Pregenerated sensors for HELB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020228Ensembl transcript IDs: ENSMUST00000020449.12, ENSMUST00000154501.2
Found 204 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGACTCCTGCGCGATGATGTACACTCTGGAGCGGCCCCGGGTCACTaGCGTGTAAACATGTTGCCAGTGCTGGCGGCCTGCCTTCCCCAC | + |
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Preference number: 1 (lower is better) Translates to: RLLRDDVHSGAAPGH*RVNMLPVLAACLPH Trigger: GTGGGGAAGGCAGGCCGCCAGCACTGGCAACATGTTTACACGGCAGTGACCCGGGGCCGCTCCAGAGTGTACATCATCGCGCAGGAGTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
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| 3UTR TCA 90 bp | TTGCCCAGGCTGGCCATGAACGCAGATCCTCACATTTCCATCTCCTaGTTGCTGGGATCGTTGGCGTCGTCCGCCACACCTGCCGTACCT | + |
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Preference number: 1 (lower is better) Translates to: LPRLAMNADPHISIS*LLGSLASSATPAVP Trigger: AGGTACGGCAGGTGTGGCGGACGACGCCAACGATCCCAGCAATCAGGAGATGGAAATGTGAGGATCTGCGTTCATGGCCAGCCTGGGCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
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| 3UTR GCA 90 bp | CAGCTGCCAGAGAGCTTCTTCTGCAAGAAGTGTTTCAAACGCGTCTaGCTGGGGAAACCGCGCTTCCGGGTGGCACTCCTGAGTTCAGAC | + |
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Preference number: 1 (lower is better) Translates to: QLPESFFCKKCFKRV*LGKPRFRVALLSSD Trigger: GTCTGAACTCAGGAGTGCCACCCGGAAGCGCGGTTTCCCCAGGCAGACGCGTTTGAAACACTTCTTGCAGAAGAAGCTCTCTGGCAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
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| 3UTR GCA 90 bp | GAGGGCTCGAAGGCTGGGATGCGAAACCTGTTGAGGGTGCGCAGCTaGCAGAGAGCTTCTTCTGCAAGAAGTGTTTCAAACGCGTCTGCC | + |
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Preference number: 1 (lower is better) Translates to: EGSKAGMRNLLRVRS*QRASSARSVSNASA Trigger: GGCAGACGCGTTTGAAACACTTCTTGCAGAAGAAGCTCTCTGGCAGCTGCGCACCCTCAACAGGTTTCGCATCCCAGCCTTCGAGCCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
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| 3UTR CCA 90 bp | CAGAAGCTGACAGCCATCTTTCGTCGCCTCTGGCGCTGTCTGCAGTaGCTTTGTTGTCTGGGGTTCTACAGAGGTGTGACGCTGGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: QKLTAIFRRLWRCLQ*LCCLGFYRGVTLEA Trigger: AGCCTCCAGCGTCACACCTCTGTAGAACCCCAGACAACAAAGCCACTGCAGACAGCGCCAGAGGCGACGAAAGATGGCTGTCAGCTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
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| 3UTR TCA 90 bp | TCTTCCTCCGACTCGAGGGCTCGAAGGCTGGGATGCGAAACCTGTTaGGGGTGCGCAGCTGCCAGAGAGCTTCTTCTGCAAGAAGTGTTT | + |
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Preference number: 1 (lower is better) Translates to: SSSDSRARRLGCETC*GCAAARELLLQEVF Trigger: AAACACTTCTTGCAGAAGAAGCTCTCTGGCAGCTGCGCACCCTCAACAGGTTTCGCATCCCAGCCTTCGAGCCCTCGAGTCGGAGGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
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| 3UTR GCA 90 bp | GATGCGAAACCTGTTGAGGGTGCGCAGCTGCCAGAGAGCTTCTTCTaGAAGAAGTGTTTCAAACGCGTCTGCCTGGGGAAACCGCGCTTC | + |
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Preference number: 1 (lower is better) Translates to: DAKPVEGAQLPESFF*KKCFKRVCLGKPRF Trigger: GAAGCGCGGTTTCCCCAGGCAGACGCGTTTGAAACACTTCTTGCAGAAGAAGCTCTCTGGCAGCTGCGCACCCTCAACAGGTTTCGCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
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| 3UTR GCA 90 bp | AAAAGAAGGGAGAAAGATGGAAAAACTCTCTCTACCACTCTGCCATaGCAGGCAGTGGTGGCGCACGCCTTTAATCCCAGCACTCGGGAG | + |
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Preference number: 1 (lower is better) Translates to: KRREKDGKTLSTTLP*QAVVAHAFNPSTRE Trigger: CTCCCGAGTGCTGGGATTAAAGGCGTGCGCCACCACTGCCTGGCATGGCAGAGTGGTAGAGAGAGTTTTTCCATCTTTCTCCCTTCTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
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| 3UTR CCA 90 bp | CAGAGGACACCTGTGGAGATGGCGCTTCAACCATACGGAATTTACTaGGGCTTTCTTCATCAAACGGGAAGCCGTCACCGATTCTTTTGG | + |
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Preference number: 1 (lower is better) Translates to: QRTPVEMALQPYGIY*GFLHQTGSRHRFFW Trigger: CCAAAAGAATCGGTGACGGCTTCCCGTTTGATGAAGAAAGCCCCAGTAAATTCCGTATGGTTGAAGCGCCATCTCCACAGGTGTCCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
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| 3UTR TCA 90 bp | GGTTTAAAAAGCTGTCTGGGAGTGAGAGTATTCAACCTCATATTCTaGAACACAGAGGACACCTGTGGAGATGGCGCTTCAACCATACGG | + |
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Preference number: 1 (lower is better) Translates to: GLKSCLGVRVFNLIF*NTEDTCGDGASTIR Trigger: CCGTATGGTTGAAGCGCCATCTCCACAGGTGTCCTCTGTGTTTCAGAATATGAGGTTGAATACTCTCACTCCCAGACAGCTTTTTAAACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
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| 3UTR CCA 90 bp | AGTGAGAGTATTCAACCTCATATTCTGAAACACAGAGGACACCTGTaGAGATGGCGCTTCAACCATACGGAATTTACTGGGGCTTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: SESIQPHILKHRGHL*RWRFNHTEFTGAFF Trigger: GAAGAAAGCCCCAGTAAATTCCGTATGGTTGAAGCGCCATCTCCACAGGTGTCCTCTGTGTTTCAGAATATGAGGTTGAATACTCTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
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| 3UTR CCA 90 bp | AGTATTCAACCTCATATTCTGAAACACAGAGGACACCTGTGGAGATaGCGCTTCAACCATACGGAATTTACTGGGGCTTTCTTCATCAAA | + |
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Preference number: 1 (lower is better) Translates to: SIQPHILKHRGHLWR*RFNHTEFTGAFFIK Trigger: TTTGATGAAGAAAGCCCCAGTAAATTCCGTATGGTTGAAGCGCCATCTCCACAGGTGTCCTCTGTGTTTCAGAATATGAGGTTGAATACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
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| 3UTR TCA 90 bp | ACAAATGCCCAAAACCATAATGCTGTCTTCTCAGAGTTTGAAGTTTaGAACTTTGAAGCTAAAATGTTCATCTTGTCTTGGGAGGAAAAA | + |
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Preference number: 1 (lower is better) Translates to: TNAQNHNAVFSEFEV*NFEAKMFILSWEEK Trigger: TTTTTCCTCCCAAGACAAGATGAACATTTTAGCTTCAAAGTTTCAAACTTCAAACTCTGAGAAGACAGCATTATGGTTTTGGGCATTTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
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| 3UTR CAA 90 bp | GATGTACACTCTGGAGCGGCCCCGGGTCACTGCCGTGTAAACATGTaGCCAGTGCTGGCGGCCTGCCTTCCCCACGACGTAGACGACTGT | + |
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Preference number: 2 (lower is better) Translates to: DVHSGAAPGHCRVNM*PVLAACLPHDVDDC Trigger: ACAGTCGTCTACGTCGTGGGGAAGGCAGGCCGCCAGCACTGGCAACATGTTTACACGGCAGTGACCCGGGGCCGCTCCAGAGTGTACATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
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| 3UTR-3UTR GCA 90 bp | GCTGGCGGCCTGCCTTCCCCACGACGTAGACGACTGTGTTCTCCTCGGACCCCTCGTTGCACAGGCGGGTaGTGCTTTCGAAATCCTGTT | + |
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Preference number: 2 (lower is better) Translates to: AGGLPSPRRRRLCSPRTPRCTGG*CFRNPV Trigger: AACAGGATTTCGAAAGCAGCACCCGCCTGTGCAACG...AGGGGTCCGAGGAGAACACAGTCGTCTACGTCGTGGGGAAGGCAGGCCGCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
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| 3UTR CAA 90 bp | GACAGCCATCTTTCGTCGCCTCTGGCGCTGTCTGCAGTGGCTTTGTaGTCTGGGGTTCTACAGAGGTGTGACGCTGGAGGCTGGGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: DSHLSSPLALSAVAL*SGVLQRCDAGGWVS Trigger: TGACACCCAGCCTCCAGCGTCACACCTCTGTAGAACCCCAGACAACAAAGCCACTGCAGACAGCGCCAGAGGCGACGAAAGATGGCTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTGGAGCGGCCCCGGGTCACTGCCGTGTAAACATGTTGCCAGTGCTGGCGGCTTGCCCAGGCATGCTTaGTCTGACAGTTTGCCATTA | + |
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Preference number: 2 (lower is better) Translates to: LWSGPGSLPCKHVASAGGLPRHA*SDSLPL Trigger: TAATGGCAAACTGTCAGATCAAGCATGCCTGGGCAA...GCCGCCAGCACTGGCAACATGTTTACACGGCAGTGACCCGGGGCCGCTCCAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCTGCCAGAGAGCTTCTTCTGCAAGAAGTGTTTCAAACGCGTCTGCCTGGGGACATGTTGCCAGTGCTaGCGGCCTGCCTTCCCCACG | + |
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Preference number: 2 (lower is better) Translates to: QLPESFFCKKCFKRVCLGTCCQC*RPAFPT Trigger: CGTGGGGAAGGCAGGCCGCCAGCACTGGCAACATGT...CCCCAGGCAGACGCGTTTGAAACACTTCTTGCAGAAGAAGCTCTCTGGCAGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
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| 3UTR CAA 90 bp | GTCTTCCTCCGACTCGAGGGCTCGAAGGCTGGGATGCGAAACCTGTaGAGGGTGCGCAGCTGCCAGAGAGCTTCTTCTGCAAGAAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: VFLRLEGSKAGMRNL*RVRSCQRASSARSV Trigger: AACACTTCTTGCAGAAGAAGCTCTCTGGCAGCTGCGCACCCTCAACAGGTTTCGCATCCCAGCCTTCGAGCCCTCGAGTCGGAGGAAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCTGGGGTTCTACAGAGGTGTGACGCTGGAGGCTGGGTGTCAGGTCTTCCTCAGTATGAATGGTCCTTaGCCAGGCATGCTTGATCTG | + |
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Preference number: 2 (lower is better) Translates to: CLGFYRGVTLEAGCQVFLSMNGP*PGMLDL Trigger: CAGATCAAGCATGCCTGGGCAAGGACCATTCATACT...GAGGAAGACCTGACACCCAGCCTCCAGCGTCACACCTCTGTAGAACCCCAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCTGCCAGAGAGCTTCTTCTGCAAGAAGTGTTTCAAACGCGTCTGCCTGGGGTTGTCCACAATCAGCTaGGACTCTGTCCTGTGGTTC | + |
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Preference number: 2 (lower is better) Translates to: QLPESFFCKKCFKRVCLGLSTIS*DSVLWF Trigger: GAACCACAGGACAGAGTCTCAGCTGATTGTGGACAA...CCCCAGGCAGACGCGTTTGAAACACTTCTTGCAGAAGAAGCTCTCTGGCAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCTGGGGTTCTACAGAGGTGTGACGCTGGAGGCTGGGTGTCAGGTCTTCCTCCCAGAGAGCTTCTTCTaGAAGAAGTGTTTCAAACGC | + |
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Preference number: 2 (lower is better) Translates to: CLGFYRGVTLEAGCQVFLPESFF*KKCFKR Trigger: GCGTTTGAAACACTTCTTGCAGAAGAAGCTCTCTGG...GAGGAAGACCTGACACCCAGCCTCCAGCGTCACACCTCTGTAGAACCCCAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
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| 3UTR-3UTR TCA 90 bp | TCACTGCCGTGTAAACATGTTGCCAGTGCTGGCGGCCTGCCTTCCCCACGACGTCAGAAGTCCTTTCCTTaGAGCAAAGTTTTAACTGCA | + |
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Preference number: 2 (lower is better) Translates to: SLPCKHVASAGGLPSPRRQKSFP*SKVLTA Trigger: TGCAGTTAAAACTTTGCTTCAAGGAAAGGACTTCTG...ACGTCGTGGGGAAGGCAGGCCGCCAGCACTGGCAACATGTTTACACGGCAGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
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| 3UTR-3UTR TCA 90 bp | CTTAGAAGGAATGAGACCTTGGCTTCAGTTCCAGCACCAAAAGAAGGGAGAAAGGGCACAGGAATGGAGTaGTGGCCACAGCATCACAGC | + |
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Preference number: 2 (lower is better) Translates to: LRRNETLASVPAPKEGRKGTGME*WPQHHS Trigger: GCTGTGATGCTGTGGCCATCACTCCATTCCTGTGCC...CTTTCTCCCTTCTTTTGGTGCTGGAACTGAAGCCAAGGTCTCATTCCTTCTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
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| 3UTR-3UTR TCA 90 bp | AGGGCACCCGAAATAACAAAAGCATTACCATCAGCTGCATCACATGACTGGTCTGCCTGGTCTACAAAGTaGGTTCCAGGTCAGCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: RAPEITKALPSAASHDWSAWSTK*VPGQPQ Trigger: CTGGGGCTGACCTGGAACTCACTTTGTAGACCAGGC...AGACCAGTCATGTGATGCAGCTGATGGTAATGCTTTTGTTATTTCGGGTGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
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| 3UTR-3UTR GCA 90 bp | GCAGATCAGTCCCAGGGCACCCGAAATAACAAAAGCATTACCATCAGCTGCATCTTTGCTGGTTCAGTGTaGTGGCAAAGGAGATCCGCA | + |
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Preference number: 2 (lower is better) Translates to: ADQSQGTRNNKSITISCIFAGSV*WQRRSA Trigger: TGCGGATCTCCTTTGCCAGCACACTGAACCAGCAAA...GATGCAGCTGATGGTAATGCTTTTGTTATTTCGGGTGCCCTGGGACTGATCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
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| 3UTR-3UTR CCA 90 bp | TCTTTCGTCGCCTCTGGCGCTGTCTGCAGTGGCTTTGTTGTCTGGGGTTCTACAATGAGTTTCTTCTCATaGTCTTTGATGAGGTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: SFVASGAVCSGFVVWGSTMSFFS*SLMRWP Trigger: AGGCCACCTCATCAAAGACCATGAGAAGAAACTCAT...TGTAGAACCCCAGACAACAAAGCCACTGCAGACAGCGCCAGAGGCGACGAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
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| 3UTR-3UTR TCA 90 bp | ACACAGAGGACACCTGTGGAGATGGCGCTTCAACCATACGGAATTTACTGGGGCTTACATCCCGTGTTATaGAAAATATTTCCCCGTTGC | + |
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Preference number: 2 (lower is better) Translates to: TQRTPVEMALQPYGIYWGLHPVL*KIFPRC Trigger: GCAACGGGGAAATATTTTTCATAACACGGGATGTAA...GCCCCAGTAAATTCCGTATGGTTGAAGCGCCATCTCCACAGGTGTCCTCTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGAGGCTGAAATCATCATGGTTTTCTTGGATTGGGTGATTTTAGAATACCTCTGGTGGTGGTGGTGGTaGTATGGGCTGAGCAGGGTC | + |
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Preference number: 2 (lower is better) Translates to: TEAEIIMVFLDWVILEYLWWWWW*YGLSRV Trigger: GACCCTGCTCAGCCCATACCACCACCACCACCACCA...GAGGTATTCTAAAATCACCCAATCCAAGAAAACCATGATGATTTCAGCCTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
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| 3UTR-3UTR CCA 90 bp | CAGCTGCATCACATGACTGGTCTTGTTTGTTTACTTCCTGGTACATATAAAAGTGTGGTGGTGGTGGTATaGGCTGAGCAGGGTCTTACG | + |
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Preference number: 2 (lower is better) Translates to: QLHHMTGLVCLLPGTYKSVVVVV*AEQGLT Trigger: CGTAAGACCCTGCTCAGCCCATACCACCACCACCAC...ACTTTTATATGTACCAGGAAGTAAACAAACAAGACCAGTCATGTGATGCAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
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| 3UTR-3UTR CCA 90 bp | CCCGAAATAACAAAAGCATTACCATCAGCTGCATCACATGACTGGTCTTGTTTGGCTGGTTCAGTGTGCTaGCAAAGGAGATCCGCAATG | + |
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Preference number: 2 (lower is better) Translates to: PEITKALPSAASHDWSCLAGSVC*QRRSAM Trigger: CATTGCGGATCTCCTTTGCCAGCACACTGAACCAGC...CAAACAAGACCAGTCATGTGATGCAGCTGATGGTAATGCTTTTGTTATTTCGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
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| 3UTR-3UTR CCA 90 bp | AGGGCACCCGAAATAACAAAAGCATTACCATCAGCTGCATCACATGACTGGTCTGAAGGAATGAGACCTTaGCTTCAGTTCCAGCACCAA | + |
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Preference number: 2 (lower is better) Translates to: RAPEITKALPSAASHDWSEGMRP*LQFQHQ Trigger: TTGGTGCTGGAACTGAAGCCAAGGTCTCATTCCTTC...AGACCAGTCATGTGATGCAGCTGATGGTAATGCTTTTGTTATTTCGGGTGCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
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| 3UTR-3UTR CCA 90 bp | TCGGGGAGTAAATCTGAGAGGTATGCATTCCGGGTACAGCAGATCTTATCACCGTTCAGCATCAAATTTTaGAAACTGACGTCTGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: SGSKSERYAFRVQQILSPFSIKF*KLTSGD Trigger: ATCTCCAGACGTCAGTTTCCAAAATTTGATGCTGAA...CGGTGATAAGATCTGCTGTACCCGGAATGCATACCTCTCAGATTTACTCCCCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGATCAGTCCCAGGGCACCCGAAATAACAAAAGCATTACCATCAGCTGCATCATGGTTTTCTTGGATTaGGTGATTTTAGAATACCTC | + |
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Preference number: 2 (lower is better) Translates to: ADQSQGTRNNKSITISCIMVFLD*VILEYL Trigger: GAGGTATTCTAAAATCACCCAATCCAAGAAAACCAT...GATGCAGCTGATGGTAATGCTTTTGTTATTTCGGGTGCCCTGGGACTGATCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
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| 3UTR-3UTR GCA 90 bp | CAGCTGCATCACATGACTGGTCTTGTTTGTTTACTTCCTGGTACATATAAAAGTTTATTTTGGGTCATGTaGCCAAAATTACAAATGCCC | + |
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Preference number: 2 (lower is better) Translates to: QLHHMTGLVCLLPGTYKSLFWVM*PKLQMP Trigger: GGGCATTTGTAATTTTGGGCACATGACCCAAAATAA...ACTTTTATATGTACCAGGAAGTAAACAAACAAGACCAGTCATGTGATGCAGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
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| 3UTR CAA 90 bp | ACTTCCAAACCGGCCTCGTTATTAATGGTCAGAAGTCTTTTTCTTTaGAAAGTTACGTCAGTTACATCCCGTGTTATGAAAAATATTTCC | + |
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Preference number: 2 (lower is better) Translates to: TSKPASLLMVRSLFL*KVTSVTSRVMKNIS Trigger: GGAAATATTTTTCATAACACGGGATGTAACTGACGTAACTTTCAAAAGAAAAAGACTTCTGACCATTAATAACGAGGCCGGTTTGGAAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
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| 3UTR GCA 72 bp | CGCGATGATGTACACTCTGGAGCGGCCCCGGGTCACTaGCGTGTAAACATGTTGCCAGTGCTGGCGGCCTGC | + |
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Preference number: 3 (lower is better) Translates to: RDDVHSGAAPGH*RVNMLPVLAAC Trigger: GCAGGCCGCCAGCACTGGCAACATGTTTACACGGCAGTGACCCGGGGCCGCTCCAGAGTGTACATCATCGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
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| 3UTR TCA 72 bp | CCCCACGTACGCAGAGCCCCAGGCACAGGAATGGAGTaGTGGCCACAGCATCACAGCAAGGATGTCGCCACA | + |
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Preference number: 3 (lower is better) Translates to: PHVRRAPGTGME*WPQHHSKDVAT Trigger: TGTGGCGACATCCTTGCTGTGATGCTGTGGCCATCACTCCATTCCTGTGCCTGGGGCTCTGCGTACGTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
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| 3UTR CCA 72 bp | CCAAGCCCCACGTACGCAGAGCCCCAGGCACAGGAATaGAGTGATGGCCACAGCATCACAGCAAGGATGTCG | + |
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Preference number: 3 (lower is better) Translates to: PSPTYAEPQAQE*SDGHSITARMS Trigger: CGACATCCTTGCTGTGATGCTGTGGCCATCACTCCATTCCTGTGCCTGGGGCTCTGCGTACGTGGGGCTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
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| 3UTR-3UTR CAA 90 bp | GCTGGCGGCCTGCCTTCCCCACGACGTAGACGACTGTGTTCTCCTCGGACCCCTAAAAATATTTCCCCGTaGCACAGGCGGGTGCTGCTT | + |
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Preference number: 3 (lower is better) Translates to: AGGLPSPRRRRLCSPRTPKNISP*HRRVLL Trigger: AAGCAGCACCCGCCTGTGCAACGGGGAAATATTTTT...AGGGGTCCGAGGAGAACACAGTCGTCTACGTCGTGGGGAAGGCAGGCCGCCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
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| 3UTR TCA 72 bp | GACTCGAGGGCTCGAAGGCTGGGATGCGAAACCTGTTaGGGGTGCGCAGCTGCCAGAGAGCTTCTTCTGCAA | + |
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Preference number: 3 (lower is better) Translates to: DSRARRLGCETC*GCAAARELLLQ Trigger: TTGCAGAAGAAGCTCTCTGGCAGCTGCGCACCCTCAACAGGTTTCGCATCCCAGCCTTCGAGCCCTCGAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
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| 3UTR GCA 72 bp | CACTGCCGTGTAAACATGTTGCCAGTGCTGGCGGCCTaGCTTCCCCACGACGTAGACGACTGTGTTCTCCTC | + |
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Preference number: 3 (lower is better) Translates to: HCRVNMLPVLAA*LPHDVDDCVLL Trigger: GAGGAGAACACAGTCGTCTACGTCGTGGGGAAGGCAGGCCGCCAGCACTGGCAACATGTTTACACGGCAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
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| 3UTR-3UTR CAA 90 bp | GGCGGCCTGCCTTCCCCACGACGTAGACGACTGTGTTCTCCTCGGACCCCTGAATTGCAGCAGCAGTCATaGATGAGGTCACAGTCTTGC | + |
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Preference number: 3 (lower is better) Translates to: GGLPSPRRRRLCSPRTPELQQQS*MRSQSC Trigger: GCAAGACTGTGACCTCATCAATGACTGCTGCTGCAA...TTCAGGGGTCCGAGGAGAACACAGTCGTCTACGTCGTGGGGAAGGCAGGCCGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
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| 3UTR GCA 72 bp | GAGAGCTTCTTCTGCAAGAAGTGTTTCAAACGCGTCTaGCTGGGGAAACCGCGCTTCCGGGTGGCACTCCTG | + |
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Preference number: 3 (lower is better) Translates to: ESFFCKKCFKRV*LGKPRFRVALL Trigger: CAGGAGTGCCACCCGGAAGCGCGGTTTCCCCAGGCAGACGCGTTTGAAACACTTCTTGCAGAAGAAGCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
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| 3UTR TCA 72 bp | CTGGCCATGAACGCAGATCCTCACATTTCCATCTCCTaGTTGCTGGGATCGTTGGCGTCGTCCGCCACACCT | + |
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Preference number: 3 (lower is better) Translates to: LAMNADPHISIS*LLGSLASSATP Trigger: AGGTGTGGCGGACGACGCCAACGATCCCAGCAATCAGGAGATGGAAATGTGAGGATCTGCGTTCATGGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
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| 3UTR CCA 72 bp | ACAGCCATCTTTCGTCGCCTCTGGCGCTGTCTGCAGTaGCTTTGTTGTCTGGGGTTCTACAGAGGTGTGACG | + |
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Preference number: 3 (lower is better) Translates to: TAIFRRLWRCLQ*LCCLGFYRGVT Trigger: CGTCACACCTCTGTAGAACCCCAGACAACAAAGCCACTGCAGACAGCGCCAGAGGCGACGAAAGATGGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
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| 3UTR-3UTR CAA 90 bp | CTCTGGAGCGGCCCCGGGTCACTGCCGTGTAAACATGTTGCCAGTGCTGGCGGCGATGAGGTCACAGTCTaGCCTTCTAAATGCAATAAA | + |
|
Preference number: 3 (lower is better) Translates to: LWSGPGSLPCKHVASAGGDEVTV*PSKCNK Trigger: TTTATTGCATTTAGAAGGCAAGACTGTGACCTCATC...GCCGCCAGCACTGGCAACATGTTTACACGGCAGTGACCCGGGGCCGCTCCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
||
| 3UTR GCA 72 bp | CCTGTTGAGGGTGCGCAGCTGCCAGAGAGCTTCTTCTaGAAGAAGTGTTTCAAACGCGTCTGCCTGGGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: PVEGAQLPESFF*KKCFKRVCLGK Trigger: TTTCCCCAGGCAGACGCGTTTGAAACACTTCTTGCAGAAGAAGCTCTCTGGCAGCTGCGCACCCTCAACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
||
| 3UTR GCA 72 bp | GAGAAAGATGGAAAAACTCTCTCTACCACTCTGCCATaGCAGGCAGTGGTGGCGCACGCCTTTAATCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: EKDGKTLSTTLP*QAVVAHAFNPS Trigger: GCTGGGATTAAAGGCGTGCGCCACCACTGCCTGGCATGGCAGAGTGGTAGAGAGAGTTTTTCCATCTTTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| 3UTR GCA 72 bp | GAAGGGAGAAAGATGGAAAAACTCTCTCTACCACTCTaGCATGCCAGGCAGTGGTGGCGCACGCCTTTAATC | + |
|
Preference number: 3 (lower is better) Translates to: EGRKMEKLSLPL*HARQWWRTPLI Trigger: GATTAAAGGCGTGCGCCACCACTGCCTGGCATGGCAGAGTGGTAGAGAGAGTTTTTCCATCTTTCTCCCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| 3UTR CCA 72 bp | CCTGTGGAGATGGCGCTTCAACCATACGGAATTTACTaGGGCTTTCTTCATCAAACGGGAAGCCGTCACCGA | + |
|
Preference number: 3 (lower is better) Translates to: PVEMALQPYGIY*GFLHQTGSRHR Trigger: TCGGTGACGGCTTCCCGTTTGATGAAGAAAGCCCCAGTAAATTCCGTATGGTTGAAGCGCCATCTCCACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAAACATGTTGCCAGTGCTGGCGGCCTGCCTTCCCCACGACGTAGACGACTGTCTTTCGAAATCCTGTTaGATTTTAGCATCGTCGTCA | + |
|
Preference number: 3 (lower is better) Translates to: VNMLPVLAACLPHDVDDCLSKSC*ILASSS Trigger: TGACGACGATGCTAAAATCAAACAGGATTTCGAAAG...ACAGTCGTCTACGTCGTGGGGAAGGCAGGCCGCCAGCACTGGCAACATGTTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
||
| 3UTR CCA 72 bp | TGGCTTCAGTTCCAGCACCAAAAGAAGGGAGAAAGATaGAAAAACTCTCTCTACCACTCTGCCATGCCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: WLQFQHQKKGER*KNSLYHSAMPG Trigger: GCCTGGCATGGCAGAGTGGTAGAGAGAGTTTTTCCATCTTTCTCCCTTCTTTTGGTGCTGGAACTGAAGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| 3UTR TCA 72 bp | TTGCTGGTTCAGTGTGCTGGCAAAGGAGATCCGCAATaGTCACATGGCATTATCACAAAACATCCAGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LLVQCAGKGDPQ*SHGIITKHPAA Trigger: GGCTGCTGGATGTTTTGTGATAATGCCATGTGATCATTGCGGATCTCCTTTGCCAGCACACTGAACCAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| 3UTR GCA 72 bp | AACAGGTACAATCAGTCCACCTTTGCTGGTTCAGTGTaGTGGCAAAGGAGATCCGCAATGATCACATGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: NRYNQSTFAGSV*WQRRSAMITWH Trigger: ATGCCATGTGATCATTGCGGATCTCCTTTGCCAGCACACTGAACCAGCAAAGGTGGACTGATTGTACCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| 3UTR CCA 72 bp | CCTCATATTCTGAAACACAGAGGACACCTGTGGAGATaGCGCTTCAACCATACGGAATTTACTGGGGCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: PHILKHRGHLWR*RFNHTEFTGAF Trigger: GAAAGCCCCAGTAAATTCCGTATGGTTGAAGCGCCATCTCCACAGGTGTCCTCTGTGTTTCAGAATATGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTGTTGAGGGTGCGCAGCTGCCAGAGAGCTTCTTCTGCAAGAAGTGTTTCAAAGTTCAGCATCAAATTTaGGAAACTGACGTCTGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: PVEGAQLPESFFCKKCFKVQHQI*ETDVWR Trigger: TCTCCAGACGTCAGTTTCCAAAATTTGATGCTGAAC...TTTGAAACACTTCTTGCAGAAGAAGCTCTCTGGCAGCTGCGCACCCTCAACAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
||
| 3UTR TCA 72 bp | GTGTCCCCTGTCAACTGTTCTCACGAGGACAGAGGCTaGAATCATCATGGTTTTCTTGGATTGGGTGATTTT | + |
|
Preference number: 3 (lower is better) Translates to: VSPVNCSHEDRG*NHHGFLGLGDF Trigger: AAAATCACCCAATCCAAGAAAACCATGATGATTTCAGCCTCTGTCCTCGTGAGAACAGTTGACAGGGGACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| 3UTR GCA 72 bp | ATGTGTTACAATCAACAGGTACAATCAGTCCACCTTTaGTGGTTCAGTGTGCTGGCAAAGGAGATCCGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: MCYNQQVQSVHL*WFSVLAKEIRN Trigger: ATTGCGGATCTCCTTTGCCAGCACACTGAACCAGCAAAGGTGGACTGATTGTACCTGTTGATTGTAACACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| 3UTR CCA 72 bp | ATTCAACCTCATATTCTGAAACACAGAGGACACCTGTaGAGATGGCGCTTCAACCATACGGAATTTACTGGG | + |
|
Preference number: 3 (lower is better) Translates to: IQPHILKHRGHL*RWRFNHTEFTG Trigger: CCCAGTAAATTCCGTATGGTTGAAGCGCCATCTCCACAGGTGTCCTCTGTGTTTCAGAATATGAGGTTGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGGCACCCGAAATAACAAAAGCATTACCATCAGCTGCATCACATGACTGGTCTCTGTCTTCTCAGAGTTaGAAGTTTGAAACTTTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: RAPEITKALPSAASHDWSLSSQS*KFETLK Trigger: CTTCAAAGTTTCAAACTTCAAACTCTGAGAAGACAG...AGACCAGTCATGTGATGCAGCTGATGGTAATGCTTTTGTTATTTCGGGTGCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| 3UTR TCA 72 bp | GTATATAAATTAGATCGGTGTTCACCTTTAGACGACTaGGATCTGCTGTCTTCTTCAGGGAGTCTCACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: VYKLDRCSPLDD*DLLSSSGSLTK Trigger: CTTTGTGAGACTCCCTGAAGAAGACAGCAGATCTCAGTCGTCTAAAGGTGAACACCGATCTAATTTATATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
||
| 3UTR TCA 72 bp | CCACAGATATTTAGTTCAGCATCAAATTTTGGAAACTaGCGTCTGGAGATTCTTGTAGCATTGTCCACAATC | + |
|
Preference number: 3 (lower is better) Translates to: PQIFSSASNFGN*RLEILVALSTI Trigger: GATTGTGGACAATGCTACAAGAATCTCCAGACGTCAGTTTCCAAAATTTGATGCTGAACTAAATATCTGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGCTGCATCACATGACTGGTCTTGTTTGTTTACTTCCTGGTACATATAAAAGTCATGGTTTTCTTGGATaGGGTGATTTTAGAATACCT | + |
|
Preference number: 3 (lower is better) Translates to: QLHHMTGLVCLLPGTYKSHGFLG*GDFRIP Trigger: AGGTATTCTAAAATCACCCAATCCAAGAAAACCATG...ACTTTTATATGTACCAGGAAGTAAACAAACAAGACCAGTCATGTGATGCAGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| 3UTR CAA 72 bp | TCTGGAGCGGCCCCGGGTCACTGCCGTGTAAACATGTaGCCAGTGCTGGCGGCCTGCCTTCCCCACGACGTA | + |
|
Preference number: 4 (lower is better) Translates to: SGAAPGHCRVNM*PVLAACLPHDV Trigger: TACGTCGTGGGGAAGGCAGGCCGCCAGCACTGGCAACATGTTTACACGGCAGTGACCCGGGGCCGCTCCAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
||
| 3UTR CAA 72 bp | CGACTCGAGGGCTCGAAGGCTGGGATGCGAAACCTGTaGAGGGTGCGCAGCTGCCAGAGAGCTTCTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RLEGSKAGMRNL*RVRSCQRASSA Trigger: TGCAGAAGAAGCTCTCTGGCAGCTGCGCACCCTCAACAGGTTTCGCATCCCAGCCTTCGAGCCCTCGAGTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
||
| 3UTR CAA 72 bp | CTTTCGTCGCCTCTGGCGCTGTCTGCAGTGGCTTTGTaGTCTGGGGTTCTACAGAGGTGTGACGCTGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSSPLALSAVAL*SGVLQRCDAGG Trigger: GCCTCCAGCGTCACACCTCTGTAGAACCCCAGACAACAAAGCCACTGCAGACAGCGCCAGAGGCGACGAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
||
| CDS-3UTR GCA 90 bp | GTGGTGGTGGTGGTGGTGGTATGGGCTGAGCAGGGTCTTACGATGTTGCCCAGGCTCATCTCCTCACCCTaGTGCTCCCTTGGTGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: VVVVVVVWAEQGLTMLPRLISSP*CSLGVD Trigger: GTCTACACCAAGGGAGCAGCAGGGTGAGGAGATGAG...CCTGGGCAACATCGTAAGACCCTGCTCAGCCCATACCACCACCACCACCACCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR GCA 90 bp | TCTTTCGTCGCCTCTGGCGCTGTCTGCAGTGGCTTTGTTGTCTGGGGTTCTACACCACCTCCTCCGGCTTaGTCCCTTCCACTGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SFVASGAVCSGFVVWGSTPPPPA*SLPLPQ Trigger: CTGAGGCAGTGGAAGGGAGCAAGCCGGAGGAGGTGG...TGTAGAACCCCAGACAACAAAGCCACTGCAGACAGCGCCAGAGGCGACGAAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
||
| CDS-3UTR GCA 90 bp | GTGGTGGTGGTGGTGGTGGTATGGGCTGAGCAGGGTCTTACGATGTTGCCCAGGACCAATGCATTCTTCTaGAGGGGCGTCATCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VVVVVVVWAEQGLTMLPRTNAFF*RGVISW Trigger: CCAGCTGATGACGCCCCTGCAGAAGAATGCATTGGT...CCTGGGCAACATCGTAAGACCCTGCTCAGCCCATACCACCACCACCACCACCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR TCA 90 bp | CTCTGGAGCGGCCCCGGGTCACTGCCGTGTAAACATGTTGCCAGTGCTGGCGGCAGTCCTTCTCATAAATaGCCACGTCAATGTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LWSGPGSLPCKHVASAGGSPSHK*PRQCPS Trigger: TGAAGGACATTGACGTGGTCATTTATGAGAAGGACT...GCCGCCAGCACTGGCAACATGTTTACACGGCAGTGACCCGGGGCCGCTCCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
||
| CDS-3UTR TCA 90 bp | GTGGTGGTGGTGGTGGTGGTATGGGCTGAGCAGGGTCTTACGATGTTGCCCAGGTTGTCCACAATCAGCTaGGACTCTGTCCTGTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VVVVVVVWAEQGLTMLPRLSTIS*DSVLWF Trigger: GAACCACAGGACAGAGTCTCAGCTGATTGTGGACAA...CCTGGGCAACATCGTAAGACCCTGCTCAGCCCATACCACCACCACCACCACCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR TCA 90 bp | GTGGTGGTGGTGGTGGTGGTATGGGCTGAGCAGGGTCTTACGATGTTGCCCAGGCACCGACGGCAAAGATaGGTTTCTTCTCATGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VVVVVVVWAEQGLTMLPRHRRQR*VSSHGL Trigger: AAGACCATGAGAAGAAACTCATCTTTGCCGTCGGTG...CCTGGGCAACATCGTAAGACCCTGCTCAGCCCATACCACCACCACCACCACCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR GCA 90 bp | AAACACAGAGGACACCTGTGGAGATGGCGCTTCAACCATACGGAATTTACTGGGTCCCCCTCCTCCTCCTaGGCACAATCCTCCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KHRGHLWRWRFNHTEFTGSPSSS*AQSSSS Trigger: CGAGGAGGAGGATTGTGCGCAGGAGGAGGAGGGGGA...CCCAGTAAATTCCGTATGGTTGAAGCGCCATCTCCACAGGTGTCCTCTGTGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
||
| CDS-3UTR GCA 90 bp | GCAGATCAGTCCCAGGGCACCCGAAATAACAAAAGCATTACCATCAGCTGCATCCCACCTCCTCCGGCTTaGTCCCTTCCACTGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ADQSQGTRNNKSITISCIPPPPA*SLPLPQ Trigger: CTGAGGCAGTGGAAGGGAGCAAGCCGGAGGAGGTGG...GATGCAGCTGATGGTAATGCTTTTGTTATTTCGGGTGCCCTGGGACTGATCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR CCA 90 bp | GGCGGCCTGCCTTCCCCACGACGTAGACGACTGTGTTCTCCTCGGACCCCTGAATCGAGGGAAAAGCGATaGAAGGAATTCCATGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: GGLPSPRRRRLCSPRTPESREKR*KEFHDF Trigger: AAAGTCATGGAATTCCTTCCATCGCTTTTCCCTCGA...TTCAGGGGTCCGAGGAGAACACAGTCGTCTACGTCGTGGGGAAGGCAGGCCGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
||
| CDS-3UTR TCA 90 bp | GGCGGCCTGCCTTCCCCACGACGTAGACGACTGTGTTCTCCTCGGACCCCTGAAGAACAGATTTGTTTTTaGTCTGGTGGCGACATATCA | + |
|
Preference number: 4 (lower is better) Translates to: GGLPSPRRRRLCSPRTPEEQICF*SGGDIS Trigger: TGATATGTCGCCACCAGATCAAAAACAAATCTGTTC...TTCAGGGGTCCGAGGAGAACACAGTCGTCTACGTCGTGGGGAAGGCAGGCCGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
||
| CDS-3UTR GCA 90 bp | TCTTTCGTCGCCTCTGGCGCTGTCTGCAGTGGCTTTGTTGTCTGGGGTTCTACATCCTCGCAGGCTTGCTaGACTTCCGTTTCTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SFVASGAVCSGFVVWGSTSSQAC*TSVSSR Trigger: TCTGGAAGAAACGGAAGTGCAGCAAGCCTGCGAGGA...TGTAGAACCCCAGACAACAAAGCCACTGCAGACAGCGCCAGAGGCGACGAAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
||
| CDS-3UTR GCA 90 bp | GTGGTGGTGGTGGTGGTGGTATGGGCTGAGCAGGGTCTTACGATGTTGCCCAGGACAGCTTGGAGTGTTTaGACAGCAACTGTAACACTG | + |
|
Preference number: 4 (lower is better) Translates to: VVVVVVVWAEQGLTMLPRTAWSV*TATVTL Trigger: CAGTGTTACAGTTGCTGTGCAAACACTCCAAGCTGT...CCTGGGCAACATCGTAAGACCCTGCTCAGCCCATACCACCACCACCACCACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR GCA 90 bp | AGGGCACCCGAAATAACAAAAGCATTACCATCAGCTGCATCACATGACTGGTCTCCAGTGCTGGCGGCCTaGCTTCCCCACGACGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RAPEITKALPSAASHDWSPVLAA*LPHDVD Trigger: GTCTACGTCGTGGGGAAGGCAGGCCGCCAGCACTGG...AGACCAGTCATGTGATGCAGCTGATGGTAATGCTTTTGTTATTTCGGGTGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR TCA 90 bp | TGTCTGGGGTTCTACAGAGGTGTGACGCTGGAGGCTGGGTGTCAGGTCTTCCTCATGGAAGGAATTCCATaGCTTTGGGGAATTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CLGFYRGVTLEAGCQVFLMEGIP*LWGIAE Trigger: CTCTGCAATTCCCCAAAGTCATGGAATTCCTTCCAT...GAGGAAGACCTGACACCCAGCCTCCAGCGTCACACCTCTGTAGAACCCCAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
||
| CDS-3UTR TCA 90 bp | GGGAGTGAGAGTATTCAACCTCATATTCTGAAACACAGAGGACACCTGTGGAGAAGCCGCCTTTCCCACTaGGGACAGTCACCGCGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSESIQPHILKHRGHLWRSRLSH*GQSPRW Trigger: CCAACGCGGTGACTGTCCTCAGTGGGAAAGGCGGCT...TCTCCACAGGTGTCCTCTGTGTTTCAGAATATGAGGTTGAATACTCTCACTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
||
| CDS-3UTR GCA 90 bp | CTTAGAAGGAATGAGACCTTGGCTTCAGTTCCAGCACCAAAAGAAGGGAGAAAGTCCCCCTCCTCCTCCTaGGCACAATCCTCCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LRRNETLASVPAPKEGRKSPSSS*AQSSSS Trigger: CGAGGAGGAGGATTGTGCGCAGGAGGAGGAGGGGGA...CTTTCTCCCTTCTTTTGGTGCTGGAACTGAAGCCAAGGTCTCATTCCTTCTAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR GCA 90 bp | TCTGGGGTTCTACAGAGGTGTGACGCTGGAGGCTGGGTGTCAGGTCTTCCTCCGAGAATATATGACCAATaGATTCTTCTGCAGGGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SGVLQRCDAGGWVSGLPPRIYDQ*ILLQGR Trigger: ACGCCCCTGCAGAAGAATGCATTGGTCATATATTCT...CGGAGGAAGACCTGACACCCAGCCTCCAGCGTCACACCTCTGTAGAACCCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
||
| CDS-3UTR GCA 90 bp | TCGGGGAGTAAATCTGAGAGGTATGCATTCCGGGTACAGCAGATCTTATCACCGCTCATCTCCTCACCCTaGTGCTCCCTTGGTGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SGSKSERYAFRVQQILSPLISSP*CSLGVD Trigger: GTCTACACCAAGGGAGCAGCAGGGTGAGGAGATGAG...CGGTGATAAGATCTGCTGTACCCGGAATGCATACCTCTCAGATTTACTCCCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
||
| CDS-3UTR GCA 90 bp | GCAGATCAGTCCCAGGGCACCCGAAATAACAAAAGCATTACCATCAGCTGCATCGAGGAGGCGATGTCTTaGTCGGCCTCGTACAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ADQSQGTRNNKSITISCIEEAMS*SASYSS Trigger: TGAACTGTACGAGGCCGAGCAAGACATCGCCTCCTC...GATGCAGCTGATGGTAATGCTTTTGTTATTTCGGGTGCCCTGGGACTGATCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR GCA 90 bp | TCGGGGAGTAAATCTGAGAGGTATGCATTCCGGGTACAGCAGATCTTATCACCGGAGGAGGCGATGTCTTaGTCGGCCTCGTACAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SGSKSERYAFRVQQILSPEEAMS*SASYSS Trigger: TGAACTGTACGAGGCCGAGCAAGACATCGCCTCCTC...CGGTGATAAGATCTGCTGTACCCGGAATGCATACCTCTCAGATTTACTCCCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
||
| CDS-3UTR CCA 90 bp | TGTCCCCTGTCAACTGTTCTCACGAGGACAGAGGCTGAAATCATCATGGTTTTCCCATCTCCTGATTGCTaGGATCGTTGGCGTCGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: CPLSTVLTRTEAEIIMVFPSPDC*DRWRRP Trigger: CGGACGACGCCAACGATCCCAGCAATCAGGAGATGG...GAAAACCATGATGATTTCAGCCTCTGTCCTCGTGAGAACAGTTGACAGGGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR TCA 90 bp | CCCGAAATAACAAAAGCATTACCATCAGCTGCATCACATGACTGGTCTTGTTTGAGCCGCCTTTCCCACTaGGGACAGTCACCGCGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PEITKALPSAASHDWSCLSRLSH*GQSPRW Trigger: CCAACGCGGTGACTGTCCTCAGTGGGAAAGGCGGCT...CAAACAAGACCAGTCATGTGATGCAGCTGATGGTAATGCTTTTGTTATTTCGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR CCA 90 bp | CAGCTGCCAGAGAGCTTCTTCTGCAAGAAGTGTTTCAAACGCGTCTGCCTGGGGTCTTCTGAGGCTTCCTaGTCTTGTTCAAAATCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: QLPESFFCKKCFKRVCLGSSEAS*SCSKSS Trigger: CGAGGATTTTGAACAAGACCAGGAAGCCTCAGAAGA...CCCCAGGCAGACGCGTTTGAAACACTTCTTGCAGAAGAAGCTCTCTGGCAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
||
| CDS-3UTR TCA 90 bp | AGGGCACCCGAAATAACAAAAGCATTACCATCAGCTGCATCACATGACTGGTCTTGTAGGTTATCCTCCTaGAGCCCAGCTTCCACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RAPEITKALPSAASHDWSCRLSS*SPASTA Trigger: AGCCGTGGAAGCTGGGCTTCAGGAGGATAACCTACA...AGACCAGTCATGTGATGCAGCTGATGGTAATGCTTTTGTTATTTCGGGTGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR TCA 90 bp | AGTAAATCTGAGAGGTATGCATTCCGGGTACAGCAGATCTTATCACCGACGGCAGTCAAGCCACTCTTCTaGGGCTTCCTGGTCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SKSERYAFRVQQILSPTAVKPLF*GFLVLF Trigger: GAACAAGACCAGGAAGCCTCAGAAGAGTGGCTTGAC...TGCCGTCGGTGATAAGATCTGCTGTACCCGGAATGCATACCTCTCAGATTTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
||
| CDS-3UTR GCA 90 bp | TGTCCCCTGTCAACTGTTCTCACGAGGACAGAGGCTGAAATCATCATGGTTTTCAGCCTTCCCTGTAGGTaGGGTGAGCAAGACTTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: CPLSTVLTRTEAEIIMVFSLPCR*GEQDFY Trigger: GTAGAAGTCTTGCTCACCGCACCTACAGGGAAGGCT...GAAAACCATGATGATTTCAGCCTCTGTCCTCGTGAGAACAGTTGACAGGGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR GCA 90 bp | AGAAATGCTGCAGATCAGTCCCAGGGCACCCGAAATAACAAAAGCATTACCATCTTGAGGGTGCGCAGCTaGCAGAGAGCTTCTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RNAADQSQGTRNNKSITILRVRS*QRASSA Trigger: TGCAGAAGAAGCTCTCTGGCAGCTGCGCACCCTCAA...GATGGTAATGCTTTTGTTATTTCGGGTGCCCTGGGACTGATCTGCAGCATTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR TCA 90 bp | TGTCCCCTGTCAACTGTTCTCACGAGGACAGAGGCTGAAATCATCATGGTTTTCTTCTTTTGGACCCTCTaGGCTGTGCTGACTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CPLSTVLTRTEAEIIMVFFFWTL*AVLTPH Trigger: ATGAGGAGTCAGCACAGCTCAGAGGGTCCAAAAGAA...GAAAACCATGATGATTTCAGCCTCTGTCCTCGTGAGAACAGTTGACAGGGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR TCA 90 bp | GCAGATCAGTCCCAGGGCACCCGAAATAACAAAAGCATTACCATCAGCTGCATCGCCGTACCTGTGTCTTaGTTGTCGGTGGGTTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ADQSQGTRNNKSITISCIAVPVS*LSVGLK Trigger: TTTTAAACCCACCGACAATCAAGACACAGGTACGGC...GATGCAGCTGATGGTAATGCTTTTGTTATTTCGGGTGCCCTGGGACTGATCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR GCA 90 bp | AAACTGACGTCTGGAGATTCTTGTAGCATTGTCCACAATCAGCTGAGACTCTGTCTTGCTCCCTTCCACTaGCTCAGCACTTCCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: KLTSGDSCSIVHNQLRLCLAPFH*LSTSWI Trigger: GATCCAGGAAGTGCTGAGGCAGTGGAAGGGAGCAAG...ACAGAGTCTCAGCTGATTGTGGACAATGCTACAAGAATCTCCAGACGTCAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
||
| CDS-3UTR CCA 90 bp | CATGTGCCCAAAATTACAAATGCCCAAAACCATAATGCTGTCTTCTCAGAGTTTACATGTTGCCAGTGCTaGCGGCCTGCCTTCCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: HVPKITNAQNHNAVFSEFTCCQC*RPAFPT Trigger: CGTGGGGAAGGCAGGCCGCCAGCACTGGCAACATGT...AAACTCTGAGAAGACAGCATTATGGTTTTGGGCATTTGTAATTTTGGGCACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR GCA 90 bp | TTTTGGAAACTGACGTCTGGAGATTCTTGTAGCATTGTCCACAATCAGCTGAGAGGAAGATCGGTCCTCTaGCTCAATAAGCCAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FWKLTSGDSCSIVHNQLRGRSVL*LNKPAA Trigger: GGCTGCTGGCTTATTGAGGCAGAGGACCGATCTTCC...TCTCAGCTGATTGTGGACAATGCTACAAGAATCTCCAGACGTCAGTTTCCAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
||
| CDS-3UTR CCA 90 bp | CCCGAAATAACAAAAGCATTACCATCAGCTGCATCACATGACTGGTCTTGTTTGTGGCGCTGTCTGCAGTaGCTTTGTTGTCTGGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PEITKALPSAASHDWSCLWRCLQ*LCCLGF Trigger: GAACCCCAGACAACAAAGCCACTGCAGACAGCGCCA...CAAACAAGACCAGTCATGTGATGCAGCTGATGGTAATGCTTTTGTTATTTCGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR TCA 90 bp | CCCGAAATAACAAAAGCATTACCATCAGCTGCATCACATGACTGGTCTTGTTTGGTCAAGCCACTCTTCTaGGGCTTCCTGGTCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PEITKALPSAASHDWSCLVKPLF*GFLVLF Trigger: GAACAAGACCAGGAAGCCTCAGAAGAGTGGCTTGAC...CAAACAAGACCAGTCATGTGATGCAGCTGATGGTAATGCTTTTGTTATTTCGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR TCA 90 bp | GCAGATCAGTCCCAGGGCACCCGAAATAACAAAAGCATTACCATCAGCTGCATCTTCAACCTCATATTCTaGAACACAGAGGACACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ADQSQGTRNNKSITISCIFNLIF*NTEDTC Trigger: ACAGGTGTCCTCTGTGTTTCAGAATATGAGGTTGAA...GATGCAGCTGATGGTAATGCTTTTGTTATTTCGGGTGCCCTGGGACTGATCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR GCA 90 bp | TTTTGGAAACTGACGTCTGGAGATTCTTGTAGCATTGTCCACAATCAGCTGAGAAGCCTTCCCTGTAGGTaGGGTGAGCAAGACTTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: FWKLTSGDSCSIVHNQLRSLPCR*GEQDFY Trigger: GTAGAAGTCTTGCTCACCGCACCTACAGGGAAGGCT...TCTCAGCTGATTGTGGACAATGCTACAAGAATCTCCAGACGTCAGTTTCCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
||
| CDS-3UTR GCA 90 bp | CTTAGAAGGAATGAGACCTTGGCTTCAGTTCCAGCACCAAAAGAAGGGAGAAAGAGTATGAATGGTCCTTaGCCAGGCATGCTTGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LRRNETLASVPAPKEGRKSMNGP*PGMLDL Trigger: CAGATCAAGCATGCCTGGGCAAGGACCATTCATACT...CTTTCTCCCTTCTTTTGGTGCTGGAACTGAAGCCAAGGTCTCATTCCTTCTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR CCA 90 bp | GCAGATCAGTCCCAGGGCACCCGAAATAACAAAAGCATTACCATCAGCTGCATCCCATACGGAATTTACTaGGGCTTTCTTCATCAAACG | + |
|
Preference number: 4 (lower is better) Translates to: ADQSQGTRNNKSITISCIPYGIY*GFLHQT Trigger: CGTTTGATGAAGAAAGCCCCAGTAAATTCCGTATGG...GATGCAGCTGATGGTAATGCTTTTGTTATTTCGGGTGCCCTGGGACTGATCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR TCA 90 bp | CTTAGAAGGAATGAGACCTTGGCTTCAGTTCCAGCACCAAAAGAAGGGAGAAAGTATAGAAGCTGTAATTaGCCTGGCACAGCGTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LRRNETLASVPAPKEGRKYRSCN*PGTACK Trigger: CTTACACGCTGTGCCAGGTCAATTACAGCTTCTATA...CTTTCTCCCTTCTTTTGGTGCTGGAACTGAAGCCAAGGTCTCATTCCTTCTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR GCA 90 bp | CATGTGCCCAAAATTACAAATGCCCAAAACCATAATGCTGTCTTCTCAGAGTTTCTTGCTCCCTTCCACTaGCTCAGCACTTCCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: HVPKITNAQNHNAVFSEFLAPFH*LSTSWI Trigger: GATCCAGGAAGTGCTGAGGCAGTGGAAGGGAGCAAG...AAACTCTGAGAAGACAGCATTATGGTTTTGGGCATTTGTAATTTTGGGCACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR GCA 90 bp | CATGTGCCCAAAATTACAAATGCCCAAAACCATAATGCTGTCTTCTCAGAGTTTGGAAGATCGGTCCTCTaGCTCAATAAGCCAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HVPKITNAQNHNAVFSEFGRSVL*LNKPAA Trigger: GGCTGCTGGCTTATTGAGGCAGAGGACCGATCTTCC...AAACTCTGAGAAGACAGCATTATGGTTTTGGGCATTTGTAATTTTGGGCACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR CCA 90 bp | AGAAATGCTGCAGATCAGTCCCAGGGCACCCGAAATAACAAAAGCATTACCATCTCTTCTGAGGCTTCCTaGTCTTGTTCAAAATCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RNAADQSQGTRNNKSITISSEAS*SCSKSS Trigger: CGAGGATTTTGAACAAGACCAGGAAGCCTCAGAAGA...GATGGTAATGCTTTTGTTATTTCGGGTGCCCTGGGACTGATCTGCAGCATTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR CCA 90 bp | GTCATGTGCCCAAAATTACAAATGCCCAAAACCATAATGCTGTCTTCTCAGAGTCACAGAGGACACCTGTaGAGATGGCGCTTCAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: VMCPKLQMPKTIMLSSQSHRGHL*RWRFNH Trigger: ATGGTTGAAGCGCCATCTCCACAGGTGTCCTCTGTG...ACTCTGAGAAGACAGCATTATGGTTTTGGGCATTTGTAATTTTGGGCACATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR TCA 90 bp | AGAAATGCTGCAGATCAGTCCCAGGGCACCCGAAATAACAAAAGCATTACCATCAGTCCTTCTCATAAATaGCCACGTCAATGTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RNAADQSQGTRNNKSITISPSHK*PRQCPS Trigger: TGAAGGACATTGACGTGGTCATTTATGAGAAGGACT...GATGGTAATGCTTTTGTTATTTCGGGTGCCCTGGGACTGATCTGCAGCATTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR TCA 90 bp | TGTCCCCTGTCAACTGTTCTCACGAGGACAGAGGCTGAAATCATCATGGTTTTCCAGAAGTCCTTTCCTTaGAGCAAAGTTTTAACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CPLSTVLTRTEAEIIMVFQKSFP*SKVLTA Trigger: TGCAGTTAAAACTTTGCTTCAAGGAAAGGACTTCTG...GAAAACCATGATGATTTCAGCCTCTGTCCTCGTGAGAACAGTTGACAGGGGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR GCA 90 bp | TGTCGGGGAGTAAATCTGAGAGGTATGCATTCCGGGTACAGCAGATCTTATCACTCTTCTCTGCATGTCTaGCTCAGCTTAGAATATATG | + |
|
Preference number: 4 (lower is better) Translates to: CRGVNLRGMHSGYSRSYHSSLHV*LSLEYM Trigger: CATATATTCTAAGCTGAGGCAGACATGCAGAGAAGA...GTGATAAGATCTGCTGTACCCGGAATGCATACCTCTCAGATTTACTCCCCGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
||
| CDS-3UTR GCA 90 bp | CATGTGCCCAAAATTACAAATGCCCAAAACCATAATGCTGTCTTCTCAGAGTTTTCCTCGCAGGCTTGCTaGACTTCCGTTTCTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HVPKITNAQNHNAVFSEFSSQAC*TSVSSR Trigger: TCTGGAAGAAACGGAAGTGCAGCAAGCCTGCGAGGA...AAACTCTGAGAAGACAGCATTATGGTTTTGGGCATTTGTAATTTTGGGCACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR GCA 90 bp | AAACTGACGTCTGGAGATTCTTGTAGCATTGTCCACAATCAGCTGAGACTCTGTGTCTCAAAGACATCCTaGAGCATGTTACCAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KLTSGDSCSIVHNQLRLCVSKTS*SMLPGS Trigger: TGAACCTGGTAACATGCTGCAGGATGTCTTTGAGAC...ACAGAGTCTCAGCTGATTGTGGACAATGCTACAAGAATCTCCAGACGTCAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
||
| CDS-3UTR GCA 90 bp | CATGTGCCCAAAATTACAAATGCCCAAAACCATAATGCTGTCTTCTCAGAGTTTCGTTGCACAGGCGGGTaGTGCTTTCGAAATCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HVPKITNAQNHNAVFSEFRCTGG*CFRNPV Trigger: AACAGGATTTCGAAAGCAGCACCCGCCTGTGCAACG...AAACTCTGAGAAGACAGCATTATGGTTTTGGGCATTTGTAATTTTGGGCACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR CCA 90 bp | CATGTGCCCAAAATTACAAATGCCCAAAACCATAATGCTGTCTTCTCAGAGTTTGGACACCTGTGGAGATaGCGCTTCAACCATACGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HVPKITNAQNHNAVFSEFGHLWR*RFNHTE Trigger: TTCCGTATGGTTGAAGCGCCATCTCCACAGGTGTCC...AAACTCTGAGAAGACAGCATTATGGTTTTGGGCATTTGTAATTTTGGGCACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR TCA 90 bp | TTCTTAGAAGGAATGAGACCTTGGCTTCAGTTCCAGCACCAAAAGAAGGGAGAAAAAGCTGTCTGGGAGTaGGAGTATTCAACCTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: FLEGMRPWLQFQHQKKGEKAVWE*EYSTSY Trigger: ATATGAGGTTGAATACTCTCACTCCCAGACAGCTTT...TTCTCCCTTCTTTTGGTGCTGGAACTGAAGCCAAGGTCTCATTCCTTCTAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR GCA 90 bp | CTTAGAAGGAATGAGACCTTGGCTTCAGTTCCAGCACCAAAAGAAGGGAGAAAGTCTTCTCTGCATGTCTaGCTCAGCTTAGAATATATG | + |
|
Preference number: 4 (lower is better) Translates to: LRRNETLASVPAPKEGRKSSLHV*LSLEYM Trigger: CATATATTCTAAGCTGAGGCAGACATGCAGAGAAGA...CTTTCTCCCTTCTTTTGGTGCTGGAACTGAAGCCAAGGTCTCATTCCTTCTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR GCA 90 bp | CCCGAAATAACAAAAGCATTACCATCAGCTGCATCACATGACTGGTCTTGTTTGGTCTCAAAGACATCCTaGAGCATGTTACCAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PEITKALPSAASHDWSCLVSKTS*SMLPGS Trigger: TGAACCTGGTAACATGCTGCAGGATGTCTTTGAGAC...CAAACAAGACCAGTCATGTGATGCAGCTGATGGTAATGCTTTTGTTATTTCGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
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| CDS-3UTR CCA 90 bp | TGTCCCCTGTCAACTGTTCTCACGAGGACAGAGGCTGAAATCATCATGGTTTTCTTCAGCATCAAATTTTaGAAACTGACGTCTGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: CPLSTVLTRTEAEIIMVFFSIKF*KLTSGD Trigger: ATCTCCAGACGTCAGTTTCCAAAATTTGATGCTGAA...GAAAACCATGATGATTTCAGCCTCTGTCCTCGTGAGAACAGTTGACAGGGGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
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| CDS-3UTR CCA 90 bp | TTCTTAGAAGGAATGAGACCTTGGCTTCAGTTCCAGCACCAAAAGAAGGGAGAAATGAGTTTCTTCTCATaGTCTTTGATGAGGTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FLEGMRPWLQFQHQKKGEMSFFS*SLMRWP Trigger: AGGCCACCTCATCAAAGACCATGAGAAGAAACTCAT...TTCTCCCTTCTTTTGGTGCTGGAACTGAAGCCAAGGTCTCATTCCTTCTAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR TCA 90 bp | CATGTGCCCAAAATTACAAATGCCCAAAACCATAATGCTGTCTTCTCAGAGTTTTTGCCCAGGCATGCTTaGTCTGACAGTTTGCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: HVPKITNAQNHNAVFSEFLPRHA*SDSLPL Trigger: TAATGGCAAACTGTCAGATCAAGCATGCCTGGGCAA...AAACTCTGAGAAGACAGCATTATGGTTTTGGGCATTTGTAATTTTGGGCACATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR GCA 90 bp | TGTCCCCTGTCAACTGTTCTCACGAGGACAGAGGCTGAAATCATCATGGTTTTCATGAGGTCACAGTCTTaGCTTCTAAATGCAATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: CPLSTVLTRTEAEIIMVFMRSQS*LLNAIN Trigger: ATTTATTGCATTTAGAAGGCAAGACTGTGACCTCAT...GAAAACCATGATGATTTCAGCCTCTGTCCTCGTGAGAACAGTTGACAGGGGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR GCA 90 bp | GTCATGTGCCCAAAATTACAAATGCCCAAAACCATAATGCTGTCTTCTCAGAGTCCAGAGAGCTTCTTCTaGAAGAAGTGTTTCAAACGC | + |
|
Preference number: 4 (lower is better) Translates to: VMCPKLQMPKTIMLSSQSPESFF*KKCFKR Trigger: GCGTTTGAAACACTTCTTGCAGAAGAAGCTCTCTGG...ACTCTGAGAAGACAGCATTATGGTTTTGGGCATTTGTAATTTTGGGCACATGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR TCA 90 bp | CATGTGCCCAAAATTACAAATGCCCAAAACCATAATGCTGTCTTCTCAGAGTTTATGGAAGGAATTCCATaGCTTTGGGGAATTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HVPKITNAQNHNAVFSEFMEGIP*LWGIAE Trigger: CTCTGCAATTCCCCAAAGTCATGGAATTCCTTCCAT...AAACTCTGAGAAGACAGCATTATGGTTTTGGGCATTTGTAATTTTGGGCACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR GCA 90 bp | CAGCTGCATCACATGACTGGTCTTGTTTGTTTACTTCCTGGTACATATAAAAGTAGAATATATGACCAATaGATTCTTCTGCAGGGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: QLHHMTGLVCLLPGTYKSRIYDQ*ILLQGR Trigger: ACGCCCCTGCAGAAGAATGCATTGGTCATATATTCT...ACTTTTATATGTACCAGGAAGTAAACAAACAAGACCAGTCATGTGATGCAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR CCA 90 bp | CAGCTGCATCACATGACTGGTCTTGTTTGTTTACTTCCTGGTACATATAAAAGTTCGAGGGAAAAGCGATaGAAGGAATTCCATGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: QLHHMTGLVCLLPGTYKSSREKR*KEFHDF Trigger: AAAGTCATGGAATTCCTTCCATCGCTTTTCCCTCGA...ACTTTTATATGTACCAGGAAGTAAACAAACAAGACCAGTCATGTGATGCAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR TCA 90 bp | CATGTGCCCAAAATTACAAATGCCCAAAACCATAATGCTGTCTTCTCAGAGTTTGAACAGATTTGTTTTTaGTCTGGTGGCGACATATCA | + |
|
Preference number: 4 (lower is better) Translates to: HVPKITNAQNHNAVFSEFEQICF*SGGDIS Trigger: TGATATGTCGCCACCAGATCAAAAACAAATCTGTTC...AAACTCTGAGAAGACAGCATTATGGTTTTGGGCATTTGTAATTTTGGGCACATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR TCA 90 bp | CAGCTGCATCACATGACTGGTCTTGTTTGTTTACTTCCTGGTACATATAAAAGTTTACATCCCGTGTTATaGAAAATATTTCCCCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QLHHMTGLVCLLPGTYKSLHPVL*KIFPRC Trigger: GCAACGGGGAAATATTTTTCATAACACGGGATGTAA...ACTTTTATATGTACCAGGAAGTAAACAAACAAGACCAGTCATGTGATGCAGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| 3UTR CAA 72 bp | CAAATGCCCAAAACCATAATGCTGTCTTCTCAGAGTTaGAAGTTTGAAACTTTGAAGCTAAAATGTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: QMPKTIMLSSQS*KFETLKLKCSS Trigger: AGATGAACATTTTAGCTTCAAAGTTTCAAACTTCAAACTCTGAGAAGACAGCATTATGGTTTTGGGCATTTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR CAA 90 bp | GCTGGCGGCCTGCCTTCCCCACGACGTAGACGACTGTGTTCTCCTCGGACCCCTCGGAAAGCCTTGAACTaGATAGCTCCTGGATCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AGGLPSPRRRRLCSPRTPRKALN*IAPGSL Trigger: CAGCGATCCAGGAGCTATCAAGTTCAAGGCTTTCCG...AGGGGTCCGAGGAGAACACAGTCGTCTACGTCGTGGGGAAGGCAGGCCGCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
||
| CDS TCA 90 bp | TCTTCTGCAGGGGCGTCATCAGCTGGAGCAGCGAGGGGCACTGACTaGACGCTGTCCAGCTGGCCTCACAGCGCACTAGTTTCATTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSAGASSAGAARGTD*TLSSWPHSALVSFL Trigger: GAGAAATGAAACTAGTGCGCTGTGAGGCCAGCTGGACAGCGTTCAGTCAGTGCCCCTCGCTGCTCCAGCTGATGACGCCCCTGCAGAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
||
| CDS TCA 90 bp | GCATTCTTCTGCAGGGGCGTCATCAGCTGGAGCAGCGAGGGGCACTaGCTGAACGCTGTCCAGCTGGCCTCACAGCGCACTAGTTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: AFFCRGVISWSSEGH*LNAVQLASQRTSFI Trigger: AATGAAACTAGTGCGCTGTGAGGCCAGCTGGACAGCGTTCAGTCAGTGCCCCTCGCTGCTCCAGCTGATGACGCCCCTGCAGAAGAATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
||
| CDS GCA 90 bp | CGTCTAAAACACTGTCACCCTGCTCTGACCCCACCTCCTCCGGCTTaGTCCCTTCCACTGCCTCAGCACTTCCTGGATCGTTGGGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RLKHCHPALTPPPPA*SLPLPQHFLDRWAL Trigger: CAAAGCCCAACGATCCAGGAAGTGCTGAGGCAGTGGAAGGGAGCAAGCCGGAGGAGGTGGGGTCAGAGCAGGGTGACAGTGTTTTAGACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
||
| CDS-3UTR CAA 90 bp | TCGGGGAGTAAATCTGAGAGGTATGCATTCCGGGTACAGCAGATCTTATCACCGGGGAGGCTGCCCGCCTaGATGCCCCCGCTGCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SGSKSERYAFRVQQILSPGRLPA*MPPLQS Trigger: ACTCTGCAGCGGGGGCATCAAGGCGGGCAGCCTCCC...CGGTGATAAGATCTGCTGTACCCGGAATGCATACCTCTCAGATTTACTCCCCGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
||
| CDS-3UTR CAA 90 bp | GTGGTGGTGGTGGTGGTGGTATGGGCTGAGCAGGGTCTTACGATGTTGCCCAGGCGGAAAGCCTTGAACTaGATAGCTCCTGGATCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VVVVVVVWAEQGLTMLPRRKALN*IAPGSL Trigger: CAGCGATCCAGGAGCTATCAAGTTCAAGGCTTTCCG...CCTGGGCAACATCGTAAGACCCTGCTCAGCCCATACCACCACCACCACCACCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS GCA 90 bp | GCGCCTCTAATTGACGCCAGGACGTTCTTCACGTCCACTTTTAAGTaGCACGGAGGTCTGCTCATCAGCTCGCAGATGGAGGAGGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: APLIDARTFFTSTFK*HGGLLISSQMEEAM Trigger: CATCGCCTCCTCCATCTGCGAGCTGATGAGCAGACCTCCGTGGCACTTAAAAGTGGACGTGAAGAACGTCCTGGCGTCAATTAGAGGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
||
| CDS GCA 90 bp | GCGGTGAGCAAGACTTCTACAGCCTTGTCCACACCGGCTGGGCTCTaGTTAGGACAGTCAAGCCACTCTTCTGAGGCTTCCTGGTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: AVSKTSTALSTPAGL*LGQSSHSSEASWSC Trigger: ACAAGACCAGGAAGCCTCAGAAGAGTGGCTTGACTGTCCTAAGCAGAGCCCAGCCGGTGTGGACAAGGCTGTAGAAGTCTTGCTCACCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
||
| CDS-3UTR CAA 90 bp | TCGGGGAGTAAATCTGAGAGGTATGCATTCCGGGTACAGCAGATCTTATCACCGCCCACCTCCTCCGGCTaGCTCCCTTCCACTGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SGSKSERYAFRVQQILSPPTSSG*LPSTAS Trigger: TGAGGCAGTGGAAGGGAGCAAGCCGGAGGAGGTGGG...CGGTGATAAGATCTGCTGTACCCGGAATGCATACCTCTCAGATTTACTCCCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
||
| CDS-3UTR CAA 90 bp | GTGGTGGTGGTGGTGGTGGTATGGGCTGAGCAGGGTCTTACGATGTTGCCCAGGATGAGCTTGGACAGCTaGGAGTGTTTGCACAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: VVVVVVVWAEQGLTMLPRMSLDS*ECLHSN Trigger: GTTGCTGTGCAAACACTCCAAGCTGTCCAAGCTCAT...CCTGGGCAACATCGTAAGACCCTGCTCAGCCCATACCACCACCACCACCACCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS CCA 90 bp | CAACCTGTAGAAAGTATGCCGGAAAGCCTTGAACTTGATAGCTCCTaGATCGCTGGGGTTTCAGGACCTGGACCTTCACGCGCCACCACG | + |
|
Preference number: 5 (lower is better) Translates to: QPVESMPESLELDSS*IAGVSGPGPSRATT Trigger: CGTGGTGGCGCGTGAAGGTCCAGGTCCTGAAACCCCAGCGATCCAGGAGCTATCAAGTTCAAGGCTTTCCGGCATACTTTCTACAGGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
||
| CDS CCA 90 bp | TTTGCGACGTGTTCGCCATTGCTTCTAACATGGTCATCGCCATCTTaGGCGTCTAAAACACTGTCACCCTGCTCTGACCCCACCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FATCSPLLLTWSSPS*ASKTLSPCSDPTSS Trigger: GGAGGAGGTGGGGTCAGAGCAGGGTGACAGTGTTTTAGACGCCCAAGATGGCGATGACCATGTTAGAAGCAATGGCGAACACGTCGCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
||
| CDS-3UTR CAA 90 bp | CCCGAAATAACAAAAGCATTACCATCAGCTGCATCACATGACTGGTCTTGTTTGGGGAGGCTGCCCGCCTaGATGCCCCCGCTGCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: PEITKALPSAASHDWSCLGRLPA*MPPLQS Trigger: ACTCTGCAGCGGGGGCATCAAGGCGGGCAGCCTCCC...CAAACAAGACCAGTCATGTGATGCAGCTGATGGTAATGCTTTTGTTATTTCGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS GCA 90 bp | TCCGTCTTCTCTGCATGTCTGCCTCAGCTTAGAATATATGACCAATaGATTCTTCTGCAGGGGCGTCATCAGCTGGAGCAGCGAGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SVFSACLPQLRIYDQ*ILLQGRHQLEQRGA Trigger: TGCCCCTCGCTGCTCCAGCTGATGACGCCCCTGCAGAAGAATGCATTGGTCATATATTCTAAGCTGAGGCAGACATGCAGAGAAGACGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
||
| CDS CCA 90 bp | GCTGGGCTCTGCTTAGGACAGTCAAGCCACTCTTCTGAGGCTTCCTaGTCTTGTTCAAAATCCTCGCAGGCTTGCTGCACTTCCGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AGLCLGQSSHSSEAS*SCSKSSQACCTSVS Trigger: AGAAACGGAAGTGCAGCAAGCCTGCGAGGATTTTGAACAAGACCAGGAAGCCTCAGAAGAGTGGCTTGACTGTCCTAAGCAGAGCCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
||
| CDS GCA 90 bp | TCCTCGCAGGCTTGCTGCACTTCCGTTTCTTCCAGATGTTCCATGTaGTTAAAAAGACGGCTAACAATGGTGGTCTTCCCACAGCCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSQACCTSVSSRCSM*LKRRLTMVVFPQPP Trigger: AGGCGGCTGTGGGAAGACCACCATTGTTAGCCGTCTTTTTAAGCACATGGAACATCTGGAAGAAACGGAAGTGCAGCAAGCCTGCGAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
||
| CDS-3UTR CAA 90 bp | CCCGAAATAACAAAAGCATTACCATCAGCTGCATCACATGACTGGTCTTGTTTGCCCACCTCCTCCGGCTaGCTCCCTTCCACTGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PEITKALPSAASHDWSCLPTSSG*LPSTAS Trigger: TGAGGCAGTGGAAGGGAGCAAGCCGGAGGAGGTGGG...CAAACAAGACCAGTCATGTGATGCAGCTGATGGTAATGCTTTTGTTATTTCGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS TCA 90 bp | TGGCCTCACAGCGCACTAGTTTCATTTCTCTGTAGGTTATCCTCCTaGAGCCCAGCTTCCACGGCTGTGTACCCAGAACATCTTCTATGC | + |
|
Preference number: 5 (lower is better) Translates to: WPHSALVSFLCRLSS*SPASTAVYPEHLLC Trigger: GCATAGAAGATGTTCTGGGTACACAGCCGTGGAAGCTGGGCTTCAGGAGGATAACCTACAGAGAAATGAAACTAGTGCGCTGTGAGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
||
| CDS-3UTR CAA 90 bp | GCAGATCAGTCCCAGGGCACCCGAAATAACAAAAGCATTACCATCAGCTGCATCAAAAATATTTCCCCGTaGCACAGGCGGGTGCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: ADQSQGTRNNKSITISCIKNISP*HRRVLL Trigger: AAGCAGCACCCGCCTGTGCAACGGGGAAATATTTTT...GATGCAGCTGATGGTAATGCTTTTGTTATTTCGGGTGCCCTGGGACTGATCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS TCA 90 bp | GCTTGGACAGCTTGGAGTGTTTGCACAGCAACTGTAACACTGACTTaGAGATCCCTACAGACACCAAACTCCCTTCGTCCACAACCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: AWTAWSVCTATVTLT*RSLQTPNSLRPQPE Trigger: TTCTGGTTGTGGACGAAGGGAGTTTGGTGTCTGTAGGGATCTTCAAGTCAGTGTTACAGTTGCTGTGCAAACACTCCAAGCTGTCCAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS CCA 90 bp | CTACAGACACCAAACTCCCTTCGTCCACAACCAGAACTCGAACCGTaGAGAATTTCCACGGCTTGTCCACCTCATTTTTCGTTTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LQTPNSLRPQPELEP*RISTACPPHFSFST Trigger: TGTGGAAAACGAAAAATGAGGTGGACAAGCCGTGGAAATTCTCCACGGTTCGAGTTCTGGTTGTGGACGAAGGGAGTTTGGTGTCTGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS TCA 90 bp | GACTTTGGGGAATTGCAGAGCTACCATTGCACTTATAAATGCGAATaGTTTTTCCACTCTCATCTCCTCACCCTGCTGCTCCCTTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: DFGELQSYHCTYKCE*FFHSHLLTLLLPWC Trigger: ACACCAAGGGAGCAGCAGGGTGAGGAGATGAGAGTGGAAAAATCATTCGCATTTATAAGTGCAATGGTAGCTCTGCAATTCCCCAAAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
||
| CDS-3UTR CAA 90 bp | TCGGGGAGTAAATCTGAGAGGTATGCATTCCGGGTACAGCAGATCTTATCACCGCGCTCAGAGGCTAAGTaGCATTCTTTAAGAAAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SGSKSERYAFRVQQILSPRSEAK*HSLRKS Trigger: GCTTTTTCTTAAAGAATGCAACTTAGCCTCTGAGCG...CGGTGATAAGATCTGCTGTACCCGGAATGCATACCTCTCAGATTTACTCCCCGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
||
| CDS-3UTR CAA 90 bp | AGAAATGCTGCAGATCAGTCCCAGGGCACCCGAAATAACAAAAGCATTACCATCGACAGCTTGGAGTGTTaGCACAGCAACTGTAACACT | + |
|
Preference number: 5 (lower is better) Translates to: RNAADQSQGTRNNKSITIDSLEC*HSNCNT Trigger: AGTGTTACAGTTGCTGTGCAAACACTCCAAGCTGTC...GATGGTAATGCTTTTGTTATTTCGGGTGCCCTGGGACTGATCTGCAGCATTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR CAA 90 bp | AAACACAGAGGACACCTGTGGAGATGGCGCTTCAACCATACGGAATTTACTGGGAAAAAGCGAACAGATTaGTTTTTGATCTGGTGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: KHRGHLWRWRFNHTEFTGKKRTD*FLIWWR Trigger: TCGCCACCAGATCAAAAACAAATCTGTTCGCTTTTT...CCCAGTAAATTCCGTATGGTTGAAGCGCCATCTCCACAGGTGTCCTCTGTGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000154501.2 |
||
| CDS-3UTR CAA 90 bp | AGAAATGCTGCAGATCAGTCCCAGGGCACCCGAAATAACAAAAGCATTACCATCAACTGTAACACTGACTaGAAGATCCCTACAGACACC | + |
|
Preference number: 5 (lower is better) Translates to: RNAADQSQGTRNNKSITINCNTD*KIPTDT Trigger: GGTGTCTGTAGGGATCTTCAAGTCAGTGTTACAGTT...GATGGTAATGCTTTTGTTATTTCGGGTGCCCTGGGACTGATCTGCAGCATTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR CAA 90 bp | TTCTTAGAAGGAATGAGACCTTGGCTTCAGTTCCAGCACCAAAAGAAGGGAGAATGCCGTACCTGTGTCTaGATTGTCGGTGGGTTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: FLEGMRPWLQFQHQKKGECRTCV*IVGGFK Trigger: TTTAAACCCACCGACAATCAAGACACAGGTACGGCA...TTCTCCCTTCTTTTGGTGCTGGAACTGAAGCCAAGGTCTCATTCCTTCTAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS GCA 90 bp | AAGTCTTTTACTTCAATGTACGTGTGTCCGTCTTCTCTGCATGTCTaGCTCAGCTTAGAATATATGACCAATGCATTCTTCTGCAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KSFTSMYVCPSSLHV*LSLEYMTNAFFCRG Trigger: GCCCCTGCAGAAGAATGCATTGGTCATATATTCTAAGCTGAGGCAGACATGCAGAGAAGACGGACACACGTACATTGAAGTAAAAGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
||
| CDS GCA 90 bp | AGTTCGATGGCACACTGTCTTGACTTAAGAGTCTCAAAGACATCCTaGAGCATGTTACCAGGTTCAATACTGGGCAACTGTCTAACATCA | + |
|
Preference number: 5 (lower is better) Translates to: SSMAHCLDLRVSKTS*SMLPGSILGNCLTS Trigger: TGATGTTAGACAGTTGCCCAGTATTGAACCTGGTAACATGCTGCAGGATGTCTTTGAGACTCTTAAGTCAAGACAGTGTGCCATCGAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
||
| CDS-3UTR CAA 90 bp | AGAAATGCTGCAGATCAGTCCCAGGGCACCCGAAATAACAAAAGCATTACCATCCGAACAGATTTGTTTTaGATCTGGTGGCGACATATC | + |
|
Preference number: 5 (lower is better) Translates to: RNAADQSQGTRNNKSITIRTDLF*IWWRHI Trigger: GATATGTCGCCACCAGATCAAAAACAAATCTGTTCG...GATGGTAATGCTTTTGTTATTTCGGGTGCCCTGGGACTGATCTGCAGCATTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR CAA 90 bp | TGTCCCCTGTCAACTGTTCTCACGAGGACAGAGGCTGAAATCATCATGGTTTTCAAAAAGCGAACAGATTaGTTTTTGATCTGGTGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: CPLSTVLTRTEAEIIMVFKKRTD*FLIWWR Trigger: TCGCCACCAGATCAAAAACAAATCTGTTCGCTTTTT...GAAAACCATGATGATTTCAGCCTCTGTCCTCGTGAGAACAGTTGACAGGGGACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR CAA 90 bp | GTCATGTGCCCAAAATTACAAATGCCCAAAACCATAATGCTGTCTTCTCAGAGTCCAAGGATGATGAGCTaGGACAGCTTGGAGTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VMCPKLQMPKTIMLSSQSPRMMS*DSLECL Trigger: CAAACACTCCAAGCTGTCCAAGCTCATCATCCTTGG...ACTCTGAGAAGACAGCATTATGGTTTTGGGCATTTGTAATTTTGGGCACATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR CAA 90 bp | AGGGCACCCGAAATAACAAAAGCATTACCATCAGCTGCATCACATGACTGGTCTGTTCAGCATCAAATTTaGGAAACTGACGTCTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RAPEITKALPSAASHDWSVQHQI*ETDVWR Trigger: TCTCCAGACGTCAGTTTCCAAAATTTGATGCTGAAC...AGACCAGTCATGTGATGCAGCTGATGGTAATGCTTTTGTTATTTCGGGTGCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR CAA 90 bp | CATGTGCCCAAAATTACAAATGCCCAAAACCATAATGCTGTCTTCTCAGAGTTTTCTGCAGTGGCTTTGTaGTCTGGGGTTCTACAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: HVPKITNAQNHNAVFSEFSAVAL*SGVLQR Trigger: CCTCTGTAGAACCCCAGACAACAAAGCCACTGCAGA...AAACTCTGAGAAGACAGCATTATGGTTTTGGGCATTTGTAATTTTGGGCACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR CAA 90 bp | ACAGAGGCTGAAATCATCATGGTTTTCTTGGATTGGGTGATTTTAGAATACCTCTTGCAGCAGCAGTCATaGATGAGGTCACAGTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: TEAEIIMVFLDWVILEYLLQQQS*MRSQSC Trigger: GCAAGACTGTGACCTCATCAATGACTGCTGCTGCAA...GAGGTATTCTAAAATCACCCAATCCAAGAAAACCATGATGATTTCAGCCTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR CAA 90 bp | AGAAATGCTGCAGATCAGTCCCAGGGCACCCGAAATAACAAAAGCATTACCATCCTTTCGAAATCCTGTTaGATTTTAGCATCGTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RNAADQSQGTRNNKSITILSKSC*ILASSS Trigger: TGACGACGATGCTAAAATCAAACAGGATTTCGAAAG...GATGGTAATGCTTTTGTTATTTCGGGTGCCCTGGGACTGATCTGCAGCATTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR CAA 90 bp | TTCTTAGAAGGAATGAGACCTTGGCTTCAGTTCCAGCACCAAAAGAAGGGAGAAGATGAGGTCACAGTCTaGCCTTCTAAATGCAATAAA | + |
|
Preference number: 5 (lower is better) Translates to: FLEGMRPWLQFQHQKKGEDEVTV*PSKCNK Trigger: TTTATTGCATTTAGAAGGCAAGACTGTGACCTCATC...TTCTCCCTTCTTTTGGTGCTGGAACTGAAGCCAAGGTCTCATTCCTTCTAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS-3UTR CAA 90 bp | CAGCTGCATCACATGACTGGTCTTGTTTGTTTACTTCCTGGTACATATAAAAGTCGCTCAGAGGCTAAGTaGCATTCTTTAAGAAAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: QLHHMTGLVCLLPGTYKSRSEAK*HSLRKS Trigger: GCTTTTTCTTAAAGAATGCAACTTAGCCTCTGAGCG...ACTTTTATATGTACCAGGAAGTAAACAAACAAGACCAGTCATGTGATGCAGCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS CAA 72 bp | ATAGACACTCGCGCGCGCCCAGGGAGGCTGCCCGCCTaGATGCCCCCGCTGCAGAGTTCCTCGGCATCCACA | + |
|
Preference number: 6 (lower is better) Translates to: IDTRARPGRLPA*MPPLQSSSAST Trigger: TGTGGATGCCGAGGAACTCTGCAGCGGGGGCATCAAGGCGGGCAGCCTCCCTGGGCGCGCGCGAGTGTCTAT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
||
| CDS CAA 90 bp | TCATCAGGGATAGACACTCGCGCGCGCCCAGGGAGGCTGCCCGCCTaGATGCCCCCGCTGCAGAGTTCCTCGGCATCCACAAACTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSGIDTRARPGRLPA*MPPLQSSSASTNSS Trigger: GGAGGAGTTTGTGGATGCCGAGGAACTCTGCAGCGGGGGCATCAAGGCGGGCAGCCTCCCTGGGCGCGCGCGAGTGTCTATCCCTGATGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
||
| CDS TCA 72 bp | TGCAGGGGCGTCATCAGCTGGAGCAGCGAGGGGCACTaGCTGAACGCTGTCCAGCTGGCCTCACAGCGCACT | + |
|
Preference number: 6 (lower is better) Translates to: CRGVISWSSEGH*LNAVQLASQRT Trigger: AGTGCGCTGTGAGGCCAGCTGGACAGCGTTCAGTCAGTGCCCCTCGCTGCTCCAGCTGATGACGCCCCTGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
||
| CDS CAA 72 bp | TCCTCCTGCGCACAATCCTCCTCCTCGTCGTCGCTCTaGTACGGGTGCAGAGGGCCCAGGAGCTCGCGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SSCAQSSSSSSL*YGCRGPRSSRR Trigger: TCTGCGCGAGCTCCTGGGCCCTCTGCACCCGTACAAGAGCGACGACGAGGAGGAGGATTGTGCGCAGGAGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
||
| CDS TCA 72 bp | GGGGCGTCATCAGCTGGAGCAGCGAGGGGCACTGACTaGACGCTGTCCAGCTGGCCTCACAGCGCACTAGTT | + |
|
Preference number: 6 (lower is better) Translates to: GASSAGAARGTD*TLSSWPHSALV Trigger: AACTAGTGCGCTGTGAGGCCAGCTGGACAGCGTTCAGTCAGTGCCCCTCGCTGCTCCAGCTGATGACGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
||
| CDS GCA 72 bp | CACTGTCACCCTGCTCTGACCCCACCTCCTCCGGCTTaGTCCCTTCCACTGCCTCAGCACTTCCTGGATCGT | + |
|
Preference number: 6 (lower is better) Translates to: HCHPALTPPPPA*SLPLPQHFLDR Trigger: ACGATCCAGGAAGTGCTGAGGCAGTGGAAGGGAGCAAGCCGGAGGAGGTGGGGTCAGAGCAGGGTGACAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
||
| CDS GCA 72 bp | TCATCGCCATCTTGGGCGTCTAAAACACTGTCACCCTaGTCTGACCCCACCTCCTCCGGCTTGCTCCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSPSWASKTLSP*SDPTSSGLLPS Trigger: GGAAGGGAGCAAGCCGGAGGAGGTGGGGTCAGAGCAGGGTGACAGTGTTTTAGACGCCCAAGATGGCGATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
||
| CDS CAA 90 bp | GCGTCTAAAACACTGTCACCCTGCTCTGACCCCACCTCCTCCGGCTaGCTCCCTTCCACTGCCTCAGCACTTCCTGGATCGTTGGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: ASKTLSPCSDPTSSG*LPSTASALPGSLGF Trigger: AAAGCCCAACGATCCAGGAAGTGCTGAGGCAGTGGAAGGGAGCAAGCCGGAGGAGGTGGGGTCAGAGCAGGGTGACAGTGTTTTAGACGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
||
| CDS CAA 90 bp | CCAGCAGCCTTCCCTGTAGGTGCGGTGAGCAAGACTTCTACAGCCTaGTCCACACCGGCTGGGCTCTGCTTAGGACAGTCAAGCCACTCT | + |
|
Preference number: 6 (lower is better) Translates to: PAAFPVGAVSKTSTA*STPAGLCLGQSSHS Trigger: AGAGTGGCTTGACTGTCCTAAGCAGAGCCCAGCCGGTGTGGACAAGGCTGTAGAAGTCTTGCTCACCGCACCTACAGGGAAGGCTGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
||
| CDS GCA 72 bp | AAGACTTCTACAGCCTTGTCCACACCGGCTGGGCTCTaGTTAGGACAGTCAAGCCACTCTTCTGAGGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: KTSTALSTPAGL*LGQSSHSSEAS Trigger: GGAAGCCTCAGAAGAGTGGCTTGACTGTCCTAAGCAGAGCCCAGCCGGTGTGGACAAGGCTGTAGAAGTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
||
| CDS GCA 72 bp | TGCCTCAGCTTAGAATATATGACCAATGCATTCTTCTaGAGGGGCGTCATCAGCTGGAGCAGCGAGGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: CLSLEYMTNAFF*RGVISWSSEGH Trigger: GTGCCCCTCGCTGCTCCAGCTGATGACGCCCCTGCAGAAGAATGCATTGGTCATATATTCTAAGCTGAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
||
| CDS GCA 72 bp | ATTGACGCCAGGACGTTCTTCACGTCCACTTTTAAGTaGCACGGAGGTCTGCTCATCAGCTCGCAGATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: IDARTFFTSTFK*HGGLLISSQME Trigger: CTCCATCTGCGAGCTGATGAGCAGACCTCCGTGGCACTTAAAAGTGGACGTGAAGAACGTCCTGGCGTCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
||
| CDS CCA 72 bp | GAAAGTATGCCGGAAAGCCTTGAACTTGATAGCTCCTaGATCGCTGGGGTTTCAGGACCTGGACCTTCACGC | + |
|
Preference number: 6 (lower is better) Translates to: ESMPESLELDSS*IAGVSGPGPSR Trigger: GCGTGAAGGTCCAGGTCCTGAAACCCCAGCGATCCAGGAGCTATCAAGTTCAAGGCTTTCCGGCATACTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
||
| CDS GCA 72 bp | GAGGCTTCCTGGTCTTGTTCAAAATCCTCGCAGGCTTaGTGCACTTCCGTTTCTTCCAGATGTTCCATGTGC | + |
|
Preference number: 6 (lower is better) Translates to: EASWSCSKSSQA*CTSVSSRCSMC Trigger: GCACATGGAACATCTGGAAGAAACGGAAGTGCAGCAAGCCTGCGAGGATTTTGAACAAGACCAGGAAGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
||
| CDS CCA 72 bp | TGCTTAGGACAGTCAAGCCACTCTTCTGAGGCTTCCTaGTCTTGTTCAAAATCCTCGCAGGCTTGCTGCACT | + |
|
Preference number: 6 (lower is better) Translates to: CLGQSSHSSEAS*SCSKSSQACCT Trigger: AGTGCAGCAAGCCTGCGAGGATTTTGAACAAGACCAGGAAGCCTCAGAAGAGTGGCTTGACTGTCCTAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
||
| CDS CCA 72 bp | CCAAACTCCCTTCGTCCACAACCAGAACTCGAACCGTaGAGAATTTCCACGGCTTGTCCACCTCATTTTTCG | + |
|
Preference number: 6 (lower is better) Translates to: PNSLRPQPELEP*RISTACPPHFS Trigger: CGAAAAATGAGGTGGACAAGCCGTGGAAATTCTCCACGGTTCGAGTTCTGGTTGTGGACGAAGGGAGTTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
||
| CDS CAA 72 bp | CCCAGCACCCAATCAGAACTCGAGCTGATGAGCCTTTaGAAGTGTCGAGGGAAAAGCGATGGAAGGAATTCC | + |
|
Preference number: 6 (lower is better) Translates to: PSTQSELELMSL*KCRGKSDGRNS Trigger: GGAATTCCTTCCATCGCTTTTCCCTCGACACTTCAAAAGGCTCATCAGCTCGAGTTCTGATTGGGTGCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
||
| CDS TCA 72 bp | AGCGCACTAGTTTCATTTCTCTGTAGGTTATCCTCCTaGAGCCCAGCTTCCACGGCTGTGTACCCAGAACAT | + |
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Preference number: 6 (lower is better) Translates to: SALVSFLCRLSS*SPASTAVYPEH Trigger: ATGTTCTGGGTACACAGCCGTGGAAGCTGGGCTTCAGGAGGATAACCTACAGAGAAATGAAACTAGTGCGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
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| CDS TCA 72 bp | ATGACCACGTCAATGTCCTTCAGAAACGCCAGAGACTaGCACGCTTCCTCGAATGACATATGCTCCGACAAG | + |
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Preference number: 6 (lower is better) Translates to: MTTSMSFRNARD*HASSNDICSDK Trigger: CTTGTCGGAGCATATGTCATTCGAGGAAGCGTGTCAGTCTCTGGCGTTTCTGAAGGACATTGACGTGGTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
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| CDS GCA 72 bp | TCTGCATGTCTGCCTCAGCTTAGAATATATGACCAATaGATTCTTCTGCAGGGGCGTCATCAGCTGGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: SACLPQLRIYDQ*ILLQGRHQLEQ Trigger: CTGCTCCAGCTGATGACGCCCCTGCAGAAGAATGCATTGGTCATATATTCTAAGCTGAGGCAGACATGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
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| CDS CAA 90 bp | AGCTTGGACAGCTTGGAGTGTTTGCACAGCAACTGTAACACTGACTaGAAGATCCCTACAGACACCAAACTCCCTTCGTCCACAACCAGA | + |
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Preference number: 6 (lower is better) Translates to: SLDSLECLHSNCNTD*KIPTDTKLPSSTTR Trigger: TCTGGTTGTGGACGAAGGGAGTTTGGTGTCTGTAGGGATCTTCAAGTCAGTGTTACAGTTGCTGTGCAAACACTCCAAGCTGTCCAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
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| CDS TCA 72 bp | GCTTGGAGTGTTTGCACAGCAACTGTAACACTGACTTaGAGATCCCTACAGACACCAAACTCCCTTCGTCCA | + |
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Preference number: 6 (lower is better) Translates to: AWSVCTATVTLT*RSLQTPNSLRP Trigger: TGGACGAAGGGAGTTTGGTGTCTGTAGGGATCTTCAAGTCAGTGTTACAGTTGCTGTGCAAACACTCCAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
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| CDS GCA 72 bp | GCTTCCTGGTCTTGTTCAAAATCCTCGCAGGCTTGCTaGACTTCCGTTTCTTCCAGATGTTCCATGTGCTTA | + |
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Preference number: 6 (lower is better) Translates to: ASWSCSKSSQAC*TSVSSRCSMCL Trigger: TAAGCACATGGAACATCTGGAAGAAACGGAAGTGCAGCAAGCCTGCGAGGATTTTGAACAAGACCAGGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
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| CDS CAA 72 bp | CTGGGCAACTGTCTAACATCACCAAGGATGATGAGCTaGGACAGCTTGGAGTGTTTGCACAGCAACTGTAAC | + |
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Preference number: 6 (lower is better) Translates to: LGNCLTSPRMMS*DSLECLHSNCN Trigger: GTTACAGTTGCTGTGCAAACACTCCAAGCTGTCCAAGCTCATCATCCTTGGTGATGTTAGACAGTTGCCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
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| CDS CAA 90 bp | TCTATGCATCCCAGCACCCAATCAGAACTCGAGCTGATGAGCCTTTaGAAGTGTCGAGGGAAAAGCGATGGAAGGAATTCCATGACTTTG | + |
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Preference number: 6 (lower is better) Translates to: SMHPSTQSELELMSL*KCRGKSDGRNSMTL Trigger: CAAAGTCATGGAATTCCTTCCATCGCTTTTCCCTCGACACTTCAAAAGGCTCATCAGCTCGAGTTCTGATTGGGTGCTGGGATGCATAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
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| CDS CAA 90 bp | GGTTCAATACTGGGCAACTGTCTAACATCACCAAGGATGATGAGCTaGGACAGCTTGGAGTGTTTGCACAGCAACTGTAACACTGACTTG | + |
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Preference number: 6 (lower is better) Translates to: GSILGNCLTSPRMMS*DSLECLHSNCNTDL Trigger: CAAGTCAGTGTTACAGTTGCTGTGCAAACACTCCAAGCTGTCCAAGCTCATCATCCTTGGTGATGTTAGACAGTTGCCCAGTATTGAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
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| CDS TCA 72 bp | CGTCTGGAGATTCTTGTAGCATTGTCCACAATCAGCTaGGACTCTGTCCTGTGGTTCGTCTTTAGTTCGATG | + |
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Preference number: 6 (lower is better) Translates to: RLEILVALSTIS*DSVLWFVFSSM Trigger: CATCGAACTAAAGACGAACCACAGGACAGAGTCTCAGCTGATTGTGGACAATGCTACAAGAATCTCCAGACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
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| CDS CAA 72 bp | TCACCAAGGATGATGAGCTTGGACAGCTTGGAGTGTTaGCACAGCAACTGTAACACTGACTTGAAGATCCCT | + |
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Preference number: 6 (lower is better) Translates to: SPRMMSLDSLEC*HSNCNTDLKIP Trigger: AGGGATCTTCAAGTCAGTGTTACAGTTGCTGTGCAAACACTCCAAGCTGTCCAAGCTCATCATCCTTGGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
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| CDS GCA 72 bp | GCACACTGTCTTGACTTAAGAGTCTCAAAGACATCCTaGAGCATGTTACCAGGTTCAATACTGGGCAACTGT | + |
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Preference number: 6 (lower is better) Translates to: AHCLDLRVSKTS*SMLPGSILGNC Trigger: ACAGTTGCCCAGTATTGAACCTGGTAACATGCTGCAGGATGTCTTTGAGACTCTTAAGTCAAGACAGTGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
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| CDS CAA 72 bp | TGTCTAACATCACCAAGGATGATGAGCTTGGACAGCTaGGAGTGTTTGCACAGCAACTGTAACACTGACTTG | + |
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Preference number: 6 (lower is better) Translates to: CLTSPRMMSLDS*ECLHSNCNTDL Trigger: CAAGTCAGTGTTACAGTTGCTGTGCAAACACTCCAAGCTGTCCAAGCTCATCATCCTTGGTGATGTTAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020449.12 |
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| CDS TCA 72 bp | GAATTGCAGAGCTACCATTGCACTTATAAATGCGAATaGTTTTTCCACTCTCATCTCCTCACCCTGCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: ELQSYHCTYKCE*FFHSHLLTLLL Trigger: GAGCAGCAGGGTGAGGAGATGAGAGTGGAAAAATCATTCGCATTTATAAGTGCAATGGTAGCTCTGCAATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
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| CDS GCA 72 bp | AATGCGAATGATTTTTCCACTCTCATCTCCTCACCCTaGTGCTCCCTTGGTGTAGACAGCTTTTTATCTTTC | + |
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Preference number: 6 (lower is better) Translates to: NANDFSTLISSP*CSLGVDSFLSF Trigger: GAAAGATAAAAAGCTGTCTACACCAAGGGAGCAGCAGGGTGAGGAGATGAGAGTGGAAAAATCATTCGCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
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| CDS GCA 72 bp | ACTTCAATGTACGTGTGTCCGTCTTCTCTGCATGTCTaGCTCAGCTTAGAATATATGACCAATGCATTCTTC | + |
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Preference number: 6 (lower is better) Translates to: TSMYVCPSSLHV*LSLEYMTNAFF Trigger: GAAGAATGCATTGGTCATATATTCTAAGCTGAGGCAGACATGCAGAGAAGACGGACACACGTACATTGAAGT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
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| CDS TCA 72 bp | ACAGTTCAGAAAGAAAGACATAGTCCTTCTCATAAATaGCCACGTCAATGTCCTTCAGAAACGCCAGAGACT | + |
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Preference number: 6 (lower is better) Translates to: TVQKERHSPSHK*PRQCPSETPET Trigger: AGTCTCTGGCGTTTCTGAAGGACATTGACGTGGTCATTTATGAGAAGGACTATGTCTTTCTTTCTGAACTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
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| CDS GCA 72 bp | AAAAGCGATGGAAGGAATTCCATGACTTTGGGGAATTaGAGAGCTACCATTGCACTTATAAATGCGAATGAT | + |
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Preference number: 6 (lower is better) Translates to: KSDGRNSMTLGN*RATIALINAND Trigger: ATCATTCGCATTTATAAGTGCAATGGTAGCTCTGCAATTCCCCAAAGTCATGGAATTCCTTCCATCGCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020449.12 ENSMUST00000154501.2 |
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