Pregenerated sensors for HELQ (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035266Ensembl transcript IDs: ENSMUST00000044684.14, ENSMUST00000133845.8, ENSMUST00000151201.2, ENSMUST00000155362.2
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGGTCATCTCCAGTATGGCGCCACGGCTCCCTTCACCAATCATGTaGAACTCATCGACGACAACCAGACCCAGAGTGCTGAGCCTGCTG | + |
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Preference number: 1 (lower is better) Translates to: RVISSMAPRLPSPIM*NSSTTTRPRVLSLL Trigger: CAGCAGGCTCAGCACTCTGGGTCTGGTTGTCGTCGATGAGTTGCACATGATTGGTGAAGGGAGCCGTGGCGCCATACTGGAGATGACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151201.2 |
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| 3UTR TCA 90 bp | CACCAATCATGTGCAACTCATCGACGACAACCAGACCCAGAGTGCTaGGCCTGCTGGTTTCGATCAAGGCATTCACCAGGCTATGCGCTT | + |
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Preference number: 1 (lower is better) Translates to: HQSCATHRRQPDPEC*ACWFRSRHSPGYAL Trigger: AAGCGCATAGCCTGGTGAATGCCTTGATCGAAACCAGCAGGCTCAGCACTCTGGGTCTGGTTGTCGTCGATGAGTTGCACATGATTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151201.2 |
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| 3UTR CCA 90 bp | TTGTTTTGCTGGTGTAGAGGACTTTTGCCAGGGTCATCTCCAGTATaGCGCCACGGCTCCCTTCACCAATCATGTGCAACTCATCGACGA | + |
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Preference number: 1 (lower is better) Translates to: LFCWCRGLLPGSSPV*RHGSLHQSCATHRR Trigger: TCGTCGATGAGTTGCACATGATTGGTGAAGGGAGCCGTGGCGCCATACTGGAGATGACCCTGGCAAAAGTCCTCTACACCAGCAAAACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151201.2 |
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| 3UTR GCA 90 bp | ACTCATGCCGATAATCTGAGTTGTTTTGCTGGTGTAGAGGACTTTTaGCAGGGTCATCTCCAGTATGGCGCCACGGCTCCCTTCACCAAT | + |
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Preference number: 1 (lower is better) Translates to: THADNLSCFAGVEDF*QGHLQYGATAPFTN Trigger: ATTGGTGAAGGGAGCCGTGGCGCCATACTGGAGATGACCCTGGCAAAAGTCCTCTACACCAGCAAAACAACTCAGATTATCGGCATGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151201.2 |
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| 3UTR GCA 90 bp | AGAGTGCTGAGCCTGCTGGTTTCGATCAAGGCATTCACCAGGCTATaGGCTTTCTCGATAGTGGCGATATACAGTGATTTCTTCTCCCTC | + |
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Preference number: 1 (lower is better) Translates to: RVLSLLVSIKAFTRL*AFSIVAIYSDFFSL Trigger: GAGGGAGAAGAAATCACTGTATATCGCCACTATCGAGAAAGCGCATAGCCTGGTGAATGCCTTGATCGAAACCAGCAGGCTCAGCACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151201.2 |
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| 3UTR GCA 90 bp | ACAAAACACCAGGCAGGAGTAGTTAGGAATAACTTCTGTCACCAGTaGTACCAAGCGGTCGGGATCCATCTTCTTCAGGGCCTCAGAGTA | + |
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Preference number: 1 (lower is better) Translates to: TKHQAGVVRNNFCHQ*YQAVGIHLLQGLRV Trigger: TACTCTGAGGCCCTGAAGAAGATGGATCCCGACCGCTTGGTAGCACTGGTGACAGAAGTTATTCCTAACTACTCCTGCCTGGTGTTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151201.2 |
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| 3UTR TCA 90 bp | TCTCTTTCAGCAAAGAATAAAGCACAAACGACAGGTAGAGTCTGTTaGCAACGTTCTTGTCCACCTTCTATAAAGACACAAAAGGTGTCC | + |
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Preference number: 1 (lower is better) Translates to: SLSAKNKAQTTGRVC*QRSCPPSIKTQKVS Trigger: GGACACCTTTTGTGTCTTTATAGAAGGTGGACAAGAACGTTGTCAACAGACTCTACCTGTCGTTTGTGCTTTATTCTTTGCTGAAAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155362.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGCCAGGGTCATCTCCAGTATGGCGCCACGGCTCCCTTCACCAATCATGTGCCCAGACCCAGAGTGCTaGGCCTGCTGGTTTCGATCA | + |
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Preference number: 2 (lower is better) Translates to: FARVISSMAPRLPSPIMCPDPEC*ACWFRS Trigger: TGATCGAAACCAGCAGGCTCAGCACTCTGGGTCTGG...GCACATGATTGGTGAAGGGAGCCGTGGCGCCATACTGGAGATGACCCTGGCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151201.2 |
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| 3UTR-3UTR CCA 90 bp | CACCAGGCAGGAGTAGTTAGGAATAACTTCTGTCACCAGTGCTACCAAGCGGTCGGGTCATCTCCAGTATaGCGCCACGGCTCCCTTCAC | + |
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Preference number: 2 (lower is better) Translates to: HQAGVVRNNFCHQCYQAVGSSPV*RHGSLH Trigger: GTGAAGGGAGCCGTGGCGCCATACTGGAGATGACCC...GACCGCTTGGTAGCACTGGTGACAGAAGTTATTCCTAACTACTCCTGCCTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151201.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTATGTATCCTCGGGGCAGGTTAAACTTCTCAGACACACTCCAAACATTGGTGCGGCACAGAGCCCCTaGCCAGCCACAGAGGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: LYVSSGQVKLLRHTPNIGAAQSP*PATEES Trigger: TGACTCCTCTGTGGCTGGCCAGGGGCTCTGTGCCGC...ACCAATGTTTGGAGTGTGTCTGAGAAGTTTAACCTGCCCCGAGGATACATACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155362.2 |
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| 3UTR-3UTR CCA 90 bp | AACACGCAGGAAGAGAAGGAGGCAGCTCCCATAAGCAGGTTCTGTATGTATCCTAAAAGGTGTCCTAAGTaGGTGGGCTGTGGCTGCGGG | + |
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Preference number: 2 (lower is better) Translates to: NTQEEKEAAPISRFCMYPKRCPK*VGCGCG Trigger: CCCGCAGCCACAGCCCACCCACTTAGGACACCTTTT...AGGATACATACAGAACCTGCTTATGGGAGCTGCCTCCTTCTCTTCCTGCGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155362.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTTCTTTTGGAGACAGGGACTCATGCAGCCCAGGCTAGCCTCCAACTCTCAGGCTGAAGCTGATTTCTaGCACTCATTGTCCGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: FFFWRQGLMQPRLASNSQAEADF*HSLSVL Trigger: CAGGACGGACAATGAGTGTCAGAAATCAGCTTCAGC...CTGAGAGTTGGAGGCTAGCCTGGGCTGCATGAGTCCCTGTCTCCAAAAGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| 3UTR-3UTR CCA 90 bp | AGAGAAGGAGGCAGCTCCCATAAGCAGGTTCTGTATGTATCCTCGGGGCAGGTTACACACTCCAAACATTaGTCTCTTTCAGCAAAGAAT | + |
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Preference number: 2 (lower is better) Translates to: REGGSSHKQVLYVSSGQVTHSKH*SLSAKN Trigger: ATTCTTTGCTGAAAGAGACCAATGTTTGGAGTGTGT...AACCTGCCCCGAGGATACATACAGAACCTGCTTATGGGAGCTGCCTCCTTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155362.2 |
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| 3UTR-3UTR CCA 90 bp | TTTAAGGAACGCCTGCAGGTCTTCTACGTTGTTCAATGTTGCACTCATGCCGATTCTGAGTTGTTTTGCTaGTGTAGAGGACTTTTGCCA | + |
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Preference number: 2 (lower is better) Translates to: FKERLQVFYVVQCCTHADSELFC*CRGLLP Trigger: TGGCAAAAGTCCTCTACACCAGCAAAACAACTCAGA...ATCGGCATGAGTGCAACATTGAACAACGTAGAAGACCTGCAGGCGTTCCTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151201.2 |
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| 3UTR-3UTR TCA 90 bp | ATTTTCACAGTTCTTCTTACTGGGACAAAACACCAGGCAGGAGTAGTTAGGAATAGTGGCGATATACAGTaGTTTCTTCTCCCTCCTTTT | + |
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Preference number: 2 (lower is better) Translates to: IFTVLLTGTKHQAGVVRNSGDIQ*FLLPPF Trigger: AAAAGGAGGGAGAAGAAATCACTGTATATCGCCACT...ATTCCTAACTACTCCTGCCTGGTGTTTTGTCCCAGTAAGAAGAACTGTGAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151201.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCTTCTTACTGGGACAAAACACCAGGCAGGAGTAGTTAGGAATAACTTCTGTCTCCCTCCTTTTAATTaGAGGAAATCTTCCTTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: VLLTGTKHQAGVVRNNFCLPPFN*RKSSFA Trigger: AGCAAAGGAAGATTTCCTCCAATTAAAAGGAGGGAG...ACAGAAGTTATTCCTAACTACTCCTGCCTGGTGTTTTGTCCCAGTAAGAAGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151201.2 |
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| 3UTR GCA 72 bp | TCCAGTATGGCGCCACGGCTCCCTTCACCAATCATGTaGAACTCATCGACGACAACCAGACCCAGAGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: SSMAPRLPSPIM*NSSTTTRPRVL Trigger: CAGCACTCTGGGTCTGGTTGTCGTCGATGAGTTGCACATGATTGGTGAAGGGAGCCGTGGCGCCATACTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151201.2 |
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| 3UTR CCA 72 bp | TGGTGTAGAGGACTTTTGCCAGGGTCATCTCCAGTATaGCGCCACGGCTCCCTTCACCAATCATGTGCAACT | + |
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Preference number: 3 (lower is better) Translates to: WCRGLLPGSSPV*RHGSLHQSCAT Trigger: AGTTGCACATGATTGGTGAAGGGAGCCGTGGCGCCATACTGGAGATGACCCTGGCAAAAGTCCTCTACACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151201.2 |
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| 3UTR GCA 72 bp | CAGGCAGGAGTAGTTAGGAATAACTTCTGTCACCAGTaGTACCAAGCGGTCGGGATCCATCTTCTTCAGGGC | + |
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Preference number: 3 (lower is better) Translates to: QAGVVRNNFCHQ*YQAVGIHLLQG Trigger: GCCCTGAAGAAGATGGATCCCGACCGCTTGGTAGCACTGGTGACAGAAGTTATTCCTAACTACTCCTGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151201.2 |
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| 3UTR-3UTR CAA 90 bp | GAGAAGGAGGCAGCTCCCATAAGCAGGTTCTGTATGTATCCTCGGGGCAGGTTACTGTTGACAACGTTCTaGTCCACCTTCTATAAAGAC | + |
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Preference number: 3 (lower is better) Translates to: EKEAAPISRFCMYPRGRLLLTTF*STFYKD Trigger: GTCTTTATAGAAGGTGGACAAGAACGTTGTCAACAG...TAACCTGCCCCGAGGATACATACAGAACCTGCTTATGGGAGCTGCCTCCTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155362.2 |
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| 3UTR-3UTR CAA 90 bp | ATTTTCACAGTTCTTCTTACTGGGACAAAACACCAGGCAGGAGTAGTTAGGAATTGGTGTAGAGGACTTTaGCCAGGGTCATCTCCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: IFTVLLTGTKHQAGVVRNWCRGL*PGSSPV Trigger: TACTGGAGATGACCCTGGCAAAAGTCCTCTACACCA...ATTCCTAACTACTCCTGCCTGGTGTTTTGTCCCAGTAAGAAGAACTGTGAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151201.2 |
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| 3UTR-3UTR CAA 90 bp | ACTGGGACAAAACACCAGGCAGGAGTAGTTAGGAATAACTTCTGTCACCAGTGCTGTCTACCTCATAGATaGTGTCATTTACTTTCAGGA | + |
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Preference number: 3 (lower is better) Translates to: TGTKHQAGVVRNNFCHQCCLPHR*CHLLSG Trigger: TCCTGAAAGTAAATGACACAATCTATGAGGTAGACA...GCACTGGTGACAGAAGTTATTCCTAACTACTCCTGCCTGGTGTTTTGTCCCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151201.2 |
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| CDS-3UTR TCA 90 bp | CCTGTCTCCCGAGTGCTGCGTTACAGGTGCTCACCACTGGGCAGTTTACAACCCTCCGTGCAGGCAGATTaGCCCCTGCTGCCAGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: PVSRVLRYRCSPLGSLQPSVQAD*PLLPGW Trigger: CCACCCTGGCAGCAGGGGTCAATCTGCCTGCACGGA...GGGTTGTAAACTGCCCAGTGGTGAGCACCTGTAACGCAGCACTCGGGAGACAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR GCA 90 bp | CCTGTCTCCCGAGTGCTGCGTTACAGGTGCTCACCACTGGGCAGTTTACAACCCTGCCGCGGTTCCTTTTaGGGACAGACACCCGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: PVSRVLRYRCSPLGSLQPCRGSF*GQTPAG Trigger: GCCGGCGGGTGTCTGTCCGCAAAAGGAACCGCGGCA...GGGTTGTAAACTGCCCAGTGGTGAGCACCTGTAACGCAGCACTCGGGAGACAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR CCA 90 bp | CCTGTCTCCCGAGTGCTGCGTTACAGGTGCTCACCACTGGGCAGTTTACAACCCGGAAATGCTGGGGTCTaGGCCCTGGCATTCCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: PVSRVLRYRCSPLGSLQPGNAGV*ALAFPA Trigger: GGCTGGGAATGCCAGGGCCCAGACCCCAGCATTTCC...GGGTTGTAAACTGCCCAGTGGTGAGCACCTGTAACGCAGCACTCGGGAGACAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR TCA 90 bp | CCTGTCTCCCGAGTGCTGCGTTACAGGTGCTCACCACTGGGCAGTTTACAACCCGCAGGGACATCTAGGTaGCTCTGCTTCTGGCCGTGC | + |
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Preference number: 4 (lower is better) Translates to: PVSRVLRYRCSPLGSLQPAGTSR*LCFWPC Trigger: GCACGGCCAGAAGCAGAGTCACCTAGATGTCCCTGC...GGGTTGTAAACTGCCCAGTGGTGAGCACCTGTAACGCAGCACTCGGGAGACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR TCA 90 bp | GTAGAGGACTTTTGCCAGGGTCATCTCCAGTATGGCGCCACGGCTCCCTTCACCGCAGGGACATCTAGGTaGCTCTGCTTCTGGCCGTGC | + |
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Preference number: 4 (lower is better) Translates to: VEDFCQGHLQYGATAPFTAGTSR*LCFWPC Trigger: GCACGGCCAGAAGCAGAGTCACCTAGATGTCCCTGC...GGTGAAGGGAGCCGTGGCGCCATACTGGAGATGACCCTGGCAAAAGTCCTCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151201.2 |
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| CDS-3UTR CCA 90 bp | CCTGTCTCCCGAGTGCTGCGTTACAGGTGCTCACCACTGGGCAGTTTACAACCCGGGTCATCTCCAGTATaGCGCCACGGCTCCCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: PVSRVLRYRCSPLGSLQPGSSPV*RHGSLH Trigger: GTGAAGGGAGCCGTGGCGCCATACTGGAGATGACCC...GGGTTGTAAACTGCCCAGTGGTGAGCACCTGTAACGCAGCACTCGGGAGACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR TCA 90 bp | CCTGTCTCCCGAGTGCTGCGTTACAGGTGCTCACCACTGGGCAGTTTACAACCCCCAGACCCAGAGTGCTaGGCCTGCTGGTTTCGATCA | + |
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Preference number: 4 (lower is better) Translates to: PVSRVLRYRCSPLGSLQPPDPEC*ACWFRS Trigger: TGATCGAAACCAGCAGGCTCAGCACTCTGGGTCTGG...GGGTTGTAAACTGCCCAGTGGTGAGCACCTGTAACGCAGCACTCGGGAGACAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR GCA 90 bp | CCTGTCTCCCGAGTGCTGCGTTACAGGTGCTCACCACTGGGCAGTTTACAACCCTTTACTCCTGGGAAATaGTGGGGTCTGGGCCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: PVSRVLRYRCSPLGSLQPFTPGK*WGLGPG Trigger: GCCAGGGCCCAGACCCCAGCATTTCCCAGGAGTAAA...GGGTTGTAAACTGCCCAGTGGTGAGCACCTGTAACGCAGCACTCGGGAGACAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR GCA 90 bp | CCTGTCTCCCGAGTGCTGCGTTACAGGTGCTCACCACTGGGCAGTTTACAACCCCGGCAGAGCAGCTCTTaGAGCATTAAGATCTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: PVSRVLRYRCSPLGSLQPRQSSS*SIKISA Trigger: GGCTGAGATCTTAATGCTGCAAGAGCTGCTCTGCCG...GGGTTGTAAACTGCCCAGTGGTGAGCACCTGTAACGCAGCACTCGGGAGACAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR CCA 90 bp | CCTGTCTCCCGAGTGCTGCGTTACAGGTGCTCACCACTGGGCAGTTTACAACCCTCGGGTTGCTCTGTGTaGCTGGAGACCAACTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: PVSRVLRYRCSPLGSLQPSGCSV*LETNSS Trigger: TGAAGAGTTGGTCTCCAGCCACACAGAGCAACCCGA...GGGTTGTAAACTGCCCAGTGGTGAGCACCTGTAACGCAGCACTCGGGAGACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR CCA 90 bp | TTTTTCTTTTGGAGACAGGGACTCATGCAGCCCAGGCTAGCCTCCAACTCTCAGCTGGGGTCTGGGCCCTaGCATTCCCAGCCATGGTAC | + |
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Preference number: 4 (lower is better) Translates to: FFFWRQGLMQPRLASNSQLGSGP*HSQPWY Trigger: GTACCATGGCTGGGAATGCCAGGGCCCAGACCCCAG...CTGAGAGTTGGAGGCTAGCCTGGGCTGCATGAGTCCCTGTCTCCAAAAGAAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR CCA 90 bp | CACCAGGCAGGAGTAGTTAGGAATAACTTCTGTCACCAGTGCTACCAAGCGGTCGGAAATGCTGGGGTCTaGGCCCTGGCATTCCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: HQAGVVRNNFCHQCYQAVGNAGV*ALAFPA Trigger: GGCTGGGAATGCCAGGGCCCAGACCCCAGCATTTCC...GACCGCTTGGTAGCACTGGTGACAGAAGTTATTCCTAACTACTCCTGCCTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151201.2 |
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| CDS-3UTR CCA 90 bp | CCTGTCTCCCGAGTGCTGCGTTACAGGTGCTCACCACTGGGCAGTTTACAACCCAATTCCTCGACAAGATaGCTGCAGCAGGTCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: PVSRVLRYRCSPLGSLQPNSSTR*LQQVSR Trigger: CCTGGAGACCTGCTGCAGCCATCTTGTCGAGGAATT...GGGTTGTAAACTGCCCAGTGGTGAGCACCTGTAACGCAGCACTCGGGAGACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR GCA 90 bp | TTTTTCTTTTGGAGACAGGGACTCATGCAGCCCAGGCTAGCCTCCAACTCTCAGCCTCGACAAGATGGCTaGAGCAGGTCTCCAGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: FFFWRQGLMQPRLASNSQPRQDG*SRSPGV Trigger: GACCCCTGGAGACCTGCTGCAGCCATCTTGTCGAGG...CTGAGAGTTGGAGGCTAGCCTGGGCTGCATGAGTCCCTGTCTCCAAAAGAAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR GCA 90 bp | CCTGTCTCCCGAGTGCTGCGTTACAGGTGCTCACCACTGGGCAGTTTACAACCCGACGGCTTGTCCTGCTaGTTTCTTCCCGATAAAGCT | + |
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Preference number: 4 (lower is better) Translates to: PVSRVLRYRCSPLGSLQPDGLSC*FLPDKA Trigger: AGCTTTATCGGGAAGAAAGCAGCAGGACAAGCCGTC...GGGTTGTAAACTGCCCAGTGGTGAGCACCTGTAACGCAGCACTCGGGAGACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR CCA 90 bp | TTTGCCAGGGTCATCTCCAGTATGGCGCCACGGCTCCCTTCACCAATCATGTGCTCGGGTTGCTCTGTGTaGCTGGAGACCAACTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: FARVISSMAPRLPSPIMCSGCSV*LETNSS Trigger: TGAAGAGTTGGTCTCCAGCCACACAGAGCAACCCGA...GCACATGATTGGTGAAGGGAGCCGTGGCGCCATACTGGAGATGACCCTGGCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151201.2 |
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| CDS-3UTR TCA 90 bp | CCTGTCTCCCGAGTGCTGCGTTACAGGTGCTCACCACTGGGCAGTTTACAACCCGCCCAAAGCTTCTGGTaGGTTCTGCGGATTTTCAAA | + |
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Preference number: 4 (lower is better) Translates to: PVSRVLRYRCSPLGSLQPAQSFW*VLRIFK Trigger: TTTGAAAATCCGCAGAACTCACCAGAAGCTTTGGGC...GGGTTGTAAACTGCCCAGTGGTGAGCACCTGTAACGCAGCACTCGGGAGACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR TCA 90 bp | CCTGTCTCCCGAGTGCTGCGTTACAGGTGCTCACCACTGGGCAGTTTACAACCCTGCCGTCTGGACAGATaGTCAATTGTCTTCACCAAC | + |
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Preference number: 4 (lower is better) Translates to: PVSRVLRYRCSPLGSLQPCRLDR*SIVFTN Trigger: GTTGGTGAAGACAATTGATCATCTGTCCAGACGGCA...GGGTTGTAAACTGCCCAGTGGTGAGCACCTGTAACGCAGCACTCGGGAGACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR CCA 90 bp | GTAGAGGACTTTTGCCAGGGTCATCTCCAGTATGGCGCCACGGCTCCCTTCACCCTGAACAAAGGTCTTTaGTGCCAGAGTCTGCATCAC | + |
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Preference number: 4 (lower is better) Translates to: VEDFCQGHLQYGATAPFTLNKGL*CQSLHH Trigger: GTGATGCAGACTCTGGCACCAAAGACCTTTGTTCAG...GGTGAAGGGAGCCGTGGCGCCATACTGGAGATGACCCTGGCAAAAGTCCTCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151201.2 |
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| CDS-3UTR TCA 90 bp | CCTGTCTCCCGAGTGCTGCGTTACAGGTGCTCACCACTGGGCAGTTTACAACCCTCCAGGTCATCAACGTaGGCTAAGAAGGAACTTTCT | + |
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Preference number: 4 (lower is better) Translates to: PVSRVLRYRCSPLGSLQPSRSST*AKKELS Trigger: AGAAAGTTCCTTCTTAGCTCACGTTGATGACCTGGA...GGGTTGTAAACTGCCCAGTGGTGAGCACCTGTAACGCAGCACTCGGGAGACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR GCA 90 bp | TGTTGCACTCATGCCGATAATCTGAGTTGTTTTGCTGGTGTAGAGGACTTTTGCTGCCGCGGTTCCTTTTaGGGACAGACACCCGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: CCTHADNLSCFAGVEDFCCRGSF*GQTPAG Trigger: GCCGGCGGGTGTCTGTCCGCAAAAGGAACCGCGGCA...GCAAAAGTCCTCTACACCAGCAAAACAACTCAGATTATCGGCATGAGTGCAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000151201.2 |
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| CDS-3UTR GCA 90 bp | TTTGCCAGGGTCATCTCCAGTATGGCGCCACGGCTCCCTTCACCAATCATGTGCAACAAAGGTCTTTGGTaGCAGAGTCTGCATCACGGT | + |
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Preference number: 4 (lower is better) Translates to: FARVISSMAPRLPSPIMCNKGLW*QSLHHG Trigger: ACCGTGATGCAGACTCTGGCACCAAAGACCTTTGTT...GCACATGATTGGTGAAGGGAGCCGTGGCGCCATACTGGAGATGACCCTGGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151201.2 |
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| CDS-3UTR GCA 90 bp | CCTGTCTCCCGAGTGCTGCGTTACAGGTGCTCACCACTGGGCAGTTTACAACCCTCAGACTTTTTCTCCTaGTTGACTCTGAAGCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: PVSRVLRYRCSPLGSLQPSDFFS*LTLKQL Trigger: GAGCTGCTTCAGAGTCAAGCAGGAGAAAAAGTCTGA...GGGTTGTAAACTGCCCAGTGGTGAGCACCTGTAACGCAGCACTCGGGAGACAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR CCA 90 bp | CCTGTCTCCCGAGTGCTGCGTTACAGGTGCTCACCACTGGGCAGTTTACAACCCTGGCATTCCCAGCCATaGTACTTTTCAGATGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PVSRVLRYRCSPLGSLQPWHSQP*YFSDGL Trigger: AAGACCATCTGAAAAGTACCATGGCTGGGAATGCCA...GGGTTGTAAACTGCCCAGTGGTGAGCACCTGTAACGCAGCACTCGGGAGACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR CCA 90 bp | CCTGTCTCCCGAGTGCTGCGTTACAGGTGCTCACCACTGGGCAGTTTACAACCCTACATTCTGCTCTGTTaGGCTGAGTTGACCAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: PVSRVLRYRCSPLGSLQPYILLC*AELTKL Trigger: CAGTTTGGTCAACTCAGCCCAACAGAGCAGAATGTA...GGGTTGTAAACTGCCCAGTGGTGAGCACCTGTAACGCAGCACTCGGGAGACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR CCA 90 bp | GAAGGAGGCAGCTCCCATAAGCAGGTTCTGTATGTATCCTCGGGGCAGGTTAAATTGGGACGAGGGCCTTaGCAGATGCGGTTAGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EGGSSHKQVLYVSSGQVKLGRGP*QMRLVQ Trigger: CTGAACTAACCGCATCTGCCAAGGCCCTCGTCCCAA...TTTAACCTGCCCCGAGGATACATACAGAACCTGCTTATGGGAGCTGCCTCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155362.2 |
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| CDS-3UTR TCA 90 bp | CCTGTCTCCCGAGTGCTGCGTTACAGGTGCTCACCACTGGGCAGTTTACAACCCACCATCTGCTTGTACTaGTTCCTCTTTAAGAACGTG | + |
|
Preference number: 4 (lower is better) Translates to: PVSRVLRYRCSPLGSLQPTICLY*FLFKNV Trigger: CACGTTCTTAAAGAGGAATCAGTACAAGCAGATGGT...GGGTTGTAAACTGCCCAGTGGTGAGCACCTGTAACGCAGCACTCGGGAGACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR GCA 90 bp | TTTTTCTTTTGGAGACAGGGACTCATGCAGCCCAGGCTAGCCTCCAACTCTCAGAACTTCTGTCACCAGTaGTACCAAGCGGTCGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: FFFWRQGLMQPRLASNSQNFCHQ*YQAVGI Trigger: GATCCCGACCGCTTGGTAGCACTGGTGACAGAAGTT...CTGAGAGTTGGAGGCTAGCCTGGGCTGCATGAGTCCCTGTCTCCAAAAGAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR GCA 90 bp | GAGAAGGAGGCAGCTCCCATAAGCAGGTTCTGTATGTATCCTCGGGGCAGGTTAGACGGCTTGTCCTGCTaGTTTCTTCCCGATAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EKEAAPISRFCMYPRGRLDGLSC*FLPDKA Trigger: AGCTTTATCGGGAAGAAAGCAGCAGGACAAGCCGTC...TAACCTGCCCCGAGGATACATACAGAACCTGCTTATGGGAGCTGCCTCCTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155362.2 |
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| CDS-3UTR GCA 90 bp | TTTTTCTTTTGGAGACAGGGACTCATGCAGCCCAGGCTAGCCTCCAACTCTCAGTCTTCTGCTTCTCCTTaGAGTGCCTCCGCCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FFFWRQGLMQPRLASNSQSSASP*SASAFS Trigger: TGAGAAGGCGGAGGCACTGCAAGGAGAAGCAGAAGA...CTGAGAGTTGGAGGCTAGCCTGGGCTGCATGAGTCCCTGTCTCCAAAAGAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR TCA 90 bp | TTTTTCTTTTGGAGACAGGGACTCATGCAGCCCAGGCTAGCCTCCAACTCTCAGACGTCAGCTTCTTGGTaGGTTCCACCAAAAGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FFFWRQGLMQPRLASNSQTSASW*VPPKGL Trigger: AAGCCCTTTTGGTGGAACTCACCAAGAAGCTGACGT...CTGAGAGTTGGAGGCTAGCCTGGGCTGCATGAGTCCCTGTCTCCAAAAGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR TCA 90 bp | TTTTTCTTTTGGAGACAGGGACTCATGCAGCCCAGGCTAGCCTCCAACTCTCAGCATTGGCTAAGTGCATaGTGCTCCTGTAACCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: FFFWRQGLMQPRLASNSQHWLSA*CSCNLR Trigger: ACGCAGGTTACAGGAGCATCATGCACTTAGCCAATG...CTGAGAGTTGGAGGCTAGCCTGGGCTGCATGAGTCCCTGTCTCCAAAAGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR GCA 90 bp | CCTGTCTCCCGAGTGCTGCGTTACAGGTGCTCACCACTGGGCAGTTTACAACCCTACGTTGTTCAATGTTaGACTCATGCCGATAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: PVSRVLRYRCSPLGSLQPYVVQC*THADNL Trigger: CAGATTATCGGCATGAGTGCAACATTGAACAACGTA...GGGTTGTAAACTGCCCAGTGGTGAGCACCTGTAACGCAGCACTCGGGAGACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR CCA 90 bp | CCTGTCTCCCGAGTGCTGCGTTACAGGTGCTCACCACTGGGCAGTTTACAACCCCTCCCTCCTTTTAATTaGAGGAAATCTTCCTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PVSRVLRYRCSPLGSLQPLPPFN*RKSSFA Trigger: AGCAAAGGAAGATTTCCTCCAATTAAAAGGAGGGAG...GGGTTGTAAACTGCCCAGTGGTGAGCACCTGTAACGCAGCACTCGGGAGACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR CCA 90 bp | TTTTTCTTTTGGAGACAGGGACTCATGCAGCCCAGGCTAGCCTCCAACTCTCAGGCCTGGCTTGCCGTCTaGACAGATGATCAATTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FFFWRQGLMQPRLASNSQAWLAV*TDDQLS Trigger: AGACAATTGATCATCTGTCCAGACGGCAAGCCAGGC...CTGAGAGTTGGAGGCTAGCCTGGGCTGCATGAGTCCCTGTCTCCAAAAGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR TCA 90 bp | CCCTTCACCAATCATGTGCAACTCATCGACGACAACCAGACCCAGAGTGCTGAGTCCAGGTCATCAACGTaGGCTAAGAAGGAACTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PFTNHVQLIDDNQTQSAESRSST*AKKELS Trigger: AGAAAGTTCCTTCTTAGCTCACGTTGATGACCTGGA...CTCAGCACTCTGGGTCTGGTTGTCGTCGATGAGTTGCACATGATTGGTGAAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151201.2 |
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| CDS-3UTR TCA 90 bp | CCTGTCTCCCGAGTGCTGCGTTACAGGTGCTCACCACTGGGCAGTTTACAACCCGTACCACTCATAAACTaGTATATGTCACCAAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: PVSRVLRYRCSPLGSLQPVPLIN*YMSPRL Trigger: AAGTCTTGGTGACATATATCAGTTTATGAGTGGTAC...GGGTTGTAAACTGCCCAGTGGTGAGCACCTGTAACGCAGCACTCGGGAGACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR TCA 90 bp | TTTTTCTTTTGGAGACAGGGACTCATGCAGCCCAGGCTAGCCTCCAACTCTCAGTCTGTTGGGCTGAGTTaGCCAAACTGCTTGAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: FFFWRQGLMQPRLASNSQSVGLS*PNCLKY Trigger: GTACTTCAAGCAGTTTGGTCAACTCAGCCCAACAGA...CTGAGAGTTGGAGGCTAGCCTGGGCTGCATGAGTCCCTGTCTCCAAAAGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR GCA 90 bp | TTTTTCTTTTGGAGACAGGGACTCATGCAGCCCAGGCTAGCCTCCAACTCTCAGAACAAAGGTCTTTGGTaGCAGAGTCTGCATCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: FFFWRQGLMQPRLASNSQNKGLW*QSLHHG Trigger: ACCGTGATGCAGACTCTGGCACCAAAGACCTTTGTT...CTGAGAGTTGGAGGCTAGCCTGGGCTGCATGAGTCCCTGTCTCCAAAAGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR GCA 90 bp | CCTGTCTCCCGAGTGCTGCGTTACAGGTGCTCACCACTGGGCAGTTTACAACCCGCTTCTGGTGAGTTCTaGGGATTTTCAAAGTATAAA | + |
|
Preference number: 4 (lower is better) Translates to: PVSRVLRYRCSPLGSLQPASGEF*GFSKYK Trigger: TTTATACTTTGAAAATCCGCAGAACTCACCAGAAGC...GGGTTGTAAACTGCCCAGTGGTGAGCACCTGTAACGCAGCACTCGGGAGACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR GCA 90 bp | CCTGTCTCCCGAGTGCTGCGTTACAGGTGCTCACCACTGGGCAGTTTACAACCCAAAGATCTCTCACTTTaGTGGGTAGCGAATAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PVSRVLRYRCSPLGSLQPKDLSL*WVANKK Trigger: CTTTTTATTCGCTACCCAGCAAAGTGAGAGATCTTT...GGGTTGTAAACTGCCCAGTGGTGAGCACCTGTAACGCAGCACTCGGGAGACAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR GCA 90 bp | TTTTTCTTTTGGAGACAGGGACTCATGCAGCCCAGGCTAGCCTCCAACTCTCAGTCTGACGGCTTGTCCTaGTGCTTTCTTCCCGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: FFFWRQGLMQPRLASNSQSDGLS*CFLPDK Trigger: TTTATCGGGAAGAAAGCAGCAGGACAAGCCGTCAGA...CTGAGAGTTGGAGGCTAGCCTGGGCTGCATGAGTCCCTGTCTCCAAAAGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR CCA 90 bp | TTTTTCTTTTGGAGACAGGGACTCATGCAGCCCAGGCTAGCCTCCAACTCTCAGCTGAACAAAGGTCTTTaGTGCCAGAGTCTGCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: FFFWRQGLMQPRLASNSQLNKGL*CQSLHH Trigger: GTGATGCAGACTCTGGCACCAAAGACCTTTGTTCAG...CTGAGAGTTGGAGGCTAGCCTGGGCTGCATGAGTCCCTGTCTCCAAAAGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR CCA 90 bp | TTTTTCTTTTGGAGACAGGGACTCATGCAGCCCAGGCTAGCCTCCAACTCTCAGCACAGTTCTTCTTACTaGGACAAAACACCAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FFFWRQGLMQPRLASNSQHSSSY*DKTPGR Trigger: CCTGCCTGGTGTTTTGTCCCAGTAAGAAGAACTGTG...CTGAGAGTTGGAGGCTAGCCTGGGCTGCATGAGTCCCTGTCTCCAAAAGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR CCA 90 bp | TTTTTCTTTTGGAGACAGGGACTCATGCAGCCCAGGCTAGCCTCCAACTCTCAGGAGAGAAACAAAGCCTaGATCCCCTTGGTGAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: FFFWRQGLMQPRLASNSQERNKA*IPLVNS Trigger: GGAATTCACCAAGGGGATCCAGGCTTTGTTTCTCTC...CTGAGAGTTGGAGGCTAGCCTGGGCTGCATGAGTCCCTGTCTCCAAAAGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR CCA 90 bp | CCTGTCTCCCGAGTGCTGCGTTACAGGTGCTCACCACTGGGCAGTTTACAACCCACACACTCCAAACATTaGTCTCTTTCAGCAAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PVSRVLRYRCSPLGSLQPTHSKH*SLSAKN Trigger: ATTCTTTGCTGAAAGAGACCAATGTTTGGAGTGTGT...GGGTTGTAAACTGCCCAGTGGTGAGCACCTGTAACGCAGCACTCGGGAGACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR GCA 90 bp | GGAATAACTTCTGTCACCAGTGCTACCAAGCGGTCGGGATCCATCTTCTTCAGGTCAGACTTTTTCTCCTaGTTGACTCTGAAGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GITSVTSATKRSGSIFFRSDFFS*LTLKQL Trigger: GAGCTGCTTCAGAGTCAAGCAGGAGAAAAAGTCTGA...CCTGAAGAAGATGGATCCCGACCGCTTGGTAGCACTGGTGACAGAAGTTATTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151201.2 |
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| CDS-3UTR GCA 90 bp | GTTGTTCAATGTTGCACTCATGCCGATAATCTGAGTTGTTTTGCTGGTGTAGAGTTTACTCCTGGGAAATaGTGGGGTCTGGGCCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VVQCCTHADNLSCFAGVEFTPGK*WGLGPG Trigger: GCCAGGGCCCAGACCCCAGCATTTCCCAGGAGTAAA...CTCTACACCAGCAAAACAACTCAGATTATCGGCATGAGTGCAACATTGAACAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151201.2 |
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| CDS-3UTR GCA 90 bp | CCTGTCTCCCGAGTGCTGCGTTACAGGTGCTCACCACTGGGCAGTTTACAACCCGTTAAGCAAGTATGTTaGCAGTCATATAGCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PVSRVLRYRCSPLGSLQPVKQVC*QSYSFL Trigger: CAAAAAGCTATATGACTGGCAACATACTTGCTTAAC...GGGTTGTAAACTGCCCAGTGGTGAGCACCTGTAACGCAGCACTCGGGAGACAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR CCA 90 bp | CACCAGGCAGGAGTAGTTAGGAATAACTTCTGTCACCAGTGCTACCAAGCGGTCTGGCATTCCCAGCCATaGTACTTTTCAGATGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HQAGVVRNNFCHQCYQAVWHSQP*YFSDGL Trigger: AAGACCATCTGAAAAGTACCATGGCTGGGAATGCCA...GACCGCTTGGTAGCACTGGTGACAGAAGTTATTCCTAACTACTCCTGCCTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151201.2 |
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| CDS-3UTR CCA 90 bp | TTTCTTCTCCCTCCTTTTAATTGGAGGAAATCTTCCTTTGCTTCCAGCATATTCCTGGGGTCTGGGCCCTaGCATTCCCAGCCATGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: FLLPPFNWRKSSFASSIFLGSGP*HSQPWY Trigger: GTACCATGGCTGGGAATGCCAGGGCCCAGACCCCAG...GAATATGCTGGAAGCAAAGGAAGATTTCCTCCAATTAAAAGGAGGGAGAAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151201.2 |
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| CDS-3UTR CCA 90 bp | TTTTTCTTTTGGAGACAGGGACTCATGCAGCCCAGGCTAGCCTCCAACTCTCAGTCTTCTCTTGGACAATaGCCACATACGGAAGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: FFFWRQGLMQPRLASNSQSSLGQ*PHTEGS Trigger: TGATCCTTCCGTATGTGGCCATTGTCCAAGAGAAGA...CTGAGAGTTGGAGGCTAGCCTGGGCTGCATGAGTCCCTGTCTCCAAAAGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR CCA 90 bp | TTTTTCTTTTGGAGACAGGGACTCATGCAGCCCAGGCTAGCCTCCAACTCTCAGCTGGAAATCTTCTCTTaGACAATGGCCACATACGGA | + |
|
Preference number: 4 (lower is better) Translates to: FFFWRQGLMQPRLASNSQLEIFS*TMATYG Trigger: TCCGTATGTGGCCATTGTCCAAGAGAAGATTTCCAG...CTGAGAGTTGGAGGCTAGCCTGGGCTGCATGAGTCCCTGTCTCCAAAAGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR TCA 90 bp | TTTTTCTTTTGGAGACAGGGACTCATGCAGCCCAGGCTAGCCTCCAACTCTCAGAGTGGCGATATACAGTaGTTTCTTCTCCCTCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FFFWRQGLMQPRLASNSQSGDIQ*FLLPPF Trigger: AAAAGGAGGGAGAAGAAATCACTGTATATCGCCACT...CTGAGAGTTGGAGGCTAGCCTGGGCTGCATGAGTCCCTGTCTCCAAAAGAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR TCA 90 bp | CTGTATGTATCCTCGGGGCAGGTTAAACTTCTCAGACACACTCCAAACATTGGTTTCAGGACCTGTAAATaGCGCCAGCCAGGATTTACC | + |
|
Preference number: 4 (lower is better) Translates to: LYVSSGQVKLLRHTPNIGFRTCK*RQPGFT Trigger: GGTAAATCCTGGCTGGCGTCATTTACAGGTCCTGAA...ACCAATGTTTGGAGTGTGTCTGAGAAGTTTAACCTGCCCCGAGGATACATACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155362.2 |
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| CDS-3UTR GCA 90 bp | TCCTCGGGGCAGGTTAAACTTCTCAGACACACTCCAAACATTGGTCTCTTTCAGTCTGACGGCTTGTCCTaGTGCTTTCTTCCCGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSGQVKLLRHTPNIGLFQSDGLS*CFLPDK Trigger: TTTATCGGGAAGAAAGCAGCAGGACAAGCCGTCAGA...CTGAAAGAGACCAATGTTTGGAGTGTGTCTGAGAAGTTTAACCTGCCCCGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155362.2 |
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| CDS-3UTR CCA 90 bp | TTTTTCTTTTGGAGACAGGGACTCATGCAGCCCAGGCTAGCCTCCAACTCTCAGGATCTCTCACTTTGCTaGGTAGCGAATAAAAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FFFWRQGLMQPRLASNSQDLSLC*VANKKD Trigger: GTCCTTTTTATTCGCTACCCAGCAAAGTGAGAGATC...CTGAGAGTTGGAGGCTAGCCTGGGCTGCATGAGTCCCTGTCTCCAAAAGAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR CCA 90 bp | TTTTTCTTTTGGAGACAGGGACTCATGCAGCCCAGGCTAGCCTCCAACTCTCAGTCTGAGTTGTTTTGCTaGTGTAGAGGACTTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FFFWRQGLMQPRLASNSQSELFC*CRGLLP Trigger: TGGCAAAAGTCCTCTACACCAGCAAAACAACTCAGA...CTGAGAGTTGGAGGCTAGCCTGGGCTGCATGAGTCCCTGTCTCCAAAAGAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR TCA 90 bp | ATGTATCCTCGGGGCAGGTTAAACTTCTCAGACACACTCCAAACATTGGTCTCTTCTGTTGGGCTGAGTTaGCCAAACTGCTTGAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: MYPRGRLNFSDTLQTLVSSVGLS*PNCLKY Trigger: GTACTTCAAGCAGTTTGGTCAACTCAGCCCAACAGA...AGAGACCAATGTTTGGAGTGTGTCTGAGAAGTTTAACCTGCCCCGAGGATACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155362.2 |
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| CDS-3UTR GCA 90 bp | CCCTTCACCAATCATGTGCAACTCATCGACGACAACCAGACCCAGAGTGCTGAGAAAGATCTCTCACTTTaGTGGGTAGCGAATAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PFTNHVQLIDDNQTQSAEKDLSL*WVANKK Trigger: CTTTTTATTCGCTACCCAGCAAAGTGAGAGATCTTT...CTCAGCACTCTGGGTCTGGTTGTCGTCGATGAGTTGCACATGATTGGTGAAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151201.2 |
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| CDS-3UTR GCA 90 bp | CTGTATGTATCCTCGGGGCAGGTTAAACTTCTCAGACACACTCCAAACATTGGTCACTTGTCTCTGTTCTaGAGAGGAGAGCAGATCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LYVSSGQVKLLRHTPNIGHLSLF*RGEQIE Trigger: TTCGATCTGCTCTCCTCTGCAGAACAGAGACAAGTG...ACCAATGTTTGGAGTGTGTCTGAGAAGTTTAACCTGCCCCGAGGATACATACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155362.2 |
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| CDS-3UTR CCA 90 bp | TCCTCGGGGCAGGTTAAACTTCTCAGACACACTCCAAACATTGGTCTCTTTCAGTACATTCTGCTCTGTTaGGCTGAGTTGACCAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: SSGQVKLLRHTPNIGLFQYILLC*AELTKL Trigger: CAGTTTGGTCAACTCAGCCCAACAGAGCAGAATGTA...CTGAAAGAGACCAATGTTTGGAGTGTGTCTGAGAAGTTTAACCTGCCCCGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155362.2 |
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| CDS-3UTR GCA 90 bp | TTTTTCTTTTGGAGACAGGGACTCATGCAGCCCAGGCTAGCCTCCAACTCTCAGGGTTTAGATAGTCCTTaGTTAAAAACTTGCACAACA | + |
|
Preference number: 4 (lower is better) Translates to: FFFWRQGLMQPRLASNSQGLDSP*LKTCTT Trigger: TGTTGTGCAAGTTTTTAAGCAAGGACTATCTAAACC...CTGAGAGTTGGAGGCTAGCCTGGGCTGCATGAGTCCCTGTCTCCAAAAGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR CCA 90 bp | TTTTTCTTTTGGAGACAGGGACTCATGCAGCCCAGGCTAGCCTCCAACTCTCAGATGGTACTTTTCAGATaGTCTTTCAGACTTTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FFFWRQGLMQPRLASNSQMVLFR*SFRLFL Trigger: GAGAAAAAGTCTGAAAGACCATCTGAAAAGTACCAT...CTGAGAGTTGGAGGCTAGCCTGGGCTGCATGAGTCCCTGTCTCCAAAAGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR CCA 90 bp | TTTAAGGAACGCCTGCAGGTCTTCTACGTTGTTCAATGTTGCACTCATGCCGATGATCTCTCACTTTGCTaGGTAGCGAATAAAAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FKERLQVFYVVQCCTHADDLSLC*VANKKD Trigger: GTCCTTTTTATTCGCTACCCAGCAAAGTGAGAGATC...ATCGGCATGAGTGCAACATTGAACAACGTAGAAGACCTGCAGGCGTTCCTTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151201.2 |
||
| CDS-3UTR CCA 90 bp | TTTTTCTTTTGGAGACAGGGACTCATGCAGCCCAGGCTAGCCTCCAACTCTCAGCAAAACTCGATAAACTaGAAATCTTCTCTTGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: FFFWRQGLMQPRLASNSQQNSIN*KSSLGQ Trigger: TTGTCCAAGAGAAGATTTCCAGTTTATCGAGTTTTG...CTGAGAGTTGGAGGCTAGCCTGGGCTGCATGAGTCCCTGTCTCCAAAAGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS CCA 90 bp | CGGCGGCTCCCGGCTGCAGCTTCGTCCTCCGTGTCCTCGGCAGGCTaGAGCTCGGCCGGGGTCGGGGAGGCACGGAGGTTCTCCAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RRLPAAASSSVSSAG*SSAGVGEARRFSRL Trigger: CAACCTGGAGAACCTCCGTGCCTCCCCGACCCCGGCCGAGCTCCAGCCTGCCGAGGACACGGAGGACGAAGCTGCAGCCGGGAGCCGCCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 ENSMUST00000151201.2 |
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| CDS-3UTR CAA 90 bp | CCTGTCTCCCGAGTGCTGCGTTACAGGTGCTCACCACTGGGCAGTTTACAACCCTTGCCGCGGTTCCTTTaGCGGACAGACACCCGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: PVSRVLRYRCSPLGSLQPLPRFL*RTDTRR Trigger: CCGGCGGGTGTCTGTCCGCAAAAGGAACCGCGGCAA...GGGTTGTAAACTGCCCAGTGGTGAGCACCTGTAACGCAGCACTCGGGAGACAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS GCA 90 bp | CTCCTCAGACAGGAGCGCCTCTCTGAGGTGTTTACTCCTGGGAAATaGTGGGGTCTGGGCCCTGGCATTCCCAGCCATGGTACTTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLRQERLSEVFTPGK*WGLGPGIPSHGTFQ Trigger: CTGAAAAGTACCATGGCTGGGAATGCCAGGGCCCAGACCCCAGCATTTCCCAGGAGTAAACACCTCAGAGAGGCGCTCCTGTCTGAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 ENSMUST00000151201.2 |
||
| CDS-3UTR CAA 90 bp | CCTGTCTCCCGAGTGCTGCGTTACAGGTGCTCACCACTGGGCAGTTTACAACCCATTATTTGGCTCGGGTaGCTCTGTGTGGCTGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: PVSRVLRYRCSPLGSLQPIIWLG*LCVAGD Trigger: GTCTCCAGCCACACAGAGCAACCCGAGCCAAATAAT...GGGTTGTAAACTGCCCAGTGGTGAGCACCTGTAACGCAGCACTCGGGAGACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
||
| CDS CCA 90 bp | AGGAGCGCCTCTCTGAGGTGTTTACTCCTGGGAAATGCTGGGGTCTaGGCCCTGGCATTCCCAGCCATGGTACTTTTCAGATGGTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RSASLRCLLLGNAGV*ALAFPAMVLFRWSF Trigger: GAAAGACCATCTGAAAAGTACCATGGCTGGGAATGCCAGGGCCCAGACCCCAGCATTTCCCAGGAGTAAACACCTCAGAGAGGCGCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 ENSMUST00000151201.2 |
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| CDS CCA 90 bp | GAGAGAAACAAAGCCTGGATCCCCTTGGTGAATTCCTCGACAAGATaGCTGCAGCAGGTCTCCAGGGGTCCGCTTATGAGTTCCAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: ERNKAWIPLVNSSTR*LQQVSRGPLMSSRT Trigger: GGTCCTGGAACTCATAAGCGGACCCCTGGAGACCTGCTGCAGCCATCTTGTCGAGGAATTCACCAAGGGGATCCAGGCTTTGTTTCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 |
||
| CDS-3UTR CAA 90 bp | CCTGTCTCCCGAGTGCTGCGTTACAGGTGCTCACCACTGGGCAGTTTACAACCCTGGTGTAGAGGACTTTaGCCAGGGTCATCTCCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: PVSRVLRYRCSPLGSLQPWCRGL*PGSSPV Trigger: TACTGGAGATGACCCTGGCAAAAGTCCTCTACACCA...GGGTTGTAAACTGCCCAGTGGTGAGCACCTGTAACGCAGCACTCGGGAGACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
||
| CDS TCA 90 bp | AACGAAAGATCGCTTCCAGGTTCTGGTTCAGCAGGGACATCTAGGTaGCTCTGCTTCTGGCCGTGCTCACTAGTTTCCGGGTCAGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: NERSLPGSGSAGTSR*LCFWPCSLVSGSVR Trigger: CCTCACTGACCCGGAAACTAGTGAGCACGGCCAGAAGCAGAGTCACCTAGATGTCCCTGCTGAACCAGAACCTGGAAGCGATCTTTCGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 ENSMUST00000151201.2 |
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| CDS GCA 90 bp | GGCCCTGAACTTGCTGACTGGAATCTTTCTGACGGCTTGTCCTGCTaGTTTCTTCCCGATAAAGCTTTCGGAGACTCCGAGAAGAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: GPELADWNLSDGLSC*FLPDKAFGDSEKSG Trigger: GCCGCTCTTCTCGGAGTCTCCGAAAGCTTTATCGGGAAGAAAGCAGCAGGACAAGCCGTCAGAAAGATTCCAGTCAGCAAGTTCAGGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155362.2 |
||
| CDS GCA 90 bp | CCGGGCCCTGAACTTGCTGACTGGAATCTTTCTGACGGCTTGTCCTaGTGCTTTCTTCCCGATAAAGCTTTCGGAGACTCCGAGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PGPELADWNLSDGLS*CFLPDKAFGDSEKS Trigger: GCTCTTCTCGGAGTCTCCGAAAGCTTTATCGGGAAGAAAGCAGCAGGACAAGCCGTCAGAAAGATTCCAGTCAGCAAGTTCAGGGCCCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155362.2 |
||
| CDS CCA 90 bp | CTGCTTCTCCTTGCAGTGCCTCCGCCTTCTCATGCAACAGCATCTTaGCTGAGGAAACAATCTGCCTGGCTTGCCGTCTGGACAGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: LLLLAVPPPSHATAS*LRKQSAWLAVWTDD Trigger: ATCATCTGTCCAGACGGCAAGCCAGGCAGATTGTTTCCTCAGCCAAGATGCTGTTGCATGAGAAGGCGGAGGCACTGCAAGGAGAAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 |
||
| CDS-3UTR CAA 90 bp | CCTGTCTCCCGAGTGCTGCGTTACAGGTGCTCACCACTGGGCAGTTTACAACCCCTGTTGACAACGTTCTaGTCCACCTTCTTTCTGACG | + |
|
Preference number: 5 (lower is better) Translates to: PVSRVLRYRCSPLGSLQPLLTTF*STFFLT Trigger: CGTCAGAAAGAAGGTGGACAAGAACGTTGTCAACAG...GGGTTGTAAACTGCCCAGTGGTGAGCACCTGTAACGCAGCACTCGGGAGACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
||
| CDS-3UTR CAA 90 bp | CCTGTCTCCCGAGTGCTGCGTTACAGGTGCTCACCACTGGGCAGTTTACAACCCGTAGTAACTCTGAGGTaGTTTTTGAGGCCTGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: PVSRVLRYRCSPLGSLQPVVTLR*FLRPAE Trigger: TTCAGCAGGCCTCAAAAACAACCTCAGAGTTACTAC...GGGTTGTAAACTGCCCAGTGGTGAGCACCTGTAACGCAGCACTCGGGAGACAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
||
| CDS-3UTR CAA 90 bp | CCTGTCTCCCGAGTGCTGCGTTACAGGTGCTCACCACTGGGCAGTTTACAACCCTGCAGGTCTTCTACGTaGTTCAATGTTGCACTCATG | + |
|
Preference number: 5 (lower is better) Translates to: PVSRVLRYRCSPLGSLQPCRSST*FNVALM Trigger: CATGAGTGCAACATTGAACAACGTAGAAGACCTGCA...GGGTTGTAAACTGCCCAGTGGTGAGCACCTGTAACGCAGCACTCGGGAGACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
||
| CDS-3UTR CAA 90 bp | TTTTTCTTTTGGAGACAGGGACTCATGCAGCCCAGGCTAGCCTCCAACTCTCAGTTCTTCTGCTTCTCCTaGCAGTGCCTCCGCCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FFFWRQGLMQPRLASNSQFFCFS*QCLRLL Trigger: GAGAAGGCGGAGGCACTGCAAGGAGAAGCAGAAGAA...CTGAGAGTTGGAGGCTAGCCTGGGCTGCATGAGTCCCTGTCTCCAAAAGAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
||
| CDS-3UTR CAA 90 bp | AACACGCAGGAAGAGAAGGAGGCAGCTCCCATAAGCAGGTTCTGTATGTATCCTCTTGGGACGAGGGCCTaGGCAGATGCGGTTAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: NTQEEKEAAPISRFCMYPLGTRA*ADAVSS Trigger: TGAACTAACCGCATCTGCCAAGGCCCTCGTCCCAAG...AGGATACATACAGAACCTGCTTATGGGAGCTGCCTCCTTCTCTTCCTGCGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155362.2 |
||
| CDS TCA 90 bp | TCTTCAGACCAATTAAAGAGAGAAACAAAGCCTGGATCCCCTTGGTaGATTCCTCGACAAGATGGCTGCAGCAGGTCTCCAGGGGTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SSDQLKRETKPGSPW*IPRQDGCSRSPGVR Trigger: GCGGACCCCTGGAGACCTGCTGCAGCCATCTTGTCGAGGAATTCACCAAGGGGATCCAGGCTTTGTTTCTCTCTTTAATTGGTCTGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 |
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| CDS TCA 90 bp | TATATAGCTGTTTTGCTCGACCCTCTAAGACCCCGGTCACTTCCATaGGAGGGATTAGCTCCGCCTTCACGCAGTACGTCAGCTTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: YIAVLLDPLRPRSLP*EGLAPPSRSTSASW Trigger: CCAAGAAGCTGACGTACTGCGTGAAGGCGGAGCTAATCCCTCTCATGGAAGTGACCGGGGTCTTAGAGGGTCGAGCAAAACAGCTATATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
||
| CDS TCA 90 bp | TTCTCCTTGCAGTGCCTCCGCCTTCTCATGCAACAGCATCTTGGCTaGGGAAACAATCTGCCTGGCTTGCCGTCTGGACAGATGATCAAT | + |
|
Preference number: 5 (lower is better) Translates to: FSLQCLRLLMQQHLG*GNNLPGLPSGQMIN Trigger: ATTGATCATCTGTCCAGACGGCAAGCCAGGCAGATTGTTTCCTCAGCCAAGATGCTGTTGCATGAGAAGGCGGAGGCACTGCAAGGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 |
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| CDS GCA 90 bp | CTCAGTAATTCTTCTGCTTCTCCTTGCAGTGCCTCCGCCTTCTCATaGAACAGCATCTTGGCTGAGGAAACAATCTGCCTGGCTTGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: LSNSSASPCSASAFS*NSILAEETICLACR Trigger: ACGGCAAGCCAGGCAGATTGTTTCCTCAGCCAAGATGCTGTTGCATGAGAAGGCGGAGGCACTGCAAGGAGAAGCAGAAGAATTACTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 |
||
| CDS-3UTR CAA 90 bp | CCTGTCTCCCGAGTGCTGCGTTACAGGTGCTCACCACTGGGCAGTTTACAACCCGGAGGAAATCTTCCTTaGCTTCCAGCATATTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PVSRVLRYRCSPLGSLQPGGNLP*LPAYSS Trigger: TGAAGAATATGCTGGAAGCAAAGGAAGATTTCCTCC...GGGTTGTAAACTGCCCAGTGGTGAGCACCTGTAACGCAGCACTCGGGAGACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR CAA 90 bp | CCTGTCTCCCGAGTGCTGCGTTACAGGTGCTCACCACTGGGCAGTTTACAACCCGGACACACTTTACCATaGCCGATATTCCTCAAACTT | + |
|
Preference number: 5 (lower is better) Translates to: PVSRVLRYRCSPLGSLQPGHTLP*PIFLKL Trigger: AAGTTTGAGGAATATCGGCAATGGTAAAGTGTGTCC...GGGTTGTAAACTGCCCAGTGGTGAGCACCTGTAACGCAGCACTCGGGAGACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
||
| CDS-3UTR CAA 90 bp | CCTGTCTCCCGAGTGCTGCGTTACAGGTGCTCACCACTGGGCAGTTTACAACCCGACACACTCCAAACATaGGTCTCTTTCAGCAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PVSRVLRYRCSPLGSLQPDTLQT*VSFSKE Trigger: TTCTTTGCTGAAAGAGACCAATGTTTGGAGTGTGTC...GGGTTGTAAACTGCCCAGTGGTGAGCACCTGTAACGCAGCACTCGGGAGACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR CAA 90 bp | AAAATTCCTCCAGCTCCTCACAGAAATGTAACACGCAGGAAGAGAAGGAGGCAGCCCCGGGCCCTGAACTaGCTGACTGGAATCTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KIPPAPHRNVTRRKRRRQPRALN*LTGIFL Trigger: CAGAAAGATTCCAGTCAGCAAGTTCAGGGCCCGGGG...CTGCCTCCTTCTCTTCCTGCGTGTTACATTTCTGTGAGGAGCTGGAGGAATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155362.2 |
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| CDS-3UTR CAA 90 bp | TTTTTCTTTTGGAGACAGGGACTCATGCAGCCCAGGCTAGCCTCCAACTCTCAGGCTGAACAAAGGTCTTaGGTGCCAGAGTCTGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: FFFWRQGLMQPRLASNSQAEQRS*VPESAS Trigger: TGATGCAGACTCTGGCACCAAAGACCTTTGTTCAGC...CTGAGAGTTGGAGGCTAGCCTGGGCTGCATGAGTCCCTGTCTCCAAAAGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR CAA 90 bp | CCTGTCTCCCGAGTGCTGCGTTACAGGTGCTCACCACTGGGCAGTTTACAACCCTTTTCCCGCCACTCGTaGGCAAGGAATATATTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: PVSRVLRYRCSPLGSLQPFSRHS*ARNILN Trigger: ATTTAATATATTCCTTGCCAACGAGTGGCGGGAAAA...GGGTTGTAAACTGCCCAGTGGTGAGCACCTGTAACGCAGCACTCGGGAGACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR CAA 90 bp | TTTTTCTTTTGGAGACAGGGACTCATGCAGCCCAGGCTAGCCTCCAACTCTCAGAAAGCCTGGATCCCCTaGGTGAATTCCTCGACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: FFFWRQGLMQPRLASNSQKAWIP*VNSSTR Trigger: TCTTGTCGAGGAATTCACCAAGGGGATCCAGGCTTT...CTGAGAGTTGGAGGCTAGCCTGGGCTGCATGAGTCCCTGTCTCCAAAAGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR CAA 90 bp | TTTTTCTTTTGGAGACAGGGACTCATGCAGCCCAGGCTAGCCTCCAACTCTCAGCAGTACGTCAGCTTCTaGGTGAGTTCCACCAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: FFFWRQGLMQPRLASNSQQYVSF*VSSTKR Trigger: CCTTTTGGTGGAACTCACCAAGAAGCTGACGTACTG...CTGAGAGTTGGAGGCTAGCCTGGGCTGCATGAGTCCCTGTCTCCAAAAGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS CCA 90 bp | CCGCCTTCTCATGCAACAGCATCTTGGCTGAGGAAACAATCTGCCTaGCTTGCCGTCTGGACAGATGATCAATTGTCTTCACCAACACTT | + |
|
Preference number: 5 (lower is better) Translates to: PPSHATASWLRKQSA*LAVWTDDQLSSPTL Trigger: AAGTGTTGGTGAAGACAATTGATCATCTGTCCAGACGGCAAGCCAGGCAGATTGTTTCCTCAGCCAAGATGCTGTTGCATGAGAAGGCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 |
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| CDS-3UTR CAA 90 bp | TTTCTTCTCCCTCCTTTTAATTGGAGGAAATCTTCCTTTGCTTCCAGCATATTCTTGCCGCGGTTCCTTTaGCGGACAGACACCCGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: FLLPPFNWRKSSFASSIFLPRFL*RTDTRR Trigger: CCGGCGGGTGTCTGTCCGCAAAAGGAACCGCGGCAA...GAATATGCTGGAAGCAAAGGAAGATTTCCTCCAATTAAAAGGAGGGAGAAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151201.2 |
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| CDS-3UTR CAA 90 bp | CCTGTCTCCCGAGTGCTGCGTTACAGGTGCTCACCACTGGGCAGTTTACAACCCTGTCTACCTCATAGATaGTGTCATTTACTTTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PVSRVLRYRCSPLGSLQPCLPHR*CHLLSG Trigger: TCCTGAAAGTAAATGACACAATCTATGAGGTAGACA...GGGTTGTAAACTGCCCAGTGGTGAGCACCTGTAACGCAGCACTCGGGAGACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS-3UTR CAA 90 bp | TTTTTCTTTTGGAGACAGGGACTCATGCAGCCCAGGCTAGCCTCCAACTCTCAGTCATGCAACAGCATCTaGGCTGAGGAAACAATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FFFWRQGLMQPRLASNSQSCNSI*AEETIC Trigger: GCAGATTGTTTCCTCAGCCAAGATGCTGTTGCATGA...CTGAGAGTTGGAGGCTAGCCTGGGCTGCATGAGTCCCTGTCTCCAAAAGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS TCA 90 bp | ATGGCTCCCTTAAAAGAAGCTTGGCCCAGTTTCGTAATCCGGAAGTaGCACTCTAACCCCTCATTGTCGCCACAGCTGTCTTTCTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: MAPLKEAWPSFVIRK*HSNPSLSPQLSFCR Trigger: TCTACAGAAAGACAGCTGTGGCGACAATGAGGGGTTAGAGTGTCACTTCCGGATTACGAAACTGGGCCAAGCTTCTTTTAAGGGAGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 ENSMUST00000155362.2 |
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| CDS TCA 90 bp | ATCTTGGCTGAGGAAACAATCTGCCTGGCTTGCCGTCTGGACAGATaGTCAATTGTCTTCACCAACACTTCTGGGTTGGCATTGGCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: ILAEETICLACRLDR*SIVFTNTSGLALAK Trigger: CTTAGCCAATGCCAACCCAGAAGTGTTGGTGAAGACAATTGATCATCTGTCCAGACGGCAAGCCAGGCAGATTGTTTCCTCAGCCAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 |
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| CDS GCA 90 bp | TACGGAAGGATCATTAAGACATCTTTCTGTCGGCAGAGCAGCTCTTaGAGCATTAAGATCTCAGCCACAAGGGTTTTCCCGCCACTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: YGRIIKTSFCRQSSS*SIKISATRVFPPLV Trigger: AACGAGTGGCGGGAAAACCCTTGTGGCTGAGATCTTAATGCTGCAAGAGCTGCTCTGCCGACAGAAAGATGTCTTAATGATCCTTCCGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 |
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| CDS TCA 90 bp | CAATTGTCTTCACCAACACTTCTGGGTTGGCATTGGCTAAGTGCATaGTGCTCCTGTAACCTGCGTTATATAGCTGTTTTGCTCGACCCT | + |
|
Preference number: 5 (lower is better) Translates to: QLSSPTLLGWHWLSA*CSCNLRYIAVLLDP Trigger: AGGGTCGAGCAAAACAGCTATATAACGCAGGTTACAGGAGCATCATGCACTTAGCCAATGCCAACCCAGAAGTGTTGGTGAAGACAATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 |
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| CDS-3UTR CAA 90 bp | CTGCTACATTTTCACAGTTCTTCTTACTGGGACAAAACACCAGGCAGGAGTAGTGCTGAACAAAGGTCTTaGGTGCCAGAGTCTGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: LLHFHSSSYWDKTPGRSSAEQRS*VPESAS Trigger: TGATGCAGACTCTGGCACCAAAGACCTTTGTTCAGC...ACTACTCCTGCCTGGTGTTTTGTCCCAGTAAGAAGAACTGTGAAAATGTAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151201.2 |
||
| CDS-3UTR CAA 90 bp | AACATTTCTGCTACATTTTCACAGTTCTTCTTACTGGGACAAAACACCAGGCAGATTATTTGGCTCGGGTaGCTCTGTGTGGCTGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: NISATFSQFFLLGQNTRQIIWLG*LCVAGD Trigger: GTCTCCAGCCACACAGAGCAACCCGAGCCAAATAAT...CTGCCTGGTGTTTTGTCCCAGTAAGAAGAACTGTGAAAATGTAGCAGAAATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151201.2 |
||
| CDS-3UTR CAA 90 bp | TTTTTCTTTTGGAGACAGGGACTCATGCAGCCCAGGCTAGCCTCCAACTCTCAGTCCTTGCTTAAAAACTaGCACAACATTTCTGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: FFFWRQGLMQPRLASNSQSLLKN*HNISAT Trigger: TGTAGCAGAAATGTTGTGCAAGTTTTTAAGCAAGGA...CTGAGAGTTGGAGGCTAGCCTGGGCTGCATGAGTCCCTGTCTCCAAAAGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
||
| CDS-3UTR CAA 90 bp | CTCTTTCAGCAAAGAATAAAGCACAAACGACAGGTAGAGTCTGTTGACAACGTTAATCTTTCTGACGGCTaGTCCTGCTGCTTTCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LFQQRIKHKRQVESVDNVNLSDG*SCCFLP Trigger: GGGAAGAAAGCAGCAGGACAAGCCGTCAGAAAGATT...AACGTTGTCAACAGACTCTACCTGTCGTTTGTGCTTTATTCTTTGCTGAAAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155362.2 |
||
| CDS TCA 90 bp | CAGATCTTAGCGTTAAGCAAGTATGTTGCCAGTCATATAGCTTTTTaGTTCCTTTCAATTGAACGTAAAGATCTCTCACTTTGCTGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: QILALSKYVASHIAF*FLSIERKDLSLCWV Trigger: TACCCAGCAAAGTGAGAGATCTTTACGTTCAATTGAAAGGAATCAAAAAGCTATATGACTGGCAACATACTTGCTTAACGCTAAGATCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 |
||
| CDS GCA 72 bp | CTCCGGGCTCCCGGTTTTCCGGCGGCGGCTCCCGGCTaGAGCTTCGTCCTCCGTGTCCTCGGCAGGCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LRAPGFPAAAPG*SFVLRVLGRLE Trigger: CTCCAGCCTGCCGAGGACACGGAGGACGAAGCTGCAGCCGGGAGCCGCCGCCGGAAAACCGGGAGCCCGGAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 ENSMUST00000151201.2 |
||
| CDS CCA 72 bp | CCGGCTGCAGCTTCGTCCTCCGTGTCCTCGGCAGGCTaGAGCTCGGCCGGGGTCGGGGAGGCACGGAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: PAAASSSVSSAG*SSAGVGEARRF Trigger: GAACCTCCGTGCCTCCCCGACCCCGGCCGAGCTCCAGCCTGCCGAGGACACGGAGGACGAAGCTGCAGCCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 ENSMUST00000151201.2 |
||
| CDS GCA 72 bp | AGGCACGGAGGTTCTCCAGGTTGCCGCGGTTCCTTTTaGGGACAGACACCCGCCGGCGGATGCGGGGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: RHGGSPGCRGSF*GQTPAGGCGDS Trigger: GCTGTCCCCGCATCCGCCGGCGGGTGTCTGTCCGCAAAAGGAACCGCGGCAACCTGGAGAACCTCCGTGCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 ENSMUST00000151201.2 |
||
| CDS CAA 72 bp | GAGGCACGGAGGTTCTCCAGGTTGCCGCGGTTCCTTTaGCGGACAGACACCCGCCGGCGGATGCGGGGACAG | + |
|
Preference number: 6 (lower is better) Translates to: EARRFSRLPRFL*RTDTRRRMRGQ Trigger: CTGTCCCCGCATCCGCCGGCGGGTGTCTGTCCGCAAAAGGAACCGCGGCAACCTGGAGAACCTCCGTGCCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 ENSMUST00000151201.2 |
||
| CDS GCA 72 bp | CCAAACATGTCCTCTTCGCTGTCATTTTCCTGGGCGTaGTCCGGGCTCCCGGTTTTCCGGCGGCGGCTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: PNMSSSLSFSWA*SGLPVFRRRLP Trigger: CGGGAGCCGCCGCCGGAAAACCGGGAGCCCGGAGCACGCCCAGGAAAATGACAGCGAAGAGGACATGTTTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 ENSMUST00000151201.2 |
||
| CDS GCA 72 bp | GGACCTGCTGCTTGTCCTTCTCTTGCAGCAGAAGGATaGTCTCCCCGGCAGTGTCTATCCCAGCGCGGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: GPAACPSLAAEG*SPRQCLSQRGR Trigger: CCGGCCGCGCTGGGATAGACACTGCCGGGGAGAGCATCCTTCTGCTGCAAGAGAAGGACAAGCAGCAGGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 |
||
| CDS GCA 72 bp | CAGGAGCGCCTCTCTGAGGTGTTTACTCCTGGGAAATaGTGGGGTCTGGGCCCTGGCATTCCCAGCCATGGT | + |
|
Preference number: 6 (lower is better) Translates to: QERLSEVFTPGK*WGLGPGIPSHG Trigger: ACCATGGCTGGGAATGCCAGGGCCCAGACCCCAGCATTTCCCAGGAGTAAACACCTCAGAGAGGCGCTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 ENSMUST00000151201.2 |
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| CDS CAA 90 bp | CAGGGGTCCGCTTATGAGTTCCAGGACCTGCTGCTTGTCCTTCTCTaGCAGCAGAAGGATGCTCTCCCCGGCAGTGTCTATCCCAGCGCG | + |
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Preference number: 6 (lower is better) Translates to: QGSAYEFQDLLLVLL*QQKDALPGSVYPSA Trigger: CGCGCTGGGATAGACACTGCCGGGGAGAGCATCCTTCTGCTGCAAGAGAAGGACAAGCAGCAGGTCCTGGAACTCATAAGCGGACCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 |
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| CDS CCA 72 bp | GAGCGCCTCTCTGAGGTGTTTACTCCTGGGAAATGCTaGGGTCTGGGCCCTGGCATTCCCAGCCATGGTACT | + |
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Preference number: 6 (lower is better) Translates to: ERLSEVFTPGKC*GLGPGIPSHGT Trigger: AGTACCATGGCTGGGAATGCCAGGGCCCAGACCCCAGCATTTCCCAGGAGTAAACACCTCAGAGAGGCGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 ENSMUST00000151201.2 |
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| CDS CCA 72 bp | GGGTGGACGTGCAGGTCAAGAGACAGAGCACGCCTGTaGAGTAAGCCTCTTCCAGAAGCTTCCGCTCTTCGC | + |
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Preference number: 6 (lower is better) Translates to: GWTCRSRDRARL*SKPLPEASALR Trigger: GCGAAGAGCGGAAGCTTCTGGAAGAGGCTTACTCCACAGGCGTGCTCTGTCTCTTGACCTGCACGTCCACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 |
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| CDS GCA 72 bp | TCTCCCCGGCAGTGTCTATCCCAGCGCGGCCGGCCCTaGCAACCATCTGCTTGTACTGATTCCTCTTTAAGA | + |
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Preference number: 6 (lower is better) Translates to: SPRQCLSQRGRP*QPSACTDSSLR Trigger: TCTTAAAGAGGAATCAGTACAAGCAGATGGTTGGCAGGGCCGGCCGCGCTGGGATAGACACTGCCGGGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 |
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| CDS CAA 72 bp | TCCAGGGGTCCGCTTATGAGTTCCAGGACCTGCTGCTaGTCCTTCTCTTGCAGCAGAAGGATGCTCTCCCCG | + |
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Preference number: 6 (lower is better) Translates to: SRGPLMSSRTCC*SFSCSRRMLSP Trigger: CGGGGAGAGCATCCTTCTGCTGCAAGAGAAGGACAAGCAGCAGGTCCTGGAACTCATAAGCGGACCCCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 |
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| CDS TCA 72 bp | CAAGATGGCTGCAGCAGGTCTCCAGGGGTCCGCTTATaGGTTCCAGGACCTGCTGCTTGTCCTTCTCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: QDGCSRSPGVRL*VPGPAACPSLA Trigger: TGCAAGAGAAGGACAAGCAGCAGGTCCTGGAACTCATAAGCGGACCCCTGGAGACCTGCTGCAGCCATCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 |
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| CDS TCA 72 bp | CAGTGCCTCCGCCTTCTCATGCAACAGCATCTTGGCTaGGGAAACAATCTGCCTGGCTTGCCGTCTGGACAG | + |
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Preference number: 6 (lower is better) Translates to: QCLRLLMQQHLG*GNNLPGLPSGQ Trigger: CTGTCCAGACGGCAAGCCAGGCAGATTGTTTCCTCAGCCAAGATGCTGTTGCATGAGAAGGCGGAGGCACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 |
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| CDS GCA 72 bp | AACCGCTGTGGTGATAGGCGATGCCGAAAGGGACGGTaGGCTTCAGGACAGGACACACTTTACCATTGCCGA | + |
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Preference number: 6 (lower is better) Translates to: NRCGDRRCRKGR*ASGQDTLYHCR Trigger: TCGGCAATGGTAAAGTGTGTCCTGTCCTGAAGCGCACCGTCCCTTTCGGCATCGCCTATCACCACAGCGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 |
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| CDS GCA 72 bp | GTCTCCAGGGGTCCGCTTATGAGTTCCAGGACCTGCTaGTTGTCCTTCTCTTGCAGCAGAAGGATGCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: VSRGPLMSSRTC*LSFSCSRRMLS Trigger: GGAGAGCATCCTTCTGCTGCAAGAGAAGGACAAGCAGCAGGTCCTGGAACTCATAAGCGGACCCCTGGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 |
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| CDS GCA 72 bp | CAGGTCTCCAGGGGTCCGCTTATGAGTTCCAGGACCTaGTGCTTGTCCTTCTCTTGCAGCAGAAGGATGCTC | + |
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Preference number: 6 (lower is better) Translates to: QVSRGPLMSSRT*CLSFSCSRRML Trigger: GAGCATCCTTCTGCTGCAAGAGAAGGACAAGCAGCAGGTCCTGGAACTCATAAGCGGACCCCTGGAGACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 |
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| CDS CCA 72 bp | AAAGCCTGGATCCCCTTGGTGAATTCCTCGACAAGATaGCTGCAGCAGGTCTCCAGGGGTCCGCTTATGAGT | + |
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Preference number: 6 (lower is better) Translates to: KAWIPLVNSSTR*LQQVSRGPLMS Trigger: ACTCATAAGCGGACCCCTGGAGACCTGCTGCAGCCATCTTGTCGAGGAATTCACCAAGGGGATCCAGGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 |
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| CDS CAA 72 bp | AATGACGCCAGCCAGGATTTACCCCGGGCCCTGAACTaGCTGACTGGAATCTTTCTGACGGCTTGTCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: NDASQDLPRALN*LTGIFLTACPA Trigger: AGCAGGACAAGCCGTCAGAAAGATTCCAGTCAGCAAGTTCAGGGCCCGGGGTAAATCCTGGCTGGCGTCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155362.2 |
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| CDS CCA 72 bp | GGTGTTTACTCCTGGGAAATGCTGGGGTCTGGGCCCTaGCATTCCCAGCCATGGTACTTTTCAGATGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: GVYSWEMLGSGP*HSQPWYFSDGL Trigger: AAGACCATCTGAAAAGTACCATGGCTGGGAATGCCAGGGCCCAGACCCCAGCATTTCCCAGGAGTAAACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 ENSMUST00000151201.2 |
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| CDS CAA 72 bp | GCTTATGAGTTCCAGGACCTGCTGCTTGTCCTTCTCTaGCAGCAGAAGGATGCTCTCCCCGGCAGTGTCTAT | + |
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Preference number: 6 (lower is better) Translates to: AYEFQDLLLVLL*QQKDALPGSVY Trigger: ATAGACACTGCCGGGGAGAGCATCCTTCTGCTGCAAGAGAAGGACAAGCAGCAGGTCCTGGAACTCATAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 |
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| CDS CAA 90 bp | TTTACCCCGGGCCCTGAACTTGCTGACTGGAATCTTTCTGACGGCTaGTCCTGCTGCTTTCTTCCCGATAAAGCTTTCGGAGACTCCGAG | + |
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Preference number: 6 (lower is better) Translates to: FTPGPELADWNLSDG*SCCFLPDKAFGDSE Trigger: CTCGGAGTCTCCGAAAGCTTTATCGGGAAGAAAGCAGCAGGACAAGCCGTCAGAAAGATTCCAGTCAGCAAGTTCAGGGCCCGGGGTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155362.2 |
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| CDS GCA 72 bp | TCTTCTGCTTCTCCTTGCAGTGCCTCCGCCTTCTCATaGAACAGCATCTTGGCTGAGGAAACAATCTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: SSASPCSASAFS*NSILAEETICL Trigger: CAGGCAGATTGTTTCCTCAGCCAAGATGCTGTTGCATGAGAAGGCGGAGGCACTGCAAGGAGAAGCAGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 |
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| CDS GCA 72 bp | CTGTTTTGCTCGACCCTTTCTGACGGCTTGTCCTGCTaGTTTCTTCCCGATAAAGCTTTCGGAGACTCCGAG | + |
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Preference number: 6 (lower is better) Translates to: LFCSTLSDGLSC*FLPDKAFGDSE Trigger: CTCGGAGTCTCCGAAAGCTTTATCGGGAAGAAAGCAGCAGGACAAGCCGTCAGAAAGGGTCGAGCAAAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133845.8 |
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| CDS CAA 72 bp | GCCAGAGTCTGCATCACGGTCCCCACATTCAGGCAGTaGCATATATCTCTGTTCCAGGTCATCAACGTGAGC | + |
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Preference number: 6 (lower is better) Translates to: ARVCITVPTFRQ*HISLFQVINVS Trigger: GCTCACGTTGATGACCTGGAACAGAGATATATGCAACTGCCTGAATGTGGGGACCGTGATGCAGACTCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 ENSMUST00000151201.2 |
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| CDS TCA 72 bp | AGAAGAGCGGCTACATTCTGCTCTGTTGGGCTGAGTTaGCCAAACTGCTTGAAGTACACCATCCAGTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: RRAATFCSVGLS*PNCLKYTIQSG Trigger: GCCTGACTGGATGGTGTACTTCAAGCAGTTTGGTCAACTCAGCCCAACAGAGCAGAATGTAGCCGCTCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 ENSMUST00000155362.2 |
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| CDS GCA 72 bp | GTTCTTGTCCACCTTCTTTCTGACGGCTTGTCCTGCTaGTTTCTTCCCGATAAAGCTTTCGGAGACTCCGAG | + |
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Preference number: 6 (lower is better) Translates to: VLVHLLSDGLSC*FLPDKAFGDSE Trigger: CTCGGAGTCTCCGAAAGCTTTATCGGGAAGAAAGCAGCAGGACAAGCCGTCAGAAAGAAGGTGGACAAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS GCA 72 bp | CTTGCTGACTGGAATCTTTCTGACGGCTTGTCCTGCTaGTTTCTTCCCGATAAAGCTTTCGGAGACTCCGAG | + |
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Preference number: 6 (lower is better) Translates to: LADWNLSDGLSC*FLPDKAFGDSE Trigger: CTCGGAGTCTCCGAAAGCTTTATCGGGAAGAAAGCAGCAGGACAAGCCGTCAGAAAGATTCCAGTCAGCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155362.2 |
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| CDS CCA 72 bp | GGAGACTCCGAGAAGAGCGGCTACATTCTGCTCTGTTaGGCTGAGTTGACCAAACTGCTTGAAGTACACCAT | + |
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Preference number: 6 (lower is better) Translates to: GDSEKSGYILLC*AELTKLLEVHH Trigger: ATGGTGTACTTCAAGCAGTTTGGTCAACTCAGCCCAACAGAGCAGAATGTAGCCGCTCTTCTCGGAGTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 ENSMUST00000155362.2 |
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| CDS CAA 72 bp | CTGAGGTTGTTTTTGAGGCCTGCTGAACAAAGGTCTTaGGTGCCAGAGTCTGCATCACGGTCCCCACATTCA | + |
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Preference number: 6 (lower is better) Translates to: LRLFLRPAEQRS*VPESASRSPHS Trigger: TGAATGTGGGGACCGTGATGCAGACTCTGGCACCAAAGACCTTTGTTCAGCAGGCCTCAAAAACAACCTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 ENSMUST00000151201.2 |
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| CDS CAA 72 bp | GAGAAGAGCGGCTACATTCTGCTCTGTTGGGCTGAGTaGACCAAACTGCTTGAAGTACACCATCCAGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: EKSGYILLCWAE*TKLLEVHHPVR Trigger: CCTGACTGGATGGTGTACTTCAAGCAGTTTGGTCAACTCAGCCCAACAGAGCAGAATGTAGCCGCTCTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 ENSMUST00000155362.2 |
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| CDS CAA 72 bp | GGCCCTGAACTTGCTGACTGGAATCTTTCTGACGGCTaGTCCTGCTGCTTTCTTCCCGATAAAGCTTTCGGA | + |
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Preference number: 6 (lower is better) Translates to: GPELADWNLSDG*SCCFLPDKAFG Trigger: TCCGAAAGCTTTATCGGGAAGAAAGCAGCAGGACAAGCCGTCAGAAAGATTCCAGTCAGCAAGTTCAGGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155362.2 |
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| CDS GCA 72 bp | AACGTTCTTGTCCACCTTCTTTCTGACGGCTTGTCCTaGTGCTTTCTTCCCGATAAAGCTTTCGGAGACTCC | + |
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Preference number: 6 (lower is better) Translates to: NVLVHLLSDGLS*CFLPDKAFGDS Trigger: GGAGTCTCCGAAAGCTTTATCGGGAAGAAAGCAGCAGGACAAGCCGTCAGAAAGAAGGTGGACAAGAACGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS GCA 72 bp | GAACTTGCTGACTGGAATCTTTCTGACGGCTTGTCCTaGTGCTTTCTTCCCGATAAAGCTTTCGGAGACTCC | + |
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Preference number: 6 (lower is better) Translates to: ELADWNLSDGLS*CFLPDKAFGDS Trigger: GGAGTCTCCGAAAGCTTTATCGGGAAGAAAGCAGCAGGACAAGCCGTCAGAAAGATTCCAGTCAGCAAGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155362.2 |
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| CDS TCA 72 bp | CAATTAAAGAGAGAAACAAAGCCTGGATCCCCTTGGTaGATTCCTCGACAAGATGGCTGCAGCAGGTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: QLKRETKPGSPW*IPRQDGCSRSP Trigger: TGGAGACCTGCTGCAGCCATCTTGTCGAGGAATTCACCAAGGGGATCCAGGCTTTGTTTCTCTCTTTAATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 |
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| CDS CCA 72 bp | AGAAGTCATTATTTGGCTCGGGTTGCTCTGTGTGGCTaGAGACCAACTCTTCATGTGATGACTTCTGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: RSHYLARVALCG*RPTLHVMTSVG Trigger: ACCCACAGAAGTCATCACATGAAGAGTTGGTCTCCAGCCACACAGAGCAACCCGAGCCAAATAATGACTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 ENSMUST00000151201.2 |
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| CDS CCA 72 bp | CATGCAACAGCATCTTGGCTGAGGAAACAATCTGCCTaGCTTGCCGTCTGGACAGATGATCAATTGTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: HATASWLRKQSA*LAVWTDDQLSS Trigger: TGAAGACAATTGATCATCTGTCCAGACGGCAAGCCAGGCAGATTGTTTCCTCAGCCAAGATGCTGTTGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 |
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| CDS CAA 72 bp | AGACCAATTAAAGAGAGAAACAAAGCCTGGATCCCCTaGGTGAATTCCTCGACAAGATGGCTGCAGCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: RPIKERNKAWIP*VNSSTRWLQQV Trigger: GACCTGCTGCAGCCATCTTGTCGAGGAATTCACCAAGGGGATCCAGGCTTTGTTTCTCTCTTTAATTGGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 |
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| CDS TCA 72 bp | TACAGTAGTAACTCTGAGGTTGTTTTTGAGGCCTGCTaGACAAAGGTCTTTGGTGCCAGAGTCTGCATCACG | + |
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Preference number: 6 (lower is better) Translates to: YSSNSEVVFEAC*TKVFGARVCIT Trigger: CGTGATGCAGACTCTGGCACCAAAGACCTTTGTTCAGCAGGCCTCAAAAACAACCTCAGAGTTACTACTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 ENSMUST00000151201.2 |
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| CDS TCA 72 bp | TTAGCTCCGCCTTCACGCAGTACGTCAGCTTCTTGGTaGGTTCCACCAAAAGGGCTTTGTAAACCCAAAATT | + |
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Preference number: 6 (lower is better) Translates to: LAPPSRSTSASW*VPPKGLCKPKI Trigger: AATTTTGGGTTTACAAAGCCCTTTTGGTGGAACTCACCAAGAAGCTGACGTACTGCGTGAAGGCGGAGCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044684.14 |
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| CDS GCA 72 bp | ATCATTAAGACATCTTTCTGTCGGCAGAGCAGCTCTTaGAGCATTAAGATCTCAGCCACAAGGGTTTTCCCG | + |
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Preference number: 6 (lower is better) Translates to: IIKTSFCRQSSS*SIKISATRVFP Trigger: CGGGAAAACCCTTGTGGCTGAGATCTTAATGCTGCAAGAGCTGCTCTGCCGACAGAAAGATGTCTTAATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 |
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| CDS CAA 72 bp | GGGACGGTGCGCTTCAGGACAGGACACACTTTACCATaGCCGATATTCCTCAAACTTTTAATCACTTCGCAT | + |
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Preference number: 6 (lower is better) Translates to: GTVRFRTGHTLP*PIFLKLLITSH Trigger: ATGCGAAGTGATTAAAAGTTTGAGGAATATCGGCAATGGTAAAGTGTGTCCTGTCCTGAAGCGCACCGTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 |
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| CDS TCA 72 bp | TCACCAACACTTCTGGGTTGGCATTGGCTAAGTGCATaGTGCTCCTGTAACCTGCGTTATATAGCTGTTTTG | + |
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Preference number: 6 (lower is better) Translates to: SPTLLGWHWLSA*CSCNLRYIAVL Trigger: CAAAACAGCTATATAACGCAGGTTACAGGAGCATCATGCACTTAGCCAATGCCAACCCAGAAGTGTTGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 |
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| CDS CAA 72 bp | GGGTCAGTGAGGTTGATTACAGTAGTAACTCTGAGGTaGTTTTTGAGGCCTGCTGAACAAAGGTCTTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: GSVRLITVVTLR*FLRPAEQRSLV Trigger: CACCAAAGACCTTTGTTCAGCAGGCCTCAAAAACAACCTCAGAGTTACTACTGTAATCAACCTCACTGACCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 ENSMUST00000151201.2 |
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| CDS CCA 72 bp | TCTATACCAAAACTCGATAAACTGGAAATCTTCTCTTaGACAATGGCCACATACGGAAGGATCATTAAGACA | + |
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Preference number: 6 (lower is better) Translates to: SIPKLDKLEIFS*TMATYGRIIKT Trigger: TGTCTTAATGATCCTTCCGTATGTGGCCATTGTCCAAGAGAAGATTTCCAGTTTATCGAGTTTTGGTATAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 |
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| CDS CAA 72 bp | TTCTTCTCCCTCCTTTTAATTGGAGGAAATCTTCCTTaGCTTCCAGCATATTCTTCAACAAAGAAACCAAGT | + |
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Preference number: 6 (lower is better) Translates to: FFSLLLIGGNLP*LPAYSSTKKPS Trigger: ACTTGGTTTCTTTGTTGAAGAATATGCTGGAAGCAAAGGAAGATTTCCTCCAATTAAAAGGAGGGAGAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 |
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| CDS TCA 72 bp | GCGTTAAGCAAGTATGTTGCCAGTCATATAGCTTTTTaGTTCCTTTCAATTGAACGTAAAGATCTCTCACTT | + |
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Preference number: 6 (lower is better) Translates to: ALSKYVASHIAF*FLSIERKDLSL Trigger: AAGTGAGAGATCTTTACGTTCAATTGAAAGGAATCAAAAAGCTATATGACTGGCAACATACTTGCTTAACGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044684.14 ENSMUST00000133845.8 |
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