Pregenerated sensors for HEBP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042770Ensembl transcript IDs: ENSMUST00000045855.9
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | CCCTCCCGCCCCTTGACCCTAAGTCAGGGGACACAGTaGCACCCTTCCAGGACGTTCTCAGTTCATCAAGTG | + |
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Preference number: 3 (lower is better) Translates to: PSRPLTLSQGTQ*HPSRTFSVHQV Trigger: CACTTGATGAACTGAGAACGTCCTGGAAGGGTGCCACTGTGTCCCCTGACTTAGGGTCAAGGGGCGGGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS-3UTR TCA 90 bp | ACCCTCCCGCCCCTTGACCCTAAGTCAGGGGACACAGTGGCACCCTTCCAGGACGCGTGGAATAGACAGTaGTGCCCTCCCGTTCCTCGA | + |
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Preference number: 4 (lower is better) Translates to: TLPPLDPKSGDTVAPFQDAWNRQ*CPPVPR Trigger: TCGAGGAACGGGAGGGCATCACTGTCTATTCCACGC...GTCCTGGAAGGGTGCCACTGTGTCCCCTGACTTAGGGTCAAGGGGCGGGAGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS-3UTR GCA 90 bp | ACCCTCCCGCCCCTTGACCCTAAGTCAGGGGACACAGTGGCACCCTTCCAGGACCCGGTGCTTAGAACCTaGCAAGGCCACGTTTCCACG | + |
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Preference number: 4 (lower is better) Translates to: TLPPLDPKSGDTVAPFQDPVLRT*QGHVST Trigger: CGTGGAAACGTGGCCTTGGCAGGTTCTAAGCACCGG...GTCCTGGAAGGGTGCCACTGTGTCCCCTGACTTAGGGTCAAGGGGCGGGAGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS-3UTR TCA 90 bp | ACCCTCCCGCCCCTTGACCCTAAGTCAGGGGACACAGTGGCACCCTTCCAGGACCACGCTCCCGAACAGTaGGTTCCTGATCATGCCCAA | + |
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Preference number: 4 (lower is better) Translates to: TLPPLDPKSGDTVAPFQDHAPEQ*VPDHAQ Trigger: TTGGGCATGATCAGGAACTCACTGTTCGGGAGCGTG...GTCCTGGAAGGGTGCCACTGTGTCCCCTGACTTAGGGTCAAGGGGCGGGAGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS-3UTR CCA 90 bp | ACCCTCCCGCCCCTTGACCCTAAGTCAGGGGACACAGTGGCACCCTTCCAGGACATCACTGGGGGCCGGTaGGCTGCCTTGAAATTGGTT | + |
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Preference number: 4 (lower is better) Translates to: TLPPLDPKSGDTVAPFQDITGGR*AALKLV Trigger: AACCAATTTCAAGGCAGCCCACCGGCCCCCAGTGAT...GTCCTGGAAGGGTGCCACTGTGTCCCCTGACTTAGGGTCAAGGGGCGGGAGGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS-3UTR CCA 90 bp | CGCCCCTTGACCCTAAGTCAGGGGACACAGTGGCACCCTTCCAGGACGTTCTCAACCCTGGTAGGTCGCTaGTGTGCCCTCCAGTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: RPLTLSQGTQWHPSRTFSTLVGR*CALQCG Trigger: ACCACACTGGAGGGCACACCAGCGACCTACCAGGGT...TGAGAACGTCCTGGAAGGGTGCCACTGTGTCCCCTGACTTAGGGTCAAGGGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS-3UTR CCA 90 bp | ACCCTCCCGCCCCTTGACCCTAAGTCAGGGGACACAGTGGCACCCTTCCAGGACGAGAGCCTCATCCACTaGCTTGTCTGTCACTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: TLPPLDPKSGDTVAPFQDESLIH*LVCHFH Trigger: GTGGAAGTGACAGACAAGCCAGTGGATGAGGCTCTC...GTCCTGGAAGGGTGCCACTGTGTCCCCTGACTTAGGGTCAAGGGGCGGGAGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS-3UTR CCA 90 bp | CGCCCCTTGACCCTAAGTCAGGGGACACAGTGGCACCCTTCCAGGACGTTCTCAGTCCATAGGGCTTCATaGGAGGGTCATATCCGGCAC | + |
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Preference number: 4 (lower is better) Translates to: RPLTLSQGTQWHPSRTFSVHRAS*EGHIRH Trigger: GTGCCGGATATGACCCTCCCATGAAGCCCTATGGAC...TGAGAACGTCCTGGAAGGGTGCCACTGTGTCCCCTGACTTAGGGTCAAGGGGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS-3UTR CCA 90 bp | ACCCTCCCGCCCCTTGACCCTAAGTCAGGGGACACAGTGGCACCCTTCCAGGACCATAGTCTGCTTCCTTaGCATAGCCTCCAAATTGCG | + |
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Preference number: 4 (lower is better) Translates to: TLPPLDPKSGDTVAPFQDHSLLP*HSLQIA Trigger: CGCAATTTGGAGGCTATGCCAAGGAAGCAGACTATG...GTCCTGGAAGGGTGCCACTGTGTCCCCTGACTTAGGGTCAAGGGGCGGGAGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS-3UTR CCA 90 bp | TTGACCCTAAGTCAGGGGACACAGTGGCACCCTTCCAGGACGTTCTCAGTTCATTGGTCCGTAGCTGGGTaGCATGAGCAACATAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: LTLSQGTQWHPSRTFSVHWSVAG*HEQHSL Trigger: CAGACTATGTTGCTCATGCCACCCAGCTACGGACCA...ATGAACTGAGAACGTCCTGGAAGGGTGCCACTGTGTCCCCTGACTTAGGGTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS-3UTR CCA 90 bp | TTGACCCTAAGTCAGGGGACACAGTGGCACCCTTCCAGGACGTTCTCAGTTCATCGACTCCTTTGTCATTaGTGCCACCCACATACTTCA | + |
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Preference number: 4 (lower is better) Translates to: LTLSQGTQWHPSRTFSVHRLLCH*CHPHTS Trigger: TGAAGTATGTGGGTGGCACCAATGACAAAGGAGTCG...ATGAACTGAGAACGTCCTGGAAGGGTGCCACTGTGTCCCCTGACTTAGGGTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS-3UTR CCA 90 bp | TTGACCCTAAGTCAGGGGACACAGTGGCACCCTTCCAGGACGTTCTCAGTTCATGGGAGCCATCTTCATTaGGAAACACGGCAAAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: LTLSQGTQWHPSRTFSVHGSHLH*ETRQKR Trigger: TCTCTTTTGCCGTGTTTCCCAATGAAGATGGCTCCC...ATGAACTGAGAACGTCCTGGAAGGGTGCCACTGTGTCCCCTGACTTAGGGTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| 3UTR CAA 72 bp | CCAGAACTTTCTAACTCAAGAATGATGCTGCCAATCTaGGCTTATTTCAGAAAATCAGCAGTGAGGGATTTT | + |
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Preference number: 4 (lower is better) Translates to: PELSNSRMMLPI*AYFRKSAVRDF Trigger: AAAATCCCTCACTGCTGATTTTCTGAAATAAGCCAAGATTGGCAGCATCATTCTTGAGTTAGAAAGTTCTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS-3UTR CAA 90 bp | CCCTCCCGCCCCTTGACCCTAAGTCAGGGGACACAGTGGCACCCTTCCAGGACGCCGACTCCTTTGTCATaGGTGCCACCCACATACTTC | + |
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Preference number: 5 (lower is better) Translates to: PSRPLTLSQGTQWHPSRTPTPLS*VPPTYF Trigger: GAAGTATGTGGGTGGCACCAATGACAAAGGAGTCGG...CGTCCTGGAAGGGTGCCACTGTGTCCCCTGACTTAGGGTCAAGGGGCGGGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS CCA 90 bp | GCCCTCCCGTTCCTCGATCTTCACACTCTCATCACTGGGGGCCGGTaGGCTGCCTTGAAATTGGTTCGGAATCCGGAACCAGACTTTCAG | + |
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Preference number: 5 (lower is better) Translates to: ALPFLDLHTLITGGR*AALKLVRNPEPDFQ Trigger: CTGAAAGTCTGGTTCCGGATTCCGAACCAATTTCAAGGCAGCCCACCGGCCCCCAGTGATGAGAGTGTGAAGATCGAGGAACGGGAGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS GCA 90 bp | CTTCACAGGCTCTTTCCTCATAGGAGACATCTTCCTTGCCCCCGGTaGTTAGAACCTGCCAAGGCCACGTTTCCACGCTCCCGAACAGTG | + |
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Preference number: 5 (lower is better) Translates to: LHRLFPHRRHLPCPR*LEPAKATFPRSRTV Trigger: CACTGTTCGGGAGCGTGGAAACGTGGCCTTGGCAGGTTCTAAGCACCGGGGGCAAGGAAGATGTCTCCTATGAGGAAAGAGCCTGTGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS CCA 90 bp | CCTGGTAGGTCGCTGGTGTGCCCTCCAGTGTGGTCCGTAGCTGGGTaGCATGAGCAACATAGTCTGCTTCCTTGGCATAGCCTCCAAATT | + |
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Preference number: 5 (lower is better) Translates to: PGRSLVCPPVWSVAG*HEQHSLLPWHSLQI Trigger: AATTTGGAGGCTATGCCAAGGAAGCAGACTATGTTGCTCATGCCACCCAGCTACGGACCACACTGGAGGGCACACCAGCGACCTACCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS-3UTR CAA 90 bp | CGCCCCTTGACCCTAAGTCAGGGGACACAGTGGCACCCTTCCAGGACGTTCTCAAGGGAGCCATCTTCATaGGGAAACACGGCAAAAGAG | + |
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Preference number: 5 (lower is better) Translates to: RPLTLSQGTQWHPSRTFSREPSS*GNTAKE Trigger: CTCTTTTGCCGTGTTTCCCAATGAAGATGGCTCCCT...TGAGAACGTCCTGGAAGGGTGCCACTGTGTCCCCTGACTTAGGGTCAAGGGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS GCA 90 bp | CATATCCGGCACAGTAATAGACATCACCCTGGTAGGTCGCTGGTGTaGCCTCCAGTGTGGTCCGTAGCTGGGTGGCATGAGCAACATAGT | + |
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Preference number: 5 (lower is better) Translates to: HIRHSNRHHPGRSLV*PPVWSVAGWHEQHS Trigger: ACTATGTTGCTCATGCCACCCAGCTACGGACCACACTGGAGGGCACACCAGCGACCTACCAGGGTGATGTCTATTACTGTGCCGGATATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS CCA 90 bp | AGTAATAGACATCACCCTGGTAGGTCGCTGGTGTGCCCTCCAGTGTaGTCCGTAGCTGGGTGGCATGAGCAACATAGTCTGCTTCCTTGG | + |
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Preference number: 5 (lower is better) Translates to: SNRHHPGRSLVCPPV*SVAGWHEQHSLLPW Trigger: CCAAGGAAGCAGACTATGTTGCTCATGCCACCCAGCTACGGACCACACTGGAGGGCACACCAGCGACCTACCAGGGTGATGTCTATTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS TCA 90 bp | TACCCATGCCGACTCCTTTGTCATTGGTGCCACCCACATACTTCATaGTCTTGGGCATCGCTTCCCGGAGAGCCTCATCCACTGGCTTGT | + |
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Preference number: 5 (lower is better) Translates to: YPCRLLCHWCHPHTS*SWASLPGEPHPLAC Trigger: ACAAGCCAGTGGATGAGGCTCTCCGGGAAGCGATGCCCAAGATCATGAAGTATGTGGGTGGCACCAATGACAAAGGAGTCGGCATGGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS GCA 90 bp | CCCGTTCCTCGATCTTCACACTCTCATCACTGGGGGCCGGTGGGCTaGCTTGAAATTGGTTCGGAATCCGGAACCAGACTTTCAGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: PVPRSSHSHHWGPVG*LEIGSESGTRLSVS Trigger: AGAAACTGAAAGTCTGGTTCCGGATTCCGAACCAATTTCAAGGCAGCCCACCGGCCCCCAGTGATGAGAGTGTGAAGATCGAGGAACGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS CCA 90 bp | ATGCCTTCACAAGCCAGACCTCGTTACGGCGTCCATAGGGCTTCATaGGAGGGTCATATCCGGCACAGTAATAGACATCACCCTGGTAGG | + |
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Preference number: 5 (lower is better) Translates to: MPSQARPRYGVHRAS*EGHIRHSNRHHPGR Trigger: CCTACCAGGGTGATGTCTATTACTGTGCCGGATATGACCCTCCCATGAAGCCCTATGGACGCCGTAACGAGGTCTGGCTTGTGAAGGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS-3UTR CAA 90 bp | TTGACCCTAAGTCAGGGGACACAGTGGCACCCTTCCAGGACGTTCTCAGTTCATTGGGCTGCCTTGAAATaGGTTCGGAATCCGGAACCA | + |
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Preference number: 5 (lower is better) Translates to: LTLSQGTQWHPSRTFSVHWAALK*VRNPEP Trigger: TGGTTCCGGATTCCGAACCAATTTCAAGGCAGCCCA...ATGAACTGAGAACGTCCTGGAAGGGTGCCACTGTGTCCCCTGACTTAGGGTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS TCA 90 bp | TCCTCGATCTTCACACTCTCATCACTGGGGGCCGGTGGGCTGCCTTaGAATTGGTTCGGAATCCGGAACCAGACTTTCAGTTTCTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: SSIFTLSSLGAGGLP*NWFGIRNQTFSFFC Trigger: ACAGAAGAAACTGAAAGTCTGGTTCCGGATTCCGAACCAATTTCAAGGCAGCCCACCGGCCCCCAGTGATGAGAGTGTGAAGATCGAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS CCA 90 bp | ATACTTCATGATCTTGGGCATCGCTTCCCGGAGAGCCTCATCCACTaGCTTGTCTGTCACTTCCACAGTAGCAAACTTGCCCCCTTCACA | + |
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Preference number: 5 (lower is better) Translates to: ILHDLGHRFPESLIH*LVCHFHSSKLAPFT Trigger: TGTGAAGGGGGCAAGTTTGCTACTGTGGAAGTGACAGACAAGCCAGTGGATGAGGCTCTCCGGGAAGCGATGCCCAAGATCATGAAGTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS CCA 90 bp | TCCGGAACCAGACTTTCAGTTTCTTCTGTAGGGAGCCATCTTCATTaGGAAACACGGCAAAAGAGACAGGGACTGTCATACCCATGCCGA | + |
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Preference number: 5 (lower is better) Translates to: SGTRLSVSSVGSHLH*ETRQKRQGLSYPCR Trigger: TCGGCATGGGTATGACAGTCCCTGTCTCTTTTGCCGTGTTTCCCAATGAAGATGGCTCCCTACAGAAGAAACTGAAAGTCTGGTTCCGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS CCA 72 bp | CATCACCCTGGTAGGTCGCTGGTGTGCCCTCCAGTGTaGTCCGTAGCTGGGTGGCATGAGCAACATAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: HHPGRSLVCPPV*SVAGWHEQHSL Trigger: CAGACTATGTTGCTCATGCCACCCAGCTACGGACCACACTGGAGGGCACACCAGCGACCTACCAGGGTGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS GCA 72 bp | CACAGTAATAGACATCACCCTGGTAGGTCGCTGGTGTaGCCTCCAGTGTGGTCCGTAGCTGGGTGGCATGAG | + |
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Preference number: 6 (lower is better) Translates to: HSNRHHPGRSLV*PPVWSVAGWHE Trigger: CTCATGCCACCCAGCTACGGACCACACTGGAGGGCACACCAGCGACCTACCAGGGTGATGTCTATTACTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS CCA 72 bp | TGCCCTCCCGTTCCTCGATCTTCACACTCTCATCACTaGGGGCCGGTGGGCTGCCTTGAAATTGGTTCGGAA | + |
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Preference number: 6 (lower is better) Translates to: CPPVPRSSHSHH*GPVGCLEIGSE Trigger: TTCCGAACCAATTTCAAGGCAGCCCACCGGCCCCCAGTGATGAGAGTGTGAAGATCGAGGAACGGGAGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS GCA 72 bp | CGATCTTCACACTCTCATCACTGGGGGCCGGTGGGCTaGCTTGAAATTGGTTCGGAATCCGGAACCAGACTT | + |
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Preference number: 6 (lower is better) Translates to: RSSHSHHWGPVG*LEIGSESGTRL Trigger: AAGTCTGGTTCCGGATTCCGAACCAATTTCAAGGCAGCCCACCGGCCCCCAGTGATGAGAGTGTGAAGATCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS CCA 72 bp | TTCCTCGATCTTCACACTCTCATCACTGGGGGCCGGTaGGCTGCCTTGAAATTGGTTCGGAATCCGGAACCA | + |
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Preference number: 6 (lower is better) Translates to: FLDLHTLITGGR*AALKLVRNPEP Trigger: TGGTTCCGGATTCCGAACCAATTTCAAGGCAGCCCACCGGCCCCCAGTGATGAGAGTGTGAAGATCGAGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS CAA 72 bp | CCTTTGTCATTGGTGCCACCCACATACTTCATGATCTaGGGCATCGCTTCCCGGAGAGCCTCATCCACTGGC | + |
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Preference number: 6 (lower is better) Translates to: PLSLVPPTYFMI*GIASRRASSTG Trigger: GCCAGTGGATGAGGCTCTCCGGGAAGCGATGCCCAAGATCATGAAGTATGTGGGTGGCACCAATGACAAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS CAA 90 bp | ATGCCGACTCCTTTGTCATTGGTGCCACCCACATACTTCATGATCTaGGGCATCGCTTCCCGGAGAGCCTCATCCACTGGCTTGTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: MPTPLSLVPPTYFMI*GIASRRASSTGLSV Trigger: GACAGACAAGCCAGTGGATGAGGCTCTCCGGGAAGCGATGCCCAAGATCATGAAGTATGTGGGTGGCACCAATGACAAAGGAGTCGGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS TCA 72 bp | CGACTCCTTTGTCATTGGTGCCACCCACATACTTCATaGTCTTGGGCATCGCTTCCCGGAGAGCCTCATCCA | + |
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Preference number: 6 (lower is better) Translates to: RLLCHWCHPHTS*SWASLPGEPHP Trigger: TGGATGAGGCTCTCCGGGAAGCGATGCCCAAGATCATGAAGTATGTGGGTGGCACCAATGACAAAGGAGTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS TCA 72 bp | TTCACACTCTCATCACTGGGGGCCGGTGGGCTGCCTTaGAATTGGTTCGGAATCCGGAACCAGACTTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: FTLSSLGAGGLP*NWFGIRNQTFS Trigger: ACTGAAAGTCTGGTTCCGGATTCCGAACCAATTTCAAGGCAGCCCACCGGCCCCCAGTGATGAGAGTGTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS GCA 72 bp | CTTCACAGGCTCTTTCCTCATAGGAGACATCTTCCTTaGCCCCGGTGCTTAGAACCTGCCAAGGCCACGTTT | + |
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Preference number: 6 (lower is better) Translates to: LHRLFPHRRHLP*PRCLEPAKATF Trigger: AAACGTGGCCTTGGCAGGTTCTAAGCACCGGGGGCAAGGAAGATGTCTCCTATGAGGAAAGAGCCTGTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS CCA 72 bp | CAAGCCAGACCTCGTTACGGCGTCCATAGGGCTTCATaGGAGGGTCATATCCGGCACAGTAATAGACATCAC | + |
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Preference number: 6 (lower is better) Translates to: QARPRYGVHRAS*EGHIRHSNRHH Trigger: GTGATGTCTATTACTGTGCCGGATATGACCCTCCCATGAAGCCCTATGGACGCCGTAACGAGGTCTGGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS CAA 90 bp | GCAAAAGAGACAGGGACTGTCATACCCATGCCGACTCCTTTGTCATaGGTGCCACCCACATACTTCATGATCTTGGGCATCGCTTCCCGG | + |
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Preference number: 6 (lower is better) Translates to: AKETGTVIPMPTPLS*VPPTYFMILGIASR Trigger: CCGGGAAGCGATGCCCAAGATCATGAAGTATGTGGGTGGCACCAATGACAAAGGAGTCGGCATGGGTATGACAGTCCCTGTCTCTTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS CAA 72 bp | ACTCTCATCACTGGGGGCCGGTGGGCTGCCTTGAAATaGGTTCGGAATCCGGAACCAGACTTTCAGTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: TLITGGRWAALK*VRNPEPDFQFL Trigger: AAGAAACTGAAAGTCTGGTTCCGGATTCCGAACCAATTTCAAGGCAGCCCACCGGCCCCCAGTGATGAGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS TCA 72 bp | CCTTGGCATAGCCTCCAAATTGCGTGGAATAGACAGTaGTGCCCTCCCGTTCCTCGATCTTCACACTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: PWHSLQIAWNRQ*CPPVPRSSHSH Trigger: ATGAGAGTGTGAAGATCGAGGAACGGGAGGGCATCACTGTCTATTCCACGCAATTTGGAGGCTATGCCAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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| CDS CAA 72 bp | AAAGAGACAGGGACTGTCATACCCATGCCGACTCCTTaGTCATTGGTGCCACCCACATACTTCATGATCTTG | + |
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Preference number: 6 (lower is better) Translates to: KETGTVIPMPTP*SLVPPTYFMIL Trigger: CAAGATCATGAAGTATGTGGGTGGCACCAATGACAAAGGAGTCGGCATGGGTATGACAGTCCCTGTCTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045855.9 |
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