAGCTTGTTTTaGGGCTGGCTCTTGAGCTGGATGGCCAGGTGCAGG +
Preference number: 6 (lower is better)
Translates to: PISTSTTKPSLF*GWLLSWMARCR
Trigger: CCTGCACCTGGCCATCCAGCTCAAGAGCCAGCCTCAAAACAAGCTGGGCTTCGTAGTGGATGTCGAGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp TTCTGCCGCTCCAAGAACCTGCTGGTAGATGCCTTGTaGAAAGAATGCTGGCGAGGCCAGTTGCCGCGGCAG +
Preference number: 6 (lower is better)
Translates to: FCRSKNLLVDAL*KECWRGQLPRQ
Trigger: CTGCCGCGGCAACTGGCCTCGCCAGCATTCTTTTCACAAGGCATCTACCAGCAGGTTCTTGGAGCGGCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
CDS GCA 72 bp TGGAACTGCACCTCCAAGATGGGGCTGTCTTGGGCCTaGAGCCCCAAAGCCATACAGCATCGTGCTGGTAAC +
Preference number: 6 (lower is better)
Translates to: WNCTSKMGLSWA*SPKAIQHRAGN
Trigger: GTTACCAGCACGATGCTGTATGGCTTTGGGGCTGCAGGCCCAAGACAGCCCCATCTTGGAGGTGCAGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp TTGGTGTGTGTGCAGATGAGCACCTTGGTGTGGGGCTaGTGGACAACCTCAAGTGCGGCCATGGCCAATGTG +
Preference number: 6 (lower is better)
Translates to: LVCVQMSTLVWG*WTTSSAAMANV
Trigger: CACATTGGCCATGGCCGCACTTGAGGTTGTCCAGCAGCCCCACACCAAGGTGCTCATCTGCACACACACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp CCACCCGGAACTCACGCCCTGGCAGGATCTCAAAGCTaGCCACAGACACCTCACCAAGGTTCCTCCTTCTTA +
Preference number: 6 (lower is better)
Translates to: PPGTHALAGSQS*PQTPHQGSSFL
Trigger: TAAGAAGGAGGAACCTTGGTGAGGTGTCTGTGGGCAGCTTTGAGATCCTGCCAGGGCGTGAGTTCCGGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp CCTAGGGCAGAGATCGAACTTGGAGAGTCCCATTGGTaGGGCACGGTGTTTCCAGGGCACAGCCTGGTCAAA +
Preference number: 6 (lower is better)
Translates to: PRAEIELGESHW*GTVFPGHSLVK
Trigger: TTTGACCAGGCTGTGCCCTGGAAACACCGTGCCCCACCAATGGGACTCTCCAAGTTCGATCTCTGCCCTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp AGTGCTGGTGTCTCCAGTGCTGTCTTCAGGGATACCTaGCCCTTCATGGCCAGCTTGGCTACTAGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: SAGVSSAVFRDT*PFMASLATSCC
Trigger: GCAGCAGCTAGTAGCCAAGCTGGCCATGAAGGGCCAGGTATCCCTGAAGACAGCACTGGAGACACCAGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp GTGTGTGTGCAGATGAGCACCTTGGTGTGGGGCTGCTaGACAACCTCAAGTGCGGCCATGGCCAATGTGTAC +
Preference number: 6 (lower is better)
Translates to: VCVQMSTLVWGC*TTSSAAMANVY
Trigger: GTACACATTGGCCATGGCCGCACTTGAGGTTGTCCAGCAGCCCCACACCAAGGTGCTCATCTGCACACACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp TGCATCCTGGCACAAGCTGGCGGGCAGCATGAGTACTaGCTCCCTATTGGGGGCATAGAACACAGTTCCCTG +
Preference number: 6 (lower is better)
Translates to: CILAQAGGQHEY*LPIGGIEHSSL
Trigger: CAGGGAACTGTGTTCTATGCCCCCAATAGGGAGCCAGTACTCATGCTGCCCGCCAGCTTGTGCCAGGATGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp GGGGTGCTCAGCCAACTGCAGGGAATGGTAGTGAATTaGGCAGGGATCGGGCAGCGTTTCCCGGTTTATAGG +
Preference number: 6 (lower is better)
Translates to: GVLSQLQGMVVN*AGIGQRFPVYR
Trigger: CCTATAAACCGGGAAACGCTGCCCGATCCCTGCCCAATTCACTACCATTCCCTGCAGTTGGCTGAGCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp AACGCCTCCTGGGCCCGGGTGATGGCCACGTTTACTTaGTGGGGGTCCACAACAAAGCCCAGAAACTTCTTG +
Preference number: 6 (lower is better)
Translates to: NASWARVMATFT*WGSTTKPRNFL
Trigger: CAAGAAGTTTCTGGGCTTTGTTGTGGACCCCCACCAAGTAAACGTGGCCATCACCCGGGCCCAGGAGGCGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 72 bp CTGCCGAAGGCGACAGCCTGCACAAGCACCCCTACCTaGTATTGGGCTGGGGAGCTTTGTACACAGAAGTGC +
Preference number: 6 (lower is better)
Translates to: LPKATACTSTPT*YWAGELCTQKC
Trigger: GCACTTCTGTGTACAAAGCTCCCCAGCCCAATACAAGGTAGGGGTGCTTGTGCAGGCTGTCGCCTTCGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 72 bp GCTTCCTGCCACATGGCAGAACATGAGAGGGTAGTGTaGGGGGTGACGTGGGACTTTGCCACTGGCCTGGAT +
Preference number: 6 (lower is better)
Translates to: ASCHMAEHERVV*GVTWDFATGLD
Trigger: ATCCAGGCCAGTGGCAAAGTCCCACGTCACCCCCAACACTACCCTCTCATGTTCTGCCATGTGGCAGGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 72 bp GAGGTTGGTGCCCCTGGGCTAAGCAGACTATTGCGGTaGTGGACAGAGCTCAGTACCACCACCCGGAACTCA +
Preference number: 6 (lower is better)
Translates to: EVGAPGLSRLLR*WTELSTTTRNS
Trigger: TGAGTTCCGGGTGGTGGTACTGAGCTCTGTCCACAACCGCAATAGTCTGCTTAGCCCAGGGGCACCAACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 72 bp AACTCTGAGGTTGGTGCCCCTGGGCTAAGCAGACTATaGCGGTTGTGGACAGAGCTCAGTACCACCACCCGG +
Preference number: 6 (lower is better)
Translates to: NSEVGAPGLSRL*RLWTELSTTTR
Trigger: CCGGGTGGTGGTACTGAGCTCTGTCCACAACCGCAATAGTCTGCTTAGCCCAGGGGCACCAACCTCAGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 72 bp GACCGATCCATCCCCAGACTCTGCAGCTGTTCACTCTaGACCACAGGCCGAAGCTGCTTGTGGTCTCCAAGC +
Preference number: 6 (lower is better)
Translates to: DRSIPRLCSCSL*TTGRSCLWSPS
Trigger: GCTTGGAGACCACAAGCAGCTTCGGCCTGTGGTCAAGAGTGAACAGCTGCAGAGTCTGGGGATGGATCGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 72 bp CAACGCCTCCTGGGCCCGGGTGATGGCCACGTTTACTaGGTGGGGGTCCACAACAAAGCCCAGAAACTTCTT +
Preference number: 6 (lower is better)
Translates to: QRLLGPGDGHVY*VGVHNKAQKLL
Trigger: AAGAAGTTTCTGGGCTTTGTTGTGGACCCCCACCAAGTAAACGTGGCCATCACCCGGGCCCAGGAGGCGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 90 bp TCAGTGAAGAACTCTGAGGTTGGTGCCCCTGGGCTAAGCAGACTATaGCGGTTGTGGACAGAGCTCAGTACCACCACCCGGAACTCACGC +
Preference number: 6 (lower is better)
Translates to: SVKNSEVGAPGLSRL*RLWTELSTTTRNSR
Trigger: GCGTGAGTTCCGGGTGGTGGTACTGAGCTCTGTCCACAACCGCAATAGTCTGCTTAGCCCAGGGGCACCAACCTCAGAGTTCTTCACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 90 bp GCTCCTCTCCACTCGGGCTGCTGTCAGTTGGCATCTGCTCCTGGTTaGACCTGTGGAACCAGTACACAATGTGGAAGCCCACAACGGTCT +
Preference number: 6 (lower is better)
Translates to: APLHSGCCQLASAPG*TCGTSTQCGSPQRS
Trigger: AGACCGTTGTGGGCTTCCACATTGTGTACTGGTTCCACAGGTCAAACCAGGAGCAGATGCCAACTGACAGCAGCCCGAGTGGAGAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 90 bp GCCACGTTTACTTGGTGGGGGTCCACAACAAAGCCCAGAAACTTCTaGAGCCAGCTCTTTGTTGGCCGCTGGTCCACATCACTCCTGGGG +
Preference number: 6 (lower is better)
Translates to: ATFTWWGSTTKPRNF*SQLFVGRWSTSLLG
Trigger: CCCCAGGAGTGATGTGGACCAGCGGCCAACAAAGAGCTGGCTCAAGAAGTTTCTGGGCTTTGTTGTGGACCCCCACCAAGTAAACGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 90 bp AATGATGCACAACGCCTCCTGGGCCCGGGTGATGGCCACGTTTACTaGGTGGGGGTCCACAACAAAGCCCAGAAACTTCTTGAGCCAGCT +
Preference number: 6 (lower is better)
Translates to: NDAQRLLGPGDGHVY*VGVHNKAQKLLEPA
Trigger: AGCTGGCTCAAGAAGTTTCTGGGCTTTGTTGTGGACCCCCACCAAGTAAACGTGGCCATCACCCGGGCCCAGGAGGCGTTGTGCATCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp CAGGGAAGGCGCTGTGGTGTTCTATGCACTCGCGGATaGAGCTTCTCCAGAGATTTCTGCAGGCTCCAGAGG +
Preference number: 6 (lower is better)
Translates to: QGRRCGVLCTRG*SFSRDFCRLQR
Trigger: CCTCTGGAGCCTGCAGAAATCTCTGGAGAAGCTTCATCCGCGAGTGCATAGAACACCACAGCGCCTTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp CTGTCTCTGGGCCACACCCTGCTCAATCTGTTCCAGTaGCAGCTCCTCAGGGAAGGCGCTGTGGTGTTCTAT +
Preference number: 6 (lower is better)
Translates to: LSLGHTLLNLFQ*QLLREGAVVFY
Trigger: ATAGAACACCACAGCGCCTTCCCTGAGGAGCTGTCACTGGAACAGATTGAGCAGGGTGTGGCCCAGAGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp TTCCCATTTAGGCCCTGGCTGTGTGTCTGGCCTAGCTaGAACTTCAGCTTCTGGAGAAGCACTGGCCTGCGA +
Preference number: 6 (lower is better)
Translates to: FPFRPWLCVWPS*NFSFWRSTGLR
Trigger: TCGCAGGCCAGTGCTTCTCCAGAAGCTGAAGTTGCAGCTAGGCCAGACACACAGCCAGGGCCTAAATGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp AGGGAGGGTAACTTGTACTTGGCCATCAGGGCTTCCTaGTCGGGTGTCCAATCTACCTCAAGCACCACGTGG +
Preference number: 6 (lower is better)
Translates to: REGNLYLAIRAS*SGVQSTSSTTW
Trigger: CCACGTGGTGCTTGAGGTAGATTGGACACCCGAGCAGGAAGCCCTGATGGCCAAGTACAAGTTACCCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp AGGAACCACCAGGTGCTCCTCGAGCAGTGCATCCACTaGCTGATGCCAGAACCGGAAGGTCATAGGGTCAAT +
Preference number: 6 (lower is better)
Translates to: RNHQVLLEQCIH*LMPEPEGHRVN
Trigger: ATTGACCCTATGACCTTCCGGTTCTGGCATCAGGCAGTGGATGCACTGCTCGAGGAGCACCTGGTGGTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp CGAAAGGCCTGGCGGTCCTCAGTTAGGCAGCAGTACTaGAACGTGGTTGGATCAGTCTGTCTTGGAGGACGA +
Preference number: 6 (lower is better)
Translates to: RKAWRSSVRQQY*NVVGSVCLGGR
Trigger: TCGTCCTCCAAGACAGACTGATCCAACCACGTTGCAGTACTGCTGCCTAACTGAGGACCGCCAGGCCTTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp GTCAATGAGGCCCAGTTCTGTCTCTGGGCCACACCCTaGTCAATCTGTTCCAGTGACAGCTCCTCAGGGAAG +
Preference number: 6 (lower is better)
Translates to: VNEAQFCLWATP*SICSSDSSSGK
Trigger: CTTCCCTGAGGAGCTGTCACTGGAACAGATTGAGCAGGGTGTGGCCCAGAGACAGAACTGGGCCTCATTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp GGCTGGAACCAAGCTGAACCTGCAGGGTATCTCCACTaGCCAGCTCGTAGACCACCTCTACAAAGTGTCCAC +
Preference number: 6 (lower is better)
Translates to: GWNQAEPAGYLH*PARRPPLQSVH
Trigger: GTGGACACTTTGTAGAGGTGGTCTACGAGCTGGGCAGTGGAGATACCCTGCAGGTTCAGCTTGGTTCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp TCCTGGAGAAAAGCAGCTTCCAGCTGGAAGGTGCCCTaGAACTGCCCCTGGGATGTGTCCCAAGAGATATGC +
Preference number: 6 (lower is better)
Translates to: SWRKAASSWKVP*NCPWDVSQEIC
Trigger: GCATATCTCTTGGGACACATCCCAGGGGCAGTTGCAGGGCACCTTCCAGCTGGAAGCTGCTTTTCTCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp CAGCACGTGAAGCAGATGGCACAGAGTAGTTGGAAGTaGCCACCAAACTCTGCTCGGATGGTGTCAGCTGGG +
Preference number: 6 (lower is better)
Translates to: QHVKQMAQSSWK*PPNSARMVSAG
Trigger: CCCAGCTGACACCATCCGAGCAGAGTTTGGTGGCCACTTCCAACTACTCTGTGCCATCTGCTTCACGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp GGGGGACAGCACGTGAAGCAGATGGCACAGAGTAGTTaGAAGTGGCCACCAAACTCTGCTCGGATGGTGTCA +
Preference number: 6 (lower is better)
Translates to: GGQHVKQMAQSS*KWPPNSARMVS
Trigger: TGACACCATCCGAGCAGAGTTTGGTGGCCACTTCCAACTACTCTGTGCCATCTGCTTCACGTGCTGTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp GGTGCTGGCTTCCCATTTAGGCCCTGGCTGTGTGTCTaGCCTAGCTGCAACTTCAGCTTCTGGAGAAGCACT +
Preference number: 6 (lower is better)
Translates to: GAGFPFRPWLCV*PSCNFSFWRST
Trigger: AGTGCTTCTCCAGAAGCTGAAGTTGCAGCTAGGCCAGACACACAGCCAGGGCCTAAATGGGAAGCCAGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp TCAATCTGGAACTGCACCTCCAAGATGGGGCTGTCTTaGGCCTGCAGCCCCAAAGCCATACAGCATCGTGCT +
Preference number: 6 (lower is better)
Translates to: SIWNCTSKMGLS*ACSPKAIQHRA
Trigger: AGCACGATGCTGTATGGCTTTGGGGCTGCAGGCCCAAGACAGCCCCATCTTGGAGGTGCAGTTCCAGATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp CTAGGCACGCTGAAGAGCCTAGGTGTGACCTGCATGTaGTCCCCTGCCAGTACTACACGGGTTAGTGACAAG +
Preference number: 6 (lower is better)
Translates to: LGTLKSLGVTCM*SPASTTRVSDK
Trigger: CTTGTCACTAACCCGTGTAGTACTGGCAGGGGACCACATGCAGGTCACACCTAGGCTCTTCAGCGTGCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp CCGTGTTTAGCTCTGAGCGGTATCTCTGCAGAGCCTTaGAAACTGAGGCTGGGTCTGGTGTGTGGGCCTTCA +
Preference number: 6 (lower is better)
Translates to: PCLALSGISAEP*KLRLGLVCGPS
Trigger: TGAAGGCCCACACACCAGACCCAGCCTCAGTTTCCAAGGCTCTGCAGAGATACCGCTCAGAGCTAAACACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp CCATCAATGTCCCTGTTAGAATATGTAGAGCCCCTGTaGCCCAATGCCAGCAGGATCAGCCGCTGCAGCACC +
Preference number: 6 (lower is better)
Translates to: PSMSLLEYVEPL*PNASRISRCST
Trigger: GGTGCTGCAGCGGCTGATCCTGCTGGCATTGGGCCACAGGGGCTCTACATATTCTAACAGGGACATTGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp CACAATGTGGAAGCCCACAACGGTCTTCCCAGTGCCTaGTGGGCCCTGGATGACTGTGAACTGTTTCTGCAG +
Preference number: 6 (lower is better)
Translates to: HNVEAHNGLPSA*WALDDCELFLQ
Trigger: CTGCAGAAACAGTTCACAGTCATCCAGGGCCCACCAGGCACTGGGAAGACCGTTGTGGGCTTCCACATTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
CDS CCA 72 bp TGCTCCTGGTTTGACCTGTGGAACCAGTACACAATGTaGAAGCCCACAACGGTCTTCCCAGTGCCTGGTGGG +
Preference number: 6 (lower is better)
Translates to: CSWFDLWNQYTM*KPTTVFPVPGG
Trigger: CCCACCAGGCACTGGGAAGACCGTTGTGGGCTTCCACATTGTGTACTGGTTCCACAGGTCAAACCAGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
CDS CCA 72 bp GCCAGCTCTTTGTTGGCCGCTGGTCCACATCACTCCTaGGGCATGTTCGGACGGTACTCACTATCACATAGC +
Preference number: 6 (lower is better)
Translates to: ASSLLAAGPHHS*GMFGRYSLSHS
Trigger: GCTATGTGATAGTGAGTACCGTCCGAACATGCCCCAGGAGTGATGTGGACCAGCGGCCAACAAAGAGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp CCCAGAAACTTCTTGAGCCAGCTCTTTGTTGGCCGCTaGTCCACATCACTCCTGGGGCATGTTCGGACGGTA +
Preference number: 6 (lower is better)
Translates to: PRNFLSQLFVGR*STSLLGHVRTV
Trigger: TACCGTCCGAACATGCCCCAGGAGTGATGTGGACCAGCGGCCAACAAAGAGCTGGCTCAAGAAGTTTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 72 bp ACCCATCTCGACATCCACTACGAAGCCCAGCTTGTTTaGAGGCTGGCTCTTGAGCTGGATGGCCAGGTGCAG +
Preference number: 6 (lower is better)
Translates to: THLDIHYEAQLV*RLALELDGQVQ
Trigger: CTGCACCTGGCCATCCAGCTCAAGAGCCAGCCTCAAAACAAGCTGGGCTTCGTAGTGGATGTCGAGATGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 90 bp GTGCCCTGCACAGCCTCTTTCAGTTTCAATCGGGGAAGGTTGTTCTaGAGCTCAAATGTCCAGACCAGTGCCTCCTCAGGGCTTCGGGCA +
Preference number: 6 (lower is better)
Translates to: VPCTASFSFNRGRLF*SSNVQTSASSGLRA
Trigger: TGCCCGAAGCCCTGAGGAGGCACTGGTCTGGACATTTGAGCTCAAGAACAACCTTCCCCGATTGAAACTGAAAGAGGCTGTGCAGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 90 bp TGCTCAAAGCTGCCGAAGGCGACAGCCTGCACAAGCACCCCTACCTaGTATTGGGCTGGGGAGCTTTGTACACAGAAGTGCTTTCCCTGT +
Preference number: 6 (lower is better)
Translates to: CSKLPKATACTSTPT*YWAGELCTQKCFPC
Trigger: ACAGGGAAAGCACTTCTGTGTACAAAGCTCCCCAGCCCAATACAAGGTAGGGGTGCTTGTGCAGGCTGTCGCCTTCGGCAGCTTTGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 90 bp AGCTGGCGGTCAGAGCGGATTATGGAGGGTGCAAATCGCAGGCTCTaGATCTGGCCACCACCTTTCTCCATGGTGAGGAAGAGAGAGATG +
Preference number: 6 (lower is better)
Translates to: SWRSERIMEGANRRL*IWPPPFSMVRKREM
Trigger: CATCTCTCTCTTCCTCACCATGGAGAAAGGTGGTGGCCAGATCAAGAGCCTGCGATTTGCACCCTCCATAATCCGCTCTGACCGCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 90 bp TCAAAGAGAGACCGATCCATCCCCAGACTCTGCAGCTGTTCACTCTaGACCACAGGCCGAAGCTGCTTGTGGTCTCCAAGCAGAACCACC +
Preference number: 6 (lower is better)
Translates to: SKRDRSIPRLCSCSL*TTGRSCLWSPSRTT
Trigger: GGTGGTTCTGCTTGGAGACCACAAGCAGCTTCGGCCTGTGGTCAAGAGTGAACAGCTGCAGAGTCTGGGGATGGATCGGTCTCTCTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 90 bp GTCAACTGCTTTATGATGCGGACCACCTGTGTGACTTCCTCTGGGTaGGCCCTAGAGTTCTCATTGCCATCCTCGGTGGACACCAGCAGC +
Preference number: 6 (lower is better)
Translates to: VNCFMMRTTCVTSSG*ALEFSLPSSVDTSS
Trigger: GCTGCTGGTGTCCACCGAGGATGGCAATGAGAACTCTAGGGCCAACCCAGAGGAAGTCACACAGGTGGTCCGCATCATAAAGCAGTTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp TGTGCTCTACCTCACGCAGAATGTAGGTACTCTCATTaGGGCACTGGGTGCAGCGGGAGCAGCCCAGGTAAA +
Preference number: 6 (lower is better)
Translates to: CALPHAECRYSH*GTGCSGSSPGK
Trigger: TTTACCTGGGCTGCTCCCGCTGCACCCAGTGCCTCAATGAGAGTACCTACATTCTGCGTGAGGTAGAGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp GGGCCACCAGTGAGAAAGCTGCTCCAGGCTCTTGATTaGGTAGGGCCACATGTAGCAAGGGATCCTCAGAGT +
Preference number: 6 (lower is better)
Translates to: GPPVRKLLQALD*VGPHVARDPQS
Trigger: ACTCTGAGGATCCCTTGCTACATGTGGCCCTACTCAATCAAGAGCCTGGAGCAGCTTTCTCACTGGTGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp TTCGAACGAGAGATGGGCCCCCAGTCCGGAACAATCTaGTTGAACTCCAGGGCCAGGGAGGGTAACTTGTAC +
Preference number: 6 (lower is better)
Translates to: FEREMGPQSGTI*LNSRAREGNLY
Trigger: GTACAAGTTACCCTCCCTGGCCCTGGAGTTCAATCAGATTGTTCCGGACTGGGGGCCCATCTCTCGTTCGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp CGTCGAGAAGTTCCTTCAGGATGGCGTCATCAGCATTaGGCTCCCAGTCAGAGGGCCAGAAGTCAGACTCAG +
Preference number: 6 (lower is better)
Translates to: RREVPSGWRHQH*APSQRARSQTQ
Trigger: CTGAGTCTGACTTCTGGCCCTCTGACTGGGAGCTCAATGCTGATGACGCCATCCTGAAGGAACTTCTCGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp AAGGTACTGGTCTTGCAGAGCCTGGTGCACATGGCTTaGAAAGCAGTCACCTGGCCGTTCCATGTGCTCCAG +
Preference number: 6 (lower is better)
Translates to: KVLVLQSLVHMA*KAVTWPFHVLQ
Trigger: CTGGAGCACATGGAACGGCCAGGTGACTGCTTTTCAAGCCATGTGCACCAGGCTCTGCAAGACCAGTACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp ACTCGGGCTGCTGTCAGTTGGCATCTGCTCCTGGTTTaGCCTGTGGAACCAGTACACAATGTGGAAGCCCAC +
Preference number: 6 (lower is better)
Translates to: TRAAVSWHLLLV*PVEPVHNVEAH
Trigger: GTGGGCTTCCACATTGTGTACTGGTTCCACAGGTCAAACCAGGAGCAGATGCCAACTGACAGCAGCCCGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp CTTGGTGGGGGTCCACAACAAAGCCCAGAAACTTCTTaGGCCAGCTCTTTGTTGGCCGCTGGTCCACATCAC +
Preference number: 6 (lower is better)
Translates to: LGGGPQQSPETS*ASSLLAAGPHH
Trigger: GTGATGTGGACCAGCGGCCAACAAAGAGCTGGCTCAAGAAGTTTCTGGGCTTTGTTGTGGACCCCCACCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp GAGTGGGATAAGGGCCTCACACTCCAGCATTTGGGCTaGCTCATCGATGAAAATGTGGGAGAAGAAGCCCGC +
Preference number: 6 (lower is better)
Translates to: EWDKGLTLQHLG*LIDENVGEEAR
Trigger: GCGGGCTTCTTCTCCCACATTTTCATCGATGAGGCAGCCCAAATGCTGGAGTGTGAGGCCCTTATCCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp ATGGAAGATGATGCGACTCTGCTGAGCGATCTTGTGTaGCTCCTGCTGGTAGTACAGGAAGAGGCGGTGCAG +
Preference number: 6 (lower is better)
Translates to: MEDDATLLSDLV*LLLVVQEEAVQ
Trigger: CTGCACCGCCTCTTCCTGTACTACCAGCAGGAGGCACACAAGATCGCTCAGCAGAGTCGCATCATCTTCCAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp AGGCCTCTGTACTTCTTGAAAACACTGTCAAGCTGCTaGCTACTGGGTGTGGGCTGCCACCTGAGTGGTGTG +
Preference number: 6 (lower is better)
Translates to: RPLYFLKTLSSC*LLGVGCHLSGV
Trigger: CACACCACTCAGGTGGCAGCCCACACCCAGTAGGCAGCAGCTTGACAGTGTTTTCAAGAAGTACAGAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp ACCAGGCCTCTGTACTTCTTGAAAACACTGTCAAGCTaGTGCCTACTGGGTGTGGGCTGCCACCTGAGTGGT +
Preference number: 6 (lower is better)
Translates to: TRPLYFLKTLSS*CLLGVGCHLSG
Trigger: ACCACTCAGGTGGCAGCCCACACCCAGTAGGCAGCAGCTTGACAGTGTTTTCAAGAAGTACAGAGGCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp CTTCGCAAGTCCAGGCAAGCAGGAGCCAGTGAAGGGTaGATGTCATCTGCAGCAATAAGGTCCACCATCTGG +
Preference number: 6 (lower is better)
Translates to: LRKSRQAGASEG*MSSAAIRSTIW
Trigger: CCAGATGGTGGACCTTATTGCTGCAGATGACATGCACCCTTCACTGGCTCCTGCTTGCCTGGACTTGCGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp ATTTCTCCTGGAGAAAAGCAGCTTCCAGCTGGAAGGTaGCCTGCAACTGCCCCTGGGATGTGTCCCAAGAGA +
Preference number: 6 (lower is better)
Translates to: ISPGEKQLPAGR*PATAPGMCPKR
Trigger: TCTCTTGGGACACATCCCAGGGGCAGTTGCAGGGCACCTTCCAGCTGGAAGCTGCTTTTCTCCAGGAGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp CTCTGCAGCTGTTCACTCTTGACCACAGGCCGAAGCTaGTTGTGGTCTCCAAGCAGAACCACCTTCTCAACC +
Preference number: 6 (lower is better)
Translates to: LCSCSLLTTGRS*LWSPSRTTFST
Trigger: GGTTGAGAAGGTGGTTCTGCTTGGAGACCACAAGCAGCTTCGGCCTGTGGTCAAGAGTGAACAGCTGCAGAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp TACCTCTCAAAGAGAGACCGATCCATCCCCAGACTCTaGAGCTGTTCACTCTTGACCACAGGCCGAAGCTGC +
Preference number: 6 (lower is better)
Translates to: YLSKRDRSIPRL*SCSLLTTGRSC
Trigger: GCAGCTTCGGCCTGTGGTCAAGAGTGAACAGCTGCAGAGTCTGGGGATGGATCGGTCTCTCTTTGAGAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp CCTATAGTAGTGACAGACTTGATAGCGCATAGGCGTTaGGAAGCTAGGCCTGCGGCCCACCTTACGCCAGAT +
Preference number: 6 (lower is better)
Translates to: PIVVTDLIAHRR*EARPAAHLTPD
Trigger: ATCTGGCGTAAGGTGGGCCGCAGGCCTAGCTTCCCAACGCCTATGCGCTATCAAGTCTGTCACTACTATAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp GACAGCCTGCACAAGCACCCCTACCTTGTATTGGGCTaGGGAGCTTTGTACACAGAAGTGCTTTCCCTGTGC +
Preference number: 6 (lower is better)
Translates to: DSLHKHPYLVLG*GALYTEVLSLC
Trigger: GCACAGGGAAAGCACTTCTGTGTACAAAGCTCCCCAGCCCAATACAAGGTAGGGGTGCTTGTGCAGGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp AAGGCGACAGCCTGCACAAGCACCCCTACCTTGTATTaGGCTGGGGAGCTTTGTACACAGAAGTGCTTTCCC +
Preference number: 6 (lower is better)
Translates to: KATACTSTPTLY*AGELCTQKCFP
Trigger: GGGAAAGCACTTCTGTGTACAAAGCTCCCCAGCCCAATACAAGGTAGGGGTGCTTGTGCAGGCTGTCGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp ATGGCAGAACATGAGAGGGTAGTGTTGGGGGTGACGTaGGACTTTGCCACTGGCCTGGATGGGATTACCCTT +
Preference number: 6 (lower is better)
Translates to: MAEHERVVLGVT*DFATGLDGITL
Trigger: AAGGGTAATCCCATCCAGGCCAGTGGCAAAGTCCCACGTCACCCCCAACACTACCCTCTCATGTTCTGCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp ATCTGTTCCAGTGACAGCTCCTCAGGGAAGGCGCTGTaGTGTTCTATGCACTCGCGGATGAAGCTTCTCCAG +
Preference number: 6 (lower is better)
Translates to: ICSSDSSSGKAL*CSMHSRMKLLQ
Trigger: CTGGAGAAGCTTCATCCGCGAGTGCATAGAACACCACAGCGCCTTCCCTGAGGAGCTGTCACTGGAACAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp CACCGTGACCATGGTCCCTTCAGCTATGAGCCTTTGTaGGCCCTGGGCCATAGATTTTTGCTCTGTCTCTGG +
Preference number: 6 (lower is better)
Translates to: HRDHGPFSYEPL*ALGHRFLLCLW
Trigger: CCAGAGACAGAGCAAAAATCTATGGCCCAGGGCCCACAAAGGCTCATAGCTGAAGGGACCATGGTCACGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 72 bp GAAGGCGACAGCCTGCACAAGCACCCCTACCTTGTATaGGGCTGGGGAGCTTTGTACACAGAAGTGCTTTCC +
Preference number: 6 (lower is better)
Translates to: EGDSLHKHPYLV*GWGALYTEVLS
Trigger: GGAAAGCACTTCTGTGTACAAAGCTCCCCAGCCCAATACAAGGTAGGGGTGCTTGTGCAGGCTGTCGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 72 bp TCGGGCAGCGTTTCCCGGTTTATAGGGAAAAGCACTTaGAAGCAGCGGGCACCCATCTCGACATCCACTACG +
Preference number: 6 (lower is better)
Translates to: SGSVSRFIGKST*KQRAPISTSTT
Trigger: CGTAGTGGATGTCGAGATGGGTGCCCGCTGCTTCAAAGTGCTTTTCCCTATAAACCGGGAAACGCTGCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 72 bp GAAGGTACTGGTCTTGCAGAGCCTGGTGCACATGGCTaGAAAAGCAGTCACCTGGCCGTTCCATGTGCTCCA +
Preference number: 6 (lower is better)
Translates to: EGTGLAEPGAHG*KSSHLAVPCAP
Trigger: TGGAGCACATGGAACGGCCAGGTGACTGCTTTTCAAGCCATGTGCACCAGGCTCTGCAAGACCAGTACCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 72 bp TCACCAGACAGCCCATGGGCCACCCAGGTATATGTATaGGGGTCAATGTTCAGGAAGGGGCCAAGGCCACTA +
Preference number: 6 (lower is better)
Translates to: SPDSPWATQVYV*GSMFRKGPRPL
Trigger: TAGTGGCCTTGGCCCCTTCCTGAACATTGACCCCAATACATATACCTGGGTGGCCCATGGGCTGTCTGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 72 bp CACTCGGGCTGCTGTCAGTTGGCATCTGCTCCTGGTTaGACCTGTGGAACCAGTACACAATGTGGAAGCCCA +
Preference number: 6 (lower is better)
Translates to: HSGCCQLASAPG*TCGTSTQCGSP
Trigger: TGGGCTTCCACATTGTGTACTGGTTCCACAGGTCAAACCAGGAGCAGATGCCAACTGACAGCAGCCCGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 72 bp TGCAGCTGTTCACTCTTGACCACAGGCCGAAGCTGCTaGTGGTCTCCAAGCAGAACCACCTTCTCAACCGTC +
Preference number: 6 (lower is better)
Translates to: CSCSLLTTGRSC*WSPSRTTFSTV
Trigger: GACGGTTGAGAAGGTGGTTCTGCTTGGAGACCACAAGCAGCTTCGGCCTGTGGTCAAGAGTGAACAGCTGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 72 bp GGTAATAGAGGTCACAGTCACTCCGGTGACTCCTCTTaGCATGAGGCCCCTACTGATTGCAGCAGCCTGTGC +
Preference number: 6 (lower is better)
Translates to: GNRGHSHSGDSS*HEAPTDCSSLC
Trigger: GCACAGGCTGCTGCAATCAGTAGGGGCCTCATGCAAAGAGGAGTCACCGGAGTGACTGTGACCTCTATTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 90 bp GCTCTGGTGCCCTGCACAGCCTCTTTCAGTTTCAATCGGGGAAGGTaGTTCTTGAGCTCAAATGTCCAGACCAGTGCCTCCTCAGGGCTT +
Preference number: 6 (lower is better)
Translates to: ALVPCTASFSFNRGR*FLSSNVQTSASSGL
Trigger: AAGCCCTGAGGAGGCACTGGTCTGGACATTTGAGCTCAAGAACAACCTTCCCCGATTGAAACTGAAAGAGGCTGTGCAGGGCACCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 90 bp AAAGCTGCCGAAGGCGACAGCCTGCACAAGCACCCCTACCTTGTATaGGGCTGGGGAGCTTTGTACACAGAAGTGCTTTCCCTGTGCATA +
Preference number: 6 (lower is better)
Translates to: KAAEGDSLHKHPYLV*GWGALYTEVLSLCI
Trigger: TATGCACAGGGAAAGCACTTCTGTGTACAAAGCTCCCCAGCCCAATACAAGGTAGGGGTGCTTGTGCAGGCTGTCGCCTTCGGCAGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 90 bp GTCCACCATCTGGCTGTAATCCTGAGTACCAGCTGCAAGCTGCACTaGTTTCCAGAGGGAAGTCAGGAGATGCAGCTGCTTGTTGGGGGT +
Preference number: 6 (lower is better)
Translates to: VHHLAVILSTSCKLH*FPEGSQEMQLLVGG
Trigger: ACCCCCAACAAGCAGCTGCATCTCCTGACTTCCCTCTGGAAACAAGTGCAGCTTGCAGCTGGTACTCAGGATTACAGCCAGATGGTGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 90 bp CCCAGACTCTGCAGCTGTTCACTCTTGACCACAGGCCGAAGCTGCTaGTGGTCTCCAAGCAGAACCACCTTCTCAACCGTCTTTGAGAAG +
Preference number: 6 (lower is better)
Translates to: PRLCSCSLLTTGRSC*WSPSRTTFSTVFEK
Trigger: CTTCTCAAAGACGGTTGAGAAGGTGGTTCTGCTTGGAGACCACAAGCAGCTTCGGCCTGTGGTCAAGAGTGAACAGCTGCAGAGTCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 90 bp CTGGCTCTTGGTAATAGAGGTCACAGTCACTCCGGTGACTCCTCTTaGCATGAGGCCCCTACTGATTGCAGCAGCCTGTGCATTGTAGGG +
Preference number: 6 (lower is better)
Translates to: LALGNRGHSHSGDSS*HEAPTDCSSLCIVG
Trigger: CCCTACAATGCACAGGCTGCTGCAATCAGTAGGGGCCTCATGCAAAGAGGAGTCACCGGAGTGACTGTGACCTCTATTACCAAGAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp TCCCCAAAGAGAGGATATGTGAGCAGATCTCCTCTCTaGAGCCCATCCAACTGCTCAGCCTTCCACACAGCC +
Preference number: 6 (lower is better)
Translates to: SPKRGYVSRSPL*SPSNCSAFHTA
Trigger: GGCTGTGTGGAAGGCTGAGCAGTTGGATGGGCTTCAGAGAGGAGATCTGCTCACATATCCTCTCTTTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp TGCTCCAGGGAGGAGCAGTGGTTCTCAAATGCCTCTTaGGAATTACAGGTGACCAGGCAGGCATGGCAGTAC +
Preference number: 6 (lower is better)
Translates to: CSREEQWFSNAS*ELQVTRQAWQY
Trigger: GTACTGCCATGCCTGCCTGGTCACCTGTAATTCTCAAGAGGCATTTGAGAACCACTGCTCCTCCCTGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp GTGGTCTCCAAGCAGAACCACCTTCTCAACCGTCTTTaGGAAGCACACCAAGGGGATAAGGGTCTCTGGCTC +
Preference number: 6 (lower is better)
Translates to: VVSKQNHLLNRL*EAHQGDKGLWL
Trigger: GAGCCAGAGACCCTTATCCCCTTGGTGTGCTTCTCAAAGACGGTTGAGAAGGTGGTTCTGCTTGGAGACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp TCCTGTTTTGAGTGTGCCTTGATGCAGACCTCTCCGTaGTCACAGAGATCAGGCCTAGGGCAGAGATCGAAC +
Preference number: 6 (lower is better)
Translates to: SCFECALMQTSP*SQRSGLGQRSN
Trigger: GTTCGATCTCTGCCCTAGGCCTGATCTCTGTGAGCACGGAGAGGTCTGCATCAAGGCACACTCAAAACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp CAACGTGGTTGGATCAGTCTGTCTTGGAGGACGATCTaGATACATCACCCTGAGTGGAGTGGCCTCTGGATG +
Preference number: 6 (lower is better)
Translates to: QRGWISLSWRTI*IHHPEWSGLWM
Trigger: CATCCAGAGGCCACTCCACTCAGGGTGATGTATGCAGATCGTCCTCCAAGACAGACTGATCCAACCACGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp TCAGCCGAGTTAAGCCAGGATGTCATGGACATGTCCTaGTCAGGGCTTCCTGCCACATGGCAGAACATGAGA +
Preference number: 6 (lower is better)
Translates to: SAELSQDVMDMS*SGLPATWQNMR
Trigger: TCTCATGTTCTGCCATGTGGCAGGAAGCCCTGAGCAGGACATGTCCATGACATCCTGGCTTAACTCGGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp GTTGTAGTTCTGCCGCTCCAAGAACCTGCTGGTAGATaGCTTGTGAAAAGAATGCTGGCGAGGCCAGTTGCC +
Preference number: 6 (lower is better)
Translates to: VVVLPLQEPAGR*LVKRMLARPVA
Trigger: GGCAACTGGCCTCGCCAGCATTCTTTTCACAAGGCATCTACCAGCAGGTTCTTGGAGCGGCAGAACTACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
CDS GCA 72 bp GTAATAGAGGTCACAGTCACTCCGGTGACTCCTCTTTaGATGAGGCCCCTACTGATTGCAGCAGCCTGTGCA +
Preference number: 6 (lower is better)
Translates to: VIEVTVTPVTPL*MRPLLIAAACA
Trigger: TGCACAGGCTGCTGCAATCAGTAGGGGCCTCATGCAAAGAGGAGTCACCGGAGTGACTGTGACCTCTATTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp TCAACTATAACATGGATGAGAAGTGTGGGGCAGATTTaGTGCTTAGGGCAATGGCCCCTGGGATCCACGGGG +
Preference number: 6 (lower is better)
Translates to: STITWMRSVGQI*CLGQWPLGSTG
Trigger: CCCCGTGGATCCCAGGGGCCATTGCCCTAAGCACCAAATCTGCCCCACACTTCTCATCCATGTTATAGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp ACGATCTGCATACATCACCCTGAGTGGAGTGGCCTCTaGATGGCCACTGCTGACGTAGTCGTGGAAATACTC +
Preference number: 6 (lower is better)
Translates to: TICIHHPEWSGL*MATADVVVEIL
Trigger: GAGTATTTCCACGACTACGTCAGCAGTGGCCATCCAGAGGCCACTCCACTCAGGGTGATGTATGCAGATCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp CTAGCTTTGAGTGTCAATGAGGCCCAGTTCTGTCTCTaGGCCACACCCTGCTCAATCTGTTCCAGTGACAGC +
Preference number: 6 (lower is better)
Translates to: LALSVNEAQFCL*ATPCSICSSDS
Trigger: GCTGTCACTGGAACAGATTGAGCAGGGTGTGGCCCAGAGACAGAACTGGGCCTCATTGACACTCAAAGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp CGGATTATGGAGGGTGCAAATCGCAGGCTCTTGATCTaGCCACCACCTTTCTCCATGGTGAGGAAGAGAGAG +
Preference number: 6 (lower is better)
Translates to: RIMEGANRRLLI*PPPFSMVRKRE
Trigger: CTCTCTCTTCCTCACCATGGAGAAAGGTGGTGGCCAGATCAAGAGCCTGCGATTTGCACCCTCCATAATCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp CTCTTGATCAGTTCTTCGGCTTCCTCATACGACAGCTaGCGGTCAGAGCGGATTATGGAGGGTGCAAATCGC +
Preference number: 6 (lower is better)
Translates to: LLISSSASSYDS*RSERIMEGANR
Trigger: GCGATTTGCACCCTCCATAATCCGCTCTGACCGCCAGCTGTCGTATGAGGAAGCCGAAGAACTGATCAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp CTGCTGTCAGTTGGCATCTGCTCCTGGTTTGACCTGTaGAACCAGTACACAATGTGGAAGCCCACAACGGTC +
Preference number: 6 (lower is better)
Translates to: LLSVGICSWFDL*NQYTMWKPTTV
Trigger: GACCGTTGTGGGCTTCCACATTGTGTACTGGTTCCACAGGTCAAACCAGGAGCAGATGCCAACTGACAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 72 bp CTCAACTATAACATGGATGAGAAGTGTGGGGCAGATTaGGTGCTTAGGGCAATGGCCCCTGGGATCCACGGG +
Preference number: 6 (lower is better)
Translates to: LNYNMDEKCGAD*VLRAMAPGIHG
Trigger: CCCGTGGATCCCAGGGGCCATTGCCCTAAGCACCAAATCTGCCCCACACTTCTCATCCATGTTATAGTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 72 bp GAATTACAGGTGACCAGGCAGGCATGGCAGTACAGTTaGGTCACAGGAGGGTTAGGGTTAGGGCTGGCTTTC +
Preference number: 6 (lower is better)
Translates to: ELQVTRQAWQYS*VTGGLGLGLAF
Trigger: GAAAGCCAGCCCTAACCCTAACCCTCCTGTGACCAAACTGTACTGCCATGCCTGCCTGGTCACCTGTAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 72 bp GCCATAGATTTTTGCTCTGTCTCTGGGCCCCTAGCTTaGAGTGTCAATGAGGCCCAGTTCTGTCTCTGGGCC +
Preference number: 6 (lower is better)
Translates to: AIDFCSVSGPLA*SVNEAQFCLWA
Trigger: GGCCCAGAGACAGAACTGGGCCTCATTGACACTCAAAGCTAGGGGCCCAGAGACAGAGCAAAAATCTATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 72 bp AGCGCAGGAACTTCCACAGCACAGATGAGGGTAGGTTaGTGTACTCTCGGGCCTTCTGTGGTGCAGAGCAAA +
Preference number: 6 (lower is better)
Translates to: SAGTSTAQMRVG*CTLGPSVVQSK
Trigger: TTTGCTCTGCACCACAGAAGGCCCGAGAGTACACAAACCTACCCTCATCTGTGCTGTGGAAGTTCCTGCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 72 bp TCAGAGCGGATTATGGAGGGTGCAAATCGCAGGCTCTaGATCTGGCCACCACCTTTCTCCATGGTGAGGAAG +
Preference number: 6 (lower is better)
Translates to: SERIMEGANRRL*IWPPPFSMVRK
Trigger: CTTCCTCACCATGGAGAAAGGTGGTGGCCAGATCAAGAGCCTGCGATTTGCACCCTCCATAATCCGCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 72 bp TTTATGATGCGGACCACCTGTGTGACTTCCTCTGGGTaGGCCCTAGAGTTCTCATTGCCATCCTCGGTGGAC +
Preference number: 6 (lower is better)
Translates to: FMMRTTCVTSSG*ALEFSLPSSVD
Trigger: GTCCACCGAGGATGGCAATGAGAACTCTAGGGCCAACCCAGAGGAAGTCACACAGGTGGTCCGCATCATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp CAGCCTCTTTCAGTTTCAATCGGGGAAGGTTGTTCTTaGGCTCAAATGTCCAGACCAGTGCCTCCTCAGGGC +
Preference number: 6 (lower is better)
Translates to: QPLSVSIGEGCS*AQMSRPVPPQG
Trigger: GCCCTGAGGAGGCACTGGTCTGGACATTTGAGCTCAAGAACAACCTTCCCCGATTGAAACTGAAAGAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp TATAGATGTCTGCAGCACTGTTGGTGTGTGTGCAGATaGGCACCTTGGTGTGGGGCTGCTGGACAACCTCAA +
Preference number: 6 (lower is better)
Translates to: YRCLQHCWCVCR*APWCGAAGQPQ
Trigger: TTGAGGTTGTCCAGCAGCCCCACACCAAGGTGCTCATCTGCACACACACCAACAGTGCTGCAGACATCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp GCTATGAGCCTTTGTGGGCCCTGGGCCATAGATTTTTaGTCTGTCTCTGGGCCCCTAGCTTTGAGTGTCAAT +
Preference number: 6 (lower is better)
Translates to: AMSLCGPWAIDF*SVSGPLALSVN
Trigger: ATTGACACTCAAAGCTAGGGGCCCAGAGACAGAGCAAAAATCTATGGCCCAGGGCCCACAAAGGCTCATAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp AAGGTCCACCATCTGGCTGTAATCCTGAGTACCAGCTaGAAGCTGCACTTGTTTCCAGAGGGAAGTCAGGAG +
Preference number: 6 (lower is better)
Translates to: KVHHLAVILSTS*KLHLFPEGSQE
Trigger: CTCCTGACTTCCCTCTGGAAACAAGTGCAGCTTGCAGCTGGTACTCAGGATTACAGCCAGATGGTGGACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp CCCTGCAACTGCCCCTGGGATGTGTCCCAAGAGATATaGACATCGTGCAGCACAATGGAGTCGTTTTCTGTA +
Preference number: 6 (lower is better)
Translates to: PCNCPWDVSQEI*TSCSTMESFSV
Trigger: TACAGAAAACGACTCCATTGTGCTGCACGATGTGCATATCTCTTGGGACACATCCCAGGGGCAGTTGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp CAAGGGGATAAGGGTCTCTGGCTCAGTGGCCATGCCTaGCTCGTCGATAAGGATCTGTCGAACATTCAGAAT +
Preference number: 6 (lower is better)
Translates to: QGDKGLWLSGHA*LVDKDLSNIQN
Trigger: ATTCTGAATGTTCGACAGATCCTTATCGACGAGGCAGGCATGGCCACTGAGCCAGAGACCCTTATCCCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp GGTGCATCTATTCCAGTGACGCCTACAGCCCAACCCTaGCCTATAGTAGTGACAGACTTGATAGCGCATAGG +
Preference number: 6 (lower is better)
Translates to: GASIPVTPTAQP*PIVVTDLIAHR
Trigger: CCTATGCGCTATCAAGTCTGTCACTACTATAGGCCAGGGTTGGGCTGTAGGCGTCACTGGAATAGATGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp GTTGGGGGTGACGTGGGACTTTGCCACTGGCCTGGATaGGATTACCCTTGGCTAAATAGAAATGATGGGAGA +
Preference number: 6 (lower is better)
Translates to: VGGDVGLCHWPG*DYPWLNRNDGR
Trigger: TCTCCCATCATTTCTATTTAGCCAAGGGTAATCCCATCCAGGCCAGTGGCAAAGTCCCACGTCACCCCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp AGGGATAGGCAGGCCCAAGGCGATGCTAATGACCAATaGGGATGCTGTTTTCAGTTGACGCACTGCTTCTTC +
Preference number: 6 (lower is better)
Translates to: RDRQAQGDANDQ*GCCFQLTHCFF
Trigger: GAAGAAGCAGTGCGTCAACTGAAAACAGCATCCCCATTGGTCATTAGCATCGCCTTGGGCCTGCCTATCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp CCGGTGGTGAAGGGTAATGCTCCTGAGGCTCTGATTTaGTCTTCCTTCCTGAGAGGTCTTGCCAAACAGACT +
Preference number: 6 (lower is better)
Translates to: PVVKGNAPEALI*SSFLRGLAKQT
Trigger: AGTCTGTTTGGCAAGACCTCTCAGGAAGGAAGACCAAATCAGAGCCTCAGGAGCATTACCCTTCACCACCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp AGCTGTTCACTCTTGACCACAGGCCGAAGCTGCTTGTaGTCTCCAAGCAGAACCACCTTCTCAACCGTCTTT +
Preference number: 6 (lower is better)
Translates to: SCSLLTTGRSCL*SPSRTTFSTVF
Trigger: AAAGACGGTTGAGAAGGTGGTTCTGCTTGGAGACCACAAGCAGCTTCGGCCTGTGGTCAAGAGTGAACAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp ATACGGTACTGTGTGTCCAGCATGATGGCATCCCTGTaGTACCTCTCAAAGAGAGACCGATCCATCCCCAGA +
Preference number: 6 (lower is better)
Translates to: IRYCVSSMMASL*YLSKRDRSIPR
Trigger: TCTGGGGATGGATCGGTCTCTCTTTGAGAGGTACCACAGGGATGCCATCATGCTGGACACACAGTACCGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 72 bp CCCTGCACAGCCTCTTTCAGTTTCAATCGGGGAAGGTaGTTCTTGAGCTCAAATGTCCAGACCAGTGCCTCC +
Preference number: 6 (lower is better)
Translates to: PCTASFSFNRGR*FLSSNVQTSAS
Trigger: GGAGGCACTGGTCTGGACATTTGAGCTCAAGAACAACCTTCCCCGATTGAAACTGAAAGAGGCTGTGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 72 bp GGCTGCCACCTGAGTGGTGTGAGTGTCTGTGTGTGCTaGTTGCTCACAAGGAATTCAGCCACATGGCTGTTA +
Preference number: 6 (lower is better)
Translates to: GCHLSGVSVCVC*LLTRNSATWLL
Trigger: TAACAGCCATGTGGCTGAATTCCTTGTGAGCAACAAGCACACACAGACACTCACACCACTCAGGTGGCAGCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 90 bp GGTGTGGGCTGCCACCTGAGTGGTGTGAGTGTCTGTGTGTGCTTGTaGCTCACAAGGAATTCAGCCACATGGCTGTTAAACTGGATCATG +
Preference number: 6 (lower is better)
Translates to: GVGCHLSGVSVCVCL*LTRNSATWLLNWIM
Trigger: CATGATCCAGTTTAACAGCCATGTGGCTGAATTCCTTGTGAGCAACAAGCACACACAGACACTCACACCACTCAGGTGGCAGCCCACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 90 bp GCTCTGGTGGATCTTTACTTTCTCCCTTGGATGAAAACGCTTATCTaGCTCCTGGATGAGGGCAGCTATCTCAGGCCAGCGCTGCTCCTT +
Preference number: 6 (lower is better)
Translates to: ALVDLYFLPWMKTLI*LLDEGSYLRPALLL
Trigger: AAGGAGCAGCGCTGGCCTGAGATAGCTGCCCTCATCCAGGAGCAAGATAAGCGTTTTCATCCAAGGGAGAAAGTAAAGATCCACCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 90 bp TGTGGGTCCTTCATCTCTGCCACAAAAATCTTAGTCACAGAACCGTaGATAGGGATCATGATGCGGGGGTCCCACTCATCCATCCGACAC +
Preference number: 6 (lower is better)
Translates to: CGSFISATKILVTEP*IGIMMRGSHSSIRH
Trigger: GTGTCGGATGGATGAGTGGGACCCCCGCATCATGATCCCTATCAACGGTTCTGTGACTAAGATTTTTGTGGCAGAGATGAAGGACCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CAA 90 bp CACAAGGAATTCAGCCACATGGCTGTTAAACTGGATCATGTACTCTaGGACCATGATGTGAGCTGTGCGGAAGCCCAGCACACTGTCCTC +
Preference number: 6 (lower is better)
Translates to: HKEFSHMAVKLDHVL*DHDVSCAEAQHTVL
Trigger: GAGGACAGTGTGCTGGGCTTCCGCACAGCTCACATCATGGTCCAAGAGTACATGATCCAGTTTAACAGCCATGTGGCTGAATTCCTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp CCTCTTCTGGAACCTTCTCCATGGTCATGTGATGGATaGGAAAATATACCTGCTTGGGCGCCTCCTGCCGAT +
Preference number: 6 (lower is better)
Translates to: PLLEPSPWSCDG*ENIPAWAPPAD
Trigger: ATCGGCAGGAGGCGCCCAAGCAGGTATATTTTCTCATCCATCACATGACCATGGAGAAGGTTCCAGAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp CTCAGCACCTCTTCTGGAACCTTCTCCATGGTCATGTaGTGGATGAGAAAATATACCTGCTTGGGCGCCTCC +
Preference number: 6 (lower is better)
Translates to: LSTSSGTFSMVM*WMRKYTCLGAS
Trigger: GGAGGCGCCCAAGCAGGTATATTTTCTCATCCATCACATGACCATGGAGAAGGTTCCAGAAGAGGTGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp CTGGCCTTGAATGAGGCGGTGGATGGGAACTTGCTGTaGGTCCTTCATCTCTGCCACAAAAATCTTAGTCAC +
Preference number: 6 (lower is better)
Translates to: LALNEAVDGNLL*VLHLCHKNLSH
Trigger: GTGACTAAGATTTTTGTGGCAGAGATGAAGGACCCACAGCAAGTTCCCATCCACCGCCTCATTCAAGGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp TCCACAGCGGCTCTGGTGGATCTTTACTTTCTCCCTTaGATGAAAACGCTTATCTTGCTCCTGGATGAGGGC +
Preference number: 6 (lower is better)
Translates to: STAALVDLYFLP*MKTLILLLDEG
Trigger: GCCCTCATCCAGGAGCAAGATAAGCGTTTTCATCCAAGGGAGAAAGTAAAGATCCACCAGAGCCGCTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp GCCGAATGCAGAGGTAGCAACAGCCAAAGTGGATGTTaGTGCATTTCTCCTGGAGAAAAGCAGCTTCCAGCT +
Preference number: 6 (lower is better)
Translates to: AECRGSNSQSGC*CISPGEKQLPA
Trigger: AGCTGGAAGCTGCTTTTCTCCAGGAGAAATGCATCAACATCCACTTTGGCTGTTGCTACCTCTGCATTCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp AAGGATCTGTCGAACATTCAGAATTTTCAGGCTCTTTaGTGCCGCACAGGAGCACGTGCACAGGATGACCGA +
Preference number: 6 (lower is better)
Translates to: KDLSNIQNFQAL*CRTGARAQDDR
Trigger: TCGGTCATCCTGTGCACGTGCTCCTGTGCGGCATCAAAGAGCCTGAAAATTCTGAATGTTCGACAGATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp AGATGTCCTTATGCATACGGTACTGTGTGTCCAGCATaGTGGCATCCCTGTGGTACCTCTCAAAGAGAGACC +
Preference number: 6 (lower is better)
Translates to: RCPYAYGTVCPA*WHPCGTSQRET
Trigger: GGTCTCTCTTTGAGAGGTACCACAGGGATGCCATCATGCTGGACACACAGTACCGTATGCATAAGGACATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp GCGGTGGATGGGAACTTGCTGTGGGTCCTTCATCTCTaGCACAAAAATCTTAGTCACAGAACCGTTGATAGG +
Preference number: 6 (lower is better)
Translates to: AVDGNLLWVLHL*HKNLSHRTVDR
Trigger: CCTATCAACGGTTCTGTGACTAAGATTTTTGTGGCAGAGATGAAGGACCCACAGCAAGTTCCCATCCACCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp TGCCCCTGGGATGTGTCCCAAGAGATATGCACATCGTaGAGCACAATGGAGTCGTTTTCTGTAACAGCATTG +
Preference number: 6 (lower is better)
Translates to: CPWDVSQEICTS*STMESFSVTAL
Trigger: CAATGCTGTTACAGAAAACGACTCCATTGTGCTGCACGATGTGCATATCTCTTGGGACACATCCCAGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS GCA 72 bp TCTTTGCATGAGGCCCCTACTGATTGCAGCAGCCTGTaGATTGTAGGGTGTAAGGACAGCAATATCTTTGGG +
Preference number: 6 (lower is better)
Translates to: SLHEAPTDCSSL*IVGCKDSNIFG
Trigger: CCCAAAGATATTGCTGTCCTTACACCCTACAATGCACAGGCTGCTGCAATCAGTAGGGGCCTCATGCAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp GAAATGATGGGAGACGAAGTTGATGATGGCTGCAGTTaGCCGGTAGTTCTCATGGAAGATGATGCGACTCTG +
Preference number: 6 (lower is better)
Translates to: EMMGDEVDDGCS*PVVLMEDDATL
Trigger: CAGAGTCGCATCATCTTCCATGAGAACTACCGGTCAACTGCAGCCATCATCAACTTCGTCTCCCATCATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp TCCACGAATTGTCGCTTTAGGCCCTCAACTATAACATaGATGAGAAGTGTGGGGCAGATTTGGTGCTTAGGG +
Preference number: 6 (lower is better)
Translates to: STNCRFRPSTIT*MRSVGQIWCLG
Trigger: CCCTAAGCACCAAATCTGCCCCACACTTCTCATCCATGTTATAGTTGAGGGCCTAAAGCGACAATTCGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS TCA 72 bp TGGCTTTCCATTTGTTTTCCCCAAAGAGAGGATATGTaGGCAGATCTCCTCTCTGAAGCCCATCCAACTGCT +
Preference number: 6 (lower is better)
Translates to: WLSICFPQREDM*ADLLSEAHPTA
Trigger: AGCAGTTGGATGGGCTTCAGAGAGGAGATCTGCTCACATATCCTCTCTTTGGGGAAAACAAATGGAAAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2
CDS CCA 72 bp TGTGTGTGCTTGTTGCTCACAAGGAATTCAGCCACATaGCTGTTAAACTGGATCATGTACTCTTGGACCATG +
Preference number: 6 (lower is better)
Translates to: CVCLLLTRNSAT*LLNWIMYSWTM
Trigger: CATGGTCCAAGAGTACATGATCCAGTTTAACAGCCATGTGGCTGAATTCCTTGTGAGCAACAAGCACACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094203.11
ENSMUST00000108831.8
ENSMUST00000121484.2