Pregenerated sensors for HELLS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025001Ensembl transcript IDs: ENSMUST00000025965.12, ENSMUST00000145051.2
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGGAGGCAGGAGGGTCGGTAGTTCAGGGTCATTCTTGGCAAATGTaGAGCCAGCCCAGGAGACCCTGTCACAGAAGCAATAAACAAGCA | + |
|
Preference number: 1 (lower is better) Translates to: VEAGGSVVQGHSWQM*SQPRRPCHRSNKQA Trigger: TGCTTGTTTATTGCTTCTGTGACAGGGTCTCCTGGGCTGGCTTCACATTTGCCAAGAATGACCCTGAACTACCGACCCTCCTGCCTCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| 3UTR CCA 90 bp | AAAAAGAAAGTGAATCATCTAAAAGTTAACACCATACATGTGTGGTaGAGCAAGCCTGCAATGCCTGCACTTGATGGGTGGAGGCAGGAG | + |
|
Preference number: 1 (lower is better) Translates to: KKKVNHLKVNTIHVW*SKPAMPALDGWRQE Trigger: CTCCTGCCTCCACCCATCAAGTGCAGGCATTGCAGGCTTGCTCCACCACACATGTATGGTGTTAACTTTTAGATGATTCACTTTCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| 3UTR GCA 90 bp | CTTTGTGGCTGGTATGCTCCCTTAATTTGTATCCTGAGTTTCTTATaGATATCGCTCTGGTTGTATCCGCATCCCTTCTATAAATTCTCC | + |
|
Preference number: 1 (lower is better) Translates to: LCGWYAPLICILSFL*ISLWLYPHPFYKFS Trigger: GGAGAATTTATAGAAGGGATGCGGATACAACCAGAGCGATATGCATAAGAAACTCAGGATACAAATTAAGGGAGCATACCAGCCACAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| 3UTR CAA 90 bp | CACTTGATGGGTGGAGGCAGGAGGGTCGGTAGTTCAGGGTCATTCTaGGCAAATGTGAAGCCAGCCCAGGAGACCCTGTCACAGAAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: HLMGGGRRVGSSGSF*ANVKPAQETLSQKQ Trigger: TTGCTTCTGTGACAGGGTCTCCTGGGCTGGCTTCACATTTGCCAAGAATGACCCTGAACTACCGACCCTCCTGCCTCCACCCATCAAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| 3UTR-3UTR TCA 90 bp | GTGTGGTGGAGCAAGCCTGCAATGCCTGCACTTGATGGGTGGAGGCAGGAGGGTGCAAGACTAACCAAATaGAAAACCAAAATGGGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: VWWSKPAMPALDGWRQEGARLTK*KTKMGW Trigger: CCAGCCCATTTTGGTTTTTCATTTGGTTAGTCTTGC...ACCCTCCTGCCTCCACCCATCAAGTGCAGGCATTGCAGGCTTGCTCCACCACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| 3UTR-3UTR TCA 90 bp | ATGTGTGGTGGAGCAAGCCTGCAATGCCTGCACTTGATGGGTGGAGGCAGGAGGGAAGCAAATAGATCTTaGAAAGTCCTAACCCAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: MCGGASLQCLHLMGGGRREANRS*KVLTQP Trigger: AGGCTGGGTTAGGACTTTTCAAGATCTATTTGCTTC...CCTCCTGCCTCCACCCATCAAGTGCAGGCATTGCAGGCTTGCTCCACCACACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| 3UTR-3UTR GCA 90 bp | GTGTGGTGGAGCAAGCCTGCAATGCCTGCACTTGATGGGTGGAGGCAGGAGGGTTACACTTTTCTGACATaGAAATCTTCTATTGACTCC | + |
|
Preference number: 2 (lower is better) Translates to: VWWSKPAMPALDGWRQEGYTFLT*KSSIDS Trigger: GGAGTCAATAGAAGATTTGCATGTCAGAAAAGTGTA...ACCCTCCTGCCTCCACCCATCAAGTGCAGGCATTGCAGGCTTGCTCCACCACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| 3UTR-3UTR GCA 90 bp | ATGTGTGGTGGAGCAAGCCTGCAATGCCTGCACTTGATGGGTGGAGGCAGGAGGATCTTACATTTTCTTTaGGCCTTCCTGCTAAAATCT | + |
|
Preference number: 2 (lower is better) Translates to: MCGGASLQCLHLMGGGRRILHFL*AFLLKS Trigger: AGATTTTAGCAGGAAGGCGCAAAGAAAATGTAAGAT...CCTCCTGCCTCCACCCATCAAGTGCAGGCATTGCAGGCTTGCTCCACCACACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| 3UTR CAA 90 bp | TTTCAGGGGCTAAAAAGACAGCTCAGCAGTGCTCTTCCAAAGGACTaGTGTTTGTTTCTCAGCAACAATGTCAGGAAGCTAATAACCTAC | + |
|
Preference number: 2 (lower is better) Translates to: FQGLKRQLSSALPKD*CLFLSNNVRKLITY Trigger: GTAGGTTATTAGCTTCCTGACATTGTTGCTGAGAAACAAACACAAGTCCTTTGGAAGAGCACTGCTGAGCTGTCTTTTTAGCCCCTGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| 3UTR-3UTR GCA 90 bp | CTAACCCAGCCTGATCTACAGAATGAGTTCAAGGACTACAGAGAAACCTGTCTTTCTTTGTGGCTGGTATaGTCCCTTAATTTGTATCCT | + |
|
Preference number: 2 (lower is better) Translates to: LTQPDLQNEFKDYRETCLSLWLV*SLNLYP Trigger: AGGATACAAATTAAGGGAGCATACCAGCCACAAAGA...AAGACAGGTTTCTCTGTAGTCCTTGAACTCATTCTGTAGATCAGGCTGGGTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| 3UTR-3UTR CCA 90 bp | AAAGACAGCTCAGCAGTGCTCTTCCAAAGGACTTGTGTTTGTTTCTCAGCAACATGTTCTCTTTGTGGCTaGTATGCTCCCTTAATTTGT | + |
|
Preference number: 2 (lower is better) Translates to: KDSSAVLFQRTCVCFSATCSLCG*YAPLIC Trigger: ACAAATTAAGGGAGCATACCAGCCACAAAGAGAACA...TGTTGCTGAGAAACAAACACAAGTCCTTTGGAAGAGCACTGCTGAGCTGTCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| 3UTR TCA 72 bp | ACATGTGTGGTGGAGCAAGCCTGCAATGCCTGCACTTaGTGGGTGGAGGCAGGAGGGTCGGTAGTTCAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: TCVVEQACNACT*WVEAGGSVVQG Trigger: ACCCTGAACTACCGACCCTCCTGCCTCCACCCATCAAGTGCAGGCATTGCAGGCTTGCTCCACCACACATGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| 3UTR GCA 72 bp | TTAACACCATACATGTGTGGTGGAGCAAGCCTGCAATaGCTGCACTTGATGGGTGGAGGCAGGAGGGTCGGT | + |
|
Preference number: 3 (lower is better) Translates to: LTPYMCGGASLQ*LHLMGGGRRVG Trigger: ACCGACCCTCCTGCCTCCACCCATCAAGTGCAGGCATTGCAGGCTTGCTCCACCACACATGTATGGTGTTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| 3UTR TCA 72 bp | GGAGGGTCGGTAGTTCAGGGTCATTCTTGGCAAATGTaGAGCCAGCCCAGGAGACCCTGTCACAGAAGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: GGSVVQGHSWQM*SQPRRPCHRSN Trigger: ATTGCTTCTGTGACAGGGTCTCCTGGGCTGGCTTCACATTTGCCAAGAATGACCCTGAACTACCGACCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| 3UTR GCA 72 bp | GGCTGGAGAGATGGCTCAGAGGTTCTGAGCACTGACTaGTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: GWRDGSEVLSTD*SSRGPEFNSQQ Trigger: TTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCAGAACCTCTGAGCCATCTCTCCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| 3UTR-3UTR CAA 90 bp | GTGTGGTGGAGCAAGCCTGCAATGCCTGCACTTGATGGGTGGAGGCAGGAGGGTGTATGCTCCCTTAATTaGTATCCTGAGTTTCTTATG | + |
|
Preference number: 3 (lower is better) Translates to: VWWSKPAMPALDGWRQEGVCSLN*YPEFLM Trigger: CATAAGAAACTCAGGATACAAATTAAGGGAGCATAC...ACCCTCCTGCCTCCACCCATCAAGTGCAGGCATTGCAGGCTTGCTCCACCACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| 3UTR TCA 72 bp | AAACCAAAATGGGCTGGAGAGATGGCTCAGAGGTTCTaGGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: KPKWAGEMAQRF*ALTALPEVLSS Trigger: TGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCAGAACCTCTGAGCCATCTCTCCAGCCCATTTTGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| 3UTR GCA 72 bp | GTACAAGGCTCTGGGTTCCTTAACACTAAATATGGATaGCTCCCAAGAGCTGTTACCCCAGAAAGGAAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: VQGSGFLNTKYG*LPRAVTPERKG Trigger: TCCTTTCCTTTCTGGGGTAACAGCTCTTGGGAGGCATCCATATTTAGTGTTAAGGAACCCAGAGCCTTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| 3UTR TCA 72 bp | TCAGACGCCTACTCCATAACTGAAGTCCAAATCCCATaGATTACATTACTAAAGGGGGTGGGGGAGACACTA | + |
|
Preference number: 3 (lower is better) Translates to: SDAYSITEVQIP*ITLLKGVGETL Trigger: TAGTGTCTCCCCCACCCCCTTTAGTAATGTAATTCATGGGATTTGGACTTCAGTTATGGAGTAGGCGTCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| 3UTR TCA 72 bp | CTTCTTCACTGTCATATAATCTCCTGGGCAGGGCCTTaGTTGTTCTCTTTGTGGCTGGTATGCTCCCTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: LLHCHIISWAGP*LFSLWLVCSLN Trigger: ATTAAGGGAGCATACCAGCCACAAAGAGAACAATCAAGGCCCTGCCCAGGAGATTATATGACAGTGAAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| 3UTR CCA 72 bp | TCTCCTGGGCAGGGCCTTGATTGTTCTCTTTGTGGCTaGTATGCTCCCTTAATTTGTATCCTGAGTTTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: SPGQGLDCSLCG*YAPLICILSFL Trigger: TAAGAAACTCAGGATACAAATTAAGGGAGCATACCAGCCACAAAGAGAACAATCAAGGCCCTGCCCAGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| 3UTR CCA 72 bp | AAAGTGAATCATCTAAAAGTTAACACCATACATGTGTaGTGGAGCAAGCCTGCAATGCCTGCACTTGATGGG | + |
|
Preference number: 3 (lower is better) Translates to: KVNHLKVNTIHV*WSKPAMPALDG Trigger: CCCATCAAGTGCAGGCATTGCAGGCTTGCTCCACCACACATGTATGGTGTTAACTTTTAGATGATTCACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| 3UTR CCA 72 bp | TTAATTTGTATCCTGAGTTTCTTATGCATATCGCTCTaGTTGTATCCGCATCCCTTCTATAAATTCTCCATT | + |
|
Preference number: 3 (lower is better) Translates to: LICILSFLCISL*LYPHPFYKFSI Trigger: AATGGAGAATTTATAGAAGGGATGCGGATACAACCAGAGCGATATGCATAAGAAACTCAGGATACAAATTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| 3UTR CAA 72 bp | GGTGGAGGCAGGAGGGTCGGTAGTTCAGGGTCATTCTaGGCAAATGTGAAGCCAGCCCAGGAGACCCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GGGRRVGSSGSF*ANVKPAQETLS Trigger: TGACAGGGTCTCCTGGGCTGGCTTCACATTTGCCAAGAATGACCCTGAACTACCGACCCTCCTGCCTCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| 3UTR CAA 72 bp | TACATGTGTGGTGGAGCAAGCCTGCAATGCCTGCACTaGATGGGTGGAGGCAGGAGGGTCGGTAGTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: YMCGGASLQCLH*MGGGRRVGSSG Trigger: CCCTGAACTACCGACCCTCCTGCCTCCACCCATCAAGTGCAGGCATTGCAGGCTTGCTCCACCACACATGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR GCA 90 bp | ATGTGTGGTGGAGCAAGCCTGCAATGCCTGCACTTGATGGGTGGAGGCAGGAGGCTGCAGTCAAGTTTATaGCTAAACCACCAGCTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: MCGGASLQCLHLMGGGRRLQSSL*LNHQLV Trigger: CACGAGCTGGTGGTTTAGGCATAAACTTGACTGCAG...CCTCCTGCCTCCACCCATCAAGTGCAGGCATTGCAGGCTTGCTCCACCACACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR CCA 90 bp | ATGTGTGGTGGAGCAAGCCTGCAATGCCTGCACTTGATGGGTGGAGGCAGGAGGGGTACCGAATTTCAGTaGACTCTCTGTCCCAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: MCGGASLQCLHLMGGGRRGTEFQ*TLCPKT Trigger: AGTCTTGGGACAGAGAGTCCACTGAAATTCGGTACC...CCTCCTGCCTCCACCCATCAAGTGCAGGCATTGCAGGCTTGCTCCACCACACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR TCA 90 bp | ATGTGTGGTGGAGCAAGCCTGCAATGCCTGCACTTGATGGGTGGAGGCAGGAGGATTGTAGCAATGCACTaGACAGTCTTTCCCAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: MCGGASLQCLHLMGGGRRIVAMH*TVFPKP Trigger: GGGTTTGGGAAAGACTGTTCAGTGCATTGCTACAAT...CCTCCTGCCTCCACCCATCAAGTGCAGGCATTGCAGGCTTGCTCCACCACACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR TCA 90 bp | ATGTGTGGTGGAGCAAGCCTGCAATGCCTGCACTTGATGGGTGGAGGCAGGAGGACCGTTTTAACTCCCTaGTTAGCCGGCACTTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: MCGGASLQCLHLMGGGRRTVLTP*LAGTSY Trigger: ATATGAAGTGCCGGCTAATCAGGGAGTTAAAACGGT...CCTCCTGCCTCCACCCATCAAGTGCAGGCATTGCAGGCTTGCTCCACCACACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR TCA 90 bp | GTGTGGTGGAGCAAGCCTGCAATGCCTGCACTTGATGGGTGGAGGCAGGAGGGTCCTTCATTTGATCAATaGGATCACTTCGATCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: VWWSKPAMPALDGWRQEGPSFDQ*DHFDPT Trigger: TGTTGGATCGAAGTGATCTCATTGATCAAATGAAGG...ACCCTCCTGCCTCCACCCATCAAGTGCAGGCATTGCAGGCTTGCTCCACCACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR TCA 90 bp | GTGTGGTGGAGCAAGCCTGCAATGCCTGCACTTGATGGGTGGAGGCAGGAGGGTCTTGAAGCCTTCATTTaGTCAATGAGATCACTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: VWWSKPAMPALDGWRQEGLEAFI*SMRSLR Trigger: TCGAAGTGATCTCATTGATCAAATGAAGGCTTCAAG...ACCCTCCTGCCTCCACCCATCAAGTGCAGGCATTGCAGGCTTGCTCCACCACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR TCA 90 bp | ATGTGTGGTGGAGCAAGCCTGCAATGCCTGCACTTGATGGGTGGAGGCAGGAGGCCCTTTAATTGGTCTTaGAGCCTTCATTTGATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: MCGGASLQCLHLMGGGRRPFNWS*SLHLIN Trigger: ATTGATCAAATGAAGGCTTCAAGACCAATTAAAGGG...CCTCCTGCCTCCACCCATCAAGTGCAGGCATTGCAGGCTTGCTCCACCACACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR TCA 90 bp | AGAAAGGAAAGGATGACTCTGTTCAAGATTAGCCTGGTGGTAGTGGTGCACGCAAAATGCTTTGGTTGTTaGAAGGGTACAGGCTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: RKERMTLFKISLVVVVHAKCFGC*KGTGCP Trigger: CGGACAGCCTGTACCCTTTCAACAACCAAAGCATTT...TGCGTGCACCACTACCACCAGGCTAATCTTGAACAGAGTCATCCTTTCCTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR TCA 90 bp | AGAAAGGAAAGGATGACTCTGTTCAAGATTAGCCTGGTGGTAGTGGTGCACGCACTGTCCCAAGACTTTTaGGCCTCTTCTAACATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RKERMTLFKISLVVVVHALSQDF*ASSNIF Trigger: GAAGATGTTAGAAGAGGCTCAAAAGTCTTGGGACAG...TGCGTGCACCACTACCACCAGGCTAATCTTGAACAGAGTCATCCTTTCCTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR CCA 90 bp | AGAAAGGAAAGGATGACTCTGTTCAAGATTAGCCTGGTGGTAGTGGTGCACGCATCCATGCCTTCTACTTaGTACCACCTCATTACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RKERMTLFKISLVVVVHASMPST*YHLITP Trigger: AGGAGTAATGAGGTGGTACCAAGTAGAAGGCATGGA...TGCGTGCACCACTACCACCAGGCTAATCTTGAACAGAGTCATCCTTTCCTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR GCA 90 bp | CTAACCCAGCCTGATCTACAGAATGAGTTCAAGGACTACAGAGAAACCTGTCTTGCAAATGCTGAAGTCTaGGGTACCGAATTTCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LTQPDLQNEFKDYRETCLANAEV*GTEFQW Trigger: CCACTGAAATTCGGTACCGCAGACTTCAGCATTTGC...AAGACAGGTTTCTCTGTAGTCCTTGAACTCATTCTGTAGATCAGGCTGGGTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR TCA 90 bp | CTAACCCAGCCTGATCTACAGAATGAGTTCAAGGACTACAGAGAAACCTGTCTTTTTTCAAGCAAATGCTaGAGTCTGCGGTACCGAATT | + |
|
Preference number: 4 (lower is better) Translates to: LTQPDLQNEFKDYRETCLFSSKC*SLRYRI Trigger: AATTCGGTACCGCAGACTTCAGCATTTGCTTGAAAA...AAGACAGGTTTCTCTGTAGTCCTTGAACTCATTCTGTAGATCAGGCTGGGTTAG 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR TCA 90 bp | CTAACCCAGCCTGATCTACAGAATGAGTTCAAGGACTACAGAGAAACCTGTCTTCATGCTTGTCATTTGTaGAAACACCAGAACCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LTQPDLQNEFKDYRETCLHACHL*KHQNLV Trigger: CACAAGGTTCTGGTGTTTTCACAAATGACAAGCATG...AAGACAGGTTTCTCTGTAGTCCTTGAACTCATTCTGTAGATCAGGCTGGGTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR GCA 90 bp | AGAAAGGAAAGGATGACTCTGTTCAAGATTAGCCTGGTGGTAGTGGTGCACGCATTCTGTTCCTCCAATTaGTGTTGTTCCATTTTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RKERMTLFKISLVVVVHAFCSSN*CCSILV Trigger: GACTAAAATGGAACAACAGCAATTGGAGGAACAGAA...TGCGTGCACCACTACCACCAGGCTAATCTTGAACAGAGTCATCCTTTCCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR GCA 90 bp | GGTAAACTCAGGATTTCTTCTTCACTGTCATATAATCTCCTGGGCAGGGCCTTGCCTCTGAATCATCAATaGAATTGTAGCAATGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GKLRISSSLSYNLLGRALPLNHQ*NCSNAL Trigger: CAGTGCATTGCTACAATTGCATTGATGATTCAGAGG...CAAGGCCCTGCCCAGGAGATTATATGACAGTGAAGAAGAAATCCTGAGTTTACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR GCA 90 bp | GGTAAACTCAGGATTTCTTCTTCACTGTCATATAATCTCCTGGGCAGGGCCTTGAATGATCACTGTATCTaGTGCAGTCAAGTTTATGCC | + |
|
Preference number: 4 (lower is better) Translates to: GKLRISSSLSYNLLGRALNDHCI*CSQVYA Trigger: GGCATAAACTTGACTGCAGCAGATACAGTGATCATT...CAAGGCCCTGCCCAGGAGATTATATGACAGTGAAGAAGAAATCCTGAGTTTACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR GCA 90 bp | AGAAAGGAAAGGATGACTCTGTTCAAGATTAGCCTGGTGGTAGTGGTGCACGCACTGGTCAATAGTATTTaGTGTTACAAGACGATACAC | + |
|
Preference number: 4 (lower is better) Translates to: RKERMTLFKISLVVVVHALVNSI*CYKTIH Trigger: GTGTATCGTCTTGTAACAGCAAATACTATTGACCAG...TGCGTGCACCACTACCACCAGGCTAATCTTGAACAGAGTCATCCTTTCCTTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| 3UTR CAA 72 bp | CTAAAAAGACAGCTCAGCAGTGCTCTTCCAAAGGACTaGTGTTTGTTTCTCAGCAACAATGTCAGGAAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LKRQLSSALPKD*CLFLSNNVRKL Trigger: TAGCTTCCTGACATTGTTGCTGAGAAACAAACACAAGTCCTTTGGAAGAGCACTGCTGAGCTGTCTTTTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR GCA 90 bp | AGAAAGGAAAGGATGACTCTGTTCAAGATTAGCCTGGTGGTAGTGGTGCACGCATCTGATAAATTGTTTTaGAAGGGAGTACCAGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RKERMTLFKISLVVVVHASDKLF*KGVPVK Trigger: TTTGACTGGTACTCCCTTGCAAAACAATTTATCAGA...TGCGTGCACCACTACCACCAGGCTAATCTTGAACAGAGTCATCCTTTCCTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR GCA 90 bp | GGTAAACTCAGGATTTCTTCTTCACTGTCATATAATCTCCTGGGCAGGGCCTTGGGCGTTAAAATCTGGTaGAGCATATGTAAAACATTC | + |
|
Preference number: 4 (lower is better) Translates to: GKLRISSSLSYNLLGRALGVKIW*SICKTF Trigger: GAATGTTTTACATATGCTGCACCAGATTTTAACGCC...CAAGGCCCTGCCCAGGAGATTATATGACAGTGAAGAAGAAATCCTGAGTTTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR CCA 90 bp | CTAACCCAGCCTGATCTACAGAATGAGTTCAAGGACTACAGAGAAACCTGTCTTACGATACACAACAACTaGCTTTGTCTGACCAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTQPDLQNEFKDYRETCLTIHNN*LCLTNS Trigger: AGAATTGGTCAGACAAAGCCAGTTGTTGTGTATCGT...AAGACAGGTTTCTCTGTAGTCCTTGAACTCATTCTGTAGATCAGGCTGGGTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR TCA 90 bp | AAAGACAGCTCAGCAGTGCTCTTCCAAAGGACTTGTGTTTGTTTCTCAGCAACATCAATCATATATGGGTaGTTACAGCACTTTCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KDSSAVLFQRTCVCFSATSIIYG*LQHFRS Trigger: ACTTCGAAAGTGCTGTAATCACCCATATATGATTGA...TGTTGCTGAGAAACAAACACAAGTCCTTTGGAAGAGCACTGCTGAGCTGTCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR GCA 90 bp | GGTAAACTCAGGATTTCTTCTTCACTGTCATATAATCTCCTGGGCAGGGCCTTGTTTATTGCAAAGTGGTaGATAAACAACTACTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GKLRISSSLSYNLLGRALFIAKW*INNYFS Trigger: CGAGAAGTAGTTGTTTATGCACCACTTTGCAATAAA...CAAGGCCCTGCCCAGGAGATTATATGACAGTGAAGAAGAAATCCTGAGTTTACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR GCA 90 bp | AAAGACAGCTCAGCAGTGCTCTTCCAAAGGACTTGTGTTTGTTTCTCAGCAACATCAAGATGTCCAACATaGTTGTCATTTGTGAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: KDSSAVLFQRTCVCFSATSRCPT*LSFVKT Trigger: TGTTTTCACAAATGACAAGCATGTTGGACATCTTGA...TGTTGCTGAGAAACAAACACAAGTCCTTTGGAAGAGCACTGCTGAGCTGTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR CCA 90 bp | CTAACCCAGCCTGATCTACAGAATGAGTTCAAGGACTACAGAGAAACCTGTCTTGAAAAGAAAAACATCTaGATCCGTGTTGAAACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LTQPDLQNEFKDYRETCLEKKNI*IRVETV Trigger: TACAGTTTCAACACGGATCCAGATGTTTTTCTTTTC...AAGACAGGTTTCTCTGTAGTCCTTGAACTCATTCTGTAGATCAGGCTGGGTTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR TCA 90 bp | ATGGATTTCAAAGCCAACAGGCAAATTACCAGAATGGATGTAAACCAAAGTTTTCCAGGTACTCCCCTCTaGATCATCAATGCAATTGTA | + |
|
Preference number: 4 (lower is better) Translates to: MDFKANRQITRMDVNQSFPGTPL*IINAIV Trigger: TACAATTGCATTGATGATTCAGAGGGGAGTACCTGG...AAAACTTTGGTTTACATCCATTCTGGTAATTTGCCTGTTGGCTTTGAAATCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR CCA 90 bp | ATGGATTTCAAAGCCAACAGGCAAATTACCAGAATGGATGTAAACCAAAGTTTTTCCTGTGAAATGCTTTaGTTGTTGAAAGGGTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: MDFKANRQITRMDVNQSFSCEML*LLKGYR Trigger: CCTGTACCCTTTCAACAACCAAAGCATTTCACAGGA...AAAACTTTGGTTTACATCCATTCTGGTAATTTGCCTGTTGGCTTTGAAATCCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| 3UTR CAA 72 bp | AATAAGACTAACCATAGCCATGGTGTGTACATACCCTaGCAAATTCTGTGTCTATATACAAGTTTGCTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: NKTNHSHGVYIP*QILCLYTSLLK Trigger: TTTTAGCAAACTTGTATATAGACACAGAATTTGCAAGGGTATGTACACACCATGGCTATGGTTAGTCTTATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR CCA 90 bp | ATGGATTTCAAAGCCAACAGGCAAATTACCAGAATGGATGTAAACCAAAGTTTTAAAGGCGTTAAAATCTaGTGCAGCATATGTAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: MDFKANRQITRMDVNQSFKGVKI*CSICKT Trigger: TGTTTTACATATGCTGCACCAGATTTTAACGCCTTT...AAAACTTTGGTTTACATCCATTCTGGTAATTTGCCTGTTGGCTTTGAAATCCAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR CAA 90 bp | ATGTGTGGTGGAGCAAGCCTGCAATGCCTGCACTTGATGGGTGGAGGCAGGAGGGAAATGCTTTGGTTGTaGAAAGGGTACAGGCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: MCGGASLQCLHLMGGGRREMLWL*KGYRLS Trigger: GGACAGCCTGTACCCTTTCAACAACCAAAGCATTTC...CCTCCTGCCTCCACCCATCAAGTGCAGGCATTGCAGGCTTGCTCCACCACACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR CAA 90 bp | ATGTGTGGTGGAGCAAGCCTGCAATGCCTGCACTTGATGGGTGGAGGCAGGAGGTGTGAAATGCTTTGGTaGTTGAAAGGGTACAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: MCGGASLQCLHLMGGGRRCEMLW*LKGYRL Trigger: CAGCCTGTACCCTTTCAACAACCAAAGCATTTCACA...CCTCCTGCCTCCACCCATCAAGTGCAGGCATTGCAGGCTTGCTCCACCACACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR CAA 90 bp | GTGTGGTGGAGCAAGCCTGCAATGCCTGCACTTGATGGGTGGAGGCAGGAGGGTACACAACAACTGGCTTaGTCTGACCAATTCTATGAC | + |
|
Preference number: 5 (lower is better) Translates to: VWWSKPAMPALDGWRQEGTQQLA*SDQFYD Trigger: GTCATAGAATTGGTCAGACAAAGCCAGTTGTTGTGT...ACCCTCCTGCCTCCACCCATCAAGTGCAGGCATTGCAGGCTTGCTCCACCACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR CAA 90 bp | ATGTGTGGTGGAGCAAGCCTGCAATGCCTGCACTTGATGGGTGGAGGCAGGAGGCTTCTGTTCCTCCAATaGCTGTTGTTCCATTTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: MCGGASLQCLHLMGGGRRLLFLQ*LLFHFS Trigger: ACTAAAATGGAACAACAGCAATTGGAGGAACAGAAG...CCTCCTGCCTCCACCCATCAAGTGCAGGCATTGCAGGCTTGCTCCACCACACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR CAA 90 bp | ATGTGTGGTGGAGCAAGCCTGCAATGCCTGCACTTGATGGGTGGAGGCAGGAGGTTCCTCCAATTGCTGTaGTTCCATTTTAGTCAACAA | + |
|
Preference number: 5 (lower is better) Translates to: MCGGASLQCLHLMGGGRRFLQLL*FHFSQQ Trigger: TTGTTGACTAAAATGGAACAACAGCAATTGGAGGAA...CCTCCTGCCTCCACCCATCAAGTGCAGGCATTGCAGGCTTGCTCCACCACACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR CAA 90 bp | ATGTGTGGTGGAGCAAGCCTGCAATGCCTGCACTTGATGGGTGGAGGCAGGAGGGTTCGCTGTAATTTATaGACTTTCTACTTCGTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: MCGGASLQCLHLMGGGRRVRCNL*TFYFVV Trigger: AACGACGAAGTAGAAAGTCAATAAATTACAGCGAAC...CCTCCTGCCTCCACCCATCAAGTGCAGGCATTGCAGGCTTGCTCCACCACACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR CAA 90 bp | GGTAAACTCAGGATTTCTTCTTCACTGTCATATAATCTCCTGGGCAGGGCCTTGTTCCATGCCTTCTACTaGGTACCACCTCATTACTCC | + |
|
Preference number: 5 (lower is better) Translates to: GKLRISSSLSYNLLGRALFHAFY*VPPHYS Trigger: GGAGTAATGAGGTGGTACCAAGTAGAAGGCATGGAA...CAAGGCCCTGCCCAGGAGATTATATGACAGTGAAGAAGAAATCCTGAGTTTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS TCA 90 bp | ACTTGGTACCACCTCATTACTCCTCCTGTGAAATGCTTTGGTTGTTaGAAGGGTACAGGCTGTCCGTTACATTTCCGAACTGGGTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: TWYHLITPPVKCFGC*KGTGCPLHFRTGSK Trigger: TTTTGACCCAGTTCGGAAATGTAACGGACAGCCTGTACCCTTTCAACAACCAAAGCATTTCACAGGAGGAGTAATGAGGTGGTACCAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR CAA 90 bp | AGAAAGGAAAGGATGACTCTGTTCAAGATTAGCCTGGTGGTAGTGGTGCACGCACCAGTCAAAAGAAGTTaGTTATCAGCATTGAACCGT | + |
|
Preference number: 5 (lower is better) Translates to: RKERMTLFKISLVVVVHAPVKRS*LSALNR Trigger: ACGGTTCAATGCTGATAACAAACTTCTTTTGACTGG...TGCGTGCACCACTACCACCAGGCTAATCTTGAACAGAGTCATCCTTTCCTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR CAA 90 bp | AAAGACAGCTCAGCAGTGCTCTTCCAAAGGACTTGTGTTTGTTTCTCAGCAACATCTATGACATCTATCTaGAGCCTGGAGATCAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: KDSSAVLFQRTCVCFSATSMTSI*SLEIRL Trigger: CAGTCTGATCTCCAGGCTCAAGATAGATGTCATAGA...TGTTGCTGAGAAACAAACACAAGTCCTTTGGAAGAGCACTGCTGAGCTGTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR CAA 90 bp | GGTAAACTCAGGATTTCTTCTTCACTGTCATATAATCTCCTGGGCAGGGCCTTGAGTTTGTTATCAGCATaGAACCGTTTTAACTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GKLRISSSLSYNLLGRALSLLSA*NRFNSL Trigger: CAGGGAGTTAAAACGGTTCAATGCTGATAACAAACT...CAAGGCCCTGCCCAGGAGATTATATGACAGTGAAGAAGAAATCCTGAGTTTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR CAA 90 bp | AAAGACAGCTCAGCAGTGCTCTTCCAAAGGACTTGTGTTTGTTTCTCAGCAACAAGGATCCAAACATGTTaGCAATTGTGCGGTTCACAA | + |
|
Preference number: 5 (lower is better) Translates to: KDSSAVLFQRTCVCFSATRIQTC*QLCGSQ Trigger: TTGTGAACCGCACAATTGCAAACATGTTTGGATCCT...TGTTGCTGAGAAACAAACACAAGTCCTTTGGAAGAGCACTGCTGAGCTGTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR CAA 90 bp | AAAGACAGCTCAGCAGTGCTCTTCCAAAGGACTTGTGTTTGTTTCTCAGCAACAAGATGTCCAACATGCTaGTCATTTGTGAAAACACCA | + |
|
Preference number: 5 (lower is better) Translates to: KDSSAVLFQRTCVCFSATRCPTC*SFVKTP Trigger: TGGTGTTTTCACAAATGACAAGCATGTTGGACATCT...TGTTGCTGAGAAACAAACACAAGTCCTTTGGAAGAGCACTGCTGAGCTGTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR CAA 90 bp | CTAACCCAGCCTGATCTACAGAATGAGTTCAAGGACTACAGAGAAACCTGTCTTCAAAGTTCTGATAAATaGTTTTGCAAGGGAGTACCA | + |
|
Preference number: 5 (lower is better) Translates to: LTQPDLQNEFKDYRETCLQSSDK*FCKGVP Trigger: TGGTACTCCCTTGCAAAACAATTTATCAGAACTTTG...AAGACAGGTTTCTCTGTAGTCCTTGAACTCATTCTGTAGATCAGGCTGGGTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS-3UTR CAA 90 bp | CTAACCCAGCCTGATCTACAGAATGAGTTCAAGGACTACAGAGAAACCTGTCTTATCAATCTTAAATTCTaGTGTGACAGGGTCAATAGG | + |
|
Preference number: 5 (lower is better) Translates to: LTQPDLQNEFKDYRETCLINLKF*CDRVNR Trigger: CCTATTGACCCTGTCACACAAGAATTTAAGATTGAT...AAGACAGGTTTCTCTGTAGTCCTTGAACTCATTCTGTAGATCAGGCTGGGTTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS TCA 90 bp | TTGTGGATATTCTTTACTAATTTCCGACGGTCCTCCCGGGTTCCATaGTACAGCAGAGTAGGAATTTCTGGAGTAAATCTTTTAAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: LWIFFTNFRRSSRVP*YSRVGISGVNLLNS Trigger: TGAATTTAAAAGATTTACTCCAGAAATTCCTACTCTGCTGTATCATGGAACCCGGGAGGACCGTCGGAAATTAGTAAAGAATATCCACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS CCA 72 bp | CGCAGCCTCGAGCTGTTCCTCCTCCTCCAGCATGGCTaGAGTAATCACCGCAGGCTCCGTTTGTTCGGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: RSLELFLLLQHG*SNHRRLRLFGH Trigger: ATGGCCGAACAAACGGAGCCTGCGGTGATTACTCCAGCCATGCTGGAGGAGGAGGAACAGCTCGAGGCTGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025965.12 ENSMUST00000145051.2 |
||
| CDS CAA 72 bp | CCACCTCATTACTCCTCCTGTGAAATGCTTTGGTTGTaGAAAGGGTACAGGCTGTCCGTTACATTTCCGAAC | + |
|
Preference number: 6 (lower is better) Translates to: PPHYSSCEMLWL*KGYRLSVTFPN Trigger: GTTCGGAAATGTAACGGACAGCCTGTACCCTTTCAACAACCAAAGCATTTCACAGGAGGAGTAATGAGGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025965.12 ENSMUST00000145051.2 |
||
| CDS CAA 90 bp | TACTTGGTACCACCTCATTACTCCTCCTGTGAAATGCTTTGGTTGTaGAAAGGGTACAGGCTGTCCGTTACATTTCCGAACTGGGTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: YLVPPHYSSCEMLWL*KGYRLSVTFPNWVK Trigger: TTTGACCCAGTTCGGAAATGTAACGGACAGCCTGTACCCTTTCAACAACCAAAGCATTTCACAGGAGGAGTAATGAGGTGGTACCAAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS TCA 72 bp | CACCTCATTACTCCTCCTGTGAAATGCTTTGGTTGTTaGAAGGGTACAGGCTGTCCGTTACATTTCCGAACT | + |
|
Preference number: 6 (lower is better) Translates to: HLITPPVKCFGC*KGTGCPLHFRT Trigger: AGTTCGGAAATGTAACGGACAGCCTGTACCCTTTCAACAACCAAAGCATTTCACAGGAGGAGTAATGAGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025965.12 ENSMUST00000145051.2 |
||
| CDS CAA 72 bp | TTCCCAAAGCATCCTAAGCCATTCCATGCCTTCTACTaGGTACCACCTCATTACTCCTCCTGTGAAATGCTT | + |
|
Preference number: 6 (lower is better) Translates to: FPKHPKPFHAFY*VPPHYSSCEML Trigger: AAGCATTTCACAGGAGGAGTAATGAGGTGGTACCAAGTAGAAGGCATGGAATGGCTTAGGATGCTTTGGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS TCA 72 bp | TACCGAATTTCAGTGGACTCTCTGTCCCAAGACTTTTaGGCCTCTTCTAACATCTTCCGCTCTTTCTCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: YRISVDSLSQDF*ASSNIFRSFSS Trigger: ACTTGAGAAAGAGCGGAAGATGTTAGAAGAGGCTCAAAAGTCTTGGGACAGAGAGTCCACTGAAATTCGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025965.12 ENSMUST00000145051.2 |
||
| CDS CCA 72 bp | TTGGTACCACCTCATTACTCCTCCTGTGAAATGCTTTaGTTGTTGAAAGGGTACAGGCTGTCCGTTACATTT | + |
|
Preference number: 6 (lower is better) Translates to: LVPPHYSSCEML*LLKGYRLSVTF Trigger: AAATGTAACGGACAGCCTGTACCCTTTCAACAACCAAAGCATTTCACAGGAGGAGTAATGAGGTGGTACCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS CAA 90 bp | AATTCCATTTTCCCAAAGCATCCTAAGCCATTCCATGCCTTCTACTaGGTACCACCTCATTACTCCTCCTGTGAAATGCTTTGGTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: NSIFPKHPKPFHAFY*VPPHYSSCEMLWLL Trigger: CAACAACCAAAGCATTTCACAGGAGGAGTAATGAGGTGGTACCAAGTAGAAGGCATGGAATGGCTTAGGATGCTTTGGGAAAATGGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS TCA 72 bp | TTCTTTACTAATTTCCGACGGTCCTCCCGGGTTCCATaGTACAGCAGAGTAGGAATTTCTGGAGTAAATCTT | + |
|
Preference number: 6 (lower is better) Translates to: FFTNFRRSSRVP*YSRVGISGVNL Trigger: AAGATTTACTCCAGAAATTCCTACTCTGCTGTATCATGGAACCCGGGAGGACCGTCGGAAATTAGTAAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS GCA 72 bp | AAGAAAAGGTCCAGGTACTCCCCTCTGAATCATCAATaGAATTGTAGCAATGCACTGAACAGTCTTTCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: KKRSRYSPLNHQ*NCSNALNSLSQ Trigger: TTGGGAAAGACTGTTCAGTGCATTGCTACAATTGCATTGATGATTCAGAGGGGAGTACCTGGACCTTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS CAA 72 bp | AAGGGAGTACCAGTCAAAAGAAGTTTGTTATCAGCATaGAACCGTTTTAACTCCCTGATTAGCCGGCACTTC | + |
|
Preference number: 6 (lower is better) Translates to: KGVPVKRSLLSA*NRFNSLISRHF Trigger: GAAGTGCCGGCTAATCAGGGAGTTAAAACGGTTCAATGCTGATAACAAACTTCTTTTGACTGGTACTCCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS CAA 90 bp | CATGTTTGCAATTGTGCGGTTCACAATAGCTGTATAGAAGATCTCTaGTTTATTGCAAAGTGGTGCATAAACAACTACTTCTCGCTTAGG | + |
|
Preference number: 6 (lower is better) Translates to: HVCNCAVHNSCIEDL*FIAKWCINNYFSLR Trigger: CCTAAGCGAGAAGTAGTTGTTTATGCACCACTTTGCAATAAACAAGAGATCTTCTATACAGCTATTGTGAACCGCACAATTGCAAACATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS CAA 72 bp | AATTGTGCGGTTCACAATAGCTGTATAGAAGATCTCTaGTTTATTGCAAAGTGGTGCATAAACAACTACTTC | + |
|
Preference number: 6 (lower is better) Translates to: NCAVHNSCIEDL*FIAKWCINNYF Trigger: GAAGTAGTTGTTTATGCACCACTTTGCAATAAACAAGAGATCTTCTATACAGCTATTGTGAACCGCACAATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||
| CDS CAA 72 bp | CATTCAGCACTGGAATCTTCAGAATTTTCTAGTATTTaGAATATCCCTGTCTTCCCTTTAATTGGTCTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: HSALESSEFSSI*NIPVFPLIGLE Trigger: TTCAAGACCAATTAAAGGGAAGACAGGGATATTCAAAATACTAGAAAATTCTGAAGATTCCAGTGCTGAATG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025965.12 |
||