Pregenerated sensors for HELT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047171Ensembl transcript IDs: ENSMUST00000058636.9, ENSMUST00000210652.2
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | TGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTaGCGCTTTCCCATCCAGATCTTGTTAGCACACTAT | + |
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Preference number: 3 (lower is better) Translates to: WLGRTFRRRIRF*RFPIQILLAHY Trigger: ATAGTGTGCTAACAAGATCTGGATGGGAAAGCGTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR TCA 90 bp | TTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACGCTTTCCCATCCAGGGGCGTGTGCAGGTTaGGGCCGTTGGGGTGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: LVGEDLQKANSLLTLSHPGACAG*GRWGGH Trigger: ATGGCCACCCCAACGGCCTCAACCTGCACACGCCCC...TGGATGGGAAAGCGTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR GCA 90 bp | GTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACGCTTTCCCATCCAGATGGGGCTGTGCTGCTGTaGCGGGCTGGGGAGAGGTAC | + |
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Preference number: 4 (lower is better) Translates to: VGEDLQKANSLLTLSHPDGAVLL*RAGERY Trigger: GTACCTCTCCCCAGCCCGGCACAGCAGCACAGCCCC...ATCTGGATGGGAAAGCGTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR CCA 90 bp | GTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACGCTTTCCCATCCAGATAGCACCGGAGGGTGCTaGGGCGTGTGCAGGTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: VGEDLQKANSLLTLSHPDSTGGC*GVCRLR Trigger: CCTCAACCTGCACACGCCCCAGCACCCTCCGGTGCT...ATCTGGATGGGAAAGCGTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR CCA 90 bp | AAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACGCTAGAGCGGCGGAAAGGTaGGCTCGGCGCCCAGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: KIFIGWGGPSEGEFASDARAAER*ARRPGG Trigger: CCCGCCTGGGCGCCGAGCCCACCTTTCCGCCGCTCT...AGCGTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR TCA 90 bp | ATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACGCTTTCGGGGCGTGTGCAGGTTaGGGCCGTTGGGGTGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: IFIGWGGPSEGEFASDAFGACAG*GRWGGH Trigger: ATGGCCACCCCAACGGCCTCAACCTGCACACGCCCC...GAAAGCGTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR GCA 90 bp | ATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACGCTTTCGGGGCTGTGCTGCTGTaGCGGGCTGGGGAGAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: IFIGWGGPSEGEFASDAFGAVLL*RAGERY Trigger: GTACCTCTCCCCAGCCCGGCACAGCAGCACAGCCCC...GAAAGCGTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR GCA 90 bp | AAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACGCTGGGTGCTGGGGCGTGTaGAGGTTGAGGCCGTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KIFIGWGGPSEGEFASDAGCWGV*RLRPLG Trigger: CCCCAACGGCCTCAACCTGCACACGCCCCAGCACCC...AGCGTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR GCA 90 bp | ATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACGCTTTCCAGAGCACCGGAGGGTaGTGGGGCGTGTGCAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: IFIGWGGPSEGEFASDAFQSTGG*WGVCRL Trigger: CAACCTGCACACGCCCCAGCACCCTCCGGTGCTCTG...GAAAGCGTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR CCA 90 bp | TTAGCACAAAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTAGAGCGGCGGAAAGGTaGGCTCGGCGCCCAGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LAQKYLLVGEDLQKANSLRAAER*ARRPGG Trigger: CCCGCCTGGGCGCCGAGCCCACCTTTCCGCCGCTCT...AAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTTTGTGCTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR CCA 90 bp | ATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACGCTTTCAGCACCGGAGGGTGCTaGGGCGTGTGCAGGTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IFIGWGGPSEGEFASDAFSTGGC*GVCRLR Trigger: CCTCAACCTGCACACGCCCCAGCACCCTCCGGTGCT...GAAAGCGTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR TCA 90 bp | TTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACGCTTTCCCATCCACGGAATGCAGAGCTCTaGGGTACTGCACTGTCATCT | + |
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Preference number: 4 (lower is better) Translates to: LVGEDLQKANSLLTLSHPRNAEL*GTALSS Trigger: AGATGACAGTGCAGTACCTCAGAGCTCTGCATTCCG...TGGATGGGAAAGCGTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR GCA 90 bp | GCACAAAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGTGCCGGTCCAGGCCCTaGATCGGAGCCAAGAAGGGG | + |
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Preference number: 4 (lower is better) Translates to: AQKYLLVGEDLQKANSLLCRSRP*IGAKKG Trigger: CCCCTTCTTGGCTCCGATGCAGGGCCTGGACCGGCA...CAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTTTGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR GCA 90 bp | ACAAAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACGGGTGCTGGGGCGTGTaGAGGTTGAGGCCGTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: TKIFIGWGGPSEGEFASDGCWGV*RLRPLG Trigger: CCCCAACGGCCTCAACCTGCACACGCCCCAGCACCC...GTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR GCA 90 bp | AAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACGCTCAGAGCACCGGAGGGTaGTGGGGCGTGTGCAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: KIFIGWGGPSEGEFASDAQSTGG*WGVCRL Trigger: CAACCTGCACACGCCCCAGCACCCTCCGGTGCTCTG...AGCGTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR CCA 90 bp | TTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACGCTTTCCCATCCAGGATGCGCGCATACTTaGTGTCTTTGGTCTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LVGEDLQKANSLLTLSHPGCAHT*CLWSPS Trigger: GGATGGAGACCAAAGACACCAAGTATGCGCGCATCC...TGGATGGGAAAGCGTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR GCA 90 bp | TTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACGCTTTCCCATCCAGCACCAGGTTCTTCATaGACTCGTGGTAACCGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LVGEDLQKANSLLTLSHPAPGSS*TRGNRS Trigger: ACTACGGTTACCACGAGTGCATGAAGAACCTGGTGC...TGGATGGGAAAGCGTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR CCA 90 bp | AAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACGCTGTGGCCCGGGAACTCTaGGCTTGCTGCATGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: KIFIGWGGPSEGEFASDAVAREL*ACCMQL Trigger: CAGCTGCATGCAGCAAGCCCAGAGTTCCCGGGCCAC...AGCGTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR CCA 90 bp | AAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACGCTCAAGTAAGGCAGTGCTaGGCTGCGGGCAGCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KIFIGWGGPSEGEFASDAQVRQC*AAGSSR Trigger: CCTGGAGCTGCCCGCAGCCCAGCACTGCCTTACTTG...AGCGTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR GCA 90 bp | TTAGCACAAAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTTGCCGGTCCAGGCCCTaGATCGGAGCCAAGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LAQKYLLVGEDLQKANSLCRSRP*IGAKKG Trigger: CCCCTTCTTGGCTCCGATGCAGGGCCTGGACCGGCA...AAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTTTGTGCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR CCA 90 bp | ACAAAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACCGCCCAGGCGGGCCTTaGATTGCAAGAAGGCGAGGA | + |
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Preference number: 4 (lower is better) Translates to: TKIFIGWGGPSEGEFASDRPGGP*IARRRG Trigger: TCCTCGCCTTCTTGCAATCCAAGGCCCGCCTGGGCG...GTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR CCA 90 bp | ACAAAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACGCTTCACCTGGGCTGTaGCCCGGGAACTCTGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: TKIFIGWGGPSEGEFASDASPGL*PGNSGL Trigger: AAGCCCAGAGTTCCCGGGCCACAGCCCAGGTGAAGC...GTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR CCA 90 bp | AAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACGCTCATTGTGGCTTCACCTaGGCTGTGGCCCGGGAACTC | + |
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Preference number: 4 (lower is better) Translates to: KIFIGWGGPSEGEFASDAHCGFT*AVAREL Trigger: GAGTTCCCGGGCCACAGCCCAGGTGAAGCCACAATG...AGCGTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR CCA 90 bp | GCACAAAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGCATTGTGGCTTCACCTaGGCTGTGGCCCGGGAACTC | + |
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Preference number: 4 (lower is better) Translates to: AQKYLLVGEDLQKANSLLHCGFT*AVAREL Trigger: GAGTTCCCGGGCCACAGCCCAGGTGAAGCCACAATG...CAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTTTGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR CCA 90 bp | GCACAAAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGCCTGCGGGAACATTGTaGCTTCACCTGGGCTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: AQKYLLVGEDLQKANSLLPAGTL*LHLGCG Trigger: GCCACAGCCCAGGTGAAGCCACAATGTTCCCGCAGG...CAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTTTGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR TCA 90 bp | ACAAAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACTCCGCTCCACGGTGGTaGGGTAGTGCACCAGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: TKIFIGWGGPSEGEFASDSAPRW*GSAPGS Trigger: AGAACCTGGTGCACTACCTCACCACCGTGGAGCGGA...GTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR GCA 90 bp | ACAAAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACAGGCGGGCCTTGGATTaGAAGAAGGCGAGGATGCGC | + |
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Preference number: 4 (lower is better) Translates to: TKIFIGWGGPSEGEFASDRRALD*KKARMR Trigger: GCGCATCCTCGCCTTCTTGCAATCCAAGGCCCGCCT...GTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR CCA 90 bp | TTAGCACAAAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCAAGTAAGGCAGTGCTaGGCTGCGGGCAGCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LAQKYLLVGEDLQKANSLQVRQC*AAGSSR Trigger: CCTGGAGCTGCCCGCAGCCCAGCACTGCCTTACTTG...AAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTTTGTGCTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR CCA 90 bp | GCACAAAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGTTGAGGCCGTTGGGGTaGCCATGGCCGATCAGATTG | + |
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Preference number: 4 (lower is better) Translates to: AQKYLLVGEDLQKANSLLLRPLG*PWPIRL Trigger: CAATCTGATCGGCCATGGCCACCCCAACGGCCTCAA...CAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTTTGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR TCA 90 bp | GCACAAAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGCATGGCCGATCAGATTaGGATAATGCCGGTCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: AQKYLLVGEDLQKANSLLHGRSD*DNAGPG Trigger: GCCTGGACCGGCATTATCTCAATCTGATCGGCCATG...CAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTTTGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR TCA 90 bp | AAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACGCTCGGAATGCAGAGCTCTaGGGTACTGCACTGTCATCT | + |
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Preference number: 4 (lower is better) Translates to: KIFIGWGGPSEGEFASDARNAEL*GTALSS Trigger: AGATGACAGTGCAGTACCTCAGAGCTCTGCATTCCG...AGCGTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR TCA 90 bp | ACAAAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACCATGGCCGATCAGATTaGGATAATGCCGGTCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: TKIFIGWGGPSEGEFASDHGRSD*DNAGPG Trigger: GCCTGGACCGGCATTATCTCAATCTGATCGGCCATG...GTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR CCA 90 bp | TTAGCACAAAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTTTGAGGCCGTTGGGGTaGCCATGGCCGATCAGATTG | + |
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Preference number: 4 (lower is better) Translates to: LAQKYLLVGEDLQKANSLLRPLG*PWPIRL Trigger: CAATCTGATCGGCCATGGCCACCCCAACGGCCTCAA...AAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTTTGTGCTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR GCA 90 bp | AAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACGCTAGAGCTCTGAGGTACTaGACTGTCATCTCCAGGATC | + |
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Preference number: 4 (lower is better) Translates to: KIFIGWGGPSEGEFASDARALRY*TVISRI Trigger: GATCCTGGAGATGACAGTGCAGTACCTCAGAGCTCT...AGCGTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR GCA 90 bp | AAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACGCTGCACCAGGTTCTTCATaGACTCGTGGTAACCGTAGT | + |
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Preference number: 4 (lower is better) Translates to: KIFIGWGGPSEGEFASDAAPGSS*TRGNRS Trigger: ACTACGGTTACCACGAGTGCATGAAGAACCTGGTGC...AGCGTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR GCA 90 bp | TTAGCACAAAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTGCAAGAAGGCGAGGATaGGCGCATACTTGGTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: LAQKYLLVGEDLQKANSLARRRG*AHTWCL Trigger: AAGACACCAAGTATGCGCGCATCCTCGCCTTCTTGC...AAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTTTGTGCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR CCA 90 bp | TTAGCACAAAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTGGATGCGCGCATACTTaGTGTCTTTGGTCTCCATCC | + |
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Preference number: 4 (lower is better) Translates to: LAQKYLLVGEDLQKANSLGCAHT*CLWSPS Trigger: GGATGGAGACCAAAGACACCAAGTATGCGCGCATCC...AAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTTTGTGCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR GCA 90 bp | TTAGCACAAAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTAGAGCTCTGAGGTACTaGACTGTCATCTCCAGGATC | + |
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Preference number: 4 (lower is better) Translates to: LAQKYLLVGEDLQKANSLRALRY*TVISRI Trigger: GATCCTGGAGATGACAGTGCAGTACCTCAGAGCTCT...AAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTTTGTGCTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS CCA 90 bp | GGCCCTGCATCGGAGCCAAGAAGGGGCTGTGCTGCTGTGCCGGGCTaGGGAGAGGTACCGTCGCGCTGGACAAGTAAGGCAGTGCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: GPASEPRRGCAAVPG*GEVPSRWTSKAVLG Trigger: GCCCAGCACTGCCTTACTTGTCCAGCGCGACGGTACCTCTCCCCAGCCCGGCACAGCAGCACAGCCCCTTCTTGGCTCCGATGCAGGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS CCA 90 bp | GCCCGGGAACTCTGGGCTTGCTGCATGCAGCTGATAGGAGAAATCTaGCTCCGGAAGCGAGAGCGGCGGAAAGGTGGGCTCGGCGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: ARELWACCMQLIGEI*LRKRERRKGGLGAQ Trigger: CTGGGCGCCGAGCCCACCTTTCCGCCGCTCTCGCTTCCGGAGCCAGATTTCTCCTATCAGCTGCATGCAGCAAGCCCAGAGTTCCCGGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS GCA 90 bp | TGGGCTCGGCGCCCAGGCGGGCCTTGGATTGCAAGAAGGCGAGGATaGGCGCATACTTGGTGTCTTTGGTCTCCATCCGCTCCACGGTGG | + |
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Preference number: 5 (lower is better) Translates to: WARRPGGPWIARRRG*AHTWCLWSPSAPRW Trigger: CCACCGTGGAGCGGATGGAGACCAAAGACACCAAGTATGCGCGCATCCTCGCCTTCTTGCAATCCAAGGCCCGCCTGGGCGCCGAGCCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS GCA 90 bp | GAGAGCGGCGGAAAGGTGGGCTCGGCGCCCAGGCGGGCCTTGGATTaGAAGAAGGCGAGGATGCGCGCATACTTGGTGTCTTTGGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: ESGGKVGSAPRRALD*KKARMRAYLVSLVS Trigger: GGAGACCAAAGACACCAAGTATGCGCGCATCCTCGCCTTCTTGCAATCCAAGGCCCGCCTGGGCGCCGAGCCCACCTTTCCGCCGCTCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS CCA 90 bp | GAAGCGAGAGCGGCGGAAAGGTGGGCTCGGCGCCCAGGCGGGCCTTaGATTGCAAGAAGGCGAGGATGCGCGCATACTTGGTGTCTTTGG | + |
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Preference number: 5 (lower is better) Translates to: EARAAERWARRPGGP*IARRRGCAHTWCLW Trigger: CCAAAGACACCAAGTATGCGCGCATCCTCGCCTTCTTGCAATCCAAGGCCCGCCTGGGCGCCGAGCCCACCTTTCCGCCGCTCTCGCTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS CCA 90 bp | GCTGATAGGAGAAATCTGGCTCCGGAAGCGAGAGCGGCGGAAAGGTaGGCTCGGCGCCCAGGCGGGCCTTGGATTGCAAGAAGGCGAGGA | + |
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Preference number: 5 (lower is better) Translates to: ADRRNLAPEARAAER*ARRPGGPWIARRRG Trigger: TCCTCGCCTTCTTGCAATCCAAGGCCCGCCTGGGCGCCGAGCCCACCTTTCCGCCGCTCTCGCTTCCGGAGCCAGATTTCTCCTATCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS GCA 90 bp | CATTGTGGCTTCACCTGGGCTGTGGCCCGGGAACTCTGGGCTTGCTaGATGCAGCTGATAGGAGAAATCTGGCTCCGGAAGCGAGAGCGG | + |
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Preference number: 5 (lower is better) Translates to: HCGFTWAVARELWAC*MQLIGEIWLRKRER Trigger: CCGCTCTCGCTTCCGGAGCCAGATTTCTCCTATCAGCTGCATGCAGCAAGCCCAGAGTTCCCGGGCCACAGCCCAGGTGAAGCCACAATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS CCA 90 bp | CTGCGGGAACATTGTGGCTTCACCTGGGCTGTGGCCCGGGAACTCTaGGCTTGCTGCATGCAGCTGATAGGAGAAATCTGGCTCCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LREHCGFTWAVAREL*ACCMQLIGEIWLRK Trigger: CTTCCGGAGCCAGATTTCTCCTATCAGCTGCATGCAGCAAGCCCAGAGTTCCCGGGCCACAGCCCAGGTGAAGCCACAATGTTCCCGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS GCA 90 bp | GAACATTGTGGCTTCACCTGGGCTGTGGCCCGGGAACTCTGGGCTTaGTGCATGCAGCTGATAGGAGAAATCTGGCTCCGGAAGCGAGAG | + |
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Preference number: 5 (lower is better) Translates to: EHCGFTWAVARELWA*CMQLIGEIWLRKRE Trigger: CTCTCGCTTCCGGAGCCAGATTTCTCCTATCAGCTGCATGCAGCAAGCCCAGAGTTCCCGGGCCACAGCCCAGGTGAAGCCACAATGTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS TCA 90 bp | TGCGCGCATACTTGGTGTCTTTGGTCTCCATCCGCTCCACGGTGGTaGGGTAGTGCACCAGGTTCTTCATGCACTCGTGGTAACCGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: CAHTWCLWSPSAPRW*GSAPGSSCTRGNRS Trigger: ACTACGGTTACCACGAGTGCATGAAGAACCTGGTGCACTACCTCACCACCGTGGAGCGGATGGAGACCAAAGACACCAAGTATGCGCGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR CAA 90 bp | ATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACGCTTTCGCGCCCAGGCGGGCCTaGGATTGCAAGAAGGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: IFIGWGGPSEGEFASDAFAPRRA*DCKKAR Trigger: CCTCGCCTTCTTGCAATCCAAGGCCCGCCTGGGCGC...GAAAGCGTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR CAA 90 bp | TTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACGCTTTCCCATCCAGCATACTTGGTGTCTTaGGTCTCCATCCGCTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: LVGEDLQKANSLLTLSHPAYLVS*VSIRST Trigger: CGTGGAGCGGATGGAGACCAAAGACACCAAGTATGC...TGGATGGGAAAGCGTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR CAA 90 bp | TTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACGCTTTCCCATCCAAGGATGCGCGCATACTaGGTGTCTTTGGTCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: LVGEDLQKANSLLTLSHPRMRAY*VSLVSI Trigger: GATGGAGACCAAAGACACCAAGTATGCGCGCATCCT...TGGATGGGAAAGCGTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR CAA 90 bp | ACAAAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACGCGCCCAGGCGGGCCTaGGATTGCAAGAAGGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TKIFIGWGGPSEGEFASDAPRRA*DCKKAR Trigger: CCTCGCCTTCTTGCAATCCAAGGCCCGCCTGGGCGC...GTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR CAA 90 bp | ACAAAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACTGGGGCGTGTGCAGGTaGAGGCCGTTGGGGTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TKIFIGWGGPSEGEFASDWGVCR*RPLGWP Trigger: TGGCCACCCCAACGGCCTCAACCTGCACACGCCCCA...GTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR CAA 90 bp | AAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACGCTCAGGCGGGCCTTGGATaGCAAGAAGGCGAGGATGCG | + |
|
Preference number: 5 (lower is better) Translates to: KIFIGWGGPSEGEFASDAQAGLG*QEGEDA Trigger: CGCATCCTCGCCTTCTTGCAATCCAAGGCCCGCCTG...AGCGTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR CAA 90 bp | ATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACGCTTTCCCGGGAACTCTGGGCTaGCTGCATGCAGCTGATAGG | + |
|
Preference number: 5 (lower is better) Translates to: IFIGWGGPSEGEFASDAFPGTLG*LHAADR Trigger: CCTATCAGCTGCATGCAGCAAGCCCAGAGTTCCCGG...GAAAGCGTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR CAA 90 bp | GCACAAAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGCCCCCTGCGGGAACATaGTGGCTTCACCTGGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: AQKYLLVGEDLQKANSLLPPAGT*WLHLGC Trigger: ACAGCCCAGGTGAAGCCACAATGTTCCCGCAGGGGG...CAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTTTGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR CAA 90 bp | ACAAAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACCAGGCGGGCCTTGGATaGCAAGAAGGCGAGGATGCG | + |
|
Preference number: 5 (lower is better) Translates to: TKIFIGWGGPSEGEFASDQAGLG*QEGEDA Trigger: CGCATCCTCGCCTTCTTGCAATCCAAGGCCCGCCTG...GTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR CAA 90 bp | AAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACGCTCCGGGAACTCTGGGCTaGCTGCATGCAGCTGATAGG | + |
|
Preference number: 5 (lower is better) Translates to: KIFIGWGGPSEGEFASDAPGTLG*LHAADR Trigger: CCTATCAGCTGCATGCAGCAAGCCCAGAGTTCCCGG...AGCGTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR CAA 90 bp | AAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACGCTGCCATAGGGACTGTCTaGCCCAGCTCGTTCAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KIFIGWGGPSEGEFASDAAIGTV*PSSFKQ Trigger: CTGCTTGAACGAGCTGGGCAAGACAGTCCCTATGGC...AGCGTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058636.9 |
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| CDS-3UTR CAA 90 bp | TTAGCACAAAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCCCCCTGCGGGAACATaGTGGCTTCACCTGGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LAQKYLLVGEDLQKANSLPPAGT*WLHLGC Trigger: ACAGCCCAGGTGAAGCCACAATGTTCCCGCAGGGGG...AAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTTTGTGCTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR CAA 90 bp | ACAAAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACGCATACTTGGTGTCTTaGGTCTCCATCCGCTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: TKIFIGWGGPSEGEFASDAYLVS*VSIRST Trigger: CGTGGAGCGGATGGAGACCAAAGACACCAAGTATGC...GTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS-3UTR CAA 90 bp | AAAATATTTATTGGTTGGGGAGGACCTTCAGAAGGCGAATTCGCTTCTGACGCTAGGATGCGCGCATACTaGGTGTCTTTGGTCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: KIFIGWGGPSEGEFASDARMRAY*VSLVSI Trigger: GATGGAGACCAAAGACACCAAGTATGCGCGCATCCT...AGCGTCAGAAGCGAATTCGCCTTCTGAAGGTCCTCCCCAACCAATAAATATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS CCA 72 bp | GCGGCGGAAAGGTGGGCTCGGCGCCCAGGCGGGCCTTaGATTGCAAGAAGGCGAGGATGCGCGCATACTTGG | + |
|
Preference number: 6 (lower is better) Translates to: AAERWARRPGGP*IARRRGCAHTW Trigger: CCAAGTATGCGCGCATCCTCGCCTTCTTGCAATCCAAGGCCCGCCTGGGCGCCGAGCCCACCTTTCCGCCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS CAA 72 bp | AGCGGCGGAAAGGTGGGCTCGGCGCCCAGGCGGGCCTaGGATTGCAAGAAGGCGAGGATGCGCGCATACTTG | + |
|
Preference number: 6 (lower is better) Translates to: SGGKVGSAPRRA*DCKKARMRAYL Trigger: CAAGTATGCGCGCATCCTCGCCTTCTTGCAATCCAAGGCCCGCCTGGGCGCCGAGCCCACCTTTCCGCCGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS GCA 72 bp | GTACCGTCGCGCTGGACAAGTAAGGCAGTGCTGGGCTaGGGGCAGCTCCAGGAGGCCATGGGAATGACCCTG | + |
|
Preference number: 6 (lower is better) Translates to: VPSRWTSKAVLG*GQLQEAMGMTL Trigger: CAGGGTCATTCCCATGGCCTCCTGGAGCTGCCCGCAGCCCAGCACTGCCTTACTTGTCCAGCGCGACGGTAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS CCA 72 bp | AGAAATCTGGCTCCGGAAGCGAGAGCGGCGGAAAGGTaGGCTCGGCGCCCAGGCGGGCCTTGGATTGCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: RNLAPEARAAER*ARRPGGPWIAR Trigger: TCTTGCAATCCAAGGCCCGCCTGGGCGCCGAGCCCACCTTTCCGCCGCTCTCGCTTCCGGAGCCAGATTTCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS CCA 72 bp | TGGGGTAGCCCCCTGCGGGAACATTGTGGCTTCACCTaGGCTGTGGCCCGGGAACTCTGGGCTTGCTGCATG | + |
|
Preference number: 6 (lower is better) Translates to: WGSPLREHCGFT*AVARELWACCM Trigger: CATGCAGCAAGCCCAGAGTTCCCGGGCCACAGCCCAGGTGAAGCCACAATGTTCCCGCAGGGGGCTACCCCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS CAA 72 bp | CGGAAAGGTGGGCTCGGCGCCCAGGCGGGCCTTGGATaGCAAGAAGGCGAGGATGCGCGCATACTTGGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: RKGGLGAQAGLG*QEGEDARILGV Trigger: GACACCAAGTATGCGCGCATCCTCGCCTTCTTGCAATCCAAGGCCCGCCTGGGCGCCGAGCCCACCTTTCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS CAA 90 bp | CGAGAGCGGCGGAAAGGTGGGCTCGGCGCCCAGGCGGGCCTTGGATaGCAAGAAGGCGAGGATGCGCGCATACTTGGTGTCTTTGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: RERRKGGLGAQAGLG*QEGEDARILGVFGL Trigger: GAGACCAAAGACACCAAGTATGCGCGCATCCTCGCCTTCTTGCAATCCAAGGCCCGCCTGGGCGCCGAGCCCACCTTTCCGCCGCTCTCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS CAA 90 bp | GGAAGCGAGAGCGGCGGAAAGGTGGGCTCGGCGCCCAGGCGGGCCTaGGATTGCAAGAAGGCGAGGATGCGCGCATACTTGGTGTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: GSESGGKVGSAPRRA*DCKKARMRAYLVSL Trigger: CAAAGACACCAAGTATGCGCGCATCCTCGCCTTCTTGCAATCCAAGGCCCGCCTGGGCGCCGAGCCCACCTTTCCGCCGCTCTCGCTTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS GCA 72 bp | GGAAAGGTGGGCTCGGCGCCCAGGCGGGCCTTGGATTaGAAGAAGGCGAGGATGCGCGCATACTTGGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GKVGSAPRRALD*KKARMRAYLVS Trigger: AGACACCAAGTATGCGCGCATCCTCGCCTTCTTGCAATCCAAGGCCCGCCTGGGCGCCGAGCCCACCTTTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS GCA 72 bp | CGCCCAGGCGGGCCTTGGATTGCAAGAAGGCGAGGATaGGCGCATACTTGGTGTCTTTGGTCTCCATCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: RPGGPWIARRRG*AHTWCLWSPSA Trigger: AGCGGATGGAGACCAAAGACACCAAGTATGCGCGCATCCTCGCCTTCTTGCAATCCAAGGCCCGCCTGGGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS CCA 72 bp | CTCTGGGCTTGCTGCATGCAGCTGATAGGAGAAATCTaGCTCCGGAAGCGAGAGCGGCGGAAAGGTGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LWACCMQLIGEI*LRKRERRKGGL Trigger: GAGCCCACCTTTCCGCCGCTCTCGCTTCCGGAGCCAGATTTCTCCTATCAGCTGCATGCAGCAAGCCCAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS CAA 90 bp | GGAACATTGTGGCTTCACCTGGGCTGTGGCCCGGGAACTCTGGGCTaGCTGCATGCAGCTGATAGGAGAAATCTGGCTCCGGAAGCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: GTLWLHLGCGPGTLG*LHAADRRNLAPEAR Trigger: TCTCGCTTCCGGAGCCAGATTTCTCCTATCAGCTGCATGCAGCAAGCCCAGAGTTCCCGGGCCACAGCCCAGGTGAAGCCACAATGTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS CCA 72 bp | CATTGTGGCTTCACCTGGGCTGTGGCCCGGGAACTCTaGGCTTGCTGCATGCAGCTGATAGGAGAAATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: HCGFTWAVAREL*ACCMQLIGEIW Trigger: CCAGATTTCTCCTATCAGCTGCATGCAGCAAGCCCAGAGTTCCCGGGCCACAGCCCAGGTGAAGCCACAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS CAA 72 bp | CCGGAACTCTGTTTCGCCAGGGCCATAGGGACTGTCTaGCCCAGCTCGTTCAAGCAGCGGTTAATTCGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PELCFARAIGTV*PSSFKQRLIRS Trigger: GGACCGAATTAACCGCTGCTTGAACGAGCTGGGCAAGACAGTCCCTATGGCCCTGGCGAAACAGAGTTCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058636.9 |
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| CDS CAA 72 bp | GCCTTGGATTGCAAGAAGGCGAGGATGCGCGCATACTaGGTGTCTTTGGTCTCCATCCGCTCCACGGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: ALDCKKARMRAY*VSLVSIRSTVV Trigger: CACCACCGTGGAGCGGATGGAGACCAAAGACACCAAGTATGCGCGCATCCTCGCCTTCTTGCAATCCAAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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| CDS CAA 90 bp | TCCAGTTTCCCGGAACTCTGTTTCGCCAGGGCCATAGGGACTGTCTaGCCCAGCTCGTTCAAGCAGCGGTTAATTCGGTCCCTCCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SSFPELCFARAIGTV*PSSFKQRLIRSLLL Trigger: GAGAAGGAGGGACCGAATTAACCGCTGCTTGAACGAGCTGGGCAAGACAGTCCCTATGGCCCTGGCGAAACAGAGTTCCGGGAAACTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058636.9 |
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| CDS TCA 72 bp | ACTTGGTGTCTTTGGTCTCCATCCGCTCCACGGTGGTaGGGTAGTGCACCAGGTTCTTCATGCACTCGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: TWCLWSPSAPRW*GSAPGSSCTRG Trigger: ACCACGAGTGCATGAAGAACCTGGTGCACTACCTCACCACCGTGGAGCGGATGGAGACCAAAGACACCAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058636.9 ENSMUST00000210652.2 |
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