Pregenerated sensors for HEATR9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018925Ensembl transcript IDs: ENSMUST00000019069.4
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCAAGGCGTTGCGTTTGGCCTGCTTGGATGCACCCTCCAGCACTCTaGACTTGGGGGAAATGCTTCCTTTGGCACCTTGTAACAGGACAA | + |
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Preference number: 5 (lower is better) Translates to: ARRCVWPAWMHPPAL*TWGKCFLWHLVTGQ Trigger: TTGTCCTGTTACAAGGTGCCAAAGGAAGCATTTCCCCCAAGTCCAGAGTGCTGGAGGGTGCATCCAAGCAGGCCAAACGCAACGCCTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CCA 90 bp | TTGAGGGTGCGCCAGTGTGTGAAGAGATCGGGCTTTTTATCTAAGTaGAGGCAAGGCGTTGCGTTTGGCCTGCTTGGATGCACCCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: LRVRQCVKRSGFLSK*RQGVAFGLLGCTLQ Trigger: CTGGAGGGTGCATCCAAGCAGGCCAAACGCAACGCCTTGCCTCCACTTAGATAAAAAGCCCGATCTCTTCACACACTGGCGCACCCTCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS GCA 90 bp | GAACACCTTTTCGTTACGGATCCCCAGGGCACCCAAAGAGATGATTaGTTCCTGACGGTCACTGACATCTGGGCTCATCAGTTGCGCCTC | + |
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Preference number: 5 (lower is better) Translates to: EHLFVTDPQGTQRDD*FLTVTDIWAHQLRL Trigger: GAGGCGCAACTGATGAGCCCAGATGTCAGTGACCGTCAGGAAGCAATCATCTCTTTGGGTGCCCTGGGGATCCGTAACGAAAAGGTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CCA 90 bp | CTTAGCCCGTCGAAAGTCCGTGATGCACAAGTCATCTGGGCTCTCTaGCTTCTTCCGGAACCTTGTATGCTCTGTCTTCACAGCCTTCGG | + |
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Preference number: 5 (lower is better) Translates to: LSPSKVRDAQVIWAL*LLPEPCMLCLHSLR Trigger: CCGAAGGCTGTGAAGACAGAGCATACAAGGTTCCGGAAGAAGCCAGAGAGCCCAGATGACTTGTGCATCACGGACTTTCGACGGGCTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS GCA 90 bp | TTTTTATCTAAGTGGAGGCAAGGCGTTGCGTTTGGCCTGCTTGGATaGACCCTCCAGCACTCTGGACTTGGGGGAAATGCTTCCTTTGGC | + |
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Preference number: 5 (lower is better) Translates to: FLSKWRQGVAFGLLG*TLQHSGLGGNASFG Trigger: GCCAAAGGAAGCATTTCCCCCAAGTCCAGAGTGCTGGAGGGTGCATCCAAGCAGGCCAAACGCAACGCCTTGCCTCCACTTAGATAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS GCA 90 bp | TCCTCTTGTGGGGAGTTCAAGCCGTTGGTGAGTTCCTTTAACCTTTaGCACTTCAGGGGGTCTTTGGTGGGATCTAACAACCCTGGTCCC | + |
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Preference number: 5 (lower is better) Translates to: SSCGEFKPLVSSFNL*HFRGSLVGSNNPGP Trigger: GGGACCAGGGTTGTTAGATCCCACCAAAGACCCCCTGAAGTGGCAAAGGTTAAAGGAACTCACCAACGGCTTGAACTCCCCACAAGAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CCA 90 bp | AGGGTTCAGCTTAGCCCGTCGAAAGTCCGTGATGCACAAGTCATCTaGGCTCTCTGGCTTCTTCCGGAACCTTGTATGCTCTGTCTTCAC | + |
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Preference number: 5 (lower is better) Translates to: RVQLSPSKVRDAQVI*ALWLLPEPCMLCLH Trigger: GTGAAGACAGAGCATACAAGGTTCCGGAAGAAGCCAGAGAGCCCAGATGACTTGTGCATCACGGACTTTCGACGGGCTAAGCTGAACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS GCA 90 bp | ACATGGACCCTTTACTCAGACATTGTAGCAAGAACTGTTGGACTATaGTGTTGCTGGGCCTCAGGAACCCCAAGCACAGGGCTGCCTCTA | + |
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Preference number: 5 (lower is better) Translates to: TWTLYSDIVARTVGL*CCWASGTPSTGLPL Trigger: TAGAGGCAGCCCTGTGCTTGGGGTTCCTGAGGCCCAGCAACAGCATAGTCCAACAGTTCTTGCTACAATGTCTGAGTAAAGGGTCCATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CCA 90 bp | AGCCCCTGTGCCTGGATCTTTTCCAGCCCAACAGTCTTGAGCATCTaGGTGGCTTCCAAGCGATCGTCAATGACATTAGAGTGTAGCTGT | + |
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Preference number: 5 (lower is better) Translates to: SPCAWIFSSPTVLSI*VASKRSSMTLECSC Trigger: ACAGCTACACTCTAATGTCATTGACGATCGCTTGGAAGCCACCCAGATGCTCAAGACTGTTGGGCTGGAAAAGATCCAGGCACAGGGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS TCA 90 bp | CTGCATAGCACTGTTCATCCTCTTGTGGGGAGTTCAAGCCGTTGGTaGGTTCCTTTAACCTTTGCCACTTCAGGGGGTCTTTGGTGGGAT | + |
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Preference number: 5 (lower is better) Translates to: LHSTVHPLVGSSSRW*VPLTFATSGGLWWD Trigger: ATCCCACCAAAGACCCCCTGAAGTGGCAAAGGTTAAAGGAACTCACCAACGGCTTGAACTCCCCACAAGAGGATGAACAGTGCTATGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS TCA 90 bp | CAGGAGTTCAGCGCTACTCGTAGCCCCACCAGGGTCTCCAGCCTTTaGCTTTCCTTGTGTTCCATCAACTGTTTGATGAAAGCCTTGATC | + |
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Preference number: 5 (lower is better) Translates to: QEFSATRSPTRVSSL*LSLCSINCLMKALI Trigger: GATCAAGGCTTTCATCAAACAGTTGATGGAACACAAGGAAAGTCAAAGGCTGGAGACCCTGGTGGGGCTACGAGTAGCGCTGAACTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS GCA 90 bp | ACCCTTTACTCAGACATTGTAGCAAGAACTGTTGGACTATGCTGTTaGTGGGCCTCAGGAACCCCAAGCACAGGGCTGCCTCTAAGGATT | + |
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Preference number: 5 (lower is better) Translates to: TLYSDIVARTVGLCC*WASGTPSTGLPLRI Trigger: AATCCTTAGAGGCAGCCCTGTGCTTGGGGTTCCTGAGGCCCAGCAACAGCATAGTCCAACAGTTCTTGCTACAATGTCTGAGTAAAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CCA 90 bp | CTTTACTCAGACATTGTAGCAAGAACTGTTGGACTATGCTGTTGCTaGGCCTCAGGAACCCCAAGCACAGGGCTGCCTCTAAGGATTCTT | + |
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Preference number: 5 (lower is better) Translates to: LYSDIVARTVGLCCC*ASGTPSTGLPLRIL Trigger: AAGAATCCTTAGAGGCAGCCCTGTGCTTGGGGTTCCTGAGGCCCAGCAACAGCATAGTCCAACAGTTCTTGCTACAATGTCTGAGTAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CCA 90 bp | TTCACACTCTTGGTCTCTTCTGCATCTAGCATGTCCAGCAGCAAATaGAACACCTTTTCGTTACGGATCCCCAGGGCACCCAAAGAGATG | + |
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Preference number: 5 (lower is better) Translates to: FTLLVSSASSMSSSK*NTFSLRIPRAPKEM Trigger: CATCTCTTTGGGTGCCCTGGGGATCCGTAACGAAAAGGTGTTCCATTTGCTGCTGGACATGCTAGATGCAGAAGAGACCAAGAGTGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS TCA 90 bp | TTAGAGTGTAGCTGTTCCAAAATGGCCCTGGTGACAGCAGCTGAGTaGACATTCATCATCTTGACCAGCATCCTTAGTGCCTTCATCCTC | + |
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Preference number: 5 (lower is better) Translates to: LECSCSKMALVTAAE*TFIILTSILSAFIL Trigger: GAGGATGAAGGCACTAAGGATGCTGGTCAAGATGATGAATGTTCACTCAGCTGCTGTCACCAGGGCCATTTTGGAACAGCTACACTCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS TCA 90 bp | AAAGAAACCTATTTTGAGGCAACACCATGTTCCGGAGTTGTTCCCTaGTTTTTGGTTCCCAAGGTCCTGTGGCCTGTGGCCTTTGCTTTT | + |
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Preference number: 5 (lower is better) Translates to: KETYFEATPCSGVVP*FLVPKVLWPVAFAF Trigger: AAAAGCAAAGGCCACAGGCCACAGGACCTTGGGAACCAAAAATCAGGGAACAACTCCGGAACATGGTGTTGCCTCAAAATAGGTTTCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CCA 90 bp | CCTGGTCCCTCCTTAGGTTTTAAAGTCAACTTGCTGATAGAGACATaGAGGTTTGGCATTTGGGCACTGTCTTTGAAGTACCTTGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: PGPSLGFKVNLLIET*RFGIWALSLKYLGK Trigger: CTTCCCAAGGTACTTCAAAGACAGTGCCCAAATGCCAAACCTCCATGTCTCTATCAGCAAGTTGACTTTAAAACCTAAGGAGGGACCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CCA 90 bp | AGGCCCAAACAAGTAGTGTTTCTTGTATGCTCTTCTTCACACTCTTaGTCTCTTCTGCATCTAGCATGTCCAGCAGCAAATGGAACACCT | + |
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Preference number: 5 (lower is better) Translates to: RPKQVVFLVCSSSHS*SLLHLACPAANGTP Trigger: AGGTGTTCCATTTGCTGCTGGACATGCTAGATGCAGAAGAGACCAAGAGTGTGAAGAAGAGCATACAAGAAACACTACTTGTTTGGGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS GCA 90 bp | ATTAAAGGCTTCATCTTGAGCACATCCACGGTTTCAGACACAGCCTaGCTTATTACTTGGAAGGGTTCACTATACATTTTCCTCTTGAGC | + |
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Preference number: 5 (lower is better) Translates to: IKGFILSTSTVSDTA*LITWKGSLYIFLLS Trigger: GCTCAAGAGGAAAATGTATAGTGAACCCTTCCAAGTAATAAGGCAGGCTGTGTCTGAAACCGTGGATGTGCTCAAGATGAAGCCTTTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CCA 90 bp | CTGTCTTCACAGCCTTCGGTATGTCATACACAAAGAAAACCTTGTTaGTCAGCTTGTTTTGGATCCATGGATTTCTTGAGGCCCAAACAA | + |
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Preference number: 5 (lower is better) Translates to: LSSQPSVCHTQRKPC*SACFGSMDFLRPKQ Trigger: TTGTTTGGGCCTCAAGAAATCCATGGATCCAAAACAAGCTGACCAACAAGGTTTTCTTTGTGTATGACATACCGAAGGCTGTGAAGACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CCA 90 bp | ATCTTGAGCACATCCACGGTTTCAGACACAGCCTGCCTTATTACTTaGAAGGGTTCACTATACATTTTCCTCTTGAGCAAGTCAAATGTA | + |
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Preference number: 5 (lower is better) Translates to: ILSTSTVSDTACLIT*KGSLYIFLLSKSNV Trigger: TACATTTGACTTGCTCAAGAGGAAAATGTATAGTGAACCCTTCCAAGTAATAAGGCAGGCTGTGTCTGAAACCGTGGATGTGCTCAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS GCA 72 bp | AAGTGGAGGCAAGGCGTTGCGTTTGGCCTGCTTGGATaGACCCTCCAGCACTCTGGACTTGGGGGAAATGCT | + |
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Preference number: 6 (lower is better) Translates to: KWRQGVAFGLLG*TLQHSGLGGNA Trigger: AGCATTTCCCCCAAGTCCAGAGTGCTGGAGGGTGCATCCAAGCAGGCCAAACGCAACGCCTTGCCTCCACTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CAA 90 bp | GCGTTGCGTTTGGCCTGCTTGGATGCACCCTCCAGCACTCTGGACTaGGGGGAAATGCTTCCTTTGGCACCTTGTAACAGGACAAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: ALRLACLDAPSSTLD*GEMLPLAPCNRTRA Trigger: TGCCCTTGTCCTGTTACAAGGTGCCAAAGGAAGCATTTCCCCCAAGTCCAGAGTGCTGGAGGGTGCATCCAAGCAGGCCAAACGCAACGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CAA 90 bp | CGGGCTTTTTATCTAAGTGGAGGCAAGGCGTTGCGTTTGGCCTGCTaGGATGCACCCTCCAGCACTCTGGACTTGGGGGAAATGCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: RAFYLSGGKALRLAC*DAPSSTLDLGEMLP Trigger: AGGAAGCATTTCCCCCAAGTCCAGAGTGCTGGAGGGTGCATCCAAGCAGGCCAAACGCAACGCCTTGCCTCCACTTAGATAAAAAGCCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CCA 72 bp | TGCGTTTGGCCTGCTTGGATGCACCCTCCAGCACTCTaGACTTGGGGGAAATGCTTCCTTTGGCACCTTGTA | + |
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Preference number: 6 (lower is better) Translates to: CVWPAWMHPPAL*TWGKCFLWHLV Trigger: TACAAGGTGCCAAAGGAAGCATTTCCCCCAAGTCCAGAGTGCTGGAGGGTGCATCCAAGCAGGCCAAACGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CAA 72 bp | TTGGCCTGCTTGGATGCACCCTCCAGCACTCTGGACTaGGGGGAAATGCTTCCTTTGGCACCTTGTAACAGG | + |
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Preference number: 6 (lower is better) Translates to: LACLDAPSSTLD*GEMLPLAPCNR Trigger: CCTGTTACAAGGTGCCAAAGGAAGCATTTCCCCCAAGTCCAGAGTGCTGGAGGGTGCATCCAAGCAGGCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS GCA 72 bp | TTCGTTACGGATCCCCAGGGCACCCAAAGAGATGATTaGTTCCTGACGGTCACTGACATCTGGGCTCATCAG | + |
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Preference number: 6 (lower is better) Translates to: FVTDPQGTQRDD*FLTVTDIWAHQ Trigger: CTGATGAGCCCAGATGTCAGTGACCGTCAGGAAGCAATCATCTCTTTGGGTGCCCTGGGGATCCGTAACGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CCA 72 bp | CGCCAGTGTGTGAAGAGATCGGGCTTTTTATCTAAGTaGAGGCAAGGCGTTGCGTTTGGCCTGCTTGGATGC | + |
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Preference number: 6 (lower is better) Translates to: RQCVKRSGFLSK*RQGVAFGLLGC Trigger: GCATCCAAGCAGGCCAAACGCAACGCCTTGCCTCCACTTAGATAAAAAGCCCGATCTCTTCACACACTGGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CAA 72 bp | AGAGATCGGGCTTTTTATCTAAGTGGAGGCAAGGCGTaGCGTTTGGCCTGCTTGGATGCACCCTCCAGCACT | + |
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Preference number: 6 (lower is better) Translates to: RDRAFYLSGGKA*RLACLDAPSST Trigger: AGTGCTGGAGGGTGCATCCAAGCAGGCCAAACGCAACGCCTTGCCTCCACTTAGATAAAAAGCCCGATCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CCA 72 bp | TTGGTCTCTTCTGCATCTAGCATGTCCAGCAGCAAATaGAACACCTTTTCGTTACGGATCCCCAGGGCACCC | + |
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Preference number: 6 (lower is better) Translates to: LVSSASSMSSSK*NTFSLRIPRAP Trigger: GGGTGCCCTGGGGATCCGTAACGAAAAGGTGTTCCATTTGCTGCTGGACATGCTAGATGCAGAAGAGACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CAA 90 bp | GACCCTTTACTCAGACATTGTAGCAAGAACTGTTGGACTATGCTGTaGCTGGGCCTCAGGAACCCCAAGCACAGGGCTGCCTCTAAGGAT | + |
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Preference number: 6 (lower is better) Translates to: DPLLRHCSKNCWTML*LGLRNPKHRAASKD Trigger: ATCCTTAGAGGCAGCCCTGTGCTTGGGGTTCCTGAGGCCCAGCAACAGCATAGTCCAACAGTTCTTGCTACAATGTCTGAGTAAAGGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CAA 90 bp | AGTTTCACCAGCCCCTGTGCCTGGATCTTTTCCAGCCCAACAGTCTaGAGCATCTGGGTGGCTTCCAAGCGATCGTCAATGACATTAGAG | + |
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Preference number: 6 (lower is better) Translates to: SFTSPCAWIFSSPTV*SIWVASKRSSMTLE Trigger: CTCTAATGTCATTGACGATCGCTTGGAAGCCACCCAGATGCTCAAGACTGTTGGGCTGGAAAAGATCCAGGCACAGGGGCTGGTGAAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS TCA 72 bp | GGCCAGGGACTTATAGGCCTCGTTCTTCACTTTTGTTaGACCAGTTTGAGCCACCTGCCACAGTGCTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: GQGLIGLVLHFC*TSLSHLPQCFH Trigger: ATGGAAGCACTGTGGCAGGTGGCTCAAACTGGTTCAACAAAAGTGAAGAACGAGGCCTATAAGTCCCTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS TCA 72 bp | TATTTTGAGGCAACACCATGTTCCGGAGTTGTTCCCTaGTTTTTGGTTCCCAAGGTCCTGTGGCCTGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: YFEATPCSGVVP*FLVPKVLWPVA Trigger: GGCCACAGGCCACAGGACCTTGGGAACCAAAAATCAGGGAACAACTCCGGAACATGGTGTTGCCTCAAAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS GCA 72 bp | GGGGAGTTCAAGCCGTTGGTGAGTTCCTTTAACCTTTaGCACTTCAGGGGGTCTTTGGTGGGATCTAACAAC | + |
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Preference number: 6 (lower is better) Translates to: GEFKPLVSSFNL*HFRGSLVGSNN Trigger: GTTGTTAGATCCCACCAAAGACCCCCTGAAGTGGCAAAGGTTAAAGGAACTCACCAACGGCTTGAACTCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CCA 72 bp | GCCTGGATCTTTTCCAGCCCAACAGTCTTGAGCATCTaGGTGGCTTCCAAGCGATCGTCAATGACATTAGAG | + |
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Preference number: 6 (lower is better) Translates to: AWIFSSPTVLSI*VASKRSSMTLE Trigger: CTCTAATGTCATTGACGATCGCTTGGAAGCCACCCAGATGCTCAAGACTGTTGGGCTGGAAAAGATCCAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CCA 72 bp | TCGAAAGTCCGTGATGCACAAGTCATCTGGGCTCTCTaGCTTCTTCCGGAACCTTGTATGCTCTGTCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: SKVRDAQVIWAL*LLPEPCMLCLH Trigger: GTGAAGACAGAGCATACAAGGTTCCGGAAGAAGCCAGAGAGCCCAGATGACTTGTGCATCACGGACTTTCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CAA 72 bp | AACAACGATTTTGACTCCCGTTCCTTGCGTTGCTCATaGAGGGTGCGCCAGTGTGTGAAGAGATCGGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: NNDFDSRSLRCS*RVRQCVKRSGF Trigger: AAAGCCCGATCTCTTCACACACTGGCGCACCCTCAATGAGCAACGCAAGGAACGGGAGTCAAAATCGTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CAA 72 bp | GTGAGTTCCTTTAACCTTTGCCACTTCAGGGGGTCTTaGGTGGGATCTAACAACCCTGGTCCCTCCTTAGGT | + |
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Preference number: 6 (lower is better) Translates to: VSSFNLCHFRGS*VGSNNPGPSLG Trigger: ACCTAAGGAGGGACCAGGGTTGTTAGATCCCACCAAAGACCCCCTGAAGTGGCAAAGGTTAAAGGAACTCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS TCA 72 bp | ACTGTTCATCCTCTTGTGGGGAGTTCAAGCCGTTGGTaGGTTCCTTTAACCTTTGCCACTTCAGGGGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: TVHPLVGSSSRW*VPLTFATSGGL Trigger: AAGACCCCCTGAAGTGGCAAAGGTTAAAGGAACTCACCAACGGCTTGAACTCCCCACAAGAGGATGAACAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS GCA 72 bp | TTCCAAAACAACGATTTTGACTCCCGTTCCTTGCGTTaGTCATTGAGGGTGCGCCAGTGTGTGAAGAGATCG | + |
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Preference number: 6 (lower is better) Translates to: FQNNDFDSRSLR*SLRVRQCVKRS Trigger: CGATCTCTTCACACACTGGCGCACCCTCAATGAGCAACGCAAGGAACGGGAGTCAAAATCGTTGTTTTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS GCA 72 bp | TCATCTGGGCTCTCTGGCTTCTTCCGGAACCTTGTATaGTCTGTCTTCACAGCCTTCGGTATGTCATACACA | + |
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Preference number: 6 (lower is better) Translates to: SSGLSGFFRNLV*SVFTAFGMSYT Trigger: TGTGTATGACATACCGAAGGCTGTGAAGACAGAGCATACAAGGTTCCGGAAGAAGCCAGAGAGCCCAGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CAA 90 bp | AAGCCGTTGGTGAGTTCCTTTAACCTTTGCCACTTCAGGGGGTCTTaGGTGGGATCTAACAACCCTGGTCCCTCCTTAGGTTTTAAAGTC | + |
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Preference number: 6 (lower is better) Translates to: KPLVSSFNLCHFRGS*VGSNNPGPSLGFKV Trigger: GACTTTAAAACCTAAGGAGGGACCAGGGTTGTTAGATCCCACCAAAGACCCCCTGAAGTGGCAAAGGTTAAAGGAACTCACCAACGGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS GCA 72 bp | CTTGAGCAAGTCAAATGTAAGTTTCACCAGCCCCTGTaGCTGGATCTTTTCCAGCCCAACAGTCTTGAGCAT | + |
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Preference number: 6 (lower is better) Translates to: LEQVKCKFHQPL*LDLFQPNSLEH Trigger: ATGCTCAAGACTGTTGGGCTGGAAAAGATCCAGGCACAGGGGCTGGTGAAACTTACATTTGACTTGCTCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CAA 72 bp | CACAGGGCTGCCTCTAAGGATTCTTCATTCAGTGGCTaGTATATCAGATTCTGCAGCAGAAGCACCAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: HRAASKDSSFSG*YIRFCSRSTSF Trigger: AAAGCTGGTGCTTCTGCTGCAGAATCTGATATACAAGCCACTGAATGAAGAATCCTTAGAGGCAGCCCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CAA 72 bp | AAGAAACCTATTTTGAGGCAACACCATGTTCCGGAGTaGTTCCCTGATTTTTGGTTCCCAAGGTCCTGTGGC | + |
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Preference number: 6 (lower is better) Translates to: KKPILRQHHVPE*FPDFWFPRSCG Trigger: GCCACAGGACCTTGGGAACCAAAAATCAGGGAACAACTCCGGAACATGGTGTTGCCTCAAAATAGGTTTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CAA 90 bp | ACAGCCTGCCTTATTACTTGGAAGGGTTCACTATACATTTTCCTCTaGAGCAAGTCAAATGTAAGTTTCACCAGCCCCTGTGCCTGGATC | + |
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Preference number: 6 (lower is better) Translates to: TACLITWKGSLYIFL*SKSNVSFTSPCAWI Trigger: GATCCAGGCACAGGGGCTGGTGAAACTTACATTTGACTTGCTCAAGAGGAAAATGTATAGTGAACCCTTCCAAGTAATAAGGCAGGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CAA 72 bp | CTTTCCTTGTGTTCCATCAACTGTTTGATGAAAGCCTaGATCACAGACTTATCCAAGCAACCTAGGCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: LSLCSINCLMKA*ITDLSKQPRLA Trigger: GGCCAGCCTAGGTTGCTTGGATAAGTCTGTGATCAAGGCTTTCATCAAACAGTTGATGGAACACAAGGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CAA 90 bp | CTCATCAGTTGCGCCTCCATTAGTTTCATTATTAAAGGCTTCATCTaGAGCACATCCACGGTTTCAGACACAGCCTGCCTTATTACTTGG | + |
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Preference number: 6 (lower is better) Translates to: LISCASISFIIKGFI*STSTVSDTACLITW Trigger: CCAAGTAATAAGGCAGGCTGTGTCTGAAACCGTGGATGTGCTCAAGATGAAGCCTTTAATAATGAAACTAATGGAGGCGCAACTGATGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CAA 90 bp | TGCTCTGTCTTCACAGCCTTCGGTATGTCATACACAAAGAAAACCTaGTTGGTCAGCTTGTTTTGGATCCATGGATTTCTTGAGGCCCAA | + |
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Preference number: 6 (lower is better) Translates to: CSVFTAFGMSYTKKT*LVSLFWIHGFLEAQ Trigger: TTGGGCCTCAAGAAATCCATGGATCCAAAACAAGCTGACCAACAAGGTTTTCTTTGTGTATGACATACCGAAGGCTGTGAAGACAGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CCA 72 bp | GTCAACTTGCTGATAGAGACATGGAGGTTTGGCATTTaGGCACTGTCTTTGAAGTACCTTGGGAAGTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: VNLLIETWRFGI*ALSLKYLGKFL Trigger: AAGAAACTTCCCAAGGTACTTCAAAGACAGTGCCCAAATGCCAAACCTCCATGTCTCTATCAGCAAGTTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CCA 72 bp | ACATCCACGGTTTCAGACACAGCCTGCCTTATTACTTaGAAGGGTTCACTATACATTTTCCTCTTGAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: TSTVSDTACLIT*KGSLYIFLLSK Trigger: CTTGCTCAAGAGGAAAATGTATAGTGAACCCTTCCAAGTAATAAGGCAGGCTGTGTCTGAAACCGTGGATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CAA 72 bp | AGTCAACTTGCTGATAGAGACATGGAGGTTTGGCATTaGGGCACTGTCTTTGAAGTACCTTGGGAAGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: SQLADRDMEVWH*GTVFEVPWEVS Trigger: AGAAACTTCCCAAGGTACTTCAAAGACAGTGCCCAAATGCCAAACCTCCATGTCTCTATCAGCAAGTTGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CAA 90 bp | TCTGTCTTCACAGCCTTCGGTATGTCATACACAAAGAAAACCTTGTaGGTCAGCTTGTTTTGGATCCATGGATTTCTTGAGGCCCAAACA | + |
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Preference number: 6 (lower is better) Translates to: SVFTAFGMSYTKKTL*VSLFWIHGFLEAQT Trigger: TGTTTGGGCCTCAAGAAATCCATGGATCCAAAACAAGCTGACCAACAAGGTTTTCTTTGTGTATGACATACCGAAGGCTGTGAAGACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS GCA 72 bp | TTCATCTTGAGCACATCCACGGTTTCAGACACAGCCTaGCTTATTACTTGGAAGGGTTCACTATACATTTTC | + |
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Preference number: 6 (lower is better) Translates to: FILSTSTVSDTA*LITWKGSLYIF Trigger: GAAAATGTATAGTGAACCCTTCCAAGTAATAAGGCAGGCTGTGTCTGAAACCGTGGATGTGCTCAAGATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CAA 72 bp | CCTTGTTGGTCAGCTTGTTTTGGATCCATGGATTTCTaGAGGCCCAAACAAGTAGTGTTTCTTGTATGCTCT | + |
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Preference number: 6 (lower is better) Translates to: PCWSACFGSMDF*RPKQVVFLVCS Trigger: AGAGCATACAAGAAACACTACTTGTTTGGGCCTCAAGAAATCCATGGATCCAAAACAAGCTGACCAACAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CAA 90 bp | ACAGCCTTCGGTATGTCATACACAAAGAAAACCTTGTTGGTCAGCTaGTTTTGGATCCATGGATTTCTTGAGGCCCAAACAAGTAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: TAFGMSYTKKTLLVS*FWIHGFLEAQTSSV Trigger: AACACTACTTGTTTGGGCCTCAAGAAATCCATGGATCCAAAACAAGCTGACCAACAAGGTTTTCTTTGTGTATGACATACCGAAGGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS GCA 72 bp | GATTTCTTGAGGCCCAAACAAGTAGTGTTTCTTGTATaGTCTTCTTCACACTCTTGGTCTCTTCTGCATCTA | + |
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Preference number: 6 (lower is better) Translates to: DFLRPKQVVFLV*SSSHSWSLLHL Trigger: TAGATGCAGAAGAGACCAAGAGTGTGAAGAAGAGCATACAAGAAACACTACTTGTTTGGGCCTCAAGAAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CCA 72 bp | TCCTTAGGTTTTAAAGTCAACTTGCTGATAGAGACATaGAGGTTTGGCATTTGGGCACTGTCTTTGAAGTAC | + |
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Preference number: 6 (lower is better) Translates to: SLGFKVNLLIET*RFGIWALSLKY Trigger: GTACTTCAAAGACAGTGCCCAAATGCCAAACCTCCATGTCTCTATCAGCAAGTTGACTTTAAAACCTAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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| CDS CAA 90 bp | AACTTGCTGATAGAGACATGGAGGTTTGGCATTTGGGCACTGTCTTaGAAGTACCTTGGGAAGTTTCTTCTTTTCCAAAACAACGATTTT | + |
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Preference number: 6 (lower is better) Translates to: NLLIETWRFGIWALS*KYLGKFLLFQNNDF Trigger: AAAATCGTTGTTTTGGAAAAGAAGAAACTTCCCAAGGTACTTCAAAGACAGTGCCCAAATGCCAAACCTCCATGTCTCTATCAGCAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019069.4 |
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