RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HECW2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000042807

Ensembl transcript IDs: ENSMUST00000087659.11, ENSMUST00000097741.3, ENSMUST00000120904.8

Found 543 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGAACATGGGACCAAATGGGAAAGGTTTGGCAGTCAAGAACTGTTaGCTGAAAGACTGTTGGGTTGTTCCATGGGCACCAAGCTCACCC +
Preference number: 1 (lower is better)
Translates to: WNMGPNGKGLAVKNC*LKDCWVVPWAPSSP
Trigger: GGGTGAGCTTGGTGCCCATGGAACAACCCAACAGTCTTTCAGTCAACAGTTCTTGACTGCCAAACCTTTCCCATTTGGTCCCATGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR TCA 90 bp ACATGGGACCAAATGGGAAAGGTTTGGCAGTCAAGAACTGTTGACTaGAAGACTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAAT +
Preference number: 1 (lower is better)
Translates to: TWDQMGKVWQSRTVD*KTVGLFHGHQAHPN
Trigger: ATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAGTCTTTCAGTCAACAGTTCTTGACTGCCAAACCTTTCCCATTTGGTCCCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR TCA 90 bp ACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTaGGCCCAGGGAAGACTTGATTCTTCTCCCCAACTGAGCACTGAG +
Preference number: 1 (lower is better)
Translates to: TTKPKSFYQLPMKSA*AQGRLDSSPQLSTE
Trigger: CTCAGTGCTCAGTTGGGGAGAAGAATCAAGTCTTCCCTGGGCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR TCA 90 bp TGCACAGTCCTTGCAGTGGTTGACATGGCAACTGTGAAGGAAGTCTaGTTTAAAAGCTACTTCTATTGTAGTCGTCAACTGATGGAGCTG +
Preference number: 1 (lower is better)
Translates to: CTVLAVVDMATVKEV*FKSYFYCSRQLMEL
Trigger: CAGCTCCATCAGTTGACGACTACAATAGAAGTAGCTTTTAAATCAGACTTCCTTCACAGTTGCCATGTCAACCACTGCAAGGACTGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR GCA 90 bp CTCTTGCTTCTACGTAATCCCCAAGAGGGCCAAATTCCTGTGCTGTaGAATTCCACCAATCACAATCAGATTTGTCTTAAATTCCTCCCA +
Preference number: 1 (lower is better)
Translates to: LLLLRNPQEGQIPVL*NSTNHNQICLKFLP
Trigger: TGGGAGGAATTTAAGACAAATCTGATTGTGATTGGTGGAATTGCACAGCACAGGAATTTGGCCCTCTTGGGGATTACGTAGAAGCAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR CCA 90 bp CATTTCACTTGCGCTAATTTAGAGATTGGGTCAGTGCTGCCAGTTTaGCTTGAAGTGTTATGTATGGGAGAGTTTCAAGATTCTCCTGAG +
Preference number: 1 (lower is better)
Translates to: HFTCANLEIGSVLPV*LEVLCMGEFQDSPE
Trigger: CTCAGGAGAATCTTGAAACTCTCCCATACATAACACTTCAAGCCAAACTGGCAGCACTGACCCAATCTCTAAATTAGCGCAAGTGAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR TCA 90 bp TTAAAAGGGTACATACTAACAAGATGCCCGAGTAAGCATGGAACATaGAGATGGAGAGGTGGTACATACAATATGGTAGGTAGGTCCTTA +
Preference number: 1 (lower is better)
Translates to: LKGYILTRCPSKHGT*RWRGGTYNMVGRSL
Trigger: TAAGGACCTACCTACCATATTGTATGTACCACCTCTCCATCTTCATGTTCCATGCTTACTCGGGCATCTTGTTAGTATGTACCCTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR TCA 90 bp CAACTGGTCCATAATCCAGTCCTAAGTGTTGTGCAACACCACTCATaGACTACTTCTAGGATGCCTATCAACAACATATATTATGTGCCT +
Preference number: 1 (lower is better)
Translates to: QLVHNPVLSVVQHHS*TTSRMPINNIYYVP
Trigger: AGGCACATAATATATGTTGTTGATAGGCATCCTAGAAGTAGTTCATGAGTGGTGTTGCACAACACTTAGGACTGGATTATGGACCAGTTG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR CCA 90 bp GTAATGTCTCTGCCATTCCTTTGCTTCTGTGCTAGACAAACTGTCTaGAAATGCAACAGAACTATAAAGCAAATAAAGTCTGACAACTGG +
Preference number: 1 (lower is better)
Translates to: VMSLPFLCFCARQTV*KCNRTIKQIKSDNW
Trigger: CCAGTTGTCAGACTTTATTTGCTTTATAGTTCTGTTGCATTTCCAGACAGTTTGTCTAGCACAGAAGCAAAGGAATGGCAGAGACATTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR TCA 90 bp AGCACATATGTGATGATGTCTTTCAGCTATACAGTTTCACATACATaGGAATGTAACCAAGCCTTTGGGGTGAATAGGCTATTCTCTCTT +
Preference number: 1 (lower is better)
Translates to: STYVMMSFSYTVSHT*ECNQAFGVNRLFSL
Trigger: AAGAGAGAATAGCCTATTCACCCCAAAGGCTTGGTTACATTCTCATGTATGTGAAACTGTATAGCTGAAAGACATCATCACATATGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR GCA 90 bp ATCATACTATCACATAGAGTGAGTCTTACAAAATTATTACTTAGATaGACAGTCCTTGCAGTGGTTGACATGGCAACTGTGAAGGAAGTC +
Preference number: 1 (lower is better)
Translates to: IILSHRVSLTKLLLR*TVLAVVDMATVKEV
Trigger: GACTTCCTTCACAGTTGCCATGTCAACCACTGCAAGGACTGTGCATCTAAGTAATAATTTTGTAAGACTCACTCTATGTGATAGTATGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR CCA 90 bp GTCTGGAAATGCAACAGAACTATAAAGCAAATAAAGTCTGACAACTaGAATATGTTTCCAAGGGGCATTCCCATTAATATCAAGTCGAGT +
Preference number: 1 (lower is better)
Translates to: VWKCNRTIKQIKSDN*NMFPRGIPINIKSS
Trigger: ACTCGACTTGATATTAATGGGAATGCCCCTTGGAAACATATTCCAGTTGTCAGACTTTATTTGCTTTATAGTTCTGTTGCATTTCCAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR GCA 90 bp TCATTGAGTAAGTTTGTCTTCAGCCATAATTACACACATACCACTTaGATATACATTGTCACAGACCACCTTATCTTTAAAGTTATCGCA +
Preference number: 1 (lower is better)
Translates to: SLSKFVFSHNYTHTT*IYIVTDHLIFKVIA
Trigger: TGCGATAACTTTAAAGATAAGGTGGTCTGTGACAATGTATATGCAAGTGGTATGTGTGTAATTATGGCTGAAGACAAACTTACTCAATGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR TCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCAGAACCGCCTGGCCATaGAGAGCTGAGCATCATGCT +
Preference number: 2 (lower is better)
Translates to: LLGCSMGTKLTPILPKELRTAWP*RAEHHA
Trigger: AGCATGATGCTCAGCTCTTCATGGCCAGGCGGTTCT...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR CAA 90 bp TTGGAACATGGGACCAAATGGGAAAGGTTTGGCAGTCAAGAACTGTaGACTGAAAGACTGTTGGGTTGTTCCATGGGCACCAAGCTCACC +
Preference number: 2 (lower is better)
Translates to: LEHGTKWERFGSQEL*TERLLGCSMGTKLT
Trigger: GGTGAGCTTGGTGCCCATGGAACAACCCAACAGTCTTTCAGTCAACAGTTCTTGACTGCCAAACCTTTCCCATTTGGTCCCATGTTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR TCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACAGCCCAGGGAAGACTTaGTTCTTCTCCCCAACTGAG +
Preference number: 2 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNSPGKT*FFSPTE
Trigger: CTCAGTTGGGGAGAAGAATCAAGTCTTCCCTGGGCT...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR CCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCTGTTGGGTTGTTCCATaGGCACCAAGCTCACCCCAA +
Preference number: 2 (lower is better)
Translates to: LDNKAQIILPATHEISLSCWVVP*APSSPQ
Trigger: TTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACA...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR CAA 90 bp AAATGGGAAAGGTTTGGCAGTCAAGAACTGTTGACTGAAAGACTGTaGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAA +
Preference number: 2 (lower is better)
Translates to: KWERFGSQELLTERL*GCSMGTKLTPILPK
Trigger: TTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAGTCTTTCAGTCAACAGTTCTTGACTGCCAAACCTTTCCCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR GCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCAGGAGCAATAGAGAATaGCCCTCAAGCCCTGGGAAA +
Preference number: 2 (lower is better)
Translates to: LDNKAQIILPATHEISLSRSNRE*PSSPGK
Trigger: TTTCCCAGGGCTTGAGGGGCATTCTCTATTGCTCCT...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR CCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACCATCATCAAATGGCATaGAGGGGCCTCCAACAGTGT +
Preference number: 2 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNHHQMA*RGLQQC
Trigger: ACACTGTTGGAGGCCCCTCCATGCCATTTGATGATG...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR CCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACCTCACATTACCAGGGTaGTACAACTGCCAGGCATCT +
Preference number: 2 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNLTLPG*YNCQAS
Trigger: AGATGCCTGGCAGTTGTACCACCCTGGTAATGTGAG...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR TCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACATTCTTCTCCCCAACTaGGCACTGAGGAGCAATAGA +
Preference number: 2 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNILLPN*ALRSNR
Trigger: TCTATTGCTCCTCAGTGCTCAGTTGGGGAGAAGAAT...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR TCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGAGCCCAGGGAAGACTTaGTTCTTCTCCCCAACTGAG +
Preference number: 2 (lower is better)
Translates to: NNESQVSGWCLFHTLASTSPGKT*FFSPTE
Trigger: CTCAGTTGGGGAGAAGAATCAAGTCTTCCCTGGGCT...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGAGCTCCATCATCAAATaGCATGGAGGGGCCTCCAAC +
Preference number: 2 (lower is better)
Translates to: NNESQVSGWCLFHTLASTSSIIK*HGGASN
Trigger: GTTGGAGGCCCCTCCATGCCATTTGATGATGGAGCT...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR TCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCGCAGTCAAGAACTGTTaGCTGAAAGACTGTTGGGTT +
Preference number: 2 (lower is better)
Translates to: LDNKAQIILPATHEISLSAVKNC*LKDCWV
Trigger: AACCCAACAGTCTTTCAGTCAACAGTTCTTGACTGC...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR TCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCAGTAAGCATGGAACATaGAGATGGAGAGGTGGTACA +
Preference number: 2 (lower is better)
Translates to: LDNKAQIILPATHEISLSSKHGT*RWRGGT
Trigger: TGTACCACCTCTCCATCTTCATGTTCCATGCTTACT...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR TCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACTTTGCCATGAATGCATaGATGCACTCCTTTCTCCGT +
Preference number: 2 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNFAMNA*MHSFLR
Trigger: ACGGAGAAAGGAGTGCATTCATGCATTCATGGCAAA...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR GCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGAGGAGCAATAGAGAATaGCCCTCAAGCCCTGGGAAA +
Preference number: 2 (lower is better)
Translates to: NNESQVSGWCLFHTLASTRSNRE*PSSPGK
Trigger: TTTCCCAGGGCTTGAGGGGCATTCTCTATTGCTCCT...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR CCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACCCCATAGGCAGTAAATaGAAACAATGCACCTTCGAG +
Preference number: 2 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNPIGSK*KQCTFE
Trigger: CTCGAAGGTGCATTGTTTCCATTTACTGCCTATGGG...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR TCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACTCAAGAACTGTTGACTaGAAGACTGTTGGGTTGTTC +
Preference number: 2 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNSRTVD*KTVGLF
Trigger: GAACAACCCAACAGTCTTTCAGTCAACAGTTCTTGA...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR TCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCGTTTCAAGATTCTCCTaGGTCCCTAAAAGTCACCAT +
Preference number: 2 (lower is better)
Translates to: LDNKAQIILPATHEISLSVSRFS*VPKSHH
Trigger: ATGGTGACTTTTAGGGACTCAGGAGAATCTTGAAAC...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR TCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCTTCACACTTGTCCTGTaGAGGTTGAAACCTATAGTG +
Preference number: 2 (lower is better)
Translates to: LDNKAQIILPATHEISLSFTLVL*RLKPIV
Trigger: CACTATAGGTTTCAACCTTCACAGGACAAGTGTGAA...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR TCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACATGGAACTCTTACTATaGAAGAGAGCTGATCTCTCC +
Preference number: 2 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNMELLL*KRADLS
Trigger: GGAGAGATCAGCTCTCTTTCATAGTAAGAGTTCCAT...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR TCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACGCATCTTTGATAGTTTaGAGATCCTTGTGTTGCTCC +
Preference number: 2 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNASLIV*RSLCCS
Trigger: GGAGCAACACAAGGATCTTCAAACTATCAAAGATGC...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR TCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCTGCACAAGAAAAATGTaGTTCCATATGTGGCTTGGG +
Preference number: 2 (lower is better)
Translates to: LDNKAQIILPATHEISLSCTRKM*FHMWLG
Trigger: CCCAAGCCACATATGGAATCACATTTTTCTTGTGCA...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR TCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGATTCTTCTCCCCAACTaGGCACTGAGGAGCAATAGA +
Preference number: 2 (lower is better)
Translates to: NNESQVSGWCLFHTLASTILLPN*ALRSNR
Trigger: TCTATTGCTCCTCAGTGCTCAGTTGGGGAGAAGAAT...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR GCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACGCCACACTTCCATTTTaGAATCTGCATTCCCTTTCT +
Preference number: 2 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNATLPF*NLHSLS
Trigger: AGAAAGGGAATGCAGATTGCAAAATGGAAGTGTGGC...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR GCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACAAGAAAAACAGAAGCTaGTATGGTCCCTCCACATCA +
Preference number: 2 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNKKNRS*YGPSTS
Trigger: TGATGTGGAGGGACCATAGCAGCTTCTGTTTTTCTT...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR GCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACAATGGCCTCATTTCCTaGTCCTGGGATTTCCTAAAT +
Preference number: 2 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNNGLIS*SWDFLN
Trigger: ATTTAGGAAATCCCAGGAGCAGGAAATGAGGCCATT...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR CCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCGTGTCCCTTCGCCTTTaGTACTTTCAGTGCAAAATA +
Preference number: 2 (lower is better)
Translates to: LDNKAQIILPATHEISLSVSLRL*YFQCKI
Trigger: TATTTTGCACTGAAAGTACCAAAGGCGAAGGGACAC...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR TCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCAGTGTGCCTGTACTCTaGAAAATGATACATACATGG +
Preference number: 2 (lower is better)
Translates to: LDNKAQIILPATHEISLSSVPVL*KMIHTW
Trigger: CCATGTATGTATCATTTTTCAGAGTACAGGCACACT...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR TCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCCTATGTGCATTTTTCTaGAGGCCAGATTCAGAATCT +
Preference number: 2 (lower is better)
Translates to: LDNKAQIILPATHEISLSLCAFF*RPDSES
Trigger: AGATTCTGAATCTGGCCTTCAGAAAAATGCACATAG...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR TCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCAGCATTGATATTCTATaGCACTCAGCAGAAAGAGCA +
Preference number: 2 (lower is better)
Translates to: LDNKAQIILPATHEISLSSIDIL*HSAERA
Trigger: TGCTCTTTCTGCTGAGTGTCATAGAATATCAATGCT...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR TCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACGAGACTTATCAGCATTaGTATTCTATGACACTCAGC +
Preference number: 2 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNETYQH*YSMTLS
Trigger: GCTGAGTGTCATAGAATATCAATGCTGATAAGTCTC...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR GCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCAAGAATGTCTGGAAGTaGCACACTTCCATTTTGCAA +
Preference number: 2 (lower is better)
Translates to: LDNKAQIILPATHEISLSKNVWK*HTSILQ
Trigger: TTGCAAAATGGAAGTGTGGCACTTCCAGACATTCTT...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR GCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGCGCCTTTGCCATGAATaGATGAATGCACTCCTTTCT +
Preference number: 2 (lower is better)
Translates to: NNESQVSGWCLFHTLASTRLCHE*MNALLS
Trigger: AGAAAGGAGTGCATTCATGCATTCATGGCAAAGGCG...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR CCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACGTTCTTCTTTTATCTTaGAACATGGGACCAAATGGG +
Preference number: 2 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNVLLLS*NMGPNG
Trigger: CCCATTTGGTCCCATGTTCCAAGATAAAAGAAGAAC...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR CCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACATGAAGATGGAGAGGTaGTACATACAATATGGTAGG +
Preference number: 2 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNMKMER*YIQYGR
Trigger: CCTACCATATTGTATGTACCACCTCTCCATCTTCAT...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR TCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCTCATTAGTGATTCATTaGGTAAGTTTGTCTTCAGCC +
Preference number: 2 (lower is better)
Translates to: LDNKAQIILPATHEISLSSLVIH*VSLSSA
Trigger: GGCTGAAGACAAACTTACTCAATGAATCACTAATGA...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR TCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCTTGACATGGCAACTGTaGAGGAAGTCTGATTTAAAA +
Preference number: 2 (lower is better)
Translates to: LDNKAQIILPATHEISLSLTWQL*RKSDLK
Trigger: TTTTAAATCAGACTTCCTTCACAGTTGCCATGTCAA...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR TCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACCCAAAGCAATCGAAATaGAGGAAATCCTTTTCATCA +
Preference number: 2 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNPKQSK*RKSFSS
Trigger: TGATGAAAAGGATTTCCTTCATTTCGATTGCTTTGG...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR TCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCTTTAAAACTGTTATTTaGGAAGTTGGCTGCCTTAGC +
Preference number: 2 (lower is better)
Translates to: LDNKAQIILPATHEISLSFKTVI*EVGCLS
Trigger: GCTAAGGCAGCCAACTTCTCAAATAACAGTTTTAAA...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR TCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACCTGTACTCTGAAAAATaGTACATACATGGTGTATCG +
Preference number: 2 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNLYSEK*YIHGVS
Trigger: CGATACACCATGTATGTATCATTTTTCAGAGTACAG...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR TCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGTGCACAAGAAAAATGTaGTTCCATATGTGGCTTGGG +
Preference number: 2 (lower is better)
Translates to: NNESQVSGWCLFHTLASTCTRKM*FHMWLG
Trigger: CCCAAGCCACATATGGAATCACATTTTTCTTGTGCA...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR TCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCTACACTAGAAAACTGTaGCTTCCATTCATTTTGTGC +
Preference number: 2 (lower is better)
Translates to: LDNKAQIILPATHEISLSYTRKL*LPFILC
Trigger: GCACAAAATGAATGGAAGTCACAGTTTTCTAGTGTA...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR GCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACTACACACATACCACTTaGATATACATTGTCACAGAC +
Preference number: 2 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNYTHTT*IYIVTD
Trigger: GTCTGTGACAATGTATATGCAAGTGGTATGTGTGTA...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGCAAATGGGAAAGGTTTaGCAGTCAAGAACTGTTGAC +
Preference number: 2 (lower is better)
Translates to: NNESQVSGWCLFHTLASTQMGKV*QSRTVD
Trigger: GTCAACAGTTCTTGACTGCCAAACCTTTCCCATTTG...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR CCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACTGTATGAATGCATTTTaGATCTCGAGACTTATCAGC +
Preference number: 2 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNCMNAF*ISRLIS
Trigger: GCTGATAAGTCTCGAGATCCAAAATGCATTCATACA...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR CCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCTGTATGAATGCATTTTaGATCTCGAGACTTATCAGC +
Preference number: 2 (lower is better)
Translates to: LDNKAQIILPATHEISLSCMNAF*ISRLIS
Trigger: GCTGATAAGTCTCGAGATCCAAAATGCATTCATACA...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR TCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGAGTGTGCCTGTACTCTaGAAAATGATACATACATGG +
Preference number: 2 (lower is better)
Translates to: NNESQVSGWCLFHTLASTSVPVL*KMIHTW
Trigger: CCATGTATGTATCATTTTTCAGAGTACAGGCACACT...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR TCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGCTATGTGCATTTTTCTaGAGGCCAGATTCAGAATCT +
Preference number: 2 (lower is better)
Translates to: NNESQVSGWCLFHTLASTLCAFF*RPDSES
Trigger: AGATTCTGAATCTGGCCTTCAGAAAAATGCACATAG...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR GCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACAAATTATTACTTAGATaGACAGTCCTTGCAGTGGTT +
Preference number: 2 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNKLLLR*TVLAVV
Trigger: AACCACTGCAAGGACTGTGCATCTAAGTAATAATTT...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR GCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCAAATTATTACTTAGATaGACAGTCCTTGCAGTGGTT +
Preference number: 2 (lower is better)
Translates to: LDNKAQIILPATHEISLSKLLLR*TVLAVV
Trigger: AACCACTGCAAGGACTGTGCATCTAAGTAATAATTT...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR GCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGCAAATTCCTGTGCTGTaGAATTCCACCAATCACAAT +
Preference number: 2 (lower is better)
Translates to: NNESQVSGWCLFHTLASTQIPVL*NSTNHN
Trigger: ATTGTGATTGGTGGAATTGCACAGCACAGGAATTTG...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGGTTCTTCTTTTATCTTaGAACATGGGACCAAATGGG +
Preference number: 2 (lower is better)
Translates to: NNESQVSGWCLFHTLASTVLLLS*NMGPNG
Trigger: CCCATTTGGTCCCATGTTCCAAGATAAAAGAAGAAC...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR TCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGTCATTAGTGATTCATTaGGTAAGTTTGTCTTCAGCC +
Preference number: 2 (lower is better)
Translates to: NNESQVSGWCLFHTLASTSLVIH*VSLSSA
Trigger: GGCTGAAGACAAACTTACTCAATGAATCACTAATGA...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR TCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGCTGTACTCTGAAAAATaGTACATACATGGTGTATCG +
Preference number: 2 (lower is better)
Translates to: NNESQVSGWCLFHTLASTLYSEK*YIHGVS
Trigger: CGATACACCATGTATGTATCATTTTTCAGAGTACAG...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR GCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGTACACACATACCACTTaGATATACATTGTCACAGAC +
Preference number: 2 (lower is better)
Translates to: NNESQVSGWCLFHTLASTYTHTT*IYIVTD
Trigger: GTCTGTGACAATGTATATGCAAGTGGTATGTGTGTA...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR GCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGCACATATTGTATGAATaGATTTTGGATCTCGAGACT +
Preference number: 2 (lower is better)
Translates to: NNESQVSGWCLFHTLASTHILYE*ILDLET
Trigger: AGTCTCGAGATCCAAAATGCATTCATACAATATGTG...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGTATCGCATAATGACTTaGTTTCCTTTTTCACACTTG +
Preference number: 2 (lower is better)
Translates to: NNESQVSGWCLFHTLASTYRIMT*FPFSHL
Trigger: CAAGTGTGAAAAAGGAAACCAAGTCATTATGCGATA...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR CAA 90 bp AGTTTGTCTTCAGCCATAATTACACACATACCACTTGCATATACATaGTCACAGACCACCTTATCTTTAAAGTTATCGCATAATGACTTG +
Preference number: 2 (lower is better)
Translates to: SLSSAIITHIPLAYT*SQTTLSLKLSHNDL
Trigger: CAAGTCATTATGCGATAACTTTAAAGATAAGGTGGTCTGTGACAATGTATATGCAAGTGGTATGTGTGTAATTATGGCTGAAGACAAACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR TCA 72 bp ACAATGCACCTTCGAGACGCCTTTGCCATGAATGCATaGATGCACTCCTTTCTCCGTGCCCTCGGCAGGAGT +
Preference number: 3 (lower is better)
Translates to: TMHLRDAFAMNA*MHSFLRALGRS
Trigger: ACTCCTGCCGAGGGCACGGAGAAAGGAGTGCATTCATGCATTCATGGCAAAGGCGTCTCGAAGGTGCATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR GCA 72 bp GGAAACAATGCACCTTCGAGACGCCTTTGCCATGAATaGATGAATGCACTCCTTTCTCCGTGCCCTCGGCAG +
Preference number: 3 (lower is better)
Translates to: GNNAPSRRLCHE*MNALLSPCPRQ
Trigger: CTGCCGAGGGCACGGAGAAAGGAGTGCATTCATGCATTCATGGCAAAGGCGTCTCGAAGGTGCATTGTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR CCA 72 bp AGAAAAACAGAAGCTGCTATGGTCCCTCCACATCACTaGGGTTCAGCTGCCAGGCCTCTGAAGACTCAAGGA +
Preference number: 3 (lower is better)
Translates to: RKTEAAMVPPHH*GSAARPLKTQG
Trigger: TCCTTGAGTCTTCAGAGGCCTGGCAGCTGAACCCCAGTGATGTGGAGGGACCATAGCAGCTTCTGTTTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR GCA 72 bp GGATACCACTCATCAACAGCTGGCCTGAGTCTCAACTaGTGGGAGGTTGGGCCAGTTTCTTCAATTGCATCT +
Preference number: 3 (lower is better)
Translates to: GYHSSTAGLSLN*WEVGPVSSIAS
Trigger: AGATGCAATTGAAGAAACTGGCCCAACCTCCCAGCAGTTGAGACTCAGGCCAGCTGTTGATGAGTGGTATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR TCA 72 bp AGCAGCACTCAGTTTGTTATAATGGAAGCCAAGGCTTaGGGCTACCAATGCTGTGTCCACTTTTCGGGAGGC +
Preference number: 3 (lower is better)
Translates to: SSTQFVIMEAKA*GYQCCVHFSGG
Trigger: GCCTCCCGAAAAGTGGACACAGCATTGGTAGCCTCAAGCCTTGGCTTCCATTATAACAAACTGAGTGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR TCA 72 bp TGGCATGGAGGGGCCTCCAACAGTGTGCCTGTACTCTaGAAAATGATACATACATGGTGTATCGAGACTGTC +
Preference number: 3 (lower is better)
Translates to: WHGGASNSVPVL*KMIHTWCIETV
Trigger: GACAGTCTCGATACACCATGTATGTATCATTTTTCAGAGTACAGGCACACTGTTGGAGGCCCCTCCATGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR GCA 72 bp GCAGTAAATGGAAACAATGCACCTTCGAGACGCCTTTaGCATGAATGCATGAATGCACTCCTTTCTCCGTGC +
Preference number: 3 (lower is better)
Translates to: AVNGNNAPSRRL*HECMNALLSPC
Trigger: GCACGGAGAAAGGAGTGCATTCATGCATTCATGGCAAAGGCGTCTCGAAGGTGCATTGTTTCCATTTACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR CAA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCAATGGAAGCCAAGGCTaGAGGCTACCAATGCTGTGT +
Preference number: 3 (lower is better)
Translates to: LDNKAQIILPATHEISLSNGSQG*RLPMLC
Trigger: ACACAGCATTGGTAGCCTCAAGCCTTGGCTTCCATT...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR CAA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACGGCCCTTTAGTTCCCTaGAGCGTGCTTAAAAGGGTA +
Preference number: 3 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNGPLVP*SVLKRV
Trigger: TACCCTTTTAAGCACGCTCAAGGGAACTAAAGGGCC...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR TCA 72 bp CAAATGGGAAAGGTTTGGCAGTCAAGAACTGTTGACTaGAAGACTGTTGGGTTGTTCCATGGGCACCAAGCT +
Preference number: 3 (lower is better)
Translates to: QMGKVWQSRTVD*KTVGLFHGHQA
Trigger: AGCTTGGTGCCCATGGAACAACCCAACAGTCTTTCAGTCAACAGTTCTTGACTGCCAAACCTTTCCCATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR GCA 72 bp AAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTaGTTCTACGTAATCCCCAAGAGGGCCAAATTCCTG +
Preference number: 3 (lower is better)
Translates to: KPGLWLVSFSYS*FYVIPKRAKFL
Trigger: CAGGAATTTGGCCCTCTTGGGGATTACGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR CAA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCGGCAGTCAAGAACTGTaGACTGAAAGACTGTTGGGT +
Preference number: 3 (lower is better)
Translates to: LDNKAQIILPATHEISLSGSQEL*TERLLG
Trigger: ACCCAACAGTCTTTCAGTCAACAGTTCTTGACTGCC...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR CAA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCTGCTGCCAGTTTGGCTaGAAGTGTTATGTATGGGAG +
Preference number: 3 (lower is better)
Translates to: LDNKAQIILPATHEISLSCCQFG*KCYVWE
Trigger: CTCCCATACATAACACTTCAAGCCAAACTGGCAGCA...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR CAA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCTTAGATGCACAGTCCTaGCAGTGGTTGACATGGCAA +
Preference number: 3 (lower is better)
Translates to: LDNKAQIILPATHEISLSLDAQS*QWLTWQ
Trigger: TTGCCATGTCAACCACTGCAAGGACTGTGCATCTAA...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR CAA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGGGCCCTTTAGTTCCCTaGAGCGTGCTTAAAAGGGTA +
Preference number: 3 (lower is better)
Translates to: NNESQVSGWCLFHTLASTGPLVP*SVLKRV
Trigger: TACCCTTTTAAGCACGCTCAAGGGAACTAAAGGGCC...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR CAA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCTGCCACACTTCCATTTaGCAATCTGCATTCCCTTTC +
Preference number: 3 (lower is better)
Translates to: LDNKAQIILPATHEISLSCHTSI*QSAFPF
Trigger: GAAAGGGAATGCAGATTGCAAAATGGAAGTGTGGCA...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR CCA 72 bp AACAAAATCAGAAGTGTACCTGTTAACTGTGATCTATaGTATAGTGGATGTAATGAGTGGGCGGGGCTGGTG +
Preference number: 3 (lower is better)
Translates to: NKIRSVPVNCDL*YSGCNEWAGLV
Trigger: CACCAGCCCCGCCCACTCATTACATCCACTATACCATAGATCACAGTTAACAGGTACACTTCTGATTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR CAA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACGGTTCTTCTTTTATCTaGGAACATGGGACCAAATGG +
Preference number: 3 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNGSSFI*EHGTKW
Trigger: CCATTTGGTCCCATGTTCCAAGATAAAAGAAGAACC...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR CAA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGTGCTGCCAGTTTGGCTaGAAGTGTTATGTATGGGAG +
Preference number: 3 (lower is better)
Translates to: NNESQVSGWCLFHTLASTCCQFG*KCYVWE
Trigger: CTCCCATACATAACACTTCAAGCCAAACTGGCAGCA...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR CAA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACCCACTTGCATATACATaGTCACAGACCACCTTATCT +
Preference number: 3 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNPLAYT*SQTTLS
Trigger: AGATAAGGTGGTCTGTGACAATGTATATGCAAGTGG...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR CAA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACAATGCTTTTGGAATCTaGATGTCCCCTCTAGTAGAC +
Preference number: 3 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNNAFGI*MSPLVD
Trigger: GTCTACTAGAGGGGACATCAAGATTCCAAAAGCATT...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR CAA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCAATGCTTTTGGAATCTaGATGTCCCCTCTAGTAGAC +
Preference number: 3 (lower is better)
Translates to: LDNKAQIILPATHEISLSNAFGI*MSPLVD
Trigger: GTCTACTAGAGGGGACATCAAGATTCCAAAAGCATT...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR CAA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGGATTCCATATGTGGCTaGGGCTCAGGAACTGTGATA +
Preference number: 3 (lower is better)
Translates to: NNESQVSGWCLFHTLASTDSICG*GSGTVI
Trigger: TATCACAGTTCCTGAGCCCAAGCCACATATGGAATC...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR TCA 72 bp CTTGATGTCCCCTCTAGTAGACTATGTGCATTTTTCTaGAGGCCAGATTCAGAATCTTGTAGCTCCATCATC +
Preference number: 3 (lower is better)
Translates to: LDVPSSRLCAFF*RPDSESCSSII
Trigger: GATGATGGAGCTACAAGATTCTGAATCTGGCCTTCAGAAAAATGCACATAGTCTACTAGAGGGGACATCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR TCA 72 bp CATAATGCCAGCTCCTTAGAATGTAGTTTTTGCTCCTaGATCTTGATAGTAGTTGGGCTCACATTACCAGGG +
Preference number: 3 (lower is better)
Translates to: HNASSLECSFCS*ILIVVGLTLPG
Trigger: CCCTGGTAATGTGAGCCCAACTACTATCAAGATTCAGGAGCAAAAACTACATTCTAAGGAGCTGGCATTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR GCA 72 bp CTACGTAATCCCCAAGAGGGCCAAATTCCTGTGCTGTaGAATTCCACCAATCACAATCAGATTTGTCTTAAA +
Preference number: 3 (lower is better)
Translates to: LRNPQEGQIPVL*NSTNHNQICLK
Trigger: TTTAAGACAAATCTGATTGTGATTGGTGGAATTGCACAGCACAGGAATTTGGCCCTCTTGGGGATTACGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR CCA 72 bp TGCGCTAATTTAGAGATTGGGTCAGTGCTGCCAGTTTaGCTTGAAGTGTTATGTATGGGAGAGTTTCAAGAT +
Preference number: 3 (lower is better)
Translates to: CANLEIGSVLPV*LEVLCMGEFQD
Trigger: ATCTTGAAACTCTCCCATACATAACACTTCAAGCCAAACTGGCAGCACTGACCCAATCTCTAAATTAGCGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR CAA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGAGTGTCCCTTCGCCTTaGGTACTTTCAGTGCAAAAT +
Preference number: 3 (lower is better)
Translates to: NNESQVSGWCLFHTLASTSVPSP*VLSVQN
Trigger: ATTTTGCACTGAAAGTACCAAAGGCGAAGGGACACT...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR CAA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCCGAGACTTATCAGCATaGATATTCTATGACACTCAG +
Preference number: 3 (lower is better)
Translates to: LDNKAQIILPATHEISLSRDLSA*IFYDTQ
Trigger: CTGAGTGTCATAGAATATCAATGCTGATAAGTCTCG...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR TCA 72 bp TACATACTAACAAGATGCCCGAGTAAGCATGGAACATaGAGATGGAGAGGTGGTACATACAATATGGTAGGT +
Preference number: 3 (lower is better)
Translates to: YILTRCPSKHGT*RWRGGTYNMVG
Trigger: ACCTACCATATTGTATGTACCACCTCTCCATCTTCATGTTCCATGCTTACTCGGGCATCTTGTTAGTATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR TCA 72 bp CTTGCAGTGGTTGACATGGCAACTGTGAAGGAAGTCTaGTTTAAAAGCTACTTCTATTGTAGTCGTCAACTG +
Preference number: 3 (lower is better)
Translates to: LAVVDMATVKEV*FKSYFYCSRQL
Trigger: CAGTTGACGACTACAATAGAAGTAGCTTTTAAATCAGACTTCCTTCACAGTTGCCATGTCAACCACTGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR GCA 72 bp ATAGTAGTTGGGCTCACATTACCAGGGTGGTACAACTaGCAGGCATCTACTTTTCCACTTTTGATTTCTAAT +
Preference number: 3 (lower is better)
Translates to: IVVGLTLPGWYN*QASTFPLLISN
Trigger: ATTAGAAATCAAAAGTGGAAAAGTAGATGCCTGGCAGTTGTACCACCCTGGTAATGTGAGCCCAACTACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR CAA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGCCACTTGCATATACATaGTCACAGACCACCTTATCT +
Preference number: 3 (lower is better)
Translates to: NNESQVSGWCLFHTLASTPLAYT*SQTTLS
Trigger: AGATAAGGTGGTCTGTGACAATGTATATGCAAGTGG...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR CAA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACTTGTATGAATGCATTTaGGATCTCGAGACTTATCAG +
Preference number: 3 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNLYECI*DLETYQ
Trigger: CTGATAAGTCTCGAGATCCAAAATGCATTCATACAA...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR CAA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGCGAGACTTATCAGCATaGATATTCTATGACACTCAG +
Preference number: 3 (lower is better)
Translates to: NNESQVSGWCLFHTLASTRDLSA*IFYDTQ
Trigger: CTGAGTGTCATAGAATATCAATGCTGATAAGTCTCG...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR GCA 72 bp TCACATAGAGTGAGTCTTACAAAATTATTACTTAGATaGACAGTCCTTGCAGTGGTTGACATGGCAACTGTG +
Preference number: 3 (lower is better)
Translates to: SHRVSLTKLLLR*TVLAVVDMATV
Trigger: CACAGTTGCCATGTCAACCACTGCAAGGACTGTGCATCTAAGTAATAATTTTGTAAGACTCACTCTATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR CCA 72 bp TTTATCATGTGCAGGTTCTTCTTTTATCTTGGAACATaGGACCAAATGGGAAAGGTTTGGCAGTCAAGAACT +
Preference number: 3 (lower is better)
Translates to: FIMCRFFFYLGT*DQMGKVWQSRT
Trigger: AGTTCTTGACTGCCAAACCTTTCCCATTTGGTCCCATGTTCCAAGATAAAAGAAGAACCTGCACATGATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR-3UTR CAA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGTTGTATGAATGCATTTaGGATCTCGAGACTTATCAG +
Preference number: 3 (lower is better)
Translates to: NNESQVSGWCLFHTLASTLYECI*DLETYQ
Trigger: CTGATAAGTCTCGAGATCCAAAATGCATTCATACAA...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR TCA 72 bp TTTCACATACATGAGAATGTAACCAAGCCTTTGGGGTaGATAGGCTATTCTCTCTTCATTAACTGTAGACCT +
Preference number: 3 (lower is better)
Translates to: FHIHENVTKPLG*IGYSLFINCRP
Trigger: AGGTCTACAGTTAATGAAGAGAGAATAGCCTATTCACCCCAAAGGCTTGGTTACATTCTCATGTATGTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR TCA 72 bp CCTCAGGGTTGCAATATCTTAAAAGAAGATTGGATATaGAGATATCACCTGCCCAAGGTCACTAGACATAAA +
Preference number: 3 (lower is better)
Translates to: PQGCNILKEDWI*RYHLPKVTRHK
Trigger: TTTATGTCTAGTGACCTTGGGCAGGTGATATCTTCATATCCAATCTTCTTTTAAGATATTGCAACCCTGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR TCA 72 bp CATAATCCAGTCCTAAGTGTTGTGCAACACCACTCATaGACTACTTCTAGGATGCCTATCAACAACATATAT +
Preference number: 3 (lower is better)
Translates to: HNPVLSVVQHHS*TTSRMPINNIY
Trigger: ATATATGTTGTTGATAGGCATCCTAGAAGTAGTTCATGAGTGGTGTTGCACAACACTTAGGACTGGATTATG
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR GCA 72 bp TTAATAAGAATGTCTGGAAGTGCCACACTTCCATTTTaGAATCTGCATTCCCTTTCTAGTTCAATAGTGGCT +
Preference number: 3 (lower is better)
Translates to: LIRMSGSATLPF*NLHSLSSSIVA
Trigger: AGCCACTATTGAACTAGAAAGGGAATGCAGATTGCAAAATGGAAGTGTGGCACTTCCAGACATTCTTATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR GCA 72 bp TTCCTTTGCTTCTGTGCTAGACAAACTGTCTGGAAATaGAACAGAACTATAAAGCAAATAAAGTCTGACAAC +
Preference number: 3 (lower is better)
Translates to: FLCFCARQTVWK*NRTIKQIKSDN
Trigger: GTTGTCAGACTTTATTTGCTTTATAGTTCTGTTGCATTTCCAGACAGTTTGTCTAGCACAGAAGCAAAGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR CCA 72 bp TGCAACAGAACTATAAAGCAAATAAAGTCTGACAACTaGAATATGTTTCCAAGGGGCATTCCCATTAATATC +
Preference number: 3 (lower is better)
Translates to: CNRTIKQIKSDN*NMFPRGIPINI
Trigger: GATATTAATGGGAATGCCCCTTGGAAACATATTCCAGTTGTCAGACTTTATTTGCTTTATAGTTCTGTTGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR GCA 72 bp AAGTTTGTCTTCAGCCATAATTACACACATACCACTTaGATATACATTGTCACAGACCACCTTATCTTTAAA +
Preference number: 3 (lower is better)
Translates to: KFVFSHNYTHTT*IYIVTDHLIFK
Trigger: TTTAAAGATAAGGTGGTCTGTGACAATGTATATGCAAGTGGTATGTGTGTAATTATGGCTGAAGACAAACTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCCTCCTGCGACCCCTCTaGGGGGCCACTGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELLLRPL*GATAGG
Trigger: CCCACCAGCAGTGGCCCCGCAGAGGGGTCGCAGGAG...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCGGAGGAGGCTGCCCCTaGCCTGGCGGGGCCATTGTG +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELGGGCP*PGGAIV
Trigger: CACAATGGCCCCGCCAGGCCAGGGGCAGCCTCCTCC...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCCCCTCTGGTACCGGCTaGCGTCCTGGCGCACGGAAG +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELPSGTG*RPGARK
Trigger: CTTCCGTGCGCCAGGACGTCAGCCGGTACCAGAGGG...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCCCTCTGCGGGGCCACTaGTGGTGGGCTCAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELPLRGH*WWAQLH
Trigger: GTGCAGCTGAGCCCACCAGCAGTGGCCCCGCAGAGG...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCCTGCGGGGCCACTGCTaGTGGGCTCAGCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELLRGHC*WAQLHR
Trigger: CCTGTGCAGCTGAGCCCACCAGCAGTGGCCCCGCAG...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCCTGGAGCCCGGGCATTaGCACGCTGAGTACCTGGTG +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELLEPGH*HAEYLV
Trigger: CACCAGGTACTCAGCGTGCCAATGCCCGGGCTCCAG...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCAGCAGCTTCAGCCGCTaGCCCTTCCTCTTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELSSFSR*PFLFPA
Trigger: AGCAGGGAAGAGGAAGGGTCAGCGGCTGAAGCTGCT...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCTGGTGGCCATTGGTTTaGGAACCTCCAGTGGCGCCC +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELWWPLV*EPPVAP
Trigger: GGGCGCCACTGGAGGTTCTCAAACCAATGGCCACCA...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCGTGGGCCTACTGCTCTaGAGTGGGAGCCGAGGATCA +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELVGLLL*SGSRGS
Trigger: TGATCCTCGGCTCCCACTTCAGAGCAGTAGGCCCAC...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCCGGGCATTGGCACGCTaGGTACCTGGTGAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELRALAR*VPGEFW
Trigger: CCAGAACTCACCAGGTACTCAGCGTGCCAATGCCCG...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCGGACTCCGAGGATGGTaGCGACAGCCTCTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELGLRGW*RQPLEK
Trigger: CTTCTCCAGAGGCTGTCGGCACCATCCTCGGAGTCC...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACCTCCTGCGACCCCTCTaGGGGGCCACTGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNLLRPL*GATAGG
Trigger: CCCACCAGCAGTGGCCCCGCAGAGGGGTCGCAGGAG...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCACCCTTCCTCTTCCCTaGTGGGCACCTGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELTLPLP*WAPAQQ
Trigger: CTGCTGTGCAGGTGCCCAGCAGGGAAGAGGAAGGGT...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCTCGGGCATTGAGTTCTaGGCTGCCAGGCTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELSGIEF*AARLWR
Trigger: CCTCCAGAGCCTGGCAGCCCAGAACTCAATGCCCGA...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCGGAGGAGGCTGCCCCTaGCCTGGCGGGGCCATTGTG +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSGGGCP*PGGAIV
Trigger: CACAATGGCCCCGCCAGGCCAGGGGCAGCCTCCTCC...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACCGGGGCCACTGCTGGTaGGCTCAGCTGCACAGGCCC +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNRGHCW*AQLHRP
Trigger: GGGCCTGTGCAGCTGAGCCCACCAGCAGTGGCCCCG...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCGTGGCGCCCTCCTCCTaGGCAGTGGCCCCTTCGCAG +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSVAPSS*AVAPSQ
Trigger: CTGCGAAGGGGCCACTGCCCAGGAGGAGGGCGCCAC...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCTTTGAGAACCTCCAGTaGCGCCCTCCTCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELFENLQ*RPPPGQ
Trigger: CTGCCCAGGAGGAGGGCGCCACTGGAGGTTCTCAAA...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCTACCGGCTGACGTCCTaGCGCACGGAAGGTAGTGAC +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELYRLTS*RTEGSD
Trigger: GTCACTACCTTCCGTGCGCCAGGACGTCAGCCGGTA...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACGGGCAGGGGGAGCTGTaGGCCGCTGCCACGTTGTGG +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNGQGEL*AAATLW
Trigger: CCACAACGTGGCAGCGGCCCACAGCTCCCCCTGCCC...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCGGGCAGGGGGAGCTGTaGGCCGCTGCCACGTTGTGG +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSGQGEL*AAATLW
Trigger: CCACAACGTGGCAGCGGCCCACAGCTCCCCCTGCCC...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCTGGCCTGGGAAGAACTaGTGGTCCTGCGTGCCGAGA +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELWPGKN*WSCVPR
Trigger: TCTCGGCACGCAGGACCACCAGTTCTTCCCAGGCCA...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCAGAGTGCAGGCTTCCTaGAGCACCTCCTTCCATGCC +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELRVQAS*STSFHA
Trigger: GGCATGGAAGGAGGTGCTTCAGGAAGCCTGCACTCT...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCCCCTCTGGTACCGGCTaGCGTCCTGGCGCACGGAAG +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSPSGTG*RPGARK
Trigger: CTTCCGTGCGCCAGGACGTCAGCCGGTACCAGAGGG...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCGATCTGGAGGTAGAGTaGGGCAGGACGTTCTCCCGA +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELDLEVE*GRTFSR
Trigger: TCGGGAGAACGTCCTGCCTCACTCTACCTCCAGATC...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCAAGGTCTGCATCGCTTaGGAGCCGCACCAATCCAGG +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELKVCIA*EPHQSR
Trigger: CCTGGATTGGTGCGGCTCTCAAGCGATGCAGACCTT...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCCCTCATCGGAAGGGCTaGCCAGGTCTCCATTCACAG +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELPHRKG*PGLHSQ
Trigger: CTGTGAATGGAGACCTGGGCAGCCCTTCCGATGAGG...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCTCTCACTGGCAGCTCTaGGGCTCCCTCCAGATGTGT +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELSHWQL*GSLQMC
Trigger: ACACATCTGGAGGGAGCCGCAGAGCTGCCAGTGAGA...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACGTGCAGACGGACTCCTaGGACCCCTCTGCGGGGCCA +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNVQTDS*DPSAGP
Trigger: TGGCCCCGCAGAGGGGTCGCAGGAGTCCGTCTGCAC...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCGTGGCTGTCAATCCGTaGCTCCCAGTTTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELVAVNP*LPVWWE
Trigger: CTCCCACCAAACTGGGAGGCACGGATTGACAGCCAC...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCGGAGCTGTGGGCCGCTaGCACGTTGTGGTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELGAVGR*HVVVLF
Trigger: AAACAGAACCACAACGTGGCAGCGGCCCACAGCTCC...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCATGGAGTTAGATCGCTaGAGGACCTGTGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELMELDR*RTCGAG
Trigger: CCCTGCCCCACAGGTCCTGCAGCGATCTAACTCCAT...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCCACTTGTGGGCCTACTaGTCTGAAGTGGGAGCCGAG +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELHLWAY*SEVGAE
Trigger: CTCGGCTCCCACTTCAGAGCAGTAGGCCCACAAGTG...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCGCACTGTGGCTGCGTTaGCTCGTCAGGTGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELALWLR*LVRCCR
Trigger: TCGACAACACCTGACGAGGCAACGCAGCCACAGTGC...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCTGCTGGCAGTCAGGCTaGAGCGGCTCTCAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELCWQSG*SGSQKS
Trigger: TGACTTCTGAGAGCCGCTCCAGCCTGACTGCCAGCA...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCACTCACGTGGTCAGCTaGGAGCCGTCTGCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELTHVVS*EPSAKV
Trigger: AACCTTGGCAGACGGCTCCCAGCTGACCACGTGAGT...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCGGTGCCGACAGCCTCTaGAGAAGCATCTTCGTGAGC +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELGADSL*RSIFVS
Trigger: GCTCACGAAGATGCTTCTCCAGAGGCTGTCGGCACC...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCCTGCGGGGCCACTGCTaGTGGGCTCAGCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSLRGHC*WAQLHR
Trigger: CCTGTGCAGCTGAGCCCACCAGCAGTGGCCCCGCAG...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCGCATCCCCATCTTCCTaGGGCTGGCTATCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELASPSS*GWLSVA
Trigger: TGCCACTGATAGCCAGCCCCAGGAAGATGGGGATGC...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCGCGTCCAGCAAGTACTaGTGTATGAGCGCAAGGCCG +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELASSKY*CMSARP
Trigger: CGGCCTTGCGCTCATACACCAGTACTTGCTGGACGC...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCGCGTGTATTCGTACATaGTGGCAGTCAGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELACIRT*WQSGWS
Trigger: GCTCCAGCCTGACTGCCAGCATGTACGAATACACGC...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp GACACATTCCACTTCTTATCGACAAGACACACCCAGGGACTACCAAGCTTCACTTGGGCTGCCAGGCTCTaGAGGTTCTCTGGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: DTFHFLSTRHTQGLPSFTWAARL*RFSGLS
Trigger: ACTGAGCCCAGAGAACCTCCAGAGCCTGGCAGCCCA...AGTGAAGCTTGGTAGTCCCTGGGTGTGTCTTGTCGATAAGAAGTGGAATGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097741.3
CDS-3UTR CCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCCTTCTCTCCTGCCCATaGTGGGCGCAGGTAGGAAAA +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELLLSCP*WAQVGK
Trigger: TTTTCCTACCTGCGCCCACCATGGGCAGGAGAGAAG...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCGGGACTCGGTCTCACTaGCAGCTCTGCGGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSGTRSH*QLCGSL
Trigger: GAGGGAGCCGCAGAGCTGCCAGTGAGACCGAGTCCC...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCGAAGGTTCAGATCCCTaGTCCAGGGACTCGGTCTCA +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELEGSDP*SRDSVS
Trigger: TGAGACCGAGTCCCTGGACCAGGGATCTGAACCTTC...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCGTCTCAGAGGACACCTaGGAAGGTTCAGATCCCTGG +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELVSEDT*EGSDPW
Trigger: CCAGGGATCTGAACCTTCCCAGGTGTCCTCTGAGAC...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCCCTCAGGTCTGGTACTaGCCTCACTCACACTCTCTG +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELPQVWY*PHSHSL
Trigger: CAGAGAGTGTGAGTGAGGCCAGTACCAGACCTGAGG...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCGACGGAAGTCTGCGCTaGCTTGGTGAAAGTCGGCTT +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELDGSLR*LGESRL
Trigger: AAGCCGACTTTCACCAAGCCAGCGCAGACTTCCGTC...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCCATCTAAGTAATCATTaGGGGAATCCTGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELHLSNH*GNPGGP
Trigger: GGGGCCGCCAGGATTCCCTCAATGATTACTTAGATG...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCCCATCTTCTTCCTCCTaGGAAGAAAAGGCGGGGGTT +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELPSSSS*EEKAGV
Trigger: AACCCCCGCCTTTTCTTCTCAGGAGGAAGAAGATGG...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCGTCAGGTGTTGTCGATaGACCAATGCACTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELVRCCR*TNALVG
Trigger: GCCCACAAGTGCATTGGTTCATCGACAACACCTGAC...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCATGAGGTTCTGGGCTTaGCCCAGCGTGTATTCGTAC +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELMRFWA*PSVYSY
Trigger: GTACGAATACACGCTGGGGCAAGCCCAGAACCTCAT...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp CCACTTCTTATCGACAAGACACACCCAGGGACTACCAAGCTTCACTTCTGTCTCAAGCACCTCCTTCCATaGCTTCGGCCCCCATCATCA +
Preference number: 4 (lower is better)
Translates to: PLLIDKTHPGTTKLHFCLKHLLP*LRPPSS
Trigger: TGATGATGGGGGCCGAAGGCATGGAAGGAGGTGCTT...GAGACAGAAGTGAAGCTTGGTAGTCCCTGGGTGTGTCTTGTCGATAAGAAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000097741.3
CDS-3UTR GCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCATTTGGTCCCCAGCCTaGCGCTCCAGCAGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSIWSPA*RSSSLC
Trigger: GCAGAGGCTGCTGGAGCGGCAGGCTGGGGACCAAAT...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCAGAAGCTCCTGCATCTaGACCACTTGTGGGCTGATC +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELRSSCI*TTCGLI
Trigger: GATCAGCCCACAAGTGGTGCAGATGCAGGAGCTTCT...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGCCTCTGCGGGGCCACTaGTGGTGGGCTCAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTPLRGH*WWAQLH
Trigger: GTGCAGCTGAGCCCACCAGCAGTGGCCCCGCAGAGG...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCGTCATGATGGCTGCCTaGCATATCCTCCTCATCGGA +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELVMMAA*HILLIG
Trigger: TCCGATGAGGAGGATATGCCAGGCAGCCATCATGAC...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACGGGGCTGGCTATCAGTaGCAGCAGCAGCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNGAGYQ*QQQQEQ
Trigger: CTGCTCCTGCTGCTGCTGCCACTGATAGCCAGCCCC...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCCCTTCGCAGGCACCTTaGGCATCCCCAGCATCCCCA +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSPSQAP*ASPASP
Trigger: TGGGGATGCTGGGGATGCCCAAGGTGCCTGCGAAGG...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACACCTCACCCGCACTGTaGCTGCGTTGCCTCGTCAGG +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNTSPAL*LRCLVR
Trigger: CCTGACGAGGCAACGCAGCCACAGTGCGGGTGAGGT...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCATGTACTGGATGGCCTaGGAAGAACTGGTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELMYWMA*EELVVL
Trigger: CAGGACCACCAGTTCTTCCCAGGCCATCCAGTACAT...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp TTCACTTCTGTCTCCTCAAAAACTAATCTCAGAAGAGAGGCAAGTGAGGGGCAGAGAGTGCAGGCTTCCTaGAGCACCTCCTTCCATGCC +
Preference number: 4 (lower is better)
Translates to: FTSVSSKTNLRREASEGQRVQAS*STSFHA
Trigger: GGCATGGAAGGAGGTGCTTCAGGAAGCCTGCACTCT...CTGCCCCTCACTTGCCTCTCTTCTGAGATTAGTTTTTGAGGAGACAGAAGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000097741.3
CDS-3UTR TCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACACGCCCTGCTGCACATaGTCAAGCCTCCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNTPCCT*SSLPPP
Trigger: AGGAGGAGGGAGGCTTGATCATGTGCAGCAGGGCGT...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCACGCCCTGCTGCACATaGTCAAGCCTCCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSTPCCT*SSLPPP
Trigger: AGGAGGAGGGAGGCTTGATCATGTGCAGCAGGGCGT...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACCACGCTCTCATTGCATaGGCTGTCTGCGCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNHALIA*AVCAFR
Trigger: CCGGAAGGCGCAGACAGCTCATGCAATGAGAGCGTG...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCTCTGCGCTGGCTTGGTaGAAGTCGGCTTCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSSALAW*KSASSP
Trigger: AGGGGAGGAAGCCGACTTTCACCAAGCCAGCGCAGA...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACTCTGCGCTGGCTTGGTaGAAGTCGGCTTCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNSALAW*KSASSP
Trigger: AGGGGAGGAAGCCGACTTTCACCAAGCCAGCGCAGA...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCCGGGCATTGGCACGCTaGGTACCTGGTGAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSRALAR*VPGEFW
Trigger: CCAGAACTCACCAGGTACTCAGCGTGCCAATGCCCG...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACGGACTCCGAGGATGGTaGCGACAGCCTCTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNGLRGW*RQPLEK
Trigger: CTTCTCCAGAGGCTGTCGGCACCATCCTCGGAGTCC...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACACCCTTCCTCTTCCCTaGTGGGCACCTGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNTLPLP*WAPAQQ
Trigger: CTGCTGTGCAGGTGCCCAGCAGGGAAGAGGAAGGGT...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACAGACTCCCCCTCCTCTaGCAGACTTCCCCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNRLPLL*QTSPSS
Trigger: GGAGCTAGGGGAAGTCTGGCAGAGGAGGGGGAGTCT...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCGTCGGCTTCCTCCCCTaGCCCATCGATAGCACTGGT +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSVGFLP*PIDSTG
Trigger: ACCAGTGCTATCGATGGGGCAGGGGAGGAAGCCGAC...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCCACCCGCACTGTGGCTaGGTTGCCTCGTCAGGTGTT +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSHPHCG*VASSGV
Trigger: AACACCTGACGAGGCAACGCAGCCACAGTGCGGGTG...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACCACCCGCACTGTGGCTaGGTTGCCTCGTCAGGTGTT +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNHPHCG*VASSGV
Trigger: AACACCTGACGAGGCAACGCAGCCACAGTGCGGGTG...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp GACACATTCCACTTCTTATCGACAAGACACACCCAGGGACTACCAAGCTTCACTGCTCTGGAGGTTCTCTaGGCTCAGTGTGTACCGCAT +
Preference number: 4 (lower is better)
Translates to: DTFHFLSTRHTQGLPSFTALEVL*AQCVPH
Trigger: ATGCGGTACACACTGAGCCCAGAGAACCTCCAGAGC...AGTGAAGCTTGGTAGTCCCTGGGTGTGTCTTGTCGATAAGAAGTGGAATGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097741.3
CDS-3UTR CCA 90 bp TTAAAGAGACACATTCCACTTCTTATCGACAAGACACACCCAGGGACTACCAAGTCGGGCATTGAGTTCTaGGCTGCCAGGCTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LKRHIPLLIDKTHPGTTKSGIEF*AARLWR
Trigger: CCTCCAGAGCCTGGCAGCCCAGAACTCAATGCCCGA...CTTGGTAGTCCCTGGGTGTGTCTTGTCGATAAGAAGTGGAATGTGTCTCTTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097741.3
CDS-3UTR CCA 90 bp TTATCGACAAGACACACCCAGGGACTACCAAGCTTCACTTCTGTCTCCTCAAAATGCTGGCAGTCAGGCTaGAGCGGCTCTCAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: LSTRHTQGLPSFTSVSSKCWQSG*SGSQKS
Trigger: TGACTTCTGAGAGCCGCTCCAGCCTGACTGCCAGCA...TTTTGAGGAGACAGAAGTGAAGCTTGGTAGTCCCTGGGTGTGTCTTGTCGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097741.3
CDS-3UTR CCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCAGGTACCCACTCACGTaGTCAGCTGGGAGCCGTCTG +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSRYPLT*SAGSRL
Trigger: CAGACGGCTCCCAGCTGACCACGTGAGTGGGTACCT...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCACTGTCCTCGGACACTaGCCCATTAGCACAGATAGT +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELTVLGH*PISTDS
Trigger: ACTATCTGTGCTAATGGGCCAGTGTCCGAGGACAGT...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCGTTGAGGCTCCAGGTTaGCTTCATTTTCATCAGGGG +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELVEAPG*LHFHQG
Trigger: CCCCTGATGAAAATGAAGCCAACCTGGAGCCTCAAC...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGGGGACTCGGTCTCACTaGCAGCTCTGCGGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTGTRSH*QLCGSL
Trigger: GAGGGAGCCGCAGAGCTGCCAGTGAGACCGAGTCCC...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACTTTGAGAACCTCCAGTaGCGCCCTCCTCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNFENLQ*RPPPGQ
Trigger: CTGCCCAGGAGGAGGGCGCCACTGGAGGTTCTCAAA...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCCCTACTGCTCTGAAGTaGGAGCCGAGGATCAATGAA +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELPTALK*EPRINE
Trigger: TTCATTGATCCTCGGCTCCCACTTCAGAGCAGTAGG...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCCCTGGGAAGAACTGGTaGTCCTGCGTGCCGAGAGTC +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSPGKNW*SCVPRV
Trigger: GACTCTCGGCACGCAGGACCACCAGTTCTTCCCAGG...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACCCTGGGAAGAACTGGTaGTCCTGCGTGCCGAGAGTC +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNPGKNW*SCVPRV
Trigger: GACTCTCGGCACGCAGGACCACCAGTTCTTCCCAGG...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACTCTCTTGTAAGGGGCTaGAGCCCGGGCATTGGCACG +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNSLVRG*SPGIGT
Trigger: CGTGCCAATGCCCGGGCTCCAGCCCCTTACAAGAGA...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCTCTCTTGTAAGGGGCTaGAGCCCGGGCATTGGCACG +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSSLVRG*SPGIGT
Trigger: CGTGCCAATGCCCGGGCTCCAGCCCCTTACAAGAGA...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCGTTCTTCTCTGTGACTaGAATATTGGCTCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELVLLCD*NIGSPW
Trigger: CCAGGGGGAGCCAATATTCCAGTCACAGAGAAGAAC...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR CAA 72 bp TCAGCGCTGAGCACACAGTCCTCACAGTCCCTACCTTaGCATGCCATTGCCATCGAGGTAGTGTTGAATAGA +
Preference number: 4 (lower is better)
Translates to: SALSTQSSQSLP*HAIAIEVVLNR
Trigger: TCTATTCAACACTACCTCGATGGCAATGGCATGCAAAGGTAGGGACTGTGAGGACTGTGTGCTCAGCGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACTGGTCTGCACTGGGTTaGGGCTCCAGGTTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNWSALG*GSRLAS
Trigger: TGAAGCCAACCTGGAGCCTCAACCCAGTGCAGACCA...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCGATCTGGAGGTAGAGTaGGGCAGGACGTTCTCCCGA +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSDLEVE*GRTFSR
Trigger: TCGGGAGAACGTCCTGCCTCACTCTACCTCCAGATC...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCAAGGTCTGCATCGCTTaGGAGCCGCACCAATCCAGG +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSKVCIA*EPHQSR
Trigger: CCTGGATTGGTGCGGCTCTCAAGCGATGCAGACCTT...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACGCAAGTACTGGTGTATaGGCGCAAGGCCGAGGATCC +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNASTGV*AQGRGS
Trigger: GGATCCTCGGCCTTGCGCTCATACACCAGTACTTGC...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCGCAAGTACTGGTGTATaGGCGCAAGGCCGAGGATCC +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSASTGV*AQGRGS
Trigger: GGATCCTCGGCCTTGCGCTCATACACCAGTACTTGC...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCCACCGAATTACAATGTaGTTGTCATGGTACCCGCCT +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELHRITM*LSWYPP
Trigger: AGGCGGGTACCATGACAATCACATTGTAATTCGGTG...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCGAGTATTTCTCTCTGTaGCAGATCGGATTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELEYFSL*QIGLVV
Trigger: CACCACCAATCCGATCTGGCACAGAGAGAAATACTC...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGATTTGGTCCCCAGCCTaGCGCTCCAGCAGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTIWSPA*RSSSLC
Trigger: GCAGAGGCTGCTGGAGCGGCAGGCTGGGGACCAAAT...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCTACTGTCATGATGGCTaGCTGGCATATCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELYCHDG*LAYPPH
Trigger: ATGAGGAGGATATGCCAGGCAGCCATCATGACAGTA...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCCTAGTCCTGAAAGAATaGTTAGGGGTGCCATCAGCA +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELLVLKE*LGVPSA
Trigger: TGCTGATGGCACCCCTAAGCATTCTTTCAGGACTAG...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCAGTGCTACCCTGGTCTaGACTGGGTTGAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSSATLV*TGLRLQ
Trigger: CTGGAGCCTCAACCCAGTGCAGACCAGGGTAGCACT...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCGGAGCTGTGGGCCGCTaGCACGTTGTGGTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSGAVGR*HVVVLF
Trigger: AAACAGAACCACAACGTGGCAGCGGCCCACAGCTCC...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACATGGAGTTAGATCGCTaGAGGACCTGTGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNMELDR*RTCGAG
Trigger: CCCTGCCCCACAGGTCCTGCAGCGATCTAACTCCAT...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACCACTTGTGGGCCTACTaGTCTGAAGTGGGAGCCGAG +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNHLWAY*SEVGAE
Trigger: CTCGGCTCCCACTTCAGAGCAGTAGGCCCACAAGTG...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCGCACTGTGGCTGCGTTaGCTCGTCAGGTGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSALWLR*LVRCCR
Trigger: TCGACAACACCTGACGAGGCAACGCAGCCACAGTGC...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACACTGGTGGTCCTGCGTaGCGAGAGTCTTCTCCTACC +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNTGGPA*RESSPT
Trigger: GGTAGGAGAAGACTCTCGGCACGCAGGACCACCAGT...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCACTAGGCTCTCTGTCTaGTGCACCACACCCCTCTCG +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSTRLSV*CTTPLS
Trigger: CGAGAGGGGTGTGGTGCAGCAGACAGAGAGCCTAGT...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACACTAGGCTCTCTGTCTaGTGCACCACACCCCTCTCG +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNTRLSV*CTTPLS
Trigger: CGAGAGGGGTGTGGTGCAGCAGACAGAGAGCCTAGT...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp TATCGACAAGACACACCCAGGGACTACCAAGCTTCACTTCTGTCTCCTCAAAAATGTATTCGTACATGCTaGCAGTCAGGCTGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: YRQDTPRDYQASLLSPQKCIRTC*QSGWSG
Trigger: GCCGCTCCAGCCTGACTGCCAGCATGTACGAATACA...TTTTTGAGGAGACAGAAGTGAAGCTTGGTAGTCCCTGGGTGTGTCTTGTCGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000097741.3
CDS-3UTR CCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCAAGATAATGAGGTTCTaGGCTTGCCCCAGCGTGTAT +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELKIMRF*ACPSVY
Trigger: ATACACGCTGGGGCAAGCCCAGAACCTCATTATCTT...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp TTATCGACAAGACACACCCAGGGACTACCAAGCTTCACTTCTGTCTCCTCAAAACTTCTCTCCTGCCCATaGTGGGCGCAGGTAGGAAAA +
Preference number: 4 (lower is better)
Translates to: LSTRHTQGLPSFTSVSSKLLSCP*WAQVGK
Trigger: TTTTCCTACCTGCGCCCACCATGGGCAGGAGAGAAG...TTTTGAGGAGACAGAAGTGAAGCTTGGTAGTCCCTGGGTGTGTCTTGTCGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097741.3
CDS-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGAGGCTGCCCCTGGCCTaGCGGGGCCATTGTGTTCAA +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTRLPLA*RGHCVQ
Trigger: TTGAACACAATGGCCCCGCCAGGCCAGGGGCAGCCT...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCAGGGTTGTCATCCTCTaGTTTGGTCTGAGATGTCAG +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELRVVIL*FGLRCQ
Trigger: CTGACATCTCAGACCAAACCAGAGGATGACAACCCT...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACTACCCTGGTCTGCACTaGGTTGAGGCTCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNYPGLH*VEAPGW
Trigger: CCAACCTGGAGCCTCAACCCAGTGCAGACCAGGGTA...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACCCATCTTCCTGGGGCTaGCTATCAGTGGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNPSSWG*LSVAAA
Trigger: TGCTGCTGCCACTGATAGCCAGCCCCAGGAAGATGG...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCCCATCTTCCTGGGGCTaGCTATCAGTGGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSPSSWG*LSVAAA
Trigger: TGCTGCTGCCACTGATAGCCAGCCCCAGGAAGATGG...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACGCATCCCCATCTTCCTaGGGCTGGCTATCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNASPSS*GWLSVA
Trigger: TGCCACTGATAGCCAGCCCCAGGAAGATGGGGATGC...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGCCTTCGCAGGCACCTTaGGCATCCCCAGCATCCCCA +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTPSQAP*ASPASP
Trigger: TGGGGATGCTGGGGATGCCCAAGGTGCCTGCGAAGG...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCATTGAATGTACTGGATaGCCTGGGAAGAACTGGTGG +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELIECTG*PGKNWW
Trigger: CCACCAGTTCTTCCCAGGCCATCCAGTACATTCAAT...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR CAA 72 bp GGGACCAAATGGGAAAGGTTTGGCAGTCAAGAACTGTaGACTGAAAGACTGTTGGGTTGTTCCATGGGCACC +
Preference number: 4 (lower is better)
Translates to: GTKWERFGSQEL*TERLLGCSMGT
Trigger: GGTGCCCATGGAACAACCCAACAGTCTTTCAGTCAACAGTTCTTGACTGCCAAACCTTTCCCATTTGGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACTGCCAAGGTTGTAGCTaGGCATTTGGTCCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNCQGCS*AFGPQP
Trigger: AGGCTGGGGACCAAATGCTCAGCTACAACCTTGGCA...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCTGCCAAGGTTGTAGCTaGGCATTTGGTCCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSCQGCS*AFGPQP
Trigger: AGGCTGGGGACCAAATGCTCAGCTACAACCTTGGCA...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGTGGTGGCCATTGGTTTaGGAACCTCCAGTGGCGCCC +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTWWPLV*EPPVAP
Trigger: GGGCGCCACTGGAGGTTCTCAAACCAATGGCCACCA...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCCCCGCCGGACTTTGGTaGTCATGTGCTTCAAACACG +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSPAGLW*SCASNT
Trigger: CGTGTTTGAAGCACATGATCACCAAAGTCCGGCGGG...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACCCCGCCGGACTTTGGTaGTCATGTGCTTCAAACACG +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNPAGLW*SCASNT
Trigger: CGTGTTTGAAGCACATGATCACCAAAGTCCGGCGGG...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGGTGGGCCTACTGCTCTaGAGTGGGAGCCGAGGATCA +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTVGLLL*SGSRGS
Trigger: TGATCCTCGGCTCCCACTTCAGAGCAGTAGGCCCAC...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCATAAGCTCAGTAACATaGCAAGGTCTGCATCGCTTG +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELISSVT*QGLHRL
Trigger: CAAGCGATGCAGACCTTGTCATGTTACTGAGCTTAT...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCTGTTTCTCCAGTCATTaGGATCTATCTCAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELCFSSH*DLSQLC
Trigger: GCACAGCTGAGATAGATCTCAATGACTGGAGAAACA...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp TATCGACAAGACACACCCAGGGACTACCAAGCTTCACTTCTGTCTCCTCAAAAAATGAGGTTCTGGGCTTaGCCCAGCGTGTATTCGTAC +
Preference number: 4 (lower is better)
Translates to: YRQDTPRDYQASLLSPQKMRFWA*PSVYSY
Trigger: GTACGAATACACGCTGGGGCAAGCCCAGAACCTCAT...TTTTTGAGGAGACAGAAGTGAAGCTTGGTAGTCCCTGGGTGTGTCTTGTCGATA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000097741.3
CDS-3UTR GCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACAAGCACCTCCTTCCATaGCTTCGGCCCCCATCATCA +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNKHLLP*LRPPSS
Trigger: TGATGATGGGGGCCGAAGGCATGGAAGGAGGTGCTT...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGGCTGGTGGGCTCAGCTaGACAGGCCCCATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTAGGLS*TGPIFF
Trigger: GAAGAAGATGGGGCCTGTGCAGCTGAGCCCACCAGC...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGAGACTCCCCCTCCTCTaGCAGACTTCCCCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTRLPLL*QTSPSS
Trigger: GGAGCTAGGGGAAGTCTGGCAGAGGAGGGGGAGTCT...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCTTCAGCTGCTCCATTTaGTGTATGGAGTTAGATCGC +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELFSCSI*CMELDR
Trigger: GCGATCTAACTCCATACAGCAAATGGAGCAGCTGAA...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGGTCGGCTTCCTCCCCTaGCCCATCGATAGCACTGGT +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTVGFLP*PIDSTG
Trigger: ACCAGTGCTATCGATGGGGCAGGGGAGGAAGCCGAC...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACAAGAACTGGTGGTCCTaGGTGCCGAGAGTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNKNWWS*VPRVFS
Trigger: GGAGAAGACTCTCGGCACGCAGGACCACCAGTTCTT...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp GAGACACATTCCACTTCTTATCGACAAGACACACCCAGGGACTACCAAGCTTCATGTGTACCGCATCTGTaGATTTCGACGCCGCACAAA +
Preference number: 4 (lower is better)
Translates to: ETHSTSYRQDTPRDYQASCVPHL*ISTPHK
Trigger: TTTGTGCGGCGTCGAAATCCACAGATGCGGTACACA...TGAAGCTTGGTAGTCCCTGGGTGTGTCTTGTCGATAAGAAGTGGAATGTGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097741.3
CDS-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGTGGGCTGCCAGGCTCTaGAGGTTCTCTGGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTWAARL*RFSGLS
Trigger: ACTGAGCCCAGAGAACCTCCAGAGCCTGGCAGCCCA...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACTGTATTCGTACATGCTaGCAGTCAGGCTGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNCIRTC*QSGWSG
Trigger: GCCGCTCCAGCCTGACTGCCAGCATGTACGAATACA...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCACTGCTCTTCTTCCCTaGCTGAATGGACATCTTAAG +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELTALLP*LNGHLK
Trigger: CTTAAGATGTCCATTCAGCCAGGGAAGAAGAGCAGT...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACCTTCTCTCCTGCCCATaGTGGGCGCAGGTAGGAAAA +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNLLSCP*WAQVGK
Trigger: TTTTCCTACCTGCGCCCACCATGGGCAGGAGAGAAG...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGAGGTACCCACTCACGTaGTCAGCTGGGAGCCGTCTG +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTRYPLT*SAGSRL
Trigger: CAGACGGCTCCCAGCTGACCACGTGAGTGGGTACCT...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCTCTCCATTCACAGTGTaGACTCCGAGGATGGTGCCG +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSSPFTV*TPRMVP
Trigger: CGGCACCATCCTCGGAGTCCACACTGTGAATGGAGA...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCGTCTCAGAGGACACCTaGGAAGGTTCAGATCCCTGG +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSVSEDT*EGSDPW
Trigger: CCAGGGATCTGAACCTTCCCAGGTGTCCTCTGAGAC...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACAGGGCTGGTGGCCATTaGTTTGAGAACCTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNRAGGH*FENLQW
Trigger: CCACTGGAGGTTCTCAAACCAATGGCCACCAGCCCT...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGTGGCCTGGGAAGAACTaGTGGTCCTGCGTGCCGAGA +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTWPGKN*WSCVPR
Trigger: TCTCGGCACGCAGGACCACCAGTTCTTCCCAGGCCA...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCACTGGAACCATGTCCTaGTACTGCGGCCTACTGACC +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSTGTMS*YCGLLT
Trigger: GGTCAGTAGGCCGCAGTACCAGGACATGGTTCCAGT...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACGGGACTGACAGTAGCTaGGGTGGAGTAAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNGTDSS*GGVRHE
Trigger: CTCATGCCTTACTCCACCCCAGCTACTGTCAGTCCC...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGAGAGTGCAGGCTTCCTaGAGCACCTCCTTCCATGCC +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTRVQAS*STSFHA
Trigger: GGCATGGAAGGAGGTGCTTCAGGAAGCCTGCACTCT...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACCATCTAAGTAATCATTaGGGGAATCCTGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNHLSNH*GNPGGP
Trigger: GGGGCCGCCAGGATTCCCTCAATGATTACTTAGATG...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCTCGTCTGAGTCAATATaGAGCATCGCATTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELSSESI*SIALSL
Trigger: AAGACTCAATGCGATGCTTCATATTGACTCAGACGA...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGTGGTCTGCACTGGGTTaGGGCTCCAGGTTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTWSALG*GSRLAS
Trigger: TGAAGCCAACCTGGAGCCTCAACCCAGTGCAGACCA...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCCCATCTTCTTCCTCCTaGGAAGAAAAGGCGGGGGTT +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSPSSSS*EEKAGV
Trigger: AACCCCCGCCTTTTCTTCTCAGGAGGAAGAAGATGG...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCGTCAGGTGTTGTCGATaGACCAATGCACTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSVRCCR*TNALVG
Trigger: GCCCACAAGTGCATTGGTTCATCGACAACACCTGAC...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACTATAGAAGGGTCGCGTaGAGAAGGCGTCCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNYRRVA*RRRPAS
Trigger: ACTTGCTGGACGCCTTCTTCACGCGACCCTTCTATA...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACATGAGGTTCTGGGCTTaGCCCAGCGTGTATTCGTAC +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNMRFWA*PSVYSY
Trigger: GTACGAATACACGCTGGGGCAAGCCCAGAACCTCAT...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGCCTCATCGGAAGGGCTaGCCAGGTCTCCATTCACAG +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTPHRKG*PGLHSQ
Trigger: CTGTGAATGGAGACCTGGGCAGCCCTTCCGATGAGG...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGAGTGCTACCCTGGTCTaGACTGGGTTGAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTSATLV*TGLRLQ
Trigger: CTGGAGCCTCAACCCAGTGCAGACCAGGGTAGCACT...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCAGAAGCTCCTGCATCTaGACCACTTGTGGGCTGATC +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSRSSCI*TTCGLI
Trigger: GATCAGCCCACAAGTGGTGCAGATGCAGGAGCTTCT...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACTCCCTGCTGGGCACCTaGACAGCAGGTAAAGAACTA +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNSLLGT*TAGKEL
Trigger: TAGTTCTTTACCTGCTGTGCAGGTGCCCAGCAGGGA...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGTGCTGGCAGTCAGGCTaGAGCGGCTCTCAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTCWQSG*SGSQKS
Trigger: TGACTTCTGAGAGCCGCTCCAGCCTGACTGCCAGCA...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CACTTCTTATCGACAAGACACACCCAGGGACTACCAAGCTTCACTTCTGTCTCCACTGCTCTTCTTCCCTaGCTGAATGGACATCTTAAG +
Preference number: 4 (lower is better)
Translates to: HFLSTRHTQGLPSFTSVSTALLP*LNGHLK
Trigger: CTTAAGATGTCCATTCAGCCAGGGAAGAAGAGCAGT...GGAGACAGAAGTGAAGCTTGGTAGTCCCTGGGTGTGTCTTGTCGATAAGAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097741.3
CDS-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGACTCACGTGGTCAGCTaGGAGCCGTCTGCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTTHVVS*EPSAKV
Trigger: AACCTTGGCAGACGGCTCCCAGCTGACCACGTGAGT...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACGCCATCTGCAACCTCTaGAAGATTCTCCAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNAICNL*KILQPL
Trigger: GAGAGGCTGGAGAATCTTCCAGAGGTTGCAGATGGC...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGTACCCTGGTCTGCACTaGGTTGAGGCTCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTYPGLH*VEAPGW
Trigger: CCAACCTGGAGCCTCAACCCAGTGCAGACCAGGGTA...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGTGCCTCCCAGTTTGGTaGGAGAGCCTCATCCACCCT +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTCLPVW*ESLIHP
Trigger: AGGGTGGATGAGGCTCTCCCACCAAACTGGGAGGCA...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCAGGTCCAGGATGTCATaGATGTCATTGTCTTTCATC +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELRSRMS*MSLSFI
Trigger: GATGAAAGACAATGACATCCATGACATCCTGGACCT...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCGGAAAAGGAAGGGTATaGAGGCAGATCCAGGCGGTT +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSGKGRV*RQIQAV
Trigger: AACCGCCTGGATCTGCCTCCATACCCTTCCTTTTCC...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACGGGTGGAGTAAGGCATaGGGAGGCACATATGACATT +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNGWSKA*GGTYDI
Trigger: AATGTCATATGTGCCTCCTCATGCCTTACTCCACCC...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACCCTCCCCGACAAAGGTaGCGTACAGTTTATTCCTCT +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNPPRQR*RTVYSS
Trigger: AGAGGAATAAACTGTACGTCACCTTTGTCGGGGAGG...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp ATAAGGGCACTTATTAAAGAGACACATTCCACTTCTTATCGACAAGACACACCCGCGTGTATTCGTACATaGTGGCAGTCAGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: IRALIKETHSTSYRQDTPACIRT*WQSGWS
Trigger: GCTCCAGCCTGACTGCCAGCATGTACGAATACACGC...GGGTGTGTCTTGTCGATAAGAAGTGGAATGTGTCTCTTTAATAAGTGCCCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097741.3
CDS-3UTR GCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCACGAGTTTCCTAGAGTaGAGGCTTCCTGAAGCACCT +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSTSFLE*RLPEAP
Trigger: AGGTGCTTCAGGAAGCCTGCACTCTAGGAAACTCGT...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp TATCGACAAGACACACCCAGGGACTACCAAGCTTCACTTCTGTCTCCTCAAAAAGAGTATTTCTCTCTGTaGCAGATCGGATTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: YRQDTPRDYQASLLSPQKEYFSL*QIGLVV
Trigger: CACCACCAATCCGATCTGGCACAGAGAGAAATACTC...TTTTTGAGGAGACAGAAGTGAAGCTTGGTAGTCCCTGGGTGTGTCTTGTCGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000097741.3
CDS-3UTR GCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGAAGAACTGGTGGTCCTaGGTGCCGAGAGTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTKNWWS*VPRVFS
Trigger: GGAGAAGACTCTCGGCACGCAGGACCACCAGTTCTT...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACTGTGTACCGCATCTGTaGATTTCGACGCCGCACAAA +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNCVPHL*ISTPHK
Trigger: TTTGTGCGGCGTCGAAATCCACAGATGCGGTACACA...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGGCTCTGGAGGTTCTCTaGGCTCAGTGTGTACCGCAT +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTALEVL*AQCVPH
Trigger: ATGCGGTACACACTGAGCCCAGAGAACCTCCAGAGC...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CACATTCCACTTCTTATCGACAAGACACACCCAGGGACTACCAAGCTTCACTTCGTCCCAGAAGTTGGCTaGAGAATTCTCATCTATGTG +
Preference number: 4 (lower is better)
Translates to: HIPLLIDKTHPGTTKLHFVPEVG*RILIYV
Trigger: CACATAGATGAGAATTCTCCAGCCAACTTCTGGGAC...GAAGTGAAGCTTGGTAGTCCCTGGGTGTGTCTTGTCGATAAGAAGTGGAATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097741.3
CDS-3UTR CCA 90 bp TCACTTCTGTCTCCTCAAAAACTAATCTCAGAAGAGAGGCAAGTGAGGGGCAGTCCCCATCATCACAGCTaGGTTCTTCACGGTAATACA +
Preference number: 4 (lower is better)
Translates to: SLLSPQKLISEERQVRGSPHHHS*VLHGNT
Trigger: TGTATTACCGTGAAGAACCCAGCTGTGATGATGGGG...ACTGCCCCTCACTTGCCTCTCTTCTGAGATTAGTTTTTGAGGAGACAGAAGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000097741.3
CDS-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGTCTCCATTCACAGTGTaGACTCCGAGGATGGTGCCG +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTSPFTV*TPRMVP
Trigger: CGGCACCATCCTCGGAGTCCACACTGTGAATGGAGA...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACCTCCTCCAAAGAAGATaGGTAGCCCAAGTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNLLQRR*VAQVLL
Trigger: CAGCAAGACTTGGGCTACCCATCTTCTTTGGAGGAG...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCTGTCATCCTCTGGTTTaGTCTGAGATGTCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSCHPLV*SEMSGS
Trigger: GGAGCCTGACATCTCAGACCAAACCAGAGGATGACA...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCGTTGAGGCTCCAGGTTaGCTTCATTTTCATCAGGGG +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSVEAPG*LHFHQG
Trigger: CCCCTGATGAAAATGAAGCCAACCTGGAGCCTCAAC...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGCCTCAGGTCTGGTACTaGCCTCACTCACACTCTCTG +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTPQVWY*PHSHSL
Trigger: CAGAGAGTGTGAGTGAGGCCAGTACCAGACCTGAGG...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGAGGGCTGGTGGCCATTaGTTTGAGAACCTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTRAGGH*FENLQW
Trigger: CCACTGGAGGTTCTCAAACCAATGGCCACCAGCCCT...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGGACGGAAGTCTGCGCTaGCTTGGTGAAAGTCGGCTT +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTDGSLR*LGESRL
Trigger: AAGCCGACTTTCACCAAGCCAGCGCAGACTTCCGTC...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACCACGGTGAAGAACTCTaGGCTGATGAGGAACTTCAC +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNHGEEL*ADEELH
Trigger: GTGAAGTTCCTCATCAGCCCAGAGTTCTTCACCGTG...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCGAACCAATGCACTTGTaGGCCTACTGCTCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSEPMHL*AYCSEV
Trigger: CACTTCAGAGCAGTAGGCCCACAAGTGCATTGGTTC...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACGAACCAATGCACTTGTaGGCCTACTGCTCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNEPMHL*AYCSEV
Trigger: CACTTCAGAGCAGTAGGCCCACAAGTGCATTGGTTC...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGACTGGAACCATGTCCTaGTACTGCGGCCTACTGACC +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTTGTMS*YCGLLT
Trigger: GGTCAGTAGGCCGCAGTACCAGGACATGGTTCCAGT...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACGTCATTGTAGGCCACTaGAACCATGTCCTGGTACTG +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNVIVGH*NHVLVL
Trigger: CAGTACCAGGACATGGTTCCAGTGGCCTACAATGAC...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACGAAGAACTCTCTGGATaGCCCACTGTAATCCAACCC +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNEELSG*PTVIQP
Trigger: GGGTTGGATTACAGTGGGCCATCCAGAGAGTTCTTC...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCATTGGATCTTCTCCCTaGGTGAGTGGTTTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSIGSSP*VSGFWQ
Trigger: TTGCCAGAAACCACTCACTCAGGGAGAAGATCCAAT...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGTATAGAAGGGTCGCGTaGAGAAGGCGTCCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTYRRVA*RRRPAS
Trigger: ACTTGCTGGACGCCTTCTTCACGCGACCCTTCTATA...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACGGTCACACAGGATTCTaGGAAGAGCCTTATAGAAGG +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNGHTGF*EEPYRR
Trigger: CCTTCTATAAGGCTCTTCTCAGAATCCTGTGTGACC...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCGGTCACACAGGATTCTaGGAAGAGCCTTATAGAAGG +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSGHTGF*EEPYRR
Trigger: CCTTCTATAAGGCTCTTCTCAGAATCCTGTGTGACC...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACCACCGAATTACAATGTaGTTGTCATGGTACCCGCCT +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNHRITM*LSWYPP
Trigger: AGGCGGGTACCATGACAATCACATTGTAATTCGGTG...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGTCCCTGCTGGGCACCTaGACAGCAGGTAAAGAACTA +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTSLLGT*TAGKEL
Trigger: TAGTTCTTTACCTGCTGTGCAGGTGCCCAGCAGGGA...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCTCATGGTTCTGCGGATaGTCTGATAACGTCGGTTCA +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSSWFCG*SDNVGS
Trigger: TGAACCGACGTTATCAGAGCATCCGCAGAACCATGA...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACGCACTAGGGTTAGAATaGAGCACGGTGAAGAACTCT +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNALGLE*STVKNS
Trigger: AGAGTTCTTCACCGTGCTGCATTCTAACCCTAGTGC...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGACCATGTCCTGGTACTaGGGCCTACTGACCGTATTG +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTTMSWY*GLLTVL
Trigger: CAATACGGTCAGTAGGCCGCAGTACCAGGACATGGT...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCTCTCGTTCAGTAATCTaGCCAAAAACTTCTTCATTC +
Preference number: 4 (lower is better)
Translates to: LLGCSMGTKLTPILPKELSRSVI*PKTSSF
Trigger: GAATGAAGAAGTTTTTGGGCAGATTACTGAACGAGA...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACGTTGAATCTTTCCACTaGAGCCCAGAACCACCGAAT +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNVESFH*SPEPPN
Trigger: ATTCGGTGGTTCTGGGCTGCAGTGGAAAGATTCAAC...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCGTTGAATCTTTCCACTaGAGCCCAGAACCACCGAAT +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSVESFH*SPEPPN
Trigger: ATTCGGTGGTTCTGGGCTGCAGTGGAAAGATTCAAC...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACCCCCATCATCACAGCTaGGTTCTTCACGGTAATACA +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNPHHHS*VLHGNT
Trigger: TGTATTACCGTGAAGAACCCAGCTGTGATGATGGGG...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGGTCATGATGGCTGCCTaGCATATCCTCCTCATCGGA +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTVMMAA*HILLIG
Trigger: TCCGATGAGGAGGATATGCCAGGCAGCCATCATGAC...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCAGGGTTGTCATCCTCTaGTTTGGTCTGAGATGTCAG +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSRVVIL*FGLRCQ
Trigger: CTGACATCTCAGACCAAACCAGAGGATGACAACCCT...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCCATCTGCACCACTTGTaGGCTGATCTACTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSHLHHL*ADLLLE
Trigger: CTCAAGAAGTAGATCAGCCCACAAGTGGTGCAGATG...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACCACACAGAATCTTCTTaGACCATTACTCCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNHTESS*TITPSE
Trigger: CTCCGAGGGAGTAATGGTCCAAGAAGATTCTGTGTG...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCCACACAGAATCTTCTTaGACCATTACTCCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSHTESS*TITPSE
Trigger: CTCCGAGGGAGTAATGGTCCAAGAAGATTCTGTGTG...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGGGAAAAGGAAGGGTATaGAGGCAGATCCAGGCGGTT +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTGKGRV*RQIQAV
Trigger: AACCGCCTGGATCTGCCTCCATACCCTTCCTTTTCC...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR CAA 72 bp AAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTaGCTTCTACGTAATCCCCAAGAGGGCCAAATTCCT +
Preference number: 4 (lower is better)
Translates to: KARSLVGVFFIL*LLRNPQEGQIP
Trigger: AGGAATTTGGCCCTCTTGGGGATTACGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACTATGAAGCATCGCATTaGGTCTTGTGTCAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNYEASH*VLCQWE
Trigger: TTCCCACTGACACAAGACTCAATGCGATGCTTCATA...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCATGGTCTTCTTCGTCTaGGTCAATATGAAGCATCGC +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSMVFFV*VNMKHR
Trigger: GCGATGCTTCATATTGACTCAGACGAAGAAGACCAT...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGGGGTGGAGTAAGGCATaGGGAGGCACATATGACATT +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTGWSKA*GGTYDI
Trigger: AATGTCATATGTGCCTCCTCATGCCTTACTCCACCC...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGCCTCCCCGACAAAGGTaGCGTACAGTTTATTCCTCT +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTPPRQR*RTVYSS
Trigger: AGAGGAATAAACTGTACGTCACCTTTGTCGGGGAGG...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGACGAGTTTCCTAGAGTaGAGGCTTCCTGAAGCACCT +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTTSFLE*RLPEAP
Trigger: AGGTGCTTCAGGAAGCCTGCACTCTAGGAAACTCGT...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACTTCAGCTGCTCCATTTaGTGTATGGAGTTAGATCGC +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNFSCSI*CMELDR
Trigger: GCGATCTAACTCCATACAGCAAATGGAGCAGCTGAA...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGTGTGTACCGCATCTGTaGATTTCGACGCCGCACAAA +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTCVPHL*ISTPHK
Trigger: TTTGTGCGGCGTCGAAATCCACAGATGCGGTACACA...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCGTCCCAGAAGTTGGCTaGAGAATTCTCATCTATGTG +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSVPEVG*RILIYV
Trigger: CACATAGATGAGAATTCTCCAGCCAACTTCTGGGAC...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCACAATTTGTCCTTTTTaGGTTCCAGTCACACCCCTG +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSTICPF*VPVTPL
Trigger: CAGGGGTGTGACTGGAACCCAAAAAGGACAAATTGT...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp TTAAAGAGACACATTCCACTTCTTATCGACAAGACACACCCAGGGACTACCAAGACAATTTGTCCTTTTTaGGTTCCAGTCACACCCCTG +
Preference number: 4 (lower is better)
Translates to: LKRHIPLLIDKTHPGTTKTICPF*VPVTPL
Trigger: CAGGGGTGTGACTGGAACCCAAAAAGGACAAATTGT...CTTGGTAGTCCCTGGGTGTGTCTTGTCGATAAGAAGTGGAATGTGTCTCTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000097741.3
CDS-3UTR CCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACACAATTTGTCCTTTTTaGGTTCCAGTCACACCCCTG +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNTICPF*VPVTPL
Trigger: CAGGGGTGTGACTGGAACCCAAAAAGGACAAATTGT...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGACTGTCCTCGGACACTaGCCCATTAGCACAGATAGT +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTTVLGH*PISTDS
Trigger: ACTATCTGTGCTAATGGGCCAGTGTCCGAGGACAGT...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGCTCCTCCAAAGAAGATaGGTAGCCCAAGTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTLLQRR*VAQVLL
Trigger: CAGCAAGACTTGGGCTACCCATCTTCTTTGGAGGAG...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGTGTCATCCTCTGGTTTaGTCTGAGATGTCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTCHPLV*SEMSGS
Trigger: GGAGCCTGACATCTCAGACCAAACCAGAGGATGACA...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGCACGGTGAAGAACTCTaGGCTGATGAGGAACTTCAC +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTHGEEL*ADEELH
Trigger: GTGAAGTTCCTCATCAGCCCAGAGTTCTTCACCGTG...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGGTCATTGTAGGCCACTaGAACCATGTCCTGGTACTG +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTVIVGH*NHVLVL
Trigger: CAGTACCAGGACATGGTTCCAGTGGCCTACAATGAC...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCTCCGTTCGGATAAATTaGATCTTCTCCCTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSSVRIN*IFSLSE
Trigger: CTCACTCAGGGAGAAGATCCAATTTATCCGAACGGA...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGGTTCTTCTCTGTGACTaGAATATTGGCTCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTVLLCD*NIGSPW
Trigger: CCAGGGGGAGCCAATATTCCAGTCACAGAGAAGAAC...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACTCGTCTGAGTCAATATaGAGCATCGCATTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNSSESI*SIALSL
Trigger: AAGACTCAATGCGATGCTTCATATTGACTCAGACGA...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGTCTTGTTCTTCTCTGTaGCTGGAATATTGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTSCSSL*LEYWLP
Trigger: GGGGAGCCAATATTCCAGTCACAGAGAAGAACAAGA...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp TTTTGGGTCCAGTGCACTTTATTGAGCATAAGGGCACTTATTAAAGAGACACATACGAGTTTCCTAGAGTaGAGGCTTCCTGAAGCACCT +
Preference number: 4 (lower is better)
Translates to: FWVQCTLLSIRALIKETHTSFLE*RLPEAP
Trigger: AGGTGCTTCAGGAAGCCTGCACTCTAGGAAACTCGT...ATGTGTCTCTTTAATAAGTGCCCTTATGCTCAATAAAGTGCACTGGACCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097741.3
CDS-3UTR GCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGGAGTATTTCTCTCTGTaGCAGATCGGATTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTEYFSL*QIGLVV
Trigger: CACCACCAATCCGATCTGGCACAGAGAGAAATACTC...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGTACTGTCATGATGGCTaGCTGGCATATCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTYCHDG*LAYPPH
Trigger: ATGAGGAGGATATGCCAGGCAGCCATCATGACAGTA...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGTCATGGTTCTGCGGATaGTCTGATAACGTCGGTTCA +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTSWFCG*SDNVGS
Trigger: TGAACCGACGTTATCAGAGCATCCGCAGAACCATGA...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGGCACTAGGGTTAGAATaGAGCACGGTGAAGAACTCT +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTALGLE*STVKNS
Trigger: AGAGTTCTTCACCGTGCTGCATTCTAACCCTAGTGC...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGAAGATAATGAGGTTCTaGGCTTGCCCCAGCGTGTAT +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTKIMRF*ACPSVY
Trigger: ATACACGCTGGGGCAAGCCCAGAACCTCATTATCTT...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGCCCCATCATCACAGCTaGGTTCTTCACGGTAATACA +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTPHHHS*VLHGNT
Trigger: TGTATTACCGTGAAGAACCCAGCTGTGATGATGGGG...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGCATCTGCACCACTTGTaGGCTGATCTACTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTHLHHL*ADLLLE
Trigger: CTCAAGAAGTAGATCAGCCCACAAGTGGTGCAGATG...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGATTGAATGTACTGGATaGCCTGGGAAGAACTGGTGG +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTIECTG*PGKNWW
Trigger: CCACCAGTTCTTCCCAGGCCATCCAGTACATTCAAT...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR CAA 72 bp CCATGGAGTTTATCATGTGCAGGTTCTTCTTTTATCTaGGAACATGGGACCAAATGGGAAAGGTTTGGCAGT +
Preference number: 4 (lower is better)
Translates to: PWSLSCAGSSFI*EHGTKWERFGS
Trigger: ACTGCCAAACCTTTCCCATTTGGTCCCATGTTCCAAGATAAAAGAAGAACCTGCACATGATAAACTCCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGATGGTCTTCTTCGTCTaGGTCAATATGAAGCATCGC +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTMVFFV*VNMKHR
Trigger: GCGATGCTTCATATTGACTCAGACGAAGAAGACCAT...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGATAAGCTCAGTAACATaGCAAGGTCTGCATCGCTTG +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTISSVT*QGLHRL
Trigger: CAAGCGATGCAGACCTTGTCATGTTACTGAGCTTAT...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR TCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGTGTTTCTCCAGTCATTaGGATCTATCTCAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTCFSSH*DLSQLC
Trigger: GCACAGCTGAGATAGATCTCAATGACTGGAGAAACA...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp TTTTGGGTCCAGTGCACTTTATTGAGCATAAGGGCACTTATTAAAGAGACACATAAGATAATGAGGTTCTaGGCTTGCCCCAGCGTGTAT +
Preference number: 4 (lower is better)
Translates to: FWVQCTLLSIRALIKETHKIMRF*ACPSVY
Trigger: ATACACGCTGGGGCAAGCCCAGAACCTCATTATCTT...ATGTGTCTCTTTAATAAGTGCCCTTATGCTCAATAAAGTGCACTGGACCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000097741.3
CDS-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGGTCCCAGAAGTTGGCTaGAGAATTCTCATCTATGTG +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTVPEVG*RILIYV
Trigger: CACATAGATGAGAATTCTCCAGCCAACTTCTGGGAC...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGACTGCTCTTCTTCCCTaGCTGAATGGACATCTTAAG +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTTALLP*LNGHLK
Trigger: CTTAAGATGTCCATTCAGCCAGGGAAGAAGAGCAGT...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCGAATTTCAAGGATGTTaGGTTGACGCAAAAACGCAA +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSEFQGC*VDAKTQ
Trigger: TTGCGTTTTTGCGTCAACCCAACATCCTTGAAATTC...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACCTACAAAGGCAGACATaGGACTTATTTGCACTGTAT +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNLQRQT*DLFALY
Trigger: ATACAGTGCAAATAAGTCCCATGTCTGCCTTTGTAG...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCCTACAAAGGCAGACATaGGACTTATTTGCACTGTAT +
Preference number: 4 (lower is better)
Translates to: LDNKAQIILPATHEISLSLQRQT*DLFALY
Trigger: ATACAGTGCAAATAAGTCCCATGTCTGCCTTTGTAG...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR CAA 72 bp TCCCTACCTTTGCATGCCATTGCCATCGAGGTAGTGTaGAATAGATCAGCCTTCATCCTTTTGTTTTTAAGA +
Preference number: 4 (lower is better)
Translates to: SLPLHAIAIEVV*NRSAFILLFLR
Trigger: TCTTAAAAACAAAAGGATGAAGGCTGATCTATTCAACACTACCTCGATGGCAATGGCATGCAAAGGTAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACGACATGGGACTTATTTaGACTGTATATGTGTCATTG +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNDMGLI*TVYVSL
Trigger: CAATGACACATATACAGTGCAAATAAGTCCCATGTC...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACACTGGTCTCTTCAACTaGTGTCAAGAGTTTTTCATA +
Preference number: 4 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNTGLFN*CQEFFI
Trigger: TATGAAAAACTCTTGACAGCAGTTGAAGAGACCAGT...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGAGGTCCAGGATGTCATaGATGTCATTGTCTTTCATC +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTRSRMS*MSLSFI
Trigger: GATGAAAGACAATGACATCCATGACATCCTGGACCT...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGGAATTTCAAGGATGTTaGGTTGACGCAAAAACGCAA +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTEFQGC*VDAKTQ
Trigger: TTGCGTTTTTGCGTCAACCCAACATCCTTGAAATTC...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGGACATGGGACTTATTTaGACTGTATATGTGTCATTG +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTDMGLI*TVYVSL
Trigger: CAATGACACATATACAGTGCAAATAAGTCCCATGTC...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR GCA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGTCTCGTTCAGTAATCTaGCCAAAAACTTCTTCATTC +
Preference number: 4 (lower is better)
Translates to: NNESQVSGWCLFHTLASTSRSVI*PKTSSF
Trigger: GAATGAAGAAGTTTTTGGGCAGATTACTGAACGAGA...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR CAA 72 bp CATTTTGGCATCTTTGATAGTTTGAAGATCCTTGTGTaGCTCCTTCATAGCTCAGTCCTCATACACATACTT +
Preference number: 4 (lower is better)
Translates to: HFGIFDSLKILV*LLHSSVLIHIL
Trigger: AAGTATGTGTATGAGGACTGAGCTATGAAGGAGCAACACAAGGATCTTCAAACTATCAAAGATGCCAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR CAA 72 bp AGTGTCTGGATACATTTAAAACTGTTATTTGAGAAGTaGGCTGCCTTAGCATCAACAGCAAACAACGTTTAT +
Preference number: 4 (lower is better)
Translates to: SVWIHLKLLFEK*AALASTANNVY
Trigger: ATAAACGTTGTTTGCTGTTGATGCTAAGGCAGCCAACTTCTCAAATAACAGTTTTAAATGTATCCAGACACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
3UTR CAA 72 bp TCTGCTGTCATGATTAACTTCTTCAATATAAAATACTaGCTAGACCTCCTTTTGCAATGTAGTAACCTCACA +
Preference number: 4 (lower is better)
Translates to: SAVMINFFNIKY*LDLLLQCSNLT
Trigger: TGTGAGGTTACTACATTGCAAAAGGAGGTCTAGCAAGTATTTTATATTGAAGAAGTTAATCATGACAGCAGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS TCA 90 bp CCTCCCAGTTTGGTGGGAGAGCCTCATCCACCCTCTGGTACCGGCTaGCGTCCTGGCGCACGGAAGGTAGTGACCTCAAGGGCTGGTGGC +
Preference number: 5 (lower is better)
Translates to: PPSLVGEPHPPSGTG*RPGARKVVTSRAGG
Trigger: GCCACCAGCCCTTGAGGTCACTACCTTCCGTGCGCCAGGACGTCAGCCGGTACCAGAGGGTGGATGAGGCTCTCCCACCAAACTGGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS TCA 90 bp CCGTGTCTCCACGGAGGACAGCTGTGTAGTCACGCTCTCATTGCATaGGCTGTCTGCGCCTTCCGGGTCACTCTCCCCCTCAGGTCTGGT +
Preference number: 5 (lower is better)
Translates to: PCLHGGQLCSHALIA*AVCAFRVTLPLRSG
Trigger: ACCAGACCTGAGGGGGAGAGTGACCCGGAAGGCGCAGACAGCTCATGCAATGAGAGCGTGACTACACAGCTGTCCTCCGTGGAGACACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CCA 90 bp TCACTGTTGGCCCGCTGTAGGGCCATGTTCTCGGGCATTGAGTTCTaGGCTGCCAGGCTCTGGAGGTTCTCTGGGCTCAGTGTGTACCGC +
Preference number: 5 (lower is better)
Translates to: SLLARCRAMFSGIEF*AARLWRFSGLSVYR
Trigger: GCGGTACACACTGAGCCCAGAGAACCTCCAGAGCCTGGCAGCCCAGAACTCAATGCCCGAGAACATGGCCCTACAGCGGGCCAACAGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087659.11
ENSMUST00000097741.3
ENSMUST00000120904.8
CDS CCA 90 bp AGCTGTCTGCGCCTTCCGGGTCACTCTCCCCCTCAGGTCTGGTACTaGCCTCACTCACACTCTCTGTCCTTGCAGGGTCACTGGGTTCTG +
Preference number: 5 (lower is better)
Translates to: SCLRLPGHSPPQVWY*PHSHSLSLQGHWVL
Trigger: CAGAACCCAGTGACCCTGCAAGGACAGAGAGTGTGAGTGAGGCCAGTACCAGACCTGAGGGGGAGAGTGACCCGGAAGGCGCAGACAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CCA 90 bp TGCATGAGCTGTCTGCGCCTTCCGGGTCACTCTCCCCCTCAGGTCTaGTACTGGCCTCACTCACACTCTCTGTCCTTGCAGGGTCACTGG +
Preference number: 5 (lower is better)
Translates to: CMSCLRLPGHSPPQV*YWPHSHSLSLQGHW
Trigger: CCAGTGACCCTGCAAGGACAGAGAGTGTGAGTGAGGCCAGTACCAGACCTGAGGGGGAGAGTGACCCGGAAGGCGCAGACAGCTCATGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CCA 90 bp TTTGGTGGGAGAGCCTCATCCACCCTCTGGTACCGGCTGACGTCCTaGCGCACGGAAGGTAGTGACCTCAAGGGCTGGTGGCCATTGGTT +
Preference number: 5 (lower is better)
Translates to: FGGRASSTLWYRLTS*RTEGSDLKGWWPLV
Trigger: AACCAATGGCCACCAGCCCTTGAGGTCACTACCTTCCGTGCGCCAGGACGTCAGCCGGTACCAGAGGGTGGATGAGGCTCTCCCACCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CCA 90 bp TCAATCCGTGCCTCCCAGTTTGGTGGGAGAGCCTCATCCACCCTCTaGTACCGGCTGACGTCCTGGCGCACGGAAGGTAGTGACCTCAAG +
Preference number: 5 (lower is better)
Translates to: SIRASQFGGRASSTL*YRLTSWRTEGSDLK
Trigger: CTTGAGGTCACTACCTTCCGTGCGCCAGGACGTCAGCCGGTACCAGAGGGTGGATGAGGCTCTCCCACCAAACTGGGAGGCACGGATTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CCA 90 bp TCTGGGCTTGCCCCAGCGTGTATTCGTACATGCTGGCAGTCAGGCTaGAGCGGCTCTCAGAAGTCACCAGATCCGTGTCACTGTTGGCCC +
Preference number: 5 (lower is better)
Translates to: SGLAPACIRTCWQSG*SGSQKSPDPCHCWP
Trigger: GGGCCAACAGTGACACGGATCTGGTGACTTCTGAGAGCCGCTCCAGCCTGACTGCCAGCATGTACGAATACACGCTGGGGCAAGCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087659.11
ENSMUST00000097741.3
ENSMUST00000120904.8
CDS CCA 90 bp ACACCTGGGAAGGTTCAGATCCCTGGTCCAGGGACTCGGTCTCACTaGCAGCTCTGCGGCTCCCTCCAGATGTGTCAGAAGCTCCTGCAT +
Preference number: 5 (lower is better)
Translates to: TPGKVQIPGPGTRSH*QLCGSLQMCQKLLH
Trigger: ATGCAGGAGCTTCTGACACATCTGGAGGGAGCCGCAGAGCTGCCAGTGAGACCGAGTCCCTGGACCAGGGATCTGAACCTTCCCAGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS GCA 90 bp GACCGTATTGAATGTACTGGATGGCCTGGGAAGAACTGGTGGTCCTaGGTGCCGAGAGTCTTCTCCTACCTCACCCGCACTGTGGCTGCG +
Preference number: 5 (lower is better)
Translates to: DRIECTGWPGKNWWS*VPRVFSYLTRTVAA
Trigger: CGCAGCCACAGTGCGGGTGAGGTAGGAGAAGACTCTCGGCACGCAGGACCACCAGTTCTTCCCAGGCCATCCAGTACATTCAATACGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CCA 90 bp CGGAAGGGCTGCCCAGGTCTCCATTCACAGTGTGGACTCCGAGGATaGTGCCGACAGCCTCTGGAGAAGCATCTTCGTGAGCAGAAGATG +
Preference number: 5 (lower is better)
Translates to: RKGCPGLHSQCGLRG*CRQPLEKHLREQKM
Trigger: CATCTTCTGCTCACGAAGATGCTTCTCCAGAGGCTGTCGGCACCATCCTCGGAGTCCACACTGTGAATGGAGACCTGGGCAGCCCTTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCCCCTTCGCAGGCACCTaGGGCATCCCCAGCATCCCC +
Preference number: 5 (lower is better)
Translates to: LLGCSMGTKLTPILPKELPFAGT*GIPSIP
Trigger: GGGGATGCTGGGGATGCCCAAGGTGCCTGCGAAGGG...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS GCA 90 bp TACTGTCATGATGGCTGCCTGGCATATCCTCCTCATCGGAAGGGCTaGCCAGGTCTCCATTCACAGTGTGGACTCCGAGGATGGTGCCGA +
Preference number: 5 (lower is better)
Translates to: YCHDGCLAYPPHRKG*PGLHSQCGLRGWCR
Trigger: TCGGCACCATCCTCGGAGTCCACACTGTGAATGGAGACCTGGGCAGCCCTTCCGATGAGGAGGATATGCCAGGCAGCCATCATGACAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CCA 90 bp ATATCCTCCTCATCGGAAGGGCTGCCCAGGTCTCCATTCACAGTGTaGACTCCGAGGATGGTGCCGACAGCCTCTGGAGAAGCATCTTCG +
Preference number: 5 (lower is better)
Translates to: ISSSSEGLPRSPFTV*TPRMVPTASGEASS
Trigger: CGAAGATGCTTCTCCAGAGGCTGTCGGCACCATCCTCGGAGTCCACACTGTGAATGGAGACCTGGGCAGCCCTTCCGATGAGGAGGATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CCA 90 bp CGGCCTACTGACCGTATTGAATGTACTGGATGGCCTGGGAAGAACTaGTGGTCCTGCGTGCCGAGAGTCTTCTCCTACCTCACCCGCACT +
Preference number: 5 (lower is better)
Translates to: RPTDRIECTGWPGKN*WSCVPRVFSYLTRT
Trigger: AGTGCGGGTGAGGTAGGAGAAGACTCTCGGCACGCAGGACCACCAGTTCTTCCCAGGCCATCCAGTACATTCAATACGGTCAGTAGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS TCA 90 bp ACACTGTCCTCGGACACTGGCCCATTAGCACAGATAGTACTGTCATaGTGGCTGCCTGGCATATCCTCCTCATCGGAAGGGCTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: TLSSDTGPLAQIVLS*WLPGISSSSEGLPR
Trigger: CCTGGGCAGCCCTTCCGATGAGGAGGATATGCCAGGCAGCCATCATGACAGTACTATCTGTGCTAATGGGCCAGTGTCCGAGGACAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS GCA 90 bp CCGACGGAAGTCTGCGCTGGCTTGGTGAAAGTCGGCTTCCTCCCCTaGCCCATCGATAGCACTGGTATTTTCCTCAGGCCTCTCATTAGT +
Preference number: 5 (lower is better)
Translates to: PTEVCAGLVKVGFLP*PIDSTGIFLRPLIS
Trigger: ACTAATGAGAGGCCTGAGGAAAATACCAGTGCTATCGATGGGGCAGGGGAGGAAGCCGACTTTCACCAAGCCAGCGCAGACTTCCGTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS GCA 90 bp CGCACTGTGGCTGCGTTGCCTCGTCAGGTGTTGTCGATGAACCAATaGACTTGTGGGCCTACTGCTCTGAAGTGGGAGCCGAGGATCAAT +
Preference number: 5 (lower is better)
Translates to: RTVAALPRQVLSMNQ*TCGPTALKWEPRIN
Trigger: ATTGATCCTCGGCTCCCACTTCAGAGCAGTAGGCCCACAAGTGCATTGGTTCATCGACAACACCTGACGAGGCAACGCAGCCACAGTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CCA 90 bp CCTACTGACCGTATTGAATGTACTGGATGGCCTGGGAAGAACTGGTaGTCCTGCGTGCCGAGAGTCTTCTCCTACCTCACCCGCACTGTG +
Preference number: 5 (lower is better)
Translates to: PTDRIECTGWPGKNW*SCVPRVFSYLTRTV
Trigger: CACAGTGCGGGTGAGGTAGGAGAAGACTCTCGGCACGCAGGACCACCAGTTCTTCCCAGGCCATCCAGTACATTCAATACGGTCAGTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CCA 90 bp CATGTCCTGGTACTGCGGCCTACTGACCGTATTGAATGTACTGGATaGCCTGGGAAGAACTGGTGGTCCTGCGTGCCGAGAGTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: HVLVLRPTDRIECTG*PGKNWWSCVPRVFS
Trigger: GGAGAAGACTCTCGGCACGCAGGACCACCAGTTCTTCCCAGGCCATCCAGTACATTCAATACGGTCAGTAGGCCGCAGTACCAGGACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCCGCACTGTGGCTGCGTaGCCTCGTCAGGTGTTGTCG +
Preference number: 5 (lower is better)
Translates to: LLGCSMGTKLTPILPKELRTVAA*PRQVLS
Trigger: CGACAACACCTGACGAGGCAACGCAGCCACAGTGCG...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS GCA 90 bp AAGTCCTCCGTGTCGATCTCCAGGGTAGAGCTAGTCCTGAAAGAATaGTTAGGGGTGCCATCAGCAACACTGTCCTCGGACACTGGCCCA +
Preference number: 5 (lower is better)
Translates to: KSSVSISRVELVLKE*LGVPSATLSSDTGP
Trigger: TGGGCCAGTGTCCGAGGACAGTGTTGCTGATGGCACCCCTAAGCATTCTTTCAGGACTAGCTCTACCCTGGAGATCGACACGGAGGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CCA 90 bp GGACACTGGCCCATTAGCACAGATAGTACTGTCATGATGGCTGCCTaGCATATCCTCCTCATCGGAAGGGCTGCCCAGGTCTCCATTCAC +
Preference number: 5 (lower is better)
Translates to: GHWPISTDSTVMMAA*HILLIGRAAQVSIH
Trigger: GTGAATGGAGACCTGGGCAGCCCTTCCGATGAGGAGGATATGCCAGGCAGCCATCATGACAGTACTATCTGTGCTAATGGGCCAGTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CCA 90 bp GTGTTGTCGATGAACCAATGCACTTGTGGGCCTACTGCTCTGAAGTaGGAGCCGAGGATCAATGAACGTGGTGGTCCGGGAGTTGTGGTC +
Preference number: 5 (lower is better)
Translates to: VLSMNQCTCGPTALK*EPRINERGGPGVVV
Trigger: GACCACAACTCCCGGACCACCACGTTCATTGATCCTCGGCTCCCACTTCAGAGCAGTAGGCCCACAAGTGCATTGGTTCATCGACAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS TCA 90 bp GAGATGTCAGGCTCCCATCATCAATTCTCGACGCCCTGCTGCACATaGTCAAGCCTCCCTCCTCCTCCAAAGAAGATGGGTAGCCCAAGT +
Preference number: 5 (lower is better)
Translates to: EMSGSHHQFSTPCCT*SSLPPPPKKMGSPS
Trigger: ACTTGGGCTACCCATCTTCTTTGGAGGAGGAGGGAGGCTTGATCATGTGCAGCAGGGCGTCGAGAATTGATGATGGGAGCCTGACATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS TCA 90 bp GAGGCATCCTCATTCTCCACAGGGTTGTCATCCTCTGGTTTGGTCTaGGATGTCAGGCTCCCATCATCAATTCTCGACGCCCTGCTGCAC +
Preference number: 5 (lower is better)
Translates to: EASSFSTGLSSSGLV*DVRLPSSILDALLH
Trigger: GTGCAGCAGGGCGTCGAGAATTGATGATGGGAGCCTGACATCTCAGACCAAACCAGAGGATGACAACCCTGTGGAGAATGAGGATGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS GCA 90 bp GGCAGCTCTGCGGCTCCCTCCAGATGTGTCAGAAGCTCCTGCATCTaGACCACTTGTGGGCTGATCTACTTCTTGAGAGCTACACAATTC +
Preference number: 5 (lower is better)
Translates to: GSSAAPSRCVRSSCI*TTCGLIYFLRATQF
Trigger: GAATTGTGTAGCTCTCAAGAAGTAGATCAGCCCACAAGTGGTGCAGATGCAGGAGCTTCTGACACATCTGGAGGGAGCCGCAGAGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CCA 90 bp TGTAACTTCCACTTTAAACTGGAGGTACCCACTCACGTGGTCAGCTaGGAGCCGTCTGCCAAGGTTGTAGCTGAGCATTTGGTCCCCAGC +
Preference number: 5 (lower is better)
Translates to: CNFHFKLEVPTHVVS*EPSAKVVAEHLVPS
Trigger: GCTGGGGACCAAATGCTCAGCTACAACCTTGGCAGACGGCTCCCAGCTGACCACGTGAGTGGGTACCTCCAGTTTAAAGTGGAAGTTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS TCA 90 bp GGGTTGAGGCTCCAGGTTGGCTTCATTTTCATCAGGGGCTGTACTTaGTGGCAAGGAGCCATCTGCAACCTCTGGAAGATTCTCCAGCCT +
Preference number: 5 (lower is better)
Translates to: GLRLQVGFIFIRGCT*WQGAICNLWKILQP
Trigger: AGGCTGGAGAATCTTCCAGAGGTTGCAGATGGCTCCTTGCCATCAAGTACAGCCCCTGATGAAAATGAAGCCAACCTGGAGCCTCAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS TCA 90 bp CTCTGGATGGCCCACTGTAATCCAACCCTTCCTCCCCGACAAAGGTaGCGTACAGTTTATTCCTCTGCAGGTCCTTTCTGGAGTAGCCCA +
Preference number: 5 (lower is better)
Translates to: LWMAHCNPTLPPRQR*RTVYSSAGPFWSSP
Trigger: TGGGCTACTCCAGAAAGGACCTGCAGAGGAATAAACTGTACGTCACCTTTGTCGGGGAGGAAGGGTTGGATTACAGTGGGCCATCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCCATCAGGGGCTGTACTaGATGGCAAGGAGCCATCTG +
Preference number: 5 (lower is better)
Translates to: LLGCSMGTKLTPILPKELHQGLY*MARSHL
Trigger: CAGATGGCTCCTTGCCATCAAGTACAGCCCCTGATG...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCTGGGCCGCTGCCACGTaGTGGTTCTGTTTACATGGT +
Preference number: 5 (lower is better)
Translates to: LLGCSMGTKLTPILPKELWAAAT*WFCLHG
Trigger: ACCATGTAAACAGAACCACAACGTGGCAGCGGCCCA...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS TCA 90 bp TGGACTCCGAGGATGGTGCCGACAGCCTCTGGAGAAGCATCTTCGTaGGCAGAAGATGTAACTTCCACTTTAAACTGGAGGTACCCACTC +
Preference number: 5 (lower is better)
Translates to: WTPRMVPTASGEASS*AEDVTSTLNWRYPL
Trigger: GAGTGGGTACCTCCAGTTTAAAGTGGAAGTTACATCTTCTGCTCACGAAGATGCTTCTCCAGAGGCTGTCGGCACCATCCTCGGAGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS GCA 90 bp CACCACTTGTGGGCTGATCTACTTCTTGAGAGCTACACAATTCAGTaGTACCCTGGTCTGCACTGGGTTGAGGCTCCAGGTTGGCTTCAT +
Preference number: 5 (lower is better)
Translates to: HHLWADLLLESYTIQ*YPGLHWVEAPGWLH
Trigger: ATGAAGCCAACCTGGAGCCTCAACCCAGTGCAGACCAGGGTAGCACTGAATTGTGTAGCTCTCAAGAAGTAGATCAGCCCACAAGTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CCA 90 bp ACAATTCAGTGCTACCCTGGTCTGCACTGGGTTGAGGCTCCAGGTTaGCTTCATTTTCATCAGGGGCTGTACTTGATGGCAAGGAGCCAT +
Preference number: 5 (lower is better)
Translates to: TIQCYPGLHWVEAPG*LHFHQGLYLMARSH
Trigger: ATGGCTCCTTGCCATCAAGTACAGCCCCTGATGAAAATGAAGCCAACCTGGAGCCTCAACCCAGTGCAGACCAGGGTAGCACTGAATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CCA 90 bp GGCTCCCTCCAGATGTGTCAGAAGCTCCTGCATCTGCACCACTTGTaGGCTGATCTACTTCTTGAGAGCTACACAATTCAGTGCTACCCT +
Preference number: 5 (lower is better)
Translates to: GSLQMCQKLLHLHHL*ADLLLESYTIQCYP
Trigger: AGGGTAGCACTGAATTGTGTAGCTCTCAAGAAGTAGATCAGCCCACAAGTGGTGCAGATGCAGGAGCTTCTGACACATCTGGAGGGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCGTGTCCCGCCGGACTTaGGTGATCATGTGCTTCAAA +
Preference number: 5 (lower is better)
Translates to: LLGCSMGTKLTPILPKELVSRRT*VIMCFK
Trigger: TTTGAAGCACATGATCACCAAAGTCCGGCGGGACAC...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACCGCACTGTGGCTGCGTaGCCTCGTCAGGTGTTGTCG +
Preference number: 5 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNRTVAA*PRQVLS
Trigger: CGACAACACCTGACGAGGCAACGCAGCCACAGTGCG...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS GCA 90 bp CTGATCTACTTCTTGAGAGCTACACAATTCAGTGCTACCCTGGTCTaGACTGGGTTGAGGCTCCAGGTTGGCTTCATTTTCATCAGGGGC +
Preference number: 5 (lower is better)
Translates to: LIYFLRATQFSATLV*TGLRLQVGFIFIRG
Trigger: GCCCCTGATGAAAATGAAGCCAACCTGGAGCCTCAACCCAGTGCAGACCAGGGTAGCACTGAATTGTGTAGCTCTCAAGAAGTAGATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CCA 90 bp CTACTTCTTGAGAGCTACACAATTCAGTGCTACCCTGGTCTGCACTaGGTTGAGGCTCCAGGTTGGCTTCATTTTCATCAGGGGCTGTAC +
Preference number: 5 (lower is better)
Translates to: LLLESYTIQCYPGLH*VEAPGWLHFHQGLY
Trigger: GTACAGCCCCTGATGAAAATGAAGCCAACCTGGAGCCTCAACCCAGTGCAGACCAGGGTAGCACTGAATTGTGTAGCTCTCAAGAAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCAAGAACATCCCTTTCTaGAGCCCAACTGCCCTGAGA +
Preference number: 5 (lower is better)
Translates to: LLGCSMGTKLTPILPKELKNIPF*SPTALR
Trigger: TCTCAGGGCAGTTGGGCTCAAGAAAGGGATGTTCTT...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCCTGTGCCAGATCGGATaGGTGGTGTTGCTGATGATA +
Preference number: 5 (lower is better)
Translates to: LLGCSMGTKLTPILPKELLCQIG*VVLLMI
Trigger: TATCATCAGCAACACCACCAATCCGATCTGGCACAG...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCGTTGTAGCTGAGCATTaGGTCCCCAGCCTGCCGCTC +
Preference number: 5 (lower is better)
Translates to: LDNKAQIILPATHEISLSVVAEH*VPSLPL
Trigger: GAGCGGCAGGCTGGGGACCAAATGCTCAGCTACAAC...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACGTTGTAGCTGAGCATTaGGTCCCCAGCCTGCCGCTC +
Preference number: 5 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNVVAEH*VPSLPL
Trigger: GAGCGGCAGGCTGGGGACCAAATGCTCAGCTACAAC...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCTCATTCTCCACAGGGTaGTCATCCTCTGGTTTGGTC +
Preference number: 5 (lower is better)
Translates to: LLGCSMGTKLTPILPKELSFSTG*SSSGLV
Trigger: GACCAAACCAGAGGATGACAACCCTGTGGAGAATGA...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCGATGAACCAATGCACTaGTGGGCCTACTGCTCTGAA +
Preference number: 5 (lower is better)
Translates to: LLGCSMGTKLTPILPKELDEPMH*WAYCSE
Trigger: TTCAGAGCAGTAGGCCCACAAGTGCATTGGTTCATC...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCGTTCAGCTGCTCCATTaGCTGTATGGAGTTAGATCG +
Preference number: 5 (lower is better)
Translates to: LLGCSMGTKLTPILPKELVQLLH*LYGVRS
Trigger: CGATCTAACTCCATACAGCAAATGGAGCAGCTGAAC...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCTTGTTAGCAAACATGTaGAGGAATCCCACGAGGTCC +
Preference number: 5 (lower is better)
Translates to: LLGCSMGTKLTPILPKELLLANM*RNPTRS
Trigger: GGACCTCGTGGGATTCCTCAACATGTTTGCTAACAA...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCCAAGGTCTGCATCGCTaGAGAGCCGCACCAATCCAG +
Preference number: 5 (lower is better)
Translates to: LDNKAQIILPATHEISLSQGLHR*RAAPIQ
Trigger: CTGGATTGGTGCGGCTCTCAAGCGATGCAGACCTTG...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp TTATCGACAAGACACACCCAGGGACTACCAAGCTTCACTTCTGTCTCCTCAAAAAATGAGGTTCTGGGCTaGCCCCAGCGTGTATTCGTA +
Preference number: 5 (lower is better)
Translates to: LSTRHTQGLPSFTSVSSKNEVLG*PQRVFV
Trigger: TACGAATACACGCTGGGGCAAGCCCAGAACCTCATT...TTTTGAGGAGACAGAAGTGAAGCTTGGTAGTCCCTGGGTGTGTCTTGTCGATAA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000097741.3
CDS-3UTR CAA 90 bp TCTTATCGACAAGACACACCCAGGGACTACCAAGCTTCACTTCTGTCTCCTCAAAAGAACATCCCTTTCTaGAGCCCAACTGCCCTGAGA +
Preference number: 5 (lower is better)
Translates to: SYRQDTPRDYQASLLSPQKNIPF*SPTALR
Trigger: TCTCAGGGCAGTTGGGCTCAAGAAAGGGATGTTCTT...TTGAGGAGACAGAAGTGAAGCTTGGTAGTCCCTGGGTGTGTCTTGTCGATAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097741.3
CDS-3UTR CAA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCATGATGGGCCGGCTCTaGGCAAATTTGTCTTTGATT +
Preference number: 5 (lower is better)
Translates to: LLGCSMGTKLTPILPKELMMGRL*ANLSLI
Trigger: AATCAAAGACAAATTTGCCAAGAGCCGGCCCATCAT...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACGGCCTGGCGGGGCCATaGTGTTCAATAGCATCTAAG +
Preference number: 5 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNGLAGP*CSIASK
Trigger: CTTAGATGCTATTGAACACAATGGCCCCGCCAGGCC...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCGGCCTGGCGGGGCCATaGTGTTCAATAGCATCTAAG +
Preference number: 5 (lower is better)
Translates to: LDNKAQIILPATHEISLSGLAGP*CSIASK
Trigger: CTTAGATGCTATTGAACACAATGGCCCCGCCAGGCC...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCCATCAGGGGCTGTACTaGATGGCAAGGAGCCATCTG +
Preference number: 5 (lower is better)
Translates to: LDNKAQIILPATHEISLSHQGLY*MARSHL
Trigger: CAGATGGCTCCTTGCCATCAAGTACAGCCCCTGATG...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCTGGGCCGCTGCCACGTaGTGGTTCTGTTTACATGGT +
Preference number: 5 (lower is better)
Translates to: LDNKAQIILPATHEISLSWAAAT*WFCLHG
Trigger: ACCATGTAAACAGAACCACAACGTGGCAGCGGCCCA...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CCA 90 bp TTGGGTTCCAGTCACACCCCTGTTTTTAGAGTCCCAGAAGTTGGCTaGAGAATTCTCATCTATGTGATAGAGTCCTATCCAATCGCTGGG +
Preference number: 5 (lower is better)
Translates to: LGSSHTPVFRVPEVG*RILIYVIESYPIAG
Trigger: CCCAGCGATTGGATAGGACTCTATCACATAGATGAGAATTCTCCAGCCAACTTCTGGGACTCTAAAAACAGGGGTGTGACTGGAACCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000087659.11
ENSMUST00000097741.3
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACAATGAGGTTCTGGGCTaGCCCCAGCGTGTATTCGTA +
Preference number: 5 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNNEVLG*PQRVFV
Trigger: TACGAATACACGCTGGGGCAAGCCCAGAACCTCATT...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp TTATCGACAAGACACACCCAGGGACTACCAAGCTTCACTTCTGTCTCCTCAAAACTGTGCCAGATCGGATaGGTGGTGTTGCTGATGATA +
Preference number: 5 (lower is better)
Translates to: LSTRHTQGLPSFTSVSSKLCQIG*VVLLMI
Trigger: TATCATCAGCAACACCACCAATCCGATCTGGCACAG...TTTTGAGGAGACAGAAGTGAAGCTTGGTAGTCCCTGGGTGTGTCTTGTCGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097741.3
CDS-3UTR CAA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCGTGTCCCGCCGGACTTaGGTGATCATGTGCTTCAAA +
Preference number: 5 (lower is better)
Translates to: LDNKAQIILPATHEISLSVSRRT*VIMCFK
Trigger: TTTGAAGCACATGATCACCAAAGTCCGGCGGGACAC...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACTCATCTCCCAGCCCCTaGGTAGTTCCAGCTGTTTGT +
Preference number: 5 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNSSPSP*VVPAVC
Trigger: ACAAACAGCTGGAACTACCAAGGGGCTGGGAGATGA...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACGGCCTACTGACCGTATaGAATGTACTGGATGGCCTG +
Preference number: 5 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNGLLTV*NVLDGL
Trigger: CAGGCCATCCAGTACATTCAATACGGTCAGTAGGCC...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCATCAGGTTGACGCTCTaGCAGAATTTCAAGGATGTT +
Preference number: 5 (lower is better)
Translates to: LLGCSMGTKLTPILPKELIRLTL*QNFKDV
Trigger: AACATCCTTGAAATTCTGCAAGAGCGTCAACCTGAT...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp CTGTTGGGTTGTTCCATGGGCACCAAGCTCACCCCAATCCTTCCAAAAGAACTCTTGTTTCTCCAGTCATaGAGATCTATCTCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: LLGCSMGTKLTPILPKELLFLQS*RSISAV
Trigger: CACAGCTGAGATAGATCTCAATGACTGGAGAAACAA...GAGTTCTTTTGGAAGGATTGGGGTGAGCTTGGTGCCCATGGAACAACCCAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp TTATCGACAAGACACACCCAGGGACTACCAAGCTTCACTTCTGTCTCCTCAAAAATCGGATTGGTGGTGTaGCTGATGATAGTGGACCTT +
Preference number: 5 (lower is better)
Translates to: LSTRHTQGLPSFTSVSSKIGLVV*LMIVDL
Trigger: AAGGTCCACTATCATCAGCAACACCACCAATCCGAT...TTTTGAGGAGACAGAAGTGAAGCTTGGTAGTCCCTGGGTGTGTCTTGTCGATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000097741.3
CDS-3UTR CAA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACTGGGTAGCCCAAGTCTaGCTGAAACTCATGGTCTTC +
Preference number: 5 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNWVAQV*LKLMVF
Trigger: GAAGACCATGAGTTTCAGCAAGACTTGGGCTACCCA...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCTCATTCTCCACAGGGTaGTCATCCTCTGGTTTGGTC +
Preference number: 5 (lower is better)
Translates to: LDNKAQIILPATHEISLSSFSTG*SSSGLV
Trigger: GACCAAACCAGAGGATGACAACCCTGTGGAGAATGA...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACGATGAACCAATGCACTaGTGGGCCTACTGCTCTGAA +
Preference number: 5 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNDEPMH*WAYCSE
Trigger: TTCAGAGCAGTAGGCCCACAAGTGCATTGGTTCATC...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCCCACACAGAATCTTCTaGGACCATTACTCCCTCGGA +
Preference number: 5 (lower is better)
Translates to: LDNKAQIILPATHEISLSPHRIF*DHYSLG
Trigger: TCCGAGGGAGTAATGGTCCAAGAAGATTCTGTGTGG...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS TCA 90 bp AGATGGGTAGCCCAAGTCTTGCTGAAACTCATGGTCTTCTTCGTCTaGGTCAATATGAAGCATCGCATTGAGTCTTGTGTCAGTGGGAAA +
Preference number: 5 (lower is better)
Translates to: RWVAQVLLKLMVFFV*VNMKHRIESCVSGK
Trigger: TTTCCCACTGACACAAGACTCAATGCGATGCTTCATATTGACTCAGACGAAGAAGACCATGAGTTTCAGCAAGACTTGGGCTACCCATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGAATGAGGTTCTGGGCTaGCCCCAGCGTGTATTCGTA +
Preference number: 5 (lower is better)
Translates to: NNESQVSGWCLFHTLASTNEVLG*PQRVFV
Trigger: TACGAATACACGCTGGGGCAAGCCCAGAACCTCATT...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp TTCACTTCTGTCTCCTCAAAAACTAATCTCAGAAGAGAGGCAAGTGAGGGGCAGTTAGAGTCCCAGAAGTaGGCTGGAGAATTCTCATCT +
Preference number: 5 (lower is better)
Translates to: FTSVSSKTNLRREASEGQLESQK*AGEFSS
Trigger: AGATGAGAATTCTCCAGCCAACTTCTGGGACTCTAA...CTGCCCCTCACTTGCCTCTCTTCTGAGATTAGTTTTTGAGGAGACAGAAGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000097741.3
CDS-3UTR CAA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACATCGGATTGGTGGTGTaGCTGATGATAGTGGACCTT +
Preference number: 5 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNIGLVV*LMIVDL
Trigger: AAGGTCCACTATCATCAGCAACACCACCAATCCGAT...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCATCGGATTGGTGGTGTaGCTGATGATAGTGGACCTT +
Preference number: 5 (lower is better)
Translates to: LDNKAQIILPATHEISLSIGLVV*LMIVDL
Trigger: AAGGTCCACTATCATCAGCAACACCACCAATCCGAT...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCGTTCAGCTGCTCCATTaGCTGTATGGAGTTAGATCG +
Preference number: 5 (lower is better)
Translates to: LDNKAQIILPATHEISLSVQLLH*LYGVRS
Trigger: CGATCTAACTCCATACAGCAAATGGAGCAGCTGAAC...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACTTGTTAGCAAACATGTaGAGGAATCCCACGAGGTCC +
Preference number: 5 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNLLANM*RNPTRS
Trigger: GGACCTCGTGGGATTCCTCAACATGTTTGCTAACAA...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGTCATCTCCCAGCCCCTaGGTAGTTCCAGCTGTTTGT +
Preference number: 5 (lower is better)
Translates to: NNESQVSGWCLFHTLASTSSPSP*VVPAVC
Trigger: ACAAACAGCTGGAACTACCAAGGGGCTGGGAGATGA...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGGGCCTACTGACCGTATaGAATGTACTGGATGGCCTG +
Preference number: 5 (lower is better)
Translates to: NNESQVSGWCLFHTLASTGLLTV*NVLDGL
Trigger: CAGGCCATCCAGTACATTCAATACGGTCAGTAGGCC...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACTCTGTGACTGGAATATaGGCTCCCCCTGGTTTTAAC +
Preference number: 5 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNSVTGI*APPGFN
Trigger: GTTAAAACCAGGGGGAGCCAATATTCCAGTCACAGA...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCTCTGTGACTGGAATATaGGCTCCCCCTGGTTTTAAC +
Preference number: 5 (lower is better)
Translates to: LDNKAQIILPATHEISLSSVTGI*APPGFN
Trigger: GTTAAAACCAGGGGGAGCCAATATTCCAGTCACAGA...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACTTAGAGTCCCAGAAGTaGGCTGGAGAATTCTCATCT +
Preference number: 5 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNLESQK*AGEFSS
Trigger: AGATGAGAATTCTCCAGCCAACTTCTGGGACTCTAA...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGAAGAACATCCCTTTCTaGAGCCCAACTGCCCTGAGA +
Preference number: 5 (lower is better)
Translates to: NNESQVSGWCLFHTLASTKNIPF*SPTALR
Trigger: TCTCAGGGCAGTTGGGCTCAAGAAAGGGATGTTCTT...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGCTGTGCCAGATCGGATaGGTGGTGTTGCTGATGATA +
Preference number: 5 (lower is better)
Translates to: NNESQVSGWCLFHTLASTLCQIG*VVLLMI
Trigger: TATCATCAGCAACACCACCAATCCGATCTGGCACAG...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCATGATGGGCCGGCTCTaGGCAAATTTGTCTTTGATT +
Preference number: 5 (lower is better)
Translates to: LDNKAQIILPATHEISLSMMGRL*ANLSLI
Trigger: AATCAAAGACAAATTTGCCAAGAGCCGGCCCATCAT...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp TTAAAGAGACACATTCCACTTCTTATCGACAAGACACACCCAGGGACTACCAAGATGATGGGCCGGCTCTaGGCAAATTTGTCTTTGATT +
Preference number: 5 (lower is better)
Translates to: LKRHIPLLIDKTHPGTTKMMGRL*ANLSLI
Trigger: AATCAAAGACAAATTTGCCAAGAGCCGGCCCATCAT...CTTGGTAGTCCCTGGGTGTGTCTTGTCGATAAGAAGTGGAATGTGTCTCTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097741.3
CDS-3UTR CAA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCGGGCTGATCTACTTCTaGAGAGCTACACAATTCAGT +
Preference number: 5 (lower is better)
Translates to: LDNKAQIILPATHEISLSGLIYF*RATQFS
Trigger: ACTGAATTGTGTAGCTCTCAAGAAGTAGATCAGCCC...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGCTGCATCTGCACCACTaGTGGGCTGATCTACTTCTT +
Preference number: 5 (lower is better)
Translates to: NNESQVSGWCLFHTLASTLHLHH*WADLLL
Trigger: AAGAAGTAGATCAGCCCACAAGTGGTGCAGATGCAG...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCAGTCGTTGTTCATTGTaGAATCTTTCCACTGCAGCC +
Preference number: 5 (lower is better)
Translates to: LDNKAQIILPATHEISLSSRCSL*NLSTAA
Trigger: GGCTGCAGTGGAAAGATTCAACAATGAACAACGACT...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGCCACACAGAATCTTCTaGGACCATTACTCCCTCGGA +
Preference number: 5 (lower is better)
Translates to: NNESQVSGWCLFHTLASTPHRIF*DHYSLG
Trigger: TCCGAGGGAGTAATGGTCCAAGAAGATTCTGTGTGG...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACCCTCTGTATTCAGTGTaGTTTCTCCAGTCATTGAGA +
Preference number: 5 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNPLYSV*FLQSLR
Trigger: TCTCAATGACTGGAGAAACAACACTGAATACAGAGG...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGGGGCTGATCTACTTCTaGAGAGCTACACAATTCAGT +
Preference number: 5 (lower is better)
Translates to: NNESQVSGWCLFHTLASTGLIYF*RATQFS
Trigger: ACTGAATTGTGTAGCTCTCAAGAAGTAGATCAGCCC...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGGGTAGTTCCAGCTGTTaGTTAGCAAACATGTTGAGG +
Preference number: 5 (lower is better)
Translates to: NNESQVSGWCLFHTLASTGSSSC*LANMLR
Trigger: CCTCAACATGTTTGCTAACAAACAGCTGGAACTACC...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCCTTAGTCGTTGTTCATaGTTGAATCTTTCCACTGCA +
Preference number: 5 (lower is better)
Translates to: LDNKAQIILPATHEISLSLSRCS*LNLSTA
Trigger: TGCAGTGGAAAGATTCAACAATGAACAACGACTAAG...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp TACAACAAGGGTATTTCCCACCAGGTAGATGGCCAATCAATGCCTTCACTAAACCTTAGTCGTTGTTCATaGTTGAATCTTTCCACTGCA +
Preference number: 5 (lower is better)
Translates to: YNKGISHQVDGQSMPSLNLSRCS*LNLSTA
Trigger: TGCAGTGGAAAGATTCAACAATGAACAACGACTAAG...GTTTAGTGAAGGCATTGATTGGCCATCTACCTGGTGGGAAATACCCTTGTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGATCAGGTTGACGCTCTaGCAGAATTTCAAGGATGTT +
Preference number: 5 (lower is better)
Translates to: NNESQVSGWCLFHTLASTIRLTL*QNFKDV
Trigger: AACATCCTTGAAATTCTGCAAGAGCGTCAACCTGAT...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp CTTGACAACAAAGCCCAAATCATTTTACCAGCTACCCATGAAATCAGCCTGAGCAGACATGGGACTTATTaGCACTGTATATGTGTCATT +
Preference number: 5 (lower is better)
Translates to: LDNKAQIILPATHEISLSRHGTY*HCICVI
Trigger: AATGACACATATACAGTGCAAATAAGTCCCATGTCT...GCTCAGGCTGATTTCATGGGTAGCTGGTAAAATGATTTGGGCTTTGTTGTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGCCTCTGTATTCAGTGTaGTTTCTCCAGTCATTGAGA +
Preference number: 5 (lower is better)
Translates to: NNESQVSGWCLFHTLASTPLYSV*FLQSLR
Trigger: TCTCAATGACTGGAGAAACAACACTGAATACAGAGG...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS-3UTR CAA 90 bp AATAATGAAAGCCAGGTCTCTGGTTGGTGTCTTTTTCATACTCTTGCTTCTACGAGACATGGGACTTATTaGCACTGTATATGTGTCATT +
Preference number: 5 (lower is better)
Translates to: NNESQVSGWCLFHTLASTRHGTY*HCICVI
Trigger: AATGACACATATACAGTGCAAATAAGTCCCATGTCT...CGTAGAAGCAAGAGTATGAAAAAGACACCAACCAGAGACCTGGCTTTCATTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS GCA 72 bp AGAACTAGGAGTGCAGACGGACTCCTGCGACCCCTCTaGGGGGCCACTGCTGGTGGGCTCAGCTGCACAGGC +
Preference number: 6 (lower is better)
Translates to: RTRSADGLLRPL*GATAGGLSCTG
Trigger: GCCTGTGCAGCTGAGCCCACCAGCAGTGGCCCCGCAGAGGGGTCGCAGGAGTCCGTCTGCACTCCTAGTTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CCA 72 bp GCCTCCCAGTTTGGTGGGAGAGCCTCATCCACCCTCTaGTACCGGCTGACGTCCTGGCGCACGGAAGGTAGT +
Preference number: 6 (lower is better)
Translates to: ASQFGGRASSTL*YRLTSWRTEGS
Trigger: ACTACCTTCCGTGCGCCAGGACGTCAGCCGGTACCAGAGGGTGGATGAGGCTCTCCCACCAAACTGGGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CAA 72 bp AGCTGGGAGCCGTCTGCCAAGGTTGTAGCTGAGCATTaGGTCCCCAGCCTGCCGCTCCAGCAGCCTCTGCAC +
Preference number: 6 (lower is better)
Translates to: SWEPSAKVVAEH*VPSLPLQQPLH
Trigger: GTGCAGAGGCTGCTGGAGCGGCAGGCTGGGGACCAAATGCTCAGCTACAACCTTGGCAGACGGCTCCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS TCA 72 bp TTGGTGGGAGAGCCTCATCCACCCTCTGGTACCGGCTaGCGTCCTGGCGCACGGAAGGTAGTGACCTCAAGG +
Preference number: 6 (lower is better)
Translates to: LVGEPHPPSGTG*RPGARKVVTSR
Trigger: CCTTGAGGTCACTACCTTCCGTGCGCCAGGACGTCAGCCGGTACCAGAGGGTGGATGAGGCTCTCCCACCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS GCA 72 bp ACAGCAGGTAAAGAACTAGGAGTGCAGACGGACTCCTaGGACCCCTCTGCGGGGCCACTGCTGGTGGGCTCA +
Preference number: 6 (lower is better)
Translates to: TAGKELGVQTDS*DPSAGPLLVGS
Trigger: TGAGCCCACCAGCAGTGGCCCCGCAGAGGGGTCGCAGGAGTCCGTCTGCACTCCTAGTTCTTTACCTGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CCA 72 bp CGCCTTCCGGGTCACTCTCCCCCTCAGGTCTGGTACTaGCCTCACTCACACTCTCTGTCCTTGCAGGGTCAC +
Preference number: 6 (lower is better)
Translates to: RLPGHSPPQVWY*PHSHSLSLQGH
Trigger: GTGACCCTGCAAGGACAGAGAGTGTGAGTGAGGCCAGTACCAGACCTGAGGGGGAGAGTGACCCGGAAGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CAA 72 bp AGGCAGGACGTTCTCCCGACGGAAGTCTGCGCTGGCTaGGTGAAAGTCGGCTTCCTCCCCTGCCCCATCGAT +
Preference number: 6 (lower is better)
Translates to: RQDVLPTEVCAG*VKVGFLPCPID
Trigger: ATCGATGGGGCAGGGGAGGAAGCCGACTTTCACCAAGCCAGCGCAGACTTCCGTCGGGAGAACGTCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CAA 90 bp GAGCACCGTGTCTCCACGGAGGACAGCTGTGTAGTCACGCTCTCATaGCATGAGCTGTCTGCGCCTTCCGGGTCACTCTCCCCCTCAGGT +
Preference number: 6 (lower is better)
Translates to: EHRVSTEDSCVVTLS*HELSAPSGSLSPSG
Trigger: ACCTGAGGGGGAGAGTGACCCGGAAGGCGCAGACAGCTCATGCAATGAGAGCGTGACTACACAGCTGTCCTCCGTGGAGACACGGTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS TCA 72 bp AGGACGTTCTCCCGACGGAAGTCTGCGCTGGCTTGGTaGAAGTCGGCTTCCTCCCCTGCCCCATCGATAGCA +
Preference number: 6 (lower is better)
Translates to: RTFSRRKSALAW*KSASSPAPSIA
Trigger: TGCTATCGATGGGGCAGGGGAGGAAGCCGACTTTCACCAAGCCAGCGCAGACTTCCGTCGGGAGAACGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS GCA 72 bp GTACTGGATGGCCTGGGAAGAACTGGTGGTCCTGCGTaGCGAGAGTCTTCTCCTACCTCACCCGCACTGTGG +
Preference number: 6 (lower is better)
Translates to: VLDGLGRTGGPA*RESSPTSPALW
Trigger: CCACAGTGCGGGTGAGGTAGGAGAAGACTCTCGGCACGCAGGACCACCAGTTCTTCCCAGGCCATCCAGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CCA 72 bp TCTGTCTCAGAGGACACCTGGGAAGGTTCAGATCCCTaGTCCAGGGACTCGGTCTCACTGGCAGCTCTGCGG +
Preference number: 6 (lower is better)
Translates to: SVSEDTWEGSDP*SRDSVSLAALR
Trigger: CCGCAGAGCTGCCAGTGAGACCGAGTCCCTGGACCAGGGATCTGAACCTTCCCAGGTGTCCTCTGAGACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS TCA 72 bp TGTAACAGCAGCGTGAGCCTGGATCTGGAGGTAGAGTaGGGCAGGACGTTCTCCCGACGGAAGTCTGCGCTG +
Preference number: 6 (lower is better)
Translates to: CNSSVSLDLEVE*GRTFSRRKSAL
Trigger: CAGCGCAGACTTCCGTCGGGAGAACGTCCTGCCTCACTCTACCTCCAGATCCAGGCTCACGCTGCTGTTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS GCA 72 bp GATGGCTGCCTGGCATATCCTCCTCATCGGAAGGGCTaGCCAGGTCTCCATTCACAGTGTGGACTCCGAGGA +
Preference number: 6 (lower is better)
Translates to: DGCLAYPPHRKG*PGLHSQCGLRG
Trigger: TCCTCGGAGTCCACACTGTGAATGGAGACCTGGGCAGCCCTTCCGATGAGGAGGATATGCCAGGCAGCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CCA 72 bp GCCCCAGCGTGTATTCGTACATGCTGGCAGTCAGGCTaGAGCGGCTCTCAGAAGTCACCAGATCCGTGTCAC +
Preference number: 6 (lower is better)
Translates to: APACIRTCWQSG*SGSQKSPDPCH
Trigger: GTGACACGGATCTGGTGACTTCTGAGAGCCGCTCCAGCCTGACTGCCAGCATGTACGAATACACGCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087659.11
ENSMUST00000097741.3
ENSMUST00000120904.8
CDS CCA 72 bp GGTTCTGGGCTTGCCCCAGCGTGTATTCGTACATGCTaGCAGTCAGGCTGGAGCGGCTCTCAGAAGTCACCA +
Preference number: 6 (lower is better)
Translates to: GSGLAPACIRTC*QSGWSGSQKSP
Trigger: TGGTGACTTCTGAGAGCCGCTCCAGCCTGACTGCCAGCATGTACGAATACACGCTGGGGCAAGCCCAGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087659.11
ENSMUST00000097741.3
ENSMUST00000120904.8
CDS CCA 72 bp TCATCGGAAGGGCTGCCCAGGTCTCCATTCACAGTGTaGACTCCGAGGATGGTGCCGACAGCCTCTGGAGAA +
Preference number: 6 (lower is better)
Translates to: SSEGLPRSPFTV*TPRMVPTASGE
Trigger: TTCTCCAGAGGCTGTCGGCACCATCCTCGGAGTCCACACTGTGAATGGAGACCTGGGCAGCCCTTCCGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CCA 72 bp AAGGTTCAGATCCCTGGTCCAGGGACTCGGTCTCACTaGCAGCTCTGCGGCTCCCTCCAGATGTGTCAGAAG +
Preference number: 6 (lower is better)
Translates to: KVQIPGPGTRSH*QLCGSLQMCQK
Trigger: CTTCTGACACATCTGGAGGGAGCCGCAGAGCTGCCAGTGAGACCGAGTCCCTGGACCAGGGATCTGAACCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CAA 72 bp GAGCGGCTCTCAGAAGTCACCAGATCCGTGTCACTGTaGGCCCGCTGTAGGGCCATGTTCTCGGGCATTGAG +
Preference number: 6 (lower is better)
Translates to: ERLSEVTRSVSL*ARCRAMFSGIE
Trigger: CTCAATGCCCGAGAACATGGCCCTACAGCGGGCCAACAGTGACACGGATCTGGTGACTTCTGAGAGCCGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087659.11
ENSMUST00000097741.3
ENSMUST00000120904.8
CDS GCA 72 bp CCAGGTCTCCATTCACAGTGTGGACTCCGAGGATGGTaGCGACAGCCTCTGGAGAAGCATCTTCGTGAGCAG +
Preference number: 6 (lower is better)
Translates to: PGLHSQCGLRGW*RQPLEKHLREQ
Trigger: CTGCTCACGAAGATGCTTCTCCAGAGGCTGTCGGCACCATCCTCGGAGTCCACACTGTGAATGGAGACCTGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS GCA 72 bp GTCTGCGCTGGCTTGGTGAAAGTCGGCTTCCTCCCCTaGCCCATCGATAGCACTGGTATTTTCCTCAGGCCT +
Preference number: 6 (lower is better)
Translates to: VCAGLVKVGFLP*PIDSTGIFLRP
Trigger: AGGCCTGAGGAAAATACCAGTGCTATCGATGGGGCAGGGGAGGAAGCCGACTTTCACCAAGCCAGCGCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS GCA 72 bp GCTGCGTTGCCTCGTCAGGTGTTGTCGATGAACCAATaGACTTGTGGGCCTACTGCTCTGAAGTGGGAGCCG +
Preference number: 6 (lower is better)
Translates to: AALPRQVLSMNQ*TCGPTALKWEP
Trigger: CGGCTCCCACTTCAGAGCAGTAGGCCCACAAGTGCATTGGTTCATCGACAACACCTGACGAGGCAACGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS GCA 72 bp GAATGTACTGGATGGCCTGGGAAGAACTGGTGGTCCTaGGTGCCGAGAGTCTTCTCCTACCTCACCCGCACT +
Preference number: 6 (lower is better)
Translates to: ECTGWPGKNWWS*VPRVFSYLTRT
Trigger: AGTGCGGGTGAGGTAGGAGAAGACTCTCGGCACGCAGGACCACCAGTTCTTCCCAGGCCATCCAGTACATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CCA 72 bp AGCGGCTCTCAGAAGTCACCAGATCCGTGTCACTGTTaGCCCGCTGTAGGGCCATGTTCTCGGGCATTGAGT +
Preference number: 6 (lower is better)
Translates to: SGSQKSPDPCHC*PAVGPCSRALS
Trigger: ACTCAATGCCCGAGAACATGGCCCTACAGCGGGCCAACAGTGACACGGATCTGGTGACTTCTGAGAGCCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087659.11
ENSMUST00000097741.3
ENSMUST00000120904.8
CDS CCA 72 bp TGCCCAGGTCTCCATTCACAGTGTGGACTCCGAGGATaGTGCCGACAGCCTCTGGAGAAGCATCTTCGTGAG +
Preference number: 6 (lower is better)
Translates to: CPGLHSQCGLRG*CRQPLEKHLRE
Trigger: CTCACGAAGATGCTTCTCCAGAGGCTGTCGGCACCATCCTCGGAGTCCACACTGTGAATGGAGACCTGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CCA 72 bp ATGATACGGGGGAGCCACGCGGGGACTGACAGTAGCTaGGGTGGAGTAAGGCATGAGGAGGCACATATGACA +
Preference number: 6 (lower is better)
Translates to: MIRGSHAGTDSS*GGVRHEEAHMT
Trigger: TGTCATATGTGCCTCCTCATGCCTTACTCCACCCCAGCTACTGTCAGTCCCCGCGTGGCTCCCCCGTATCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CAA 90 bp CATGGTTCTGCGGATGCTCTGATAACGTCGGTTCAGCTGCTCCATTaGCTGTATGGAGTTAGATCGCTGCAGGACCTGTGGGGCAGGGGG +
Preference number: 6 (lower is better)
Translates to: HGSADALITSVQLLH*LYGVRSLQDLWGRG
Trigger: CCCCCTGCCCCACAGGTCCTGCAGCGATCTAACTCCATACAGCAAATGGAGCAGCTGAACCGACGTTATCAGAGCATCCGCAGAACCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CCA 72 bp GTACTGCGGCCTACTGACCGTATTGAATGTACTGGATaGCCTGGGAAGAACTGGTGGTCCTGCGTGCCGAGA +
Preference number: 6 (lower is better)
Translates to: VLRPTDRIECTG*PGKNWWSCVPR
Trigger: TCTCGGCACGCAGGACCACCAGTTCTTCCCAGGCCATCCAGTACATTCAATACGGTCAGTAGGCCGCAGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS TCA 72 bp GGCTCCCATCATCAATTCTCGACGCCCTGCTGCACATaGTCAAGCCTCCCTCCTCCTCCAAAGAAGATGGGT +
Preference number: 6 (lower is better)
Translates to: GSHHQFSTPCCT*SSLPPPPKKMG
Trigger: ACCCATCTTCTTTGGAGGAGGAGGGAGGCTTGATCATGTGCAGCAGGGCGTCGAGAATTGATGATGGGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS TCA 72 bp TGGGCCTACTGCTCTGAAGTGGGAGCCGAGGATCAATaGACGTGGTGGTCCGGGAGTTGTGGTCGACAAAAA +
Preference number: 6 (lower is better)
Translates to: WAYCSEVGAEDQ*TWWSGSCGRQK
Trigger: TTTTTGTCGACCACAACTCCCGGACCACCACGTTCATTGATCCTCGGCTCCCACTTCAGAGCAGTAGGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS GCA 72 bp GCGGCTCCCTCCAGATGTGTCAGAAGCTCCTGCATCTaGACCACTTGTGGGCTGATCTACTTCTTGAGAGCT +
Preference number: 6 (lower is better)
Translates to: AAPSRCVRSSCI*TTCGLIYFLRA
Trigger: AGCTCTCAAGAAGTAGATCAGCCCACAAGTGGTGCAGATGCAGGAGCTTCTGACACATCTGGAGGGAGCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS GCA 72 bp AGCTCTGCGGCTCCCTCCAGATGTGTCAGAAGCTCCTaGATCTGCACCACTTGTGGGCTGATCTACTTCTTG +
Preference number: 6 (lower is better)
Translates to: SSAAPSRCVRSS*ICTTCGLIYFL
Trigger: CAAGAAGTAGATCAGCCCACAAGTGGTGCAGATGCAGGAGCTTCTGACACATCTGGAGGGAGCCGCAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CCA 72 bp CTGGAGGTTCTCTGGGCTCAGTGTGTACCGCATCTGTaGATTTCGACGCCGCACAAAAAGCAAATGCTCCCG +
Preference number: 6 (lower is better)
Translates to: LEVLWAQCVPHL*ISTPHKKQMLP
Trigger: CGGGAGCATTTGCTTTTTGTGCGGCGTCGAAATCCACAGATGCGGTACACACTGAGCCCAGAGAACCTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000087659.11
ENSMUST00000097741.3
ENSMUST00000120904.8
CDS CCA 72 bp ATGAACCAATGCACTTGTGGGCCTACTGCTCTGAAGTaGGAGCCGAGGATCAATGAACGTGGTGGTCCGGGA +
Preference number: 6 (lower is better)
Translates to: MNQCTCGPTALK*EPRINERGGPG
Trigger: TCCCGGACCACCACGTTCATTGATCCTCGGCTCCCACTTCAGAGCAGTAGGCCCACAAGTGCATTGGTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CCA 72 bp GCCTCGTCAGGTGTTGTCGATGAACCAATGCACTTGTaGGCCTACTGCTCTGAAGTGGGAGCCGAGGATCAA +
Preference number: 6 (lower is better)
Translates to: ASSGVVDEPMHL*AYCSEVGAEDQ
Trigger: TTGATCCTCGGCTCCCACTTCAGAGCAGTAGGCCCACAAGTGCATTGGTTCATCGACAACACCTGACGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CCA 72 bp CGTATTGAATGTACTGGATGGCCTGGGAAGAACTGGTaGTCCTGCGTGCCGAGAGTCTTCTCCTACCTCACC +
Preference number: 6 (lower is better)
Translates to: RIECTGWPGKNW*SCVPRVFSYLT
Trigger: GGTGAGGTAGGAGAAGACTCTCGGCACGCAGGACCACCAGTTCTTCCCAGGCCATCCAGTACATTCAATACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CCA 72 bp GACCGTATTGAATGTACTGGATGGCCTGGGAAGAACTaGTGGTCCTGCGTGCCGAGAGTCTTCTCCTACCTC +
Preference number: 6 (lower is better)
Translates to: DRIECTGWPGKN*WSCVPRVFSYL
Trigger: GAGGTAGGAGAAGACTCTCGGCACGCAGGACCACCAGTTCTTCCCAGGCCATCCAGTACATTCAATACGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CAA 72 bp GTTGCCTCGTCAGGTGTTGTCGATGAACCAATGCACTaGTGGGCCTACTGCTCTGAAGTGGGAGCCGAGGAT +
Preference number: 6 (lower is better)
Translates to: VASSGVVDEPMH*WAYCSEVGAED
Trigger: ATCCTCGGCTCCCACTTCAGAGCAGTAGGCCCACAAGTGCATTGGTTCATCGACAACACCTGACGAGGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS TCA 72 bp TCGGACACTGGCCCATTAGCACAGATAGTACTGTCATaGTGGCTGCCTGGCATATCCTCCTCATCGGAAGGG +
Preference number: 6 (lower is better)
Translates to: SDTGPLAQIVLS*WLPGISSSSEG
Trigger: CCCTTCCGATGAGGAGGATATGCCAGGCAGCCATCATGACAGTACTATCTGTGCTAATGGGCCAGTGTCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS GCA 72 bp TTGGTGGTGTTGCTGATGATAGTGGACCTTCTCTCCTaGCCATGGTGGGCGCAGGTAGGAAAACTGCTCTTC +
Preference number: 6 (lower is better)
Translates to: LVVLLMIVDLLS*PWWAQVGKLLF
Trigger: GAAGAGCAGTTTTCCTACCTGCGCCCACCATGGGCAGGAGAGAAGGTCCACTATCATCAGCAACACCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087659.11
ENSMUST00000097741.3
ENSMUST00000120904.8
CDS GCA 72 bp GTGTCGATCTCCAGGGTAGAGCTAGTCCTGAAAGAATaGTTAGGGGTGCCATCAGCAACACTGTCCTCGGAC +
Preference number: 6 (lower is better)
Translates to: VSISRVELVLKE*LGVPSATLSSD
Trigger: GTCCGAGGACAGTGTTGCTGATGGCACCCCTAAGCATTCTTTCAGGACTAGCTCTACCCTGGAGATCGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CCA 72 bp GTGTTGCTGATGATAGTGGACCTTCTCTCCTGCCCATaGTGGGCGCAGGTAGGAAAACTGCTCTTCTTCCCT +
Preference number: 6 (lower is better)
Translates to: VLLMIVDLLSCP*WAQVGKLLFFP
Trigger: AGGGAAGAAGAGCAGTTTTCCTACCTGCGCCCACCATGGGCAGGAGAGAAGGTCCACTATCATCAGCAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087659.11
ENSMUST00000097741.3
ENSMUST00000120904.8
CDS CCA 72 bp CACTTTAAACTGGAGGTACCCACTCACGTGGTCAGCTaGGAGCCGTCTGCCAAGGTTGTAGCTGAGCATTTG +
Preference number: 6 (lower is better)
Translates to: HFKLEVPTHVVS*EPSAKVVAEHL
Trigger: CAAATGCTCAGCTACAACCTTGGCAGACGGCTCCCAGCTGACCACGTGAGTGGGTACCTCCAGTTTAAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CAA 72 bp GCTACACAATTCAGTGCTACCCTGGTCTGCACTGGGTaGAGGCTCCAGGTTGGCTTCATTTTCATCAGGGGC +
Preference number: 6 (lower is better)
Translates to: ATQFSATLVCTG*RLQVGFIFIRG
Trigger: GCCCCTGATGAAAATGAAGCCAACCTGGAGCCTCAACCCAGTGCAGACCAGGGTAGCACTGAATTGTGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CAA 72 bp GCGGATGCTCTGATAACGTCGGTTCAGCTGCTCCATTaGCTGTATGGAGTTAGATCGCTGCAGGACCTGTGG +
Preference number: 6 (lower is better)
Translates to: ADALITSVQLLH*LYGVRSLQDLW
Trigger: CCACAGGTCCTGCAGCGATCTAACTCCATACAGCAAATGGAGCAGCTGAACCGACGTTATCAGAGCATCCGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CAA 72 bp GGAACCATGTCCTGGTACTGCGGCCTACTGACCGTATaGAATGTACTGGATGGCCTGGGAAGAACTGGTGGT +
Preference number: 6 (lower is better)
Translates to: GTMSWYCGLLTV*NVLDGLGRTGG
Trigger: ACCACCAGTTCTTCCCAGGCCATCCAGTACATTCAATACGGTCAGTAGGCCGCAGTACCAGGACATGGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CAA 90 bp TGGGTTGAGGCTCCAGGTTGGCTTCATTTTCATCAGGGGCTGTACTaGATGGCAAGGAGCCATCTGCAACCTCTGGAAGATTCTCCAGCC +
Preference number: 6 (lower is better)
Translates to: WVEAPGWLHFHQGLY*MARSHLQPLEDSPA
Trigger: GGCTGGAGAATCTTCCAGAGGTTGCAGATGGCTCCTTGCCATCAAGTACAGCCCCTGATGAAAATGAAGCCAACCTGGAGCCTCAACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS TCA 72 bp CTACACAATTCAGTGCTACCCTGGTCTGCACTGGGTTaGGGCTCCAGGTTGGCTTCATTTTCATCAGGGGCT +
Preference number: 6 (lower is better)
Translates to: LHNSVLPWSALG*GSRLASFSSGA
Trigger: AGCCCCTGATGAAAATGAAGCCAACCTGGAGCCTCAACCCAGTGCAGACCAGGGTAGCACTGAATTGTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS TCA 72 bp GCCCACTGTAATCCAACCCTTCCTCCCCGACAAAGGTaGCGTACAGTTTATTCCTCTGCAGGTCCTTTCTGG +
Preference number: 6 (lower is better)
Translates to: AHCNPTLPPRQR*RTVYSSAGPFW
Trigger: CCAGAAAGGACCTGCAGAGGAATAAACTGTACGTCACCTTTGTCGGGGAGGAAGGGTTGGATTACAGTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS GCA 72 bp TGGGCTGATCTACTTCTTGAGAGCTACACAATTCAGTaGTACCCTGGTCTGCACTGGGTTGAGGCTCCAGGT +
Preference number: 6 (lower is better)
Translates to: WADLLLESYTIQ*YPGLHWVEAPG
Trigger: ACCTGGAGCCTCAACCCAGTGCAGACCAGGGTAGCACTGAATTGTGTAGCTCTCAAGAAGTAGATCAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CCA 72 bp CTTAGGGGTGCCATCAGCAACACTGTCCTCGGACACTaGCCCATTAGCACAGATAGTACTGTCATGATGGCT +
Preference number: 6 (lower is better)
Translates to: LRGAISNTVLGH*PISTDSTVMMA
Trigger: AGCCATCATGACAGTACTATCTGTGCTAATGGGCCAGTGTCCGAGGACAGTGTTGCTGATGGCACCCCTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CCA 72 bp CGCACCAATCCAGGGGTCCCTTCCGTTCGGATAAATTaGATCTTCTCCCTGAGTGAGTGGTTTCTGGCAAGA +
Preference number: 6 (lower is better)
Translates to: RTNPGVPSVRIN*IFSLSEWFLAR
Trigger: TCTTGCCAGAAACCACTCACTCAGGGAGAAGATCCAATTTATCCGAACGGAAGGGACCCCTGGATTGGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CAA 90 bp GTCAGAAGCTCCTGCATCTGCACCACTTGTGGGCTGATCTACTTCTaGAGAGCTACACAATTCAGTGCTACCCTGGTCTGCACTGGGTTG +
Preference number: 6 (lower is better)
Translates to: VRSSCICTTCGLIYF*RATQFSATLVCTGL
Trigger: CAACCCAGTGCAGACCAGGGTAGCACTGAATTGTGTAGCTCTCAAGAAGTAGATCAGCCCACAAGTGGTGCAGATGCAGGAGCTTCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CAA 90 bp TGCGGCTCCCTCCAGATGTGTCAGAAGCTCCTGCATCTGCACCACTaGTGGGCTGATCTACTTCTTGAGAGCTACACAATTCAGTGCTAC +
Preference number: 6 (lower is better)
Translates to: CGSLQMCQKLLHLHH*WADLLLESYTIQCY
Trigger: GTAGCACTGAATTGTGTAGCTCTCAAGAAGTAGATCAGCCCACAAGTGGTGCAGATGCAGGAGCTTCTGACACATCTGGAGGGAGCCGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS TCA 72 bp TCATTCTCCACAGGGTTGTCATCCTCTGGTTTGGTCTaGGATGTCAGGCTCCCATCATCAATTCTCGACGCC +
Preference number: 6 (lower is better)
Translates to: SFSTGLSSSGLV*DVRLPSSILDA
Trigger: GGCGTCGAGAATTGATGATGGGAGCCTGACATCTCAGACCAAACCAGAGGATGACAACCCTGTGGAGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CCA 72 bp GAGAGCTACACAATTCAGTGCTACCCTGGTCTGCACTaGGTTGAGGCTCCAGGTTGGCTTCATTTTCATCAG +
Preference number: 6 (lower is better)
Translates to: ESYTIQCYPGLH*VEAPGWLHFHQ
Trigger: CTGATGAAAATGAAGCCAACCTGGAGCCTCAACCCAGTGCAGACCAGGGTAGCACTGAATTGTGTAGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CCA 72 bp GTTCCAGCTCTCTCGCATCAAAGACAGACACTAGCCTaGCATCTACTACCTCGTAGAAACCACGAACTAGGC +
Preference number: 6 (lower is better)
Translates to: VPALSHQRQTLA*HLLPRRNHELG
Trigger: GCCTAGTTCGTGGTTTCTACGAGGTAGTAGATGCCAGGCTAGTGTCTGTCTTTGATGCGAGAGAGCTGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CAA 72 bp GAGTATTTCTCTCTGTGCCAGATCGGATTGGTGGTGTaGCTGATGATAGTGGACCTTCTCTCCTGCCCATGG +
Preference number: 6 (lower is better)
Translates to: EYFSLCQIGLVV*LMIVDLLSCPW
Trigger: CCATGGGCAGGAGAGAAGGTCCACTATCATCAGCAACACCACCAATCCGATCTGGCACAGAGAGAAATACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087659.11
ENSMUST00000097741.3
ENSMUST00000120904.8
CDS CAA 72 bp TCCTGCATCTGCACCACTTGTGGGCTGATCTACTTCTaGAGAGCTACACAATTCAGTGCTACCCTGGTCTGC +
Preference number: 6 (lower is better)
Translates to: SCICTTCGLIYF*RATQFSATLVC
Trigger: GCAGACCAGGGTAGCACTGAATTGTGTAGCTCTCAAGAAGTAGATCAGCCCACAAGTGGTGCAGATGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS TCA 72 bp GAACATCCCTTTCTTGAGCCCAACTGCCCTGAGATCTaGCAATGTGAAGCTGACGAGTTTCCTAGAGTGCAG +
Preference number: 6 (lower is better)
Translates to: EHPFLEPNCPEI*QCEADEFPRVQ
Trigger: CTGCACTCTAGGAAACTCGTCAGCTTCACATTGTCAGATCTCAGGGCAGTTGGGCTCAAGAAAGGGATGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087659.11
ENSMUST00000097741.3
ENSMUST00000120904.8
CDS TCA 72 bp AGGATGGTGCCGACAGCCTCTGGAGAAGCATCTTCGTaGGCAGAAGATGTAACTTCCACTTTAAACTGGAGG +
Preference number: 6 (lower is better)
Translates to: RMVPTASGEASS*AEDVTSTLNWR
Trigger: CCTCCAGTTTAAAGTGGAAGTTACATCTTCTGCTCACGAAGATGCTTCTCCAGAGGCTGTCGGCACCATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS TCA 72 bp CTCCAGGTTGGCTTCATTTTCATCAGGGGCTGTACTTaGTGGCAAGGAGCCATCTGCAACCTCTGGAAGATT +
Preference number: 6 (lower is better)
Translates to: LQVGFIFIRGCT*WQGAICNLWKI
Trigger: AATCTTCCAGAGGTTGCAGATGGCTCCTTGCCATCAAGTACAGCCCCTGATGAAAATGAAGCCAACCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS GCA 72 bp TTCTTGAGAGCTACACAATTCAGTGCTACCCTGGTCTaGACTGGGTTGAGGCTCCAGGTTGGCTTCATTTTC +
Preference number: 6 (lower is better)
Translates to: FLRATQFSATLV*TGLRLQVGFIF
Trigger: GAAAATGAAGCCAACCTGGAGCCTCAACCCAGTGCAGACCAGGGTAGCACTGAATTGTGTAGCTCTCAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CAA 90 bp TTGTCATGGTACCCGCCTCTGTATTCAGTGTTGTTTCTCCAGTCATaGAGATCTATCTCAGCTGTGCCGGCAATGACCAGTTCCAGCTCT +
Preference number: 6 (lower is better)
Translates to: LSWYPPLYSVLFLQS*RSISAVPAMTSSSS
Trigger: AGAGCTGGAACTGGTCATTGCCGGCACAGCTGAGATAGATCTCAATGACTGGAGAAACAACACTGAATACAGAGGCGGGTACCATGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CCA 72 bp CAGATGTGTCAGAAGCTCCTGCATCTGCACCACTTGTaGGCTGATCTACTTCTTGAGAGCTACACAATTCAG +
Preference number: 6 (lower is better)
Translates to: QMCQKLLHLHHL*ADLLLESYTIQ
Trigger: CTGAATTGTGTAGCTCTCAAGAAGTAGATCAGCCCACAAGTGGTGCAGATGCAGGAGCTTCTGACACATCTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CAA 72 bp CTCCAGATGTGTCAGAAGCTCCTGCATCTGCACCACTaGTGGGCTGATCTACTTCTTGAGAGCTACACAATT +
Preference number: 6 (lower is better)
Translates to: LQMCQKLLHLHH*WADLLLESYTI
Trigger: AATTGTGTAGCTCTCAAGAAGTAGATCAGCCCACAAGTGGTGCAGATGCAGGAGCTTCTGACACATCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CAA 72 bp TACCCGCCTCTGTATTCAGTGTTGTTTCTCCAGTCATaGAGATCTATCTCAGCTGTGCCGGCAATGACCAGT +
Preference number: 6 (lower is better)
Translates to: YPPLYSVLFLQS*RSISAVPAMTS
Trigger: ACTGGTCATTGCCGGCACAGCTGAGATAGATCTCAATGACTGGAGAAACAACACTGAATACAGAGGCGGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CAA 72 bp CATGAAGTAGGGCCCAGGCTCAATTCGCCATACAATTaGTCCTTTTTGGGTTCCAGTCACACCCCTGTTTTT +
Preference number: 6 (lower is better)
Translates to: HEVGPRLNSPYN*SFLGSSHTPVF
Trigger: AAAAACAGGGGTGTGACTGGAACCCAAAAAGGACAAATTGTATGGCGAATTGAGCCTGGGCCCTACTTCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000087659.11
ENSMUST00000097741.3
ENSMUST00000120904.8
CDS TCA 72 bp GCCCAAGTCTTGCTGAAACTCATGGTCTTCTTCGTCTaGGTCAATATGAAGCATCGCATTGAGTCTTGTGTC +
Preference number: 6 (lower is better)
Translates to: AQVLLKLMVFFV*VNMKHRIESCV
Trigger: GACACAAGACTCAATGCGATGCTTCATATTGACTCAGACGAAGAAGACCATGAGTTTCAGCAAGACTTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS TCA 72 bp GGTCTTCTTCGTCTGAGTCAATATGAAGCATCGCATTaGGTCTTGTGTCAGTGGGAAAACTACTCCTCAGTT +
Preference number: 6 (lower is better)
Translates to: GLLRLSQYEASH*VLCQWENYSSV
Trigger: AACTGAGGAGTAGTTTTCCCACTGACACAAGACTCAATGCGATGCTTCATATTGACTCAGACGAAGAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8
CDS CCA 72 bp AGTCACACCCCTGTTTTTAGAGTCCCAGAAGTTGGCTaGAGAATTCTCATCTATGTGATAGAGTCCTATCCA +
Preference number: 6 (lower is better)
Translates to: SHTPVFRVPEVG*RILIYVIESYP
Trigger: TGGATAGGACTCTATCACATAGATGAGAATTCTCCAGCCAACTTCTGGGACTCTAAAAACAGGGGTGTGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000087659.11
ENSMUST00000097741.3
ENSMUST00000120904.8
CDS CCA 72 bp GGAACCATTCATGATGATTGTCTACAAAGGCAGACATaGGACTTATTTGCACTGTATATGTGTCATTGGCTG +
Preference number: 6 (lower is better)
Translates to: GTIHDDCLQRQT*DLFALYMCHWL
Trigger: CAGCCAATGACACATATACAGTGCAAATAAGTCCCATGTCTGCCTTTGTAGACAATCATCATGAATGGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087659.11
ENSMUST00000120904.8