RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HEATR6 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000000976

Ensembl transcript IDs: ENSMUST00000001002.8

Found 280 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGAGGGTGTGGAAGCCATGCAGGGTCAGGGCAGGGTCAGCTCGATaGCTGGGCCCTCCATTTCAGAATCACCCTGAAGGAATGCAAGCT +
Preference number: 1 (lower is better)
Translates to: RRVWKPCRVRAGSAR*LGPPFQNHPEGMQA
Trigger: AGCTTGCATTCCTTCAGGGTGATTCTGAAATGGAGGGCCCAGGCATCGAGCTGACCCTGCCCTGACCCTGCATGGCTTCCACACCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR CCA 90 bp GGGTGTGGAAGCCATGCAGGGTCAGGGCAGGGTCAGCTCGATGCCTaGGCCCTCCATTTCAGAATCACCCTGAAGGAATGCAAGCTCACA +
Preference number: 1 (lower is better)
Translates to: GCGSHAGSGQGQLDA*ALHFRITLKECKLT
Trigger: TGTGAGCTTGCATTCCTTCAGGGTGATTCTGAAATGGAGGGCCCAGGCATCGAGCTGACCCTGCCCTGACCCTGCATGGCTTCCACACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR TCA 90 bp GGCAGGGTCAGCTCGATGCCTGGGCCCTCCATTTCAGAATCACCCTaGAGGAATGCAAGCTCACACAATGTTCTGTGTGGACCCCTCACT +
Preference number: 1 (lower is better)
Translates to: GRVSSMPGPSISESP*RNASSHNVLCGPLT
Trigger: AGTGAGGGGTCCACACAGAACATTGTGTGAGCTTGCATTCCTTCAGGGTGATTCTGAAATGGAGGGCCCAGGCATCGAGCTGACCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR CCA 90 bp TTCAGAATCACCCTGAAGGAATGCAAGCTCACACAATGTTCTGTGTaGACCCCTCACTGTGTAGGCGGACCCCTTTGGACAGGCGAGCCC +
Preference number: 1 (lower is better)
Translates to: FRITLKECKLTQCSV*TPHCVGGPLWTGEP
Trigger: GGGCTCGCCTGTCCAAAGGGGTCCGCCTACACAGTGAGGGGTCCACACAGAACATTGTGTGAGCTTGCATTCCTTCAGGGTGATTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR GCA 90 bp CAGCTCGATGCCTGGGCCCTCCATTTCAGAATCACCCTGAAGGAATaGAAGCTCACACAATGTTCTGTGTGGACCCCTCACTGTGTAGGC +
Preference number: 1 (lower is better)
Translates to: QLDAWALHFRITLKE*KLTQCSVWTPHCVG
Trigger: GCCTACACAGTGAGGGGTCCACACAGAACATTGTGTGAGCTTGCATTCCTTCAGGGTGATTCTGAAATGGAGGGCCCAGGCATCGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR GCA 90 bp TCGCTGAGGCAGGGTCTCTCAACTGAACCCAGAGCGTGCTATATTTaGTCATACAGTGCCCATCTGGCTTTTTGGCAGCTTCTGGTGATT +
Preference number: 1 (lower is better)
Translates to: SLRQGLSTEPRACYI*SYSAHLAFWQLLVI
Trigger: AATCACCAGAAGCTGCCAAAAAGCCAGATGGGCACTGTATGAGCAAATATAGCACGCTCTGGGTTCAGTTGAGAGACCCTGCCTCAGCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR TCA 90 bp CCTTTCCCACTGTGCTATCTCCCCAGTGTCTGCTGGGCATTTGTTTaGGATAGACTCTCCTTATGTAGCTCAGGTTTGCCTGGAACTACA +
Preference number: 1 (lower is better)
Translates to: PFPLCYLPSVCWAFV*DRLSLCSSGLPGTT
Trigger: TGTAGTTCCAGGCAAACCTGAGCTACATAAGGAGAGTCTATCTCAAACAAATGCCCAGCAGACACTGGGGAGATAGCACAGTGGGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR GCA 90 bp GGCTTTTTGGCAGCTTCTGGTGATTCAAATTACAGTTCTCAGGCTTaGACAAGTACCTTTCCCACTGTGCTATCTCCCCAGTGTCTGCTG +
Preference number: 1 (lower is better)
Translates to: GFLAASGDSNYSSQA*TSTFPTVLSPQCLL
Trigger: CAGCAGACACTGGGGAGATAGCACAGTGGGAAAGGTACTTGTGCAAGCCTGAGAACTGTAATTTGAATCACCAGAAGCTGCCAAAAAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR GCA 90 bp GCTGGGCATTTGTTTGAGATAGACTCTCCTTATGTAGCTCAGGTTTaGCTGGAACTACACAGCAAAGGAGAGACTTACAAACTCCTGGCC +
Preference number: 1 (lower is better)
Translates to: AGHLFEIDSPYVAQV*LELHSKGETYKLLA
Trigger: GGCCAGGAGTTTGTAAGTCTCTCCTTTGCTGTGTAGTTCCAGGCAAACCTGAGCTACATAAGGAGAGTCTATCTCAAACAAATGCCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR TCA 90 bp TGGTTGTCAGGATTCAGTCTCCATTGTTCTCCATCTTATATTCGCTaGGGCAGGGTCTCTCAACTGAACCCAGAGCGTGCTATATTTGCT +
Preference number: 1 (lower is better)
Translates to: WLSGFSLHCSPSYIR*GRVSQLNPERAIFA
Trigger: AGCAAATATAGCACGCTCTGGGTTCAGTTGAGAGACCCTGCCTCAGCGAATATAAGATGGAGAACAATGGAGACTGAATCCTGACAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR CCA 90 bp CCCAGAGCGTGCTATATTTGCTCATACAGTGCCCATCTGGCTTTTTaGCAGCTTCTGGTGATTCAAATTACAGTTCTCAGGCTTGCACAA +
Preference number: 1 (lower is better)
Translates to: PRACYICSYSAHLAF*QLLVIQITVLRLAQ
Trigger: TTGTGCAAGCCTGAGAACTGTAATTTGAATCACCAGAAGCTGCCAAAAAGCCAGATGGGCACTGTATGAGCAAATATAGCACGCTCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR TCA 90 bp GGATTTCAGGTGTGGACTGCCACGCCTAGCATTACTTCAGTTTTCTaGGACTGGGTTTTGCTATATTACCCATTGCTCGCTCTTCTATCT +
Preference number: 1 (lower is better)
Translates to: GFQVWTATPSITSVF*DWVLLYYPLLALLS
Trigger: AGATAGAAGAGCGAGCAATGGGTAATATAGCAAAACCCAGTCTCAGAAAACTGAAGTAATGCTAGGCGTGGCAGTCCACACCTGAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR TCA 90 bp ATATTTGCTCATACAGTGCCCATCTGGCTTTTTGGCAGCTTCTGGTaGTTCAAATTACAGTTCTCAGGCTTGCACAAGTACCTTTCCCAC +
Preference number: 1 (lower is better)
Translates to: IFAHTVPIWLFGSFW*FKLQFSGLHKYLSH
Trigger: GTGGGAAAGGTACTTGTGCAAGCCTGAGAACTGTAATTTGAATCACCAGAAGCTGCCAAAAAGCCAGATGGGCACTGTATGAGCAAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR GCA 90 bp GCATTACTTCAGTTTTCTGAGACTGGGTTTTGCTATATTACCCATTaGTCGCTCTTCTATCTCGGCCTACAGGGTACTGGGATAACAGAA +
Preference number: 1 (lower is better)
Translates to: ALLQFSETGFCYITH*SLFYLGLQGTGITE
Trigger: TTCTGTTATCCCAGTACCCTGTAGGCCGAGATAGAAGAGCGAGCAATGGGTAATATAGCAAAACCCAGTCTCAGAAAACTGAAGTAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR CCA 90 bp TTTCTGTTGTATTTCTCGTGTGTGCGTGTGTGTGTGTGTCTGAGGTaGTTGTCAGGATTCAGTCTCCATTGTTCTCCATCTTATATTCGC +
Preference number: 1 (lower is better)
Translates to: FLLYFSCVRVCVCLR*LSGFSLHCSPSYIR
Trigger: GCGAATATAAGATGGAGAACAATGGAGACTGAATCCTGACAACCACCTCAGACACACACACACACGCACACACGAGAAATACAACAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR TCA 90 bp TTTGGTTTCTGTTGTATTTCTCGTGTGTGCGTGTGTGTGTGTGTCTaGGGTGGTTGTCAGGATTCAGTCTCCATTGTTCTCCATCTTATA +
Preference number: 1 (lower is better)
Translates to: FGFCCISRVCVCVCV*GGCQDSVSIVLHLI
Trigger: TATAAGATGGAGAACAATGGAGACTGAATCCTGACAACCACCTCAGACACACACACACACGCACACACGAGAAATACAACAGAAACCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR-3UTR CCA 90 bp AAGCTCACACAATGTTCTGTGTGGACCCCTCACTGTGTAGGCGGACCCCTTTGGCAGGATCCTGGACTGTaGGGAGGGGAGGAGCCCTGG +
Preference number: 2 (lower is better)
Translates to: KLTQCSVWTPHCVGGPLWQDPGL*GGEEPW
Trigger: CCAGGGCTCCTCCCCTCCCCACAGTCCAGGATCCTG...CCAAAGGGGTCCGCCTACACAGTGAGGGGTCCACACAGAACATTGTGTGAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR-3UTR CCA 90 bp AAGCTCACACAATGTTCTGTGTGGACCCCTCACTGTGTAGGCGGACCCCTTTGGTGTGGCGCAGGATCCTaGACTGTGGGGAGGGGAGGA +
Preference number: 2 (lower is better)
Translates to: KLTQCSVWTPHCVGGPLWCGAGS*TVGRGG
Trigger: TCCTCCCCTCCCCACAGTCCAGGATCCTGCGCCACA...CCAAAGGGGTCCGCCTACACAGTGAGGGGTCCACACAGAACATTGTGTGAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR-3UTR CCA 90 bp GTGGTTGTCAGGATTCAGTCTCCATTGTTCTCCATCTTATATTCGCTGAGGCAGGGAGGGGAGGAGCCCTaGGGTGCACGCAGGTGCAGG +
Preference number: 2 (lower is better)
Translates to: VVVRIQSPLFSILYSLRQGGEEP*GARRCR
Trigger: CCTGCACCTGCGTGCACCCCAGGGCTCCTCCCCTCC...CTGCCTCAGCGAATATAAGATGGAGAACAATGGAGACTGAATCCTGACAACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR-3UTR GCA 90 bp AATCACCCTGAAGGAATGCAAGCTCACACAATGTTCTGTGTGGACCCCTCACTGGGGGTCTGCAGCTGCTaGAGCTGTGCCAGCAGACAC +
Preference number: 2 (lower is better)
Translates to: NHPEGMQAHTMFCVDPSLGVCSC*SCASRH
Trigger: GTGTCTGCTGGCACAGCTGCAGCAGCTGCAGACCCC...CAGTGAGGGGTCCACACAGAACATTGTGTGAGCTTGCATTCCTTCAGGGTGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR-3UTR TCA 90 bp AATCACCCTGAAGGAATGCAAGCTCACACAATGTTCTGTGTGGACCCCTCACTGCCAGCAGACACTGCATaGGACCTTTGCTCCGATTGG +
Preference number: 2 (lower is better)
Translates to: NHPEGMQAHTMFCVDPSLPADTA*DLCSDW
Trigger: CCAATCGGAGCAAAGGTCTCATGCAGTGTCTGCTGG...CAGTGAGGGGTCCACACAGAACATTGTGTGAGCTTGCATTCCTTCAGGGTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR-3UTR GCA 90 bp CATCTGGCTTTTTGGCAGCTTCTGGTGATTCAAATTACAGTTCTCAGGCTTGCAGCTCTTGCAGGGGTCTaGAGCTGCTGCAGCTGTGCC +
Preference number: 2 (lower is better)
Translates to: HLAFWQLLVIQITVLRLAALAGV*SCCSCA
Trigger: GGCACAGCTGCAGCAGCTGCAGACCCCTGCAAGAGC...TGCAAGCCTGAGAACTGTAATTTGAATCACCAGAAGCTGCCAAAAAGCCAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR-3UTR GCA 90 bp TGCAAGTATTTTCACCAAGATACAAACTGGCGAAAATTCAAAGAACCAGAGCCTGGAGGAGCCCTGGGGTaGACGCAGGTGCAGGCGAGC +
Preference number: 2 (lower is better)
Translates to: CKYFHQDTNWRKFKEPEPGGALG*TQVQAS
Trigger: GCTCGCCTGCACCTGCGTGCACCCCAGGGCTCCTCC...AGGCTCTGGTTCTTTGAATTTTCGCCAGTTTGTATCTTGGTGAAAATACTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR-3UTR CCA 90 bp CTTACAAACTCCTGGCCCTCGTGCCTTGACTCCTCAGAGCAGGGATTTCAGGTGAATTTAGACAAAAGTTaGTGCTGCTGTGGCGCAGGA +
Preference number: 2 (lower is better)
Translates to: LTNSWPSCLDSSEQGFQVNLDKS*CCCGAG
Trigger: TCCTGCGCCACAGCAGCACCAACTTTTGTCTAAATT...CACCTGAAATCCCTGCTCTGAGGAGTCAAGGCACGAGGGCCAGGAGTTTGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR-3UTR CCA 90 bp AAGCTCACACAATGTTCTGTGTGGACCCCTCACTGTGTAGGCGGACCCCTTTGGCGAGCCCTCTACCATTaGAACATGAAGACTTTAGTC +
Preference number: 2 (lower is better)
Translates to: KLTQCSVWTPHCVGGPLWRALYH*NMKTLV
Trigger: GACTAAAGTCTTCATGTTCCAATGGTAGAGGGCTCG...CCAAAGGGGTCCGCCTACACAGTGAGGGGTCCACACAGAACATTGTGTGAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR-3UTR GCA 90 bp GTCAGGATTCAGTCTCCATTGTTCTCCATCTTATATTCGCTGAGGCAGGGTCTCGTACCTTTCCCACTGTaGTATCTCCCCAGTGTCTGC +
Preference number: 2 (lower is better)
Translates to: VRIQSPLFSILYSLRQGLVPFPL*YLPSVC
Trigger: GCAGACACTGGGGAGATAGCACAGTGGGAAAGGTAC...GAGACCCTGCCTCAGCGAATATAAGATGGAGAACAATGGAGACTGAATCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR-3UTR GCA 90 bp GTGGTTGTCAGGATTCAGTCTCCATTGTTCTCCATCTTATATTCGCTGAGGCAGGCTGCCGGATGCTCCTaGCCTAGAATGAAACTCCAT +
Preference number: 2 (lower is better)
Translates to: VVVRIQSPLFSILYSLRQAAGCS*PRMKLH
Trigger: ATGGAGTTTCATTCTAGGGCAGGAGCATCCGGCAGC...CTGCCTCAGCGAATATAAGATGGAGAACAATGGAGACTGAATCCTGACAACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR-3UTR CCA 90 bp TGGAACTACACAGCAAAGGAGAGACTTACAAACTCCTGGCCCTCGTGCCTTGACCGGCCTACAGGGTACTaGGATAACAGAAATGTTAAC +
Preference number: 2 (lower is better)
Translates to: WNYTAKERLTNSWPSCLDRPTGY*DNRNVN
Trigger: GTTAACATTTCTGTTATCCCAGTACCCTGTAGGCCG...GTCAAGGCACGAGGGCCAGGAGTTTGTAAGTCTCTCCTTTGCTGTGTAGTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR-3UTR CCA 90 bp AATCACCCTGAAGGAATGCAAGCTCACACAATGTTCTGTGTGGACCCCTCACTGGCCCATCTGGCTTTTTaGCAGCTTCTGGTGATTCAA +
Preference number: 2 (lower is better)
Translates to: NHPEGMQAHTMFCVDPSLAHLAF*QLLVIQ
Trigger: TTGAATCACCAGAAGCTGCCAAAAAGCCAGATGGGC...CAGTGAGGGGTCCACACAGAACATTGTGTGAGCTTGCATTCCTTCAGGGTGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR-3UTR TCA 90 bp TGCAAGTATTTTCACCAAGATACAAACTGGCGAAAATTCAAAGAACCAGAGCCTCTGGCCCTCGTGCCTTaGCTCCTCAGAGCAGGGATT +
Preference number: 2 (lower is better)
Translates to: CKYFHQDTNWRKFKEPEPLALVP*LLRAGI
Trigger: AATCCCTGCTCTGAGGAGTCAAGGCACGAGGGCCAG...AGGCTCTGGTTCTTTGAATTTTCGCCAGTTTGTATCTTGGTGAAAATACTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR-3UTR CCA 90 bp CTACCATTGGAACATGAAGACTTTAGTCAGTGTGAGTGCGTGTTCACCAGTCACCATACAGTGCCCATCTaGCTTTTTGGCAGCTTCTGG +
Preference number: 2 (lower is better)
Translates to: LPLEHEDFSQCECVFTSHHTVPI*LFGSFW
Trigger: CCAGAAGCTGCCAAAAAGCCAGATGGGCACTGTATG...GTGACTGGTGAACACGCACTCACACTGACTAAAGTCTTCATGTTCCAATGGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR-3UTR CCA 90 bp GTCAGGATTCAGTCTCCATTGTTCTCCATCTTATATTCGCTGAGGCAGGGTCTCTTGTCTGGGTTAGAATaGCCAGTAATGGAACCACTC +
Preference number: 2 (lower is better)
Translates to: VRIQSPLFSILYSLRQGLLSGLE*PVMEPL
Trigger: GAGTGGTTCCATTACTGGCCATTCTAACCCAGACAA...GAGACCCTGCCTCAGCGAATATAAGATGGAGAACAATGGAGACTGAATCCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR-3UTR CCA 90 bp AGTATTTTCACCAAGATACAAACTGGCGAAAATTCAAAGAACCAGAGCCTGTCAATGCAGAGGAGGGTGTaGAAGCCATGCAGGGTCAGG +
Preference number: 2 (lower is better)
Translates to: SIFTKIQTGENSKNQSLSMQRRV*KPCRVR
Trigger: CCTGACCCTGCATGGCTTCCACACCCTCCTCTGCAT...TGACAGGCTCTGGTTCTTTGAATTTTCGCCAGTTTGTATCTTGGTGAAAATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR-3UTR TCA 90 bp GTGGTTGTCAGGATTCAGTCTCCATTGTTCTCCATCTTATATTCGCTGAGGCAGGCTCCTGCCCTAGAATaGAACTCCATGTATCAAATG +
Preference number: 2 (lower is better)
Translates to: VVVRIQSPLFSILYSLRQAPALE*NSMYQM
Trigger: CATTTGATACATGGAGTTTCATTCTAGGGCAGGAGC...CTGCCTCAGCGAATATAAGATGGAGAACAATGGAGACTGAATCCTGACAACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR-3UTR TCA 90 bp TGCAAGTATTTTCACCAAGATACAAACTGGCGAAAATTCAAAGAACCAGAGCCTGAAAGAAGCCGTAGCTaGGGATGCAGAGGAGGGTGT +
Preference number: 2 (lower is better)
Translates to: CKYFHQDTNWRKFKEPEPERSRS*GCRGGC
Trigger: ACACCCTCCTCTGCATCCTCAGCTACGGCTTCTTTC...AGGCTCTGGTTCTTTGAATTTTCGCCAGTTTGTATCTTGGTGAAAATACTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR-3UTR TCA 90 bp GTGGTTGTCAGGATTCAGTCTCCATTGTTCTCCATCTTATATTCGCTGAGGCAGAGGCTACATAGATCCTaGTTCCTTGTTTCTTGGTTG +
Preference number: 2 (lower is better)
Translates to: VVVRIQSPLFSILYSLRQRLHRS*FLVSWL
Trigger: CAACCAAGAAACAAGGAATCAGGATCTATGTAGCCT...CTGCCTCAGCGAATATAAGATGGAGAACAATGGAGACTGAATCCTGACAACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR-3UTR TCA 90 bp GCCCATCTGGCTTTTTGGCAGCTTCTGGTGATTCAAATTACAGTTCTCAGGCTTTGCTGGGCATTTGTTTaGGATAGACTCTCCTTATGT +
Preference number: 2 (lower is better)
Translates to: AHLAFWQLLVIQITVLRLCWAFV*DRLSLC
Trigger: ACATAAGGAGAGTCTATCTCAAACAAATGCCCAGCA...AAGCCTGAGAACTGTAATTTGAATCACCAGAAGCTGCCAAAAAGCCAGATGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR-3UTR TCA 90 bp AATCACCCTGAAGGAATGCAAGCTCACACAATGTTCTGTGTGGACCCCTCACTGACTGTGTACTTCAAGTaGCAATTTTGGTTTCTGTTG +
Preference number: 2 (lower is better)
Translates to: NHPEGMQAHTMFCVDPSLTVYFK*QFWFLL
Trigger: CAACAGAAACCAAAATTGTCACTTGAAGTACACAGT...CAGTGAGGGGTCCACACAGAACATTGTGTGAGCTTGCATTCCTTCAGGGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR-3UTR CCA 90 bp CATCTGGCTTTTTGGCAGCTTCTGGTGATTCAAATTACAGTTCTCAGGCTTGCAAACCACTCTCCAAAGTaGCGAAGCCCTTTGAGAAAA +
Preference number: 2 (lower is better)
Translates to: HLAFWQLLVIQITVLRLANHSPK*RSPLRK
Trigger: TTTTCTCAAAGGGCTTCGCCACTTTGGAGAGTGGTT...TGCAAGCCTGAGAACTGTAATTTGAATCACCAGAAGCTGCCAAAAAGCCAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR-3UTR CCA 90 bp GTGTGTGTGTCTGAGGTGGTTGTCAGGATTCAGTCTCCATTGTTCTCCATCTTATGTTTCTTGGTTGTCTaGGTTAGAATGGCCAGTAAT +
Preference number: 2 (lower is better)
Translates to: VCVSEVVVRIQSPLFSILCFLVV*VRMASN
Trigger: ATTACTGGCCATTCTAACCCAGACAACCAAGAAACA...TAAGATGGAGAACAATGGAGACTGAATCCTGACAACCACCTCAGACACACACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR-3UTR CCA 90 bp AGTATTTTCACCAAGATACAAACTGGCGAAAATTCAAAGAACCAGAGCCTGTCATCAAATGCACAGGCTTaGTGTCTGATTGCCACTCGT +
Preference number: 2 (lower is better)
Translates to: SIFTKIQTGENSKNQSLSSNAQA*CLIATR
Trigger: ACGAGTGGCAATCAGACACCAAGCCTGTGCATTTGA...TGACAGGCTCTGGTTCTTTGAATTTTCGCCAGTTTGTATCTTGGTGAAAATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR CAA 90 bp CTATGCATGCCTTTAACTGTGTACTGTGTACTTCAAGTGACAATTTaGGTTTCTGTTGTATTTCTCGTGTGTGCGTGTGTGTGTGTGTCT +
Preference number: 2 (lower is better)
Translates to: LCMPLTVYCVLQVTI*VSVVFLVCACVCVS
Trigger: AGACACACACACACACGCACACACGAGAAATACAACAGAAACCAAAATTGTCACTTGAAGTACACAGTACACAGTTAAAGGCATGCATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR GCA 72 bp GGGGTCTGCAGCTGCTGCAGCTGTGCCAGCAGACACTaGATGAGACCTTTGCTCCGATTGGTGCTGGGCTTT +
Preference number: 3 (lower is better)
Translates to: GVCSCCSCASRH*MRPLLRLVLGF
Trigger: AAAGCCCAGCACCAATCGGAGCAAAGGTCTCATGCAGTGTCTGCTGGCACAGCTGCAGCAGCTGCAGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR GCA 72 bp TGGAAGCCATGCAGGGTCAGGGCAGGGTCAGCTCGATaGCTGGGCCCTCCATTTCAGAATCACCCTGAAGGA +
Preference number: 3 (lower is better)
Translates to: WKPCRVRAGSAR*LGPPFQNHPEG
Trigger: TCCTTCAGGGTGATTCTGAAATGGAGGGCCCAGGCATCGAGCTGACCCTGCCCTGACCCTGCATGGCTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR CCA 72 bp AGCCATGCAGGGTCAGGGCAGGGTCAGCTCGATGCCTaGGCCCTCCATTTCAGAATCACCCTGAAGGAATGC +
Preference number: 3 (lower is better)
Translates to: SHAGSGQGQLDA*ALHFRITLKEC
Trigger: GCATTCCTTCAGGGTGATTCTGAAATGGAGGGCCCAGGCATCGAGCTGACCCTGCCCTGACCCTGCATGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR TCA 72 bp CTCTGGCCTAGGGAAGTGTGTGAAAGAAGCCGTAGCTaGGGATGCAGAGGAGGGTGTGGAAGCCATGCAGGG +
Preference number: 3 (lower is better)
Translates to: LWPREVCERSRS*GCRGGCGSHAG
Trigger: CCCTGCATGGCTTCCACACCCTCCTCTGCATCCTCAGCTACGGCTTCTTTCACACACTTCCCTAGGCCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR GCA 72 bp ACAGCAAAGGAGAGACTTACAAACTCCTGGCCCTCGTaGCTTGACTCCTCAGAGCAGGGATTTCAGGTGTGG +
Preference number: 3 (lower is better)
Translates to: TAKERLTNSWPS*LDSSEQGFQVW
Trigger: CCACACCTGAAATCCCTGCTCTGAGGAGTCAAGGCACGAGGGCCAGGAGTTTGTAAGTCTCTCCTTTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR GCA 72 bp GCCTGGGCCCTCCATTTCAGAATCACCCTGAAGGAATaGAAGCTCACACAATGTTCTGTGTGGACCCCTCAC +
Preference number: 3 (lower is better)
Translates to: AWALHFRITLKE*KLTQCSVWTPH
Trigger: GTGAGGGGTCCACACAGAACATTGTGTGAGCTTGCATTCCTTCAGGGTGATTCTGAAATGGAGGGCCCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR CCA 72 bp AGGCGGACCCCTTTGGACAGGCGAGCCCTCTACCATTaGAACATGAAGACTTTAGTCAGTGTGAGTGCGTGT +
Preference number: 3 (lower is better)
Translates to: RRTPLDRRALYH*NMKTLVSVSAC
Trigger: ACACGCACTCACACTGACTAAAGTCTTCATGTTCCAATGGTAGAGGGCTCGCCTGTCCAAAGGGGTCCGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR CCA 72 bp ACCCTGAAGGAATGCAAGCTCACACAATGTTCTGTGTaGACCCCTCACTGTGTAGGCGGACCCCTTTGGACA +
Preference number: 3 (lower is better)
Translates to: TLKECKLTQCSV*TPHCVGGPLWT
Trigger: TGTCCAAAGGGGTCCGCCTACACAGTGAGGGGTCCACACAGAACATTGTGTGAGCTTGCATTCCTTCAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR CCA 72 bp TGGAACTACACAGCAAAGGAGAGACTTACAAACTCCTaGCCCTCGTGCCTTGACTCCTCAGAGCAGGGATTT +
Preference number: 3 (lower is better)
Translates to: WNYTAKERLTNS*PSCLDSSEQGF
Trigger: AAATCCCTGCTCTGAGGAGTCAAGGCACGAGGGCCAGGAGTTTGTAAGTCTCTCCTTTGCTGTGTAGTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR-3UTR CAA 90 bp TGGAACTACACAGCAAAGGAGAGACTTACAAACTCCTGGCCCTCGTGCCTTGACAAATTTAGACAAAAGTaGGTGCTGCTGTGGCGCAGG +
Preference number: 3 (lower is better)
Translates to: WNYTAKERLTNSWPSCLDKFRQK*VLLWRR
Trigger: CCTGCGCCACAGCAGCACCAACTTTTGTCTAAATTT...GTCAAGGCACGAGGGCCAGGAGTTTGTAAGTCTCTCCTTTGCTGTGTAGTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR TCA 72 bp GGATTCAGTCTCCATTGTTCTCCATCTTATATTCGCTaGGGCAGGGTCTCTCAACTGAACCCAGAGCGTGCT +
Preference number: 3 (lower is better)
Translates to: GFSLHCSPSYIR*GRVSQLNPERA
Trigger: AGCACGCTCTGGGTTCAGTTGAGAGACCCTGCCTCAGCGAATATAAGATGGAGAACAATGGAGACTGAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR GCA 72 bp CAGGGTCTCTCAACTGAACCCAGAGCGTGCTATATTTaGTCATACAGTGCCCATCTGGCTTTTTGGCAGCTT +
Preference number: 3 (lower is better)
Translates to: QGLSTEPRACYI*SYSAHLAFWQL
Trigger: AAGCTGCCAAAAAGCCAGATGGGCACTGTATGAGCAAATATAGCACGCTCTGGGTTCAGTTGAGAGACCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR TCA 72 bp GACCTCCAGTTGTTTGGGCCCAGGCTACATAGATCCTaGTTCCTTGTTTCTTGGTTGTCTGGGTTAGAATGG +
Preference number: 3 (lower is better)
Translates to: DLQLFGPRLHRS*FLVSWLSGLEW
Trigger: CCATTCTAACCCAGACAACCAAGAAACAAGGAATCAGGATCTATGTAGCCTGGGCCCAAACAACTGGAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR TCA 72 bp CTGTGCTATCTCCCCAGTGTCTGCTGGGCATTTGTTTaGGATAGACTCTCCTTATGTAGCTCAGGTTTGCCT +
Preference number: 3 (lower is better)
Translates to: LCYLPSVCWAFV*DRLSLCSSGLP
Trigger: AGGCAAACCTGAGCTACATAAGGAGAGTCTATCTCAAACAAATGCCCAGCAGACACTGGGGAGATAGCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR-3UTR CAA 90 bp TGGAACTACACAGCAAAGGAGAGACTTACAAACTCCTGGCCCTCGTGCCTTGACCTGATTCCTTGTTTCTaGGTTGTCTGGGTTAGAATG +
Preference number: 3 (lower is better)
Translates to: WNYTAKERLTNSWPSCLDLIPCF*VVWVRM
Trigger: CATTCTAACCCAGACAACCAAGAAACAAGGAATCAG...GTCAAGGCACGAGGGCCAGGAGTTTGTAAGTCTCTCCTTTGCTGTGTAGTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR-3UTR CAA 90 bp TGGAACTACACAGCAAAGGAGAGACTTACAAACTCCTGGCCCTCGTGCCTTGACATAGATCCTGATTCCTaGTTTCTTGGTTGTCTGGGT +
Preference number: 3 (lower is better)
Translates to: WNYTAKERLTNSWPSCLDIDPDS*FLGCLG
Trigger: ACCCAGACAACCAAGAAACAAGGAATCAGGATCTAT...GTCAAGGCACGAGGGCCAGGAGTTTGTAAGTCTCTCCTTTGCTGTGTAGTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR TCA 72 bp TGTTGTATTTCTCGTGTGTGCGTGTGTGTGTGTGTCTaGGGTGGTTGTCAGGATTCAGTCTCCATTGTTCTC +
Preference number: 3 (lower is better)
Translates to: CCISRVCVCVCV*GGCQDSVSIVL
Trigger: GAGAACAATGGAGACTGAATCCTGACAACCACCTCAGACACACACACACACGCACACACGAGAAATACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR-3UTR CAA 90 bp GCCCATCTGGCTTTTTGGCAGCTTCTGGTGATTCAAATTACAGTTCTCAGGCTTTTGCTATATTACCCATaGCTCGCTCTTCTATCTCGG +
Preference number: 3 (lower is better)
Translates to: AHLAFWQLLVIQITVLRLLLYYP*LALLSR
Trigger: CCGAGATAGAAGAGCGAGCAATGGGTAATATAGCAA...AAGCCTGAGAACTGTAATTTGAATCACCAGAAGCTGCCAAAAAGCCAGATGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR GCA 72 bp CGCCTAGCATTACTTCAGTTTTCTGAGACTGGGTTTTaGTATATTACCCATTGCTCGCTCTTCTATCTCGGC +
Preference number: 3 (lower is better)
Translates to: RLALLQFSETGF*YITHCSLFYLG
Trigger: GCCGAGATAGAAGAGCGAGCAATGGGTAATATAGCAAAACCCAGTCTCAGAAAACTGAAGTAATGCTAGGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR-3UTR CAA 90 bp CATCTGGCTTTTTGGCAGCTTCTGGTGATTCAAATTACAGTTCTCAGGCTTGCATTCCTTGTTTCTTGGTaGTCTGGGTTAGAATGGCCA +
Preference number: 3 (lower is better)
Translates to: HLAFWQLLVIQITVLRLAFLVSW*SGLEWP
Trigger: TGGCCATTCTAACCCAGACAACCAAGAAACAAGGAA...TGCAAGCCTGAGAACTGTAATTTGAATCACCAGAAGCTGCCAAAAAGCCAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR TCA 72 bp TTCAAGGTAAGCAAAGGACAGGAGCAGATCGGCAAATaGACCATCAGATCCGGTTTTGCAAGTATTTTCACC +
Preference number: 3 (lower is better)
Translates to: FKVSKGQEQIGK*TIRSGFASIFT
Trigger: GGTGAAAATACTTGCAAAACCGGATCTGATGGTTCATTTGCCGATCTGCTCCTGTCCTTTGCTTACCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR GCA 72 bp GGAGCAGATCGGCAAATGAACCATCAGATCCGGTTTTaGAAGTATTTTCACCAAGATACAAACTGGCGAAAA +
Preference number: 3 (lower is better)
Translates to: GADRQMNHQIRF*KYFHQDTNWRK
Trigger: TTTTCGCCAGTTTGTATCTTGGTGAAAATACTTGCAAAACCGGATCTGATGGTTCATTTGCCGATCTGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR GCA 72 bp TTGTTTGAGATAGACTCTCCTTATGTAGCTCAGGTTTaGCTGGAACTACACAGCAAAGGAGAGACTTACAAA +
Preference number: 3 (lower is better)
Translates to: LFEIDSPYVAQV*LELHSKGETYK
Trigger: TTTGTAAGTCTCTCCTTTGCTGTGTAGTTCCAGGCAAACCTGAGCTACATAAGGAGAGTCTATCTCAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR TCA 90 bp CTTACAAACTCCTGGCCCTCGTGCCTTGACTCCTCAGAGCAGGGATTTCAGGTGCTGAGCTGCTGCTGCTaGGTCCAGAGGAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LTNSWPSCLDSSEQGFQVLSCCC*VQRSRA
Trigger: AGCCCTGCTCCTCTGGACTCAGCAGCAGCAGCTCAG...CACCTGAAATCCCTGCTCTGAGGAGTCAAGGCACGAGGGCCAGGAGTTTGTAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR GCA 90 bp TGGAACTACACAGCAAAGGAGAGACTTACAAACTCCTGGCCCTCGTGCCTTGACGTGCTGTCATCCGGCTaGAGCGCGCGGAGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: WNYTAKERLTNSWPSCLDVLSSG*SARSLA
Trigger: TGCCAGGCTCCGCGCGCTGCAGCCGGATGACAGCAC...GTCAAGGCACGAGGGCCAGGAGTTTGTAAGTCTCTCCTTTGCTGTGTAGTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR GCA 90 bp CTTACAAACTCCTGGCCCTCGTGCCTTGACTCCTCAGAGCAGGGATTTCAGGTGGCCTGGAGAGTCGGGTaGTCTGCAGACTGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LTNSWPSCLDSSEQGFQVAWRVG*SADCRA
Trigger: AGCCCTGCAGTCTGCAGAGCACCCGACTCTCCAGGC...CACCTGAAATCCCTGCTCTGAGGAGTCAAGGCACGAGGGCCAGGAGTTTGTAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR GCA 90 bp AAGCTCACACAATGTTCTGTGTGGACCCCTCACTGTGTAGGCGGACCCCTTTGGCGGAACGGAGAGGGCTaGGGCAGATCTGATGCGCAC +
Preference number: 4 (lower is better)
Translates to: KLTQCSVWTPHCVGGPLWRNGEG*GRSDAH
Trigger: GTGCGCATCAGATCTGCCGCAGCCCTCTCCGTTCCG...CCAAAGGGGTCCGCCTACACAGTGAGGGGTCCACACAGAACATTGTGTGAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR TCA 90 bp TTACAAACTCCTGGCCCTCGTGCCTTGACTCCTCAGAGCAGGGATTTCAGGTGTGAGGTGAGGGGTTGCTaGGCTGCTGCTGCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: LQTPGPRALTPQSRDFRCEVRGC*AAAAES
Trigger: GGACTCAGCAGCAGCAGCTCAGCAACCCCTCACCTC...ACACCTGAAATCCCTGCTCTGAGGAGTCAAGGCACGAGGGCCAGGAGTTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR TCA 90 bp CTTACAAACTCCTGGCCCTCGTGCCTTGACTCCTCAGAGCAGGGATTTCAGGTGGAGGGCTGGAGAAAATaGAGCAGGTTCCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LTNSWPSCLDSSEQGFQVEGWRK*SRFPRA
Trigger: GGCCCTGGGGAACCTGCTTCATTTTCTCCAGCCCTC...CACCTGAAATCCCTGCTCTGAGGAGTCAAGGCACGAGGGCCAGGAGTTTGTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CCA 90 bp TGGAACTACACAGCAAAGGAGAGACTTACAAACTCCTGGCCCTCGTGCCTTGACTCCACAGGCAAACCCTaGGAGCCCCACGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: WNYTAKERLTNSWPSCLDSTGKP*EPHGEE
Trigger: CTCCTCCCCGTGGGGCTCCCAGGGTTTGCCTGTGGA...GTCAAGGCACGAGGGCCAGGAGTTTGTAAGTCTCTCCTTTGCTGTGTAGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CCA 90 bp AAGCTCACACAATGTTCTGTGTGGACCCCTCACTGTGTAGGCGGACCCCTTTGGGGGCTCCTCCAAGTATaGCTGTCCTGGCACACTGAG +
Preference number: 4 (lower is better)
Translates to: KLTQCSVWTPHCVGGPLWGLLQV*LSWHTE
Trigger: CTCAGTGTGCCAGGACAGCCATACTTGGAGGAGCCC...CCAAAGGGGTCCGCCTACACAGTGAGGGGTCCACACAGAACATTGTGTGAGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CCA 90 bp TTACAAACTCCTGGCCCTCGTGCCTTGACTCCTCAGAGCAGGGATTTCAGGTGTGAGCCTCCAGCCGCATaGGGGATGGTTCATAGGTGC +
Preference number: 4 (lower is better)
Translates to: LQTPGPRALTPQSRDFRCEPPAA*GMVHRC
Trigger: GCACCTATGAACCATCCCCCATGCGGCTGGAGGCTC...ACACCTGAAATCCCTGCTCTGAGGAGTCAAGGCACGAGGGCCAGGAGTTTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CCA 90 bp AAGCTCACACAATGTTCTGTGTGGACCCCTCACTGTGTAGGCGGACCCCTTTGGAGACTCCAAGGGCCCTaGAGGTGGCGGCTTTCACTA +
Preference number: 4 (lower is better)
Translates to: KLTQCSVWTPHCVGGPLWRLQGP*RWRLSL
Trigger: TAGTGAAAGCCGCCACCTCCAGGGCCCTTGGAGTCT...CCAAAGGGGTCCGCCTACACAGTGAGGGGTCCACACAGAACATTGTGTGAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR CAA 72 bp TTCTGTGTGGACCCCTCACTGTGTAGGCGGACCCCTTaGGACAGGCGAGCCCTCTACCATTGGAACATGAAG +
Preference number: 4 (lower is better)
Translates to: FCVDPSLCRRTP*DRRALYHWNMK
Trigger: CTTCATGTTCCAATGGTAGAGGGCTCGCCTGTCCAAAGGGGTCCGCCTACACAGTGAGGGGTCCACACAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR TCA 90 bp CTTACAAACTCCTGGCCCTCGTGCCTTGACTCCTCAGAGCAGGGATTTCAGGTGCCTCTAAGAATCCCATaGTGGCCCCTCTGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: LTNSWPSCLDSSEQGFQVPLRIP*WPLWLC
Trigger: ACACAGCCAGAGGGGCCATCATGGGATTCTTAGAGG...CACCTGAAATCCCTGCTCTGAGGAGTCAAGGCACGAGGGCCAGGAGTTTGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CCA 90 bp TTACAAACTCCTGGCCCTCGTGCCTTGACTCCTCAGAGCAGGGATTTCAGGTGTCAGCCGCATGGGGGATaGTTCATAGGTGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: LQTPGPRALTPQSRDFRCQPHGG*FIGASQ
Trigger: CTGGGAAGCACCTATGAACCATCCCCCATGCGGCTG...ACACCTGAAATCCCTGCTCTGAGGAGTCAAGGCACGAGGGCCAGGAGTTTGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CCA 90 bp AATCACCCTGAAGGAATGCAAGCTCACACAATGTTCTGTGTGGACCCCTCACTGTCACAGGCGCTCGCCTaGAGAGTCGGGTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: NHPEGMQAHTMFCVDPSLSQALA*RVGCSA
Trigger: TGCAGAGCACCCGACTCTCCAGGCGAGCGCCTGTGA...CAGTGAGGGGTCCACACAGAACATTGTGTGAGCTTGCATTCCTTCAGGGTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CCA 90 bp TGGAACTACACAGCAAAGGAGAGACTTACAAACTCCTGGCCCTCGTGCCTTGACCTGGACTCTTTCCTGTaGGGTGTGGACTGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: WNYTAKERLTNSWPSCLDLDSFL*GVDCSG
Trigger: CCCGGAGCAGTCCACACCCCACAGGAAAGAGTCCAG...GTCAAGGCACGAGGGCCAGGAGTTTGTAAGTCTCTCCTTTGCTGTGTAGTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR TCA 90 bp TGGAACTACACAGCAAAGGAGAGACTTACAAACTCCTGGCCCTCGTGCCTTGACTGGTCGAAGAGCAGGTaGATCTCCATGCGGGACACG +
Preference number: 4 (lower is better)
Translates to: WNYTAKERLTNSWPSCLDWSKSR*ISMRDT
Trigger: CGTGTCCCGCATGGAGATTCACCTGCTCTTCGACCA...GTCAAGGCACGAGGGCCAGGAGTTTGTAAGTCTCTCCTTTGCTGTGTAGTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR TCA 90 bp AATCACCCTGAAGGAATGCAAGCTCACACAATGTTCTGTGTGGACCCCTCACTGTCAGGAGTGCTGAGGTaGGGGGTTGCTGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: NHPEGMQAHTMFCVDPSLSGVLR*GVAELL
Trigger: CAGCAGCTCAGCAACCCCTCACCTCAGCACTCCTGA...CAGTGAGGGGTCCACACAGAACATTGTGTGAGCTTGCATTCCTTCAGGGTGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR TCA 90 bp TTACAAACTCCTGGCCCTCGTGCCTTGACTCCTCAGAGCAGGGATTTCAGGTGTACCCCTTTGGTGAGCTaGGCGATGCTTCTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: LQTPGPRALTPQSRDFRCTPLVS*AMLLPE
Trigger: CTCTGGAAGAAGCATCGCTCAGCTCACCAAAGGGGT...ACACCTGAAATCCCTGCTCTGAGGAGTCAAGGCACGAGGGCCAGGAGTTTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR TCA 90 bp AAGCTCACACAATGTTCTGTGTGGACCCCTCACTGTGTAGGCGGACCCCTTTGGGTACAACTGAGCCGTTaGAAAATAGCCCCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: KLTQCSVWTPHCVGGPLWVQLSR*KIAPRQ
Trigger: CTGGCGAGGGGCTATTTTTCAACGGCTCAGTTGTAC...CCAAAGGGGTCCGCCTACACAGTGAGGGGTCCACACAGAACATTGTGTGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR TCA 90 bp GCCCATCTGGCTTTTTGGCAGCTTCTGGTGATTCAAATTACAGTTCTCAGGCTTAGCGCCTGGCAGATGTaGGTCCGCAGGCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: AHLAFWQLLVIQITVLRLSAWQM*VRRLAQ
Trigger: CTGTGCCAGCCTGCGGACTCACATCTGCCAGGCGCT...AAGCCTGAGAACTGTAATTTGAATCACCAGAAGCTGCCAAAAAGCCAGATGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR GCA 90 bp CTACCATTGGAACATGAAGACTTTAGTCAGTGTGAGTGCGTGTTCACCAGTCACCGGAACCCATCGTCCTaGTCCGGCGACAGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: LPLEHEDFSQCECVFTSHRNPSS*SGDSSR
Trigger: GCGGGAACTGTCGCCGGAGCAGGACGATGGGTTCCG...GTGACTGGTGAACACGCACTCACACTGACTAAAGTCTTCATGTTCCAATGGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR GCA 90 bp AATCACCCTGAAGGAATGCAAGCTCACACAATGTTCTGTGTGGACCCCTCACTGGCTGAGCCCTGGTGCTaGTTCCACTTCACCACAGGG +
Preference number: 4 (lower is better)
Translates to: NHPEGMQAHTMFCVDPSLAEPWC*FHFTTG
Trigger: CCCTGTGGTGAAGTGGAAGCAGCACCAGGGCTCAGC...CAGTGAGGGGTCCACACAGAACATTGTGTGAGCTTGCATTCCTTCAGGGTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR GCA 90 bp TTACAAACTCCTGGCCCTCGTGCCTTGACTCCTCAGAGCAGGGATTTCAGGTGTCATGCTGAGCCCTGGTaGTGCTTCCACTTCACCACA +
Preference number: 4 (lower is better)
Translates to: LQTPGPRALTPQSRDFRCHAEPW*CFHFTT
Trigger: TGTGGTGAAGTGGAAGCAGCACCAGGGCTCAGCATG...ACACCTGAAATCCCTGCTCTGAGGAGTCAAGGCACGAGGGCCAGGAGTTTGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CCA 90 bp TGGAACTACACAGCAAAGGAGAGACTTACAAACTCCTGGCCCTCGTGCCTTGACAGGCCTCTGGCAAGATaGAGGACAGGGCATCACAGG +
Preference number: 4 (lower is better)
Translates to: WNYTAKERLTNSWPSCLDRPLAR*RTGHHR
Trigger: CCTGTGATGCCCTGTCCTCCATCTTGCCAGAGGCCT...GTCAAGGCACGAGGGCCAGGAGTTTGTAAGTCTCTCCTTTGCTGTGTAGTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR CAA 72 bp CAAAGGAGAGACTTACAAACTCCTGGCCCTCGTGCCTaGACTCCTCAGAGCAGGGATTTCAGGTGTGGACTG +
Preference number: 4 (lower is better)
Translates to: QRRDLQTPGPRA*TPQSRDFRCGL
Trigger: CAGTCCACACCTGAAATCCCTGCTCTGAGGAGTCAAGGCACGAGGGCCAGGAGTTTGTAAGTCTCTCCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR TCA 90 bp GCCCATCTGGCTTTTTGGCAGCTTCTGGTGATTCAAATTACAGTTCTCAGGCTTTCGCCTGGTCCATGCTaGGCCCTGGTGCTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: AHLAFWQLLVIQITVLRLSPGPC*ALVLLP
Trigger: TGGAAGCAGCACCAGGGCTCAGCATGGACCAGGCGA...AAGCCTGAGAACTGTAATTTGAATCACCAGAAGCTGCCAAAAAGCCAGATGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR TCA 90 bp GTGGTTGTCAGGATTCAGTCTCCATTGTTCTCCATCTTATATTCGCTGAGGCAGGCCAGCATCGCTACCTaGGCAGGAGTCCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: VVVRIQSPLFSILYSLRQASIAT*AGVLLG
Trigger: CCCAAGGAGGACTCCTGCTCAGGTAGCGATGCTGGC...CTGCCTCAGCGAATATAAGATGGAGAACAATGGAGACTGAATCCTGACAACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CCA 90 bp TTACAAACTCCTGGCCCTCGTGCCTTGACTCCTCAGAGCAGGGATTTCAGGTGTGTGGATTCTGGCTGCTaGGGTTTAACAGGAGATCGC +
Preference number: 4 (lower is better)
Translates to: LQTPGPRALTPQSRDFRCVDSGC*GLTGDR
Trigger: GCGATCTCCTGTTAAACCCCAGCAGCCAGAATCCAC...ACACCTGAAATCCCTGCTCTGAGGAGTCAAGGCACGAGGGCCAGGAGTTTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR TCA 90 bp GTCAGGATTCAGTCTCCATTGTTCTCCATCTTATATTCGCTGAGGCAGGGTCTCCTGACTCACTGCTGCTaGCTCTCTTCCAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: VRIQSPLFSILYSLRQGLLTHCC*LSSSWR
Trigger: CCTCCAGCTGGAAGAGAGTCAGCAGCAGTGAGTCAG...GAGACCCTGCCTCAGCGAATATAAGATGGAGAACAATGGAGACTGAATCCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR TCA 90 bp GTCAGGATTCAGTCTCCATTGTTCTCCATCTTATATTCGCTGAGGCAGGGTCTCGAGGAGCAGGGCTGTTaGAGAAGCAGCTGGACTTCC +
Preference number: 4 (lower is better)
Translates to: VRIQSPLFSILYSLRQGLEEQGC*RSSWTS
Trigger: GGAAGTCCAGCTGCTTCTTCAACAGCCCTGCTCCTC...GAGACCCTGCCTCAGCGAATATAAGATGGAGAACAATGGAGACTGAATCCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR TCA 90 bp TTACAAACTCCTGGCCCTCGTGCCTTGACTCCTCAGAGCAGGGATTTCAGGTGTGGACCGCATTGCTTTTaGCCTTGTCTTTGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: LQTPGPRALTPQSRDFRCGPHCF*PCLCLW
Trigger: CCACAGACAAAGACAAGGTCAAAAGCAATGCGGTCC...ACACCTGAAATCCCTGCTCTGAGGAGTCAAGGCACGAGGGCCAGGAGTTTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR GCA 90 bp AAGCTCACACAATGTTCTGTGTGGACCCCTCACTGTGTAGGCGGACCCCTTTGGGCAGTAAACCAGAGCTaGCAGGGCTTGAAGAATTTC +
Preference number: 4 (lower is better)
Translates to: KLTQCSVWTPHCVGGPLWAVNQS*QGLKNF
Trigger: GAAATTCTTCAAGCCCTGGCAGCTCTGGTTTACTGC...CCAAAGGGGTCCGCCTACACAGTGAGGGGTCCACACAGAACATTGTGTGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR GCA 90 bp GTGGTTGTCAGGATTCAGTCTCCATTGTTCTCCATCTTATATTCGCTGAGGCAGCCCAGGTGCTCGGTCTaGGTCAGCCTCATCTTCCCA +
Preference number: 4 (lower is better)
Translates to: VVVRIQSPLFSILYSLRQPRCSV*VSLIFP
Trigger: TGGGAAGATGAGGCTGACGCAGACCGAGCACCTGGG...CTGCCTCAGCGAATATAAGATGGAGAACAATGGAGACTGAATCCTGACAACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CCA 90 bp AATCACCCTGAAGGAATGCAAGCTCACACAATGTTCTGTGTGGACCCCTCACTGCGCCGTGGAGCTGAATaGATGGGTTTGCCTCACACA +
Preference number: 4 (lower is better)
Translates to: NHPEGMQAHTMFCVDPSLRRGAE*MGLPHT
Trigger: TGTGTGAGGCAAACCCATCCATTCAGCTCCACGGCG...CAGTGAGGGGTCCACACAGAACATTGTGTGAGCTTGCATTCCTTCAGGGTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR TCA 90 bp TGGAACTACACAGCAAAGGAGAGACTTACAAACTCCTGGCCCTCGTGCCTTGACGATCGCCCATCATACTaGGGAAGTGGAGTTGGGTAT +
Preference number: 4 (lower is better)
Translates to: WNYTAKERLTNSWPSCLDDRPSY*GSGVGY
Trigger: ATACCCAACTCCACTTCCTCAGTATGATGGGCGATC...GTCAAGGCACGAGGGCCAGGAGTTTGTAAGTCTCTCCTTTGCTGTGTAGTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR TCA 90 bp CTACCATTGGAACATGAAGACTTTAGTCAGTGTGAGTGCGTGTTCACCAGTCACATGGCAGACAGGACTTaGAGAGCACAGGCACGGGTC +
Preference number: 4 (lower is better)
Translates to: LPLEHEDFSQCECVFTSHMADRT*RAQARV
Trigger: GACCCGTGCCTGTGCTCTTCAAGTCCTGTCTGCCAT...GTGACTGGTGAACACGCACTCACACTGACTAAAGTCTTCATGTTCCAATGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR TCA 90 bp CTACCATTGGAACATGAAGACTTTAGTCAGTGTGAGTGCGTGTTCACCAGTCACAAATGCAGAGTCGGATaGGCCAGCAGGGCTCCGATG +
Preference number: 4 (lower is better)
Translates to: LPLEHEDFSQCECVFTSHKCRVG*ASRAPM
Trigger: CATCGGAGCCCTGCTGGCTCATCCGACTCTGCATTT...GTGACTGGTGAACACGCACTCACACTGACTAAAGTCTTCATGTTCCAATGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR GCA 90 bp TGGAACTACACAGCAAAGGAGAGACTTACAAACTCCTGGCCCTCGTGCCTTGACTGCCATACAGTGTACTaGAGCTCTCCTGACTTCAGG +
Preference number: 4 (lower is better)
Translates to: WNYTAKERLTNSWPSCLDCHTVY*SSPDFR
Trigger: CCTGAAGTCAGGAGAGCTGCAGTACACTGTATGGCA...GTCAAGGCACGAGGGCCAGGAGTTTGTAAGTCTCTCCTTTGCTGTGTAGTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CCA 90 bp GTGTGTGTGTCTGAGGTGGTTGTCAGGATTCAGTCTCCATTGTTCTCCATCTTAGTCCATGCTGAGCCCTaGTGCTGCTTCCACTTCACC +
Preference number: 4 (lower is better)
Translates to: VCVSEVVVRIQSPLFSILVHAEP*CCFHFT
Trigger: GGTGAAGTGGAAGCAGCACCAGGGCTCAGCATGGAC...TAAGATGGAGAACAATGGAGACTGAATCCTGACAACCACCTCAGACACACACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CCA 90 bp GCCCATCTGGCTTTTTGGCAGCTTCTGGTGATTCAAATTACAGTTCTCAGGCTTCCACTCACATTCGCCTaGTCCATGCTGAGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: AHLAFWQLLVIQITVLRLPLTFA*SMLSPG
Trigger: ACCAGGGCTCAGCATGGACCAGGCGAATGTGAGTGG...AAGCCTGAGAACTGTAATTTGAATCACCAGAAGCTGCCAAAAAGCCAGATGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CCA 90 bp GTGGTTGTCAGGATTCAGTCTCCATTGTTCTCCATCTTATATTCGCTGAGGCAGACTGCTGAAGGCCTCTaGCAAGATGGAGGACAGGGC +
Preference number: 4 (lower is better)
Translates to: VVVRIQSPLFSILYSLRQTAEGL*QDGGQG
Trigger: GCCCTGTCCTCCATCTTGCCAGAGGCCTTCAGCAGT...CTGCCTCAGCGAATATAAGATGGAGAACAATGGAGACTGAATCCTGACAACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR TCA 90 bp GTGTGTGTGTCTGAGGTGGTTGTCAGGATTCAGTCTCCATTGTTCTCCATCTTAGTACTGCAGCTCTCCTaGCTTCAGGGTCAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: VCVSEVVVRIQSPLFSILVLQLS*LQGQSE
Trigger: CTCACTCTGACCCTGAAGTCAGGAGAGCTGCAGTAC...TAAGATGGAGAACAATGGAGACTGAATCCTGACAACCACCTCAGACACACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR TCA 90 bp GTGGTTGTCAGGATTCAGTCTCCATTGTTCTCCATCTTATATTCGCTGAGGCAGTCCGGCAAAGGAGCGTaGGTGGACACTATAGCTCCT +
Preference number: 4 (lower is better)
Translates to: VVVRIQSPLFSILYSLRQSGKGA*VDTIAP
Trigger: AGGAGCTATAGTGTCCACTCACGCTCCTTTGCCGGA...CTGCCTCAGCGAATATAAGATGGAGAACAATGGAGACTGAATCCTGACAACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR GCA 90 bp CTTACAAACTCCTGGCCCTCGTGCCTTGACTCCTCAGAGCAGGGATTTCAGGTGTCAGTTGACACACTTTaGTCACAAGGTGATTCTGGT +
Preference number: 4 (lower is better)
Translates to: LTNSWPSCLDSSEQGFQVSVDTL*SQGDSG
Trigger: ACCAGAATCACCTTGTGAGCAAAGTGTGTCAACTGA...CACCTGAAATCCCTGCTCTGAGGAGTCAAGGCACGAGGGCCAGGAGTTTGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR GCA 90 bp GCCCATCTGGCTTTTTGGCAGCTTCTGGTGATTCAAATTACAGTTCTCAGGCTTTGCACTCTGTGTATGTaGTTCAGGGCCACTCGGACC +
Preference number: 4 (lower is better)
Translates to: AHLAFWQLLVIQITVLRLCTLCM*FRATRT
Trigger: GGTCCGAGTGGCCCTGAAGCACATACACAGAGTGCA...AAGCCTGAGAACTGTAATTTGAATCACCAGAAGCTGCCAAAAAGCCAGATGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CCA 90 bp CATCTGGCTTTTTGGCAGCTTCTGGTGATTCAAATTACAGTTCTCAGGCTTGCACTTTCCTGTGGGGTGTaGACTGCTCCGGGGTCATCT +
Preference number: 4 (lower is better)
Translates to: HLAFWQLLVIQITVLRLALSCGV*TAPGSS
Trigger: AGATGACCCCGGAGCAGTCCACACCCCACAGGAAAG...TGCAAGCCTGAGAACTGTAATTTGAATCACCAGAAGCTGCCAAAAAGCCAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR TCA 90 bp GTGGTTGTCAGGATTCAGTCTCCATTGTTCTCCATCTTATATTCGCTGAGGCAGTGTAGTTCTCGGAGATaGGCTGGTCGAAGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: VVVRIQSPLFSILYSLRQCSSRR*AGRRAG
Trigger: ACCTGCTCTTCGACCAGCTCATCTCCGAGAACTACA...CTGCCTCAGCGAATATAAGATGGAGAACAATGGAGACTGAATCCTGACAACCAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR TCA 90 bp GTCAGGATTCAGTCTCCATTGTTCTCCATCTTATATTCGCTGAGGCAGGGTCTCAGAGCTGCCAGGGCTTaGAGAATTTCCATGTGTGTC +
Preference number: 4 (lower is better)
Translates to: VRIQSPLFSILYSLRQGLRAARA*RISMCV
Trigger: GACACACATGGAAATTCTTCAAGCCCTGGCAGCTCT...GAGACCCTGCCTCAGCGAATATAAGATGGAGAACAATGGAGACTGAATCCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR GCA 90 bp TGCAAGTATTTTCACCAAGATACAAACTGGCGAAAATTCAAAGAACCAGAGCCTGGGTGCTCTGCAGACTaGAGGGCTCGGGGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: CKYFHQDTNWRKFKEPEPGCSAD*RARGKG
Trigger: TCCTTTGCCCCGAGCCCTGCAGTCTGCAGAGCACCC...AGGCTCTGGTTCTTTGAATTTTCGCCAGTTTGTATCTTGGTGAAAATACTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CCA 90 bp GTGTGTGTGTCTGAGGTGGTTGTCAGGATTCAGTCTCCATTGTTCTCCATCTTACCCCTTGGCGAACCTTaGCCTGGTATGACCTCATTT +
Preference number: 4 (lower is better)
Translates to: VCVSEVVVRIQSPLFSILPLGEP*PGMTSF
Trigger: AAATGAGGTCATACCAGGCCAAGGTTCGCCAAGGGG...TAAGATGGAGAACAATGGAGACTGAATCCTGACAACCACCTCAGACACACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CCA 90 bp GTCAGGATTCAGTCTCCATTGTTCTCCATCTTATATTCGCTGAGGCAGGGTCTCGTGGAGCTGAATGGATaGGTTTGCCTCACACATGCA +
Preference number: 4 (lower is better)
Translates to: VRIQSPLFSILYSLRQGLVELNG*VCLTHA
Trigger: TGCATGTGTGAGGCAAACCCATCCATTCAGCTCCAC...GAGACCCTGCCTCAGCGAATATAAGATGGAGAACAATGGAGACTGAATCCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR CAA 72 bp TGTGTGTCTGAGGTGGTTGTCAGGATTCAGTCTCCATaGTTCTCCATCTTATATTCGCTGAGGCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: CVSEVVVRIQSP*FSILYSLRQGL
Trigger: GAGACCCTGCCTCAGCGAATATAAGATGGAGAACAATGGAGACTGAATCCTGACAACCACCTCAGACACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR TCA 90 bp GTCAGGATTCAGTCTCCATTGTTCTCCATCTTATATTCGCTGAGGCAGGGTCTCACTTTGCTCACAAGGTaGTTCTGGTTAAGAGGCACC +
Preference number: 4 (lower is better)
Translates to: VRIQSPLFSILYSLRQGLTLLTR*FWLRGT
Trigger: GGTGCCTCTTAACCAGAATCACCTTGTGAGCAAAGT...GAGACCCTGCCTCAGCGAATATAAGATGGAGAACAATGGAGACTGAATCCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR TCA 90 bp GTGGTTGTCAGGATTCAGTCTCCATTGTTCTCCATCTTATATTCGCTGAGGCAGGCTGTCCTGGCACACTaGGACATAAGTTTGCCATAC +
Preference number: 4 (lower is better)
Translates to: VVVRIQSPLFSILYSLRQAVLAH*DISLPY
Trigger: GTATGGCAAACTTATGTCTCAGTGTGCCAGGACAGC...CTGCCTCAGCGAATATAAGATGGAGAACAATGGAGACTGAATCCTGACAACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR TCA 90 bp AGTATTTTCACCAAGATACAAACTGGCGAAAATTCAAAGAACCAGAGCCTGTCAAGCCATCAGGAGTGCTaGGGTGAGGGGTTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SIFTKIQTGENSKNQSLSSHQEC*GEGLLS
Trigger: GCTCAGCAACCCCTCACCTCAGCACTCCTGATGGCT...TGACAGGCTCTGGTTCTTTGAATTTTCGCCAGTTTGTATCTTGGTGAAAATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR TCA 90 bp AGTATTTTCACCAAGATACAAACTGGCGAAAATTCAAAGAACCAGAGCCTGTCACGTTCGGCAGACTGCTaGAGGCCTCTGGCAAGATGG +
Preference number: 4 (lower is better)
Translates to: SIFTKIQTGENSKNQSLSRSADC*RPLARW
Trigger: CCATCTTGCCAGAGGCCTTCAGCAGTCTGCCGAACG...TGACAGGCTCTGGTTCTTTGAATTTTCGCCAGTTTGTATCTTGGTGAAAATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR GCA 90 bp CATCTGGCTTTTTGGCAGCTTCTGGTGATTCAAATTACAGTTCTCAGGCTTGCACTGCTGTATCAAGCCTaGACCCAGTTCTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: HLAFWQLLVIQITVLRLALLYQA*TQFFQE
Trigger: CTCCTGGAAGAACTGGGTGCAGGCTTGATACAGCAG...TGCAAGCCTGAGAACTGTAATTTGAATCACCAGAAGCTGCCAAAAAGCCAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR GCA 90 bp TGGAACTACACAGCAAAGGAGAGACTTACAAACTCCTGGCCCTCGTGCCTTGACAGCATTTGCTGTGTCTaGAACAAATATGACGTCCTG +
Preference number: 4 (lower is better)
Translates to: WNYTAKERLTNSWPSCLDSICCV*NKYDVL
Trigger: CAGGACGTCATATTTGTTGCAGACACAGCAAATGCT...GTCAAGGCACGAGGGCCAGGAGTTTGTAAGTCTCTCCTTTGCTGTGTAGTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CCA 90 bp CTACCATTGGAACATGAAGACTTTAGTCAGTGTGAGTGCGTGTTCACCAGTCACCCAGAGAACTCATCCTaGAAACTTGGGTCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: LPLEHEDFSQCECVFTSHPENSS*KLGSGV
Trigger: CACACCAGACCCAAGTTTCCAGGATGAGTTCTCTGG...GTGACTGGTGAACACGCACTCACACTGACTAAAGTCTTCATGTTCCAATGGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CCA 90 bp GCCCATCTGGCTTTTTGGCAGCTTCTGGTGATTCAAATTACAGTTCTCAGGCTTACTCCAGGAAGTCTGTaGTGTCTTCGCTCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: AHLAFWQLLVIQITVLRLTPGSL*CLRSSA
Trigger: TGCAGAAGAGCGAAGACACCACAGACTTCCTGGAGT...AAGCCTGAGAACTGTAATTTGAATCACCAGAAGCTGCCAAAAAGCCAGATGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR GCA 90 bp CTACCATTGGAACATGAAGACTTTAGTCAGTGTGAGTGCGTGTTCACCAGTCACGTAGTGGATTCTGGCTaGTGGGGTTTAACAGGAGAT +
Preference number: 4 (lower is better)
Translates to: LPLEHEDFSQCECVFTSHVVDSG*WGLTGD
Trigger: ATCTCCTGTTAAACCCCAGCAGCCAGAATCCACTAC...GTGACTGGTGAACACGCACTCACACTGACTAAAGTCTTCATGTTCCAATGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR GCA 90 bp AGTATTTTCACCAAGATACAAACTGGCGAAAATTCAAAGAACCAGAGCCTGTCAGTGTCTTCGCTCTTCTaGAGGGCAGTGACCAGCGCA +
Preference number: 4 (lower is better)
Translates to: SIFTKIQTGENSKNQSLSVSSLF*RAVTSA
Trigger: TGCGCTGGTCACTGCCCTGCAGAAGAGCGAAGACAC...TGACAGGCTCTGGTTCTTTGAATTTTCGCCAGTTTGTATCTTGGTGAAAATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CCA 90 bp GCCCATCTGGCTTTTTGGCAGCTTCTGGTGATTCAAATTACAGTTCTCAGGCTTTTGAGCCTTCCAAGATaGCAGACAGGACTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: AHLAFWQLLVIQITVLRLLSLPR*QTGLEE
Trigger: CTCTTCAAGTCCTGTCTGCCATCTTGGAAGGCTCAA...AAGCCTGAGAACTGTAATTTGAATCACCAGAAGCTGCCAAAAAGCCAGATGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CCA 90 bp CTACCATTGGAACATGAAGACTTTAGTCAGTGTGAGTGCGTGTTCACCAGTCACGCGGCTTTCACTAGATaGTTCTTGCTGTCATTCAGG +
Preference number: 4 (lower is better)
Translates to: LPLEHEDFSQCECVFTSHAAFTR*FLLSFR
Trigger: CCTGAATGACAGCAAGAACCATCTAGTGAAAGCCGC...GTGACTGGTGAACACGCACTCACACTGACTAAAGTCTTCATGTTCCAATGGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CCA 90 bp AGTATTTTCACCAAGATACAAACTGGCGAAAATTCAAAGAACCAGAGCCTGTCAGGGACCAGGCTGCTTTaGCGCGCACGTTTAGTGACT +
Preference number: 4 (lower is better)
Translates to: SIFTKIQTGENSKNQSLSGTRLL*RARLVT
Trigger: AGTCACTAAACGTGCGCGCCAAAGCAGCCTGGTCCC...TGACAGGCTCTGGTTCTTTGAATTTTCGCCAGTTTGTATCTTGGTGAAAATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CCA 90 bp GTCAGGATTCAGTCTCCATTGTTCTCCATCTTATATTCGCTGAGGCAGGGTCTCCTGGAAACTTGGGTCTaGTGTGTCCATGTTGACAAT +
Preference number: 4 (lower is better)
Translates to: VRIQSPLFSILYSLRQGLLETWV*CVHVDN
Trigger: ATTGTCAACATGGACACACCAGACCCAAGTTTCCAG...GAGACCCTGCCTCAGCGAATATAAGATGGAGAACAATGGAGACTGAATCCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CCA 90 bp GCCCATCTGGCTTTTTGGCAGCTTCTGGTGATTCAAATTACAGTTCTCAGGCTTCGGAGCTGTCCCAAGTaGAAGAGCAGGGTTTTTAAA +
Preference number: 4 (lower is better)
Translates to: AHLAFWQLLVIQITVLRLRSCPK*KSRVFK
Trigger: TTTAAAAACCCTGCTCTTCCACTTGGGACAGCTCCG...AAGCCTGAGAACTGTAATTTGAATCACCAGAAGCTGCCAAAAAGCCAGATGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CCA 90 bp AGTATTTTCACCAAGATACAAACTGGCGAAAATTCAAAGAACCAGAGCCTGTCAGCCACTCGGACCATCTaGACTCTTTCCTGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: SIFTKIQTGENSKNQSLSATRTI*TLSCGV
Trigger: CACCCCACAGGAAAGAGTCCAGATGGTCCGAGTGGC...TGACAGGCTCTGGTTCTTTGAATTTTCGCCAGTTTGTATCTTGGTGAAAATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR CAA 72 bp TTCTCGTGTGTGCGTGTGTGTGTGTGTCTGAGGTGGTaGTCAGGATTCAGTCTCCATTGTTCTCCATCTTAT +
Preference number: 4 (lower is better)
Translates to: FSCVRVCVCLRW*SGFSLHCSPSY
Trigger: ATAAGATGGAGAACAATGGAGACTGAATCCTGACAACCACCTCAGACACACACACACACGCACACACGAGAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR TCA 90 bp GTGGTTGTCAGGATTCAGTCTCCATTGTTCTCCATCTTATATTCGCTGAGGCAGAAACGATGGATCAGTTaGCACACTTTGCTCACAAGG +
Preference number: 4 (lower is better)
Translates to: VVVRIQSPLFSILYSLRQKRWIS*HTLLTR
Trigger: CCTTGTGAGCAAAGTGTGTCAACTGATCCATCGTTT...CTGCCTCAGCGAATATAAGATGGAGAACAATGGAGACTGAATCCTGACAACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR TCA 90 bp GTGGTTGTCAGGATTCAGTCTCCATTGTTCTCCATCTTATATTCGCTGAGGCAGTCTGGGAGATGCTTTTaGCATTTTGAGCCATTGCAG +
Preference number: 4 (lower is better)
Translates to: VVVRIQSPLFSILYSLRQSGRCF*HFEPLQ
Trigger: CTGCAATGGCTCAAAATGTCAAAAGCATCTCCCAGA...CTGCCTCAGCGAATATAAGATGGAGAACAATGGAGACTGAATCCTGACAACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR GCA 90 bp GCCCATCTGGCTTTTTGGCAGCTTCTGGTGATTCAAATTACAGTTCTCAGGCTTGACATTTTGAGCCATTaGAGTAAACCAGAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: AHLAFWQLLVIQITVLRLDILSH*SKPELP
Trigger: TGGCAGCTCTGGTTTACTGCAATGGCTCAAAATGTC...AAGCCTGAGAACTGTAATTTGAATCACCAGAAGCTGCCAAAAAGCCAGATGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR GCA 90 bp TGCAAGTATTTTCACCAAGATACAAACTGGCGAAAATTCAAAGAACCAGAGCCTTTCCAGAGAGGACCCTaGAGGGAATGTCTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: CKYFHQDTNWRKFKEPEPFQRGP*RECLPA
Trigger: GGCTGGAAGACATTCCCTGCAGGGTCCTCTCTGGAA...AGGCTCTGGTTCTTTGAATTTTCGCCAGTTTGTATCTTGGTGAAAATACTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR GCA 90 bp CATCTGGCTTTTTGGCAGCTTCTGGTGATTCAAATTACAGTTCTCAGGCTTGCATCACTAGATGGTTCTTaGTGTCATTCAGGCCGAGCA +
Preference number: 4 (lower is better)
Translates to: HLAFWQLLVIQITVLRLASLDGS*CHSGRA
Trigger: TGCTCGGCCTGAATGACAGCAAGAACCATCTAGTGA...TGCAAGCCTGAGAACTGTAATTTGAATCACCAGAAGCTGCCAAAAAGCCAGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR GCA 90 bp AGTATTTTCACCAAGATACAAACTGGCGAAAATTCAAAGAACCAGAGCCTGTCAGAGTATCTGTCAGGTTaGCCAGGGACCAGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SIFTKIQTGENSKNQSLSEYLSG*PGTRLL
Trigger: AAGCAGCCTGGTCCCTGGGCAACCTGACAGATACTC...TGACAGGCTCTGGTTCTTTGAATTTTCGCCAGTTTGTATCTTGGTGAAAATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CCA 90 bp CTACCATTGGAACATGAAGACTTTAGTCAGTGTGAGTGCGTGTTCACCAGTCACCTTGCCCAGCAAGTCTaGGAGATGCTTTTGACATTT +
Preference number: 4 (lower is better)
Translates to: LPLEHEDFSQCECVFTSHLAQQV*EMLLTF
Trigger: AAATGTCAAAAGCATCTCCCAGACTTGCTGGGCAAG...GTGACTGGTGAACACGCACTCACACTGACTAAAGTCTTCATGTTCCAATGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR GCA 90 bp TGCAAGTATTTTCACCAAGATACAAACTGGCGAAAATTCAAAGAACCAGAGCCTTCAAGAGGCCACTCTTaGCCAGCAAGTCTGGGAGAT +
Preference number: 4 (lower is better)
Translates to: CKYFHQDTNWRKFKEPEPSRGHS*PASLGD
Trigger: ATCTCCCAGACTTGCTGGGCAAGAGTGGCCTCTTGA...AGGCTCTGGTTCTTTGAATTTTCGCCAGTTTGTATCTTGGTGAAAATACTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR CAA 72 bp GTGCTATATTTGCTCATACAGTGCCCATCTGGCTTTTaGGCAGCTTCTGGTGATTCAAATTACAGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: VLYLLIQCPSGF*AASGDSNYSSQ
Trigger: CTGAGAACTGTAATTTGAATCACCAGAAGCTGCCAAAAAGCCAGATGGGCACTGTATGAGCAAATATAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
3UTR CAA 72 bp AGGAGCAGATCGGCAAATGAACCATCAGATCCGGTTTaGCAAGTATTTTCACCAAGATACAAACTGGCGAAA +
Preference number: 4 (lower is better)
Translates to: RSRSANEPSDPV*QVFSPRYKLAK
Trigger: TTTCGCCAGTTTGTATCTTGGTGAAAATACTTGCAAAACCGGATCTGATGGTTCATTTGCCGATCTGCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CCA 90 bp TGCAAGTATTTTCACCAAGATACAAACTGGCGAAAATTCAAAGAACCAGAGCCTCTCATCCTGGAAACTTaGGTCTGGTGTGTCCATGTT +
Preference number: 4 (lower is better)
Translates to: CKYFHQDTNWRKFKEPEPLILET*VWCVHV
Trigger: AACATGGACACACCAGACCCAAGTTTCCAGGATGAG...AGGCTCTGGTTCTTTGAATTTTCGCCAGTTTGTATCTTGGTGAAAATACTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CCA 90 bp AGTATTTTCACCAAGATACAAACTGGCGAAAATTCAAAGAACCAGAGCCTGTCACCTTGTCTTTGTCTGTaGAGGCTTGTATTGCACACT +
Preference number: 4 (lower is better)
Translates to: SIFTKIQTGENSKNQSLSPCLCL*RLVLHT
Trigger: AGTGTGCAATACAAGCCTCCACAGACAAAGACAAGG...TGACAGGCTCTGGTTCTTTGAATTTTCGCCAGTTTGTATCTTGGTGAAAATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR GCA 90 bp AGTATTTTCACCAAGATACAAACTGGCGAAAATTCAAAGAACCAGAGCCTGTCAGCTTGTATTGCACACTaGAACATTTTCAAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SIFTKIQTGENSKNQSLSACIAH*NIFKSR
Trigger: CCTGCTCTTGAAAATGTTGCAGTGTGCAATACAAGC...TGACAGGCTCTGGTTCTTTGAATTTTCGCCAGTTTGTATCTTGGTGAAAATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR TCA 90 bp TGCAAGTATTTTCACCAAGATACAAACTGGCGAAAATTCAAAGAACCAGAGCCTACTTCAGGGTCAGAGTaGGATAAATCACTCAATTTC +
Preference number: 4 (lower is better)
Translates to: CKYFHQDTNWRKFKEPEPTSGSE*DKSLNF
Trigger: GAAATTGAGTGATTTATCTCACTCTGACCCTGAAGT...AGGCTCTGGTTCTTTGAATTTTCGCCAGTTTGTATCTTGGTGAAAATACTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CCA 90 bp CCATGCGGGACACGGTGCTGTCATCCGGCTGCAGCGCGCGGAGCCTaGCAGACAAGCGGCGGAACCCATCGTCCTGCTCCGGCGACAGTT +
Preference number: 5 (lower is better)
Translates to: PCGTRCCHPAAARGA*QTSGGTHRPAPATV
Trigger: AACTGTCGCCGGAGCAGGACGATGGGTTCCGCCGCTTGTCTGCCAGGCTCCGCGCGCTGCAGCCGGATGACAGCACCGTGTCCCGCATGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CCA 90 bp CCCCACGGGGAGGAGCACCAGGCGCTCTCGCCACTCACATTCGCCTaGTCCATGCTGAGCCCTGGTGCTGCTTCCACTTCACCACAGGGC +
Preference number: 5 (lower is better)
Translates to: PHGEEHQALSPLTFA*SMLSPGAASTSPQG
Trigger: GCCCTGTGGTGAAGTGGAAGCAGCACCAGGGCTCAGCATGGACCAGGCGAATGTGAGTGGCGAGAGCGCCTGGTGCTCCTCCCCGTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS TCA 90 bp CATCCTCGGGGGCCACGCCGCCGCCCTCGCTGTAGTTCTCGGAGATaGGCTGGTCGAAGAGCAGGTGAATCTCCATGCGGGACACGGTGC +
Preference number: 5 (lower is better)
Translates to: HPRGPRRRPRCSSRR*AGRRAGESPCGTRC
Trigger: GCACCGTGTCCCGCATGGAGATTCACCTGCTCTTCGACCAGCTCATCTCCGAGAACTACAGCGAGGGCGGCGGCGTGGCCCCCGAGGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS GCA 90 bp GGAGGACAGGGCATCACAGGCGCTCGCCTGGAGAGTCGGGTGCTCTaGAGACTGCAGGGCTCGGGGCAAAGGACCACTCAGCATCGCAGT +
Preference number: 5 (lower is better)
Translates to: GGQGITGARLESRVL*RLQGSGQRTTQHRS
Trigger: ACTGCGATGCTGAGTGGTCCTTTGCCCCGAGCCCTGCAGTCTGCAGAGCACCCGACTCTCCAGGCGAGCGCCTGTGATGCCCTGTCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS GCA 90 bp GGCGCTCTCGCCACTCACATTCGCCTGGTCCATGCTGAGCCCTGGTaGTGCTTCCACTTCACCACAGGGCTCCTCCTCTTCCTCCTCCGC +
Preference number: 5 (lower is better)
Translates to: GALATHIRLVHAEPW*CFHFTTGLLLFLLR
Trigger: GCGGAGGAGGAAGAGGAGGAGCCCTGTGGTGAAGTGGAAGCAGCACCAGGGCTCAGCATGGACCAGGCGAATGTGAGTGGCGAGAGCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS GCA 90 bp AGGGCATCACAGGCGCTCGCCTGGAGAGTCGGGTGCTCTGCAGACTaGAGGGCTCGGGGCAAAGGACCACTCAGCATCGCAGTCCAGAAC +
Preference number: 5 (lower is better)
Translates to: RASQALAWRVGCSAD*RARGKGPLSIAVQN
Trigger: GTTCTGGACTGCGATGCTGAGTGGTCCTTTGCCCCGAGCCCTGCAGTCTGCAGAGCACCCGACTCTCCAGGCGAGCGCCTGTGATGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CCA 90 bp AAGGCCTCTGGCAAGATGGAGGACAGGGCATCACAGGCGCTCGCCTaGAGAGTCGGGTGCTCTGCAGACTGCAGGGCTCGGGGCAAAGGA +
Preference number: 5 (lower is better)
Translates to: KASGKMEDRASQALA*RVGCSADCRARGKG
Trigger: TCCTTTGCCCCGAGCCCTGCAGTCTGCAGAGCACCCGACTCTCCAGGCGAGCGCCTGTGATGCCCTGTCCTCCATCTTGCCAGAGGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS GCA 90 bp AAGATGGAGGACAGGGCATCACAGGCGCTCGCCTGGAGAGTCGGGTaGTCTGCAGACTGCAGGGCTCGGGGCAAAGGACCACTCAGCATC +
Preference number: 5 (lower is better)
Translates to: KMEDRASQALAWRVG*SADCRARGKGPLSI
Trigger: GATGCTGAGTGGTCCTTTGCCCCGAGCCCTGCAGTCTGCAGAGCACCCGACTCTCCAGGCGAGCGCCTGTGATGCCCTGTCCTCCATCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CCA 90 bp CCAGGCGCTCTCGCCACTCACATTCGCCTGGTCCATGCTGAGCCCTaGTGCTGCTTCCACTTCACCACAGGGCTCCTCCTCTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: PGALATHIRLVHAEP*CCFHFTTGLLLFLL
Trigger: GAGGAGGAAGAGGAGGAGCCCTGTGGTGAAGTGGAAGCAGCACCAGGGCTCAGCATGGACCAGGCGAATGTGAGTGGCGAGAGCGCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS GCA 90 bp GCTCTCGCCACTCACATTCGCCTGGTCCATGCTGAGCCCTGGTGCTaGTTCCACTTCACCACAGGGCTCCTCCTCTTCCTCCTCCGCTTT +
Preference number: 5 (lower is better)
Translates to: ALATHIRLVHAEPWC*FHFTTGLLLFLLRF
Trigger: AAAGCGGAGGAGGAAGAGGAGGAGCCCTGTGGTGAAGTGGAAGCAGCACCAGGGCTCAGCATGGACCAGGCGAATGTGAGTGGCGAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS GCA 90 bp CCAAAACCTGTAGAGCCTCCAGCCGCATGGGGGATGGTTCATAGGTaGTTCCCAGGGCGGAGCCAGCATCGCTACCTGAGCAGGAGTCCT +
Preference number: 5 (lower is better)
Translates to: PKPVEPPAAWGMVHR*FPGRSQHRYLSRSP
Trigger: AGGACTCCTGCTCAGGTAGCGATGCTGGCTCCGCCCTGGGAAGCACCTATGAACCATCCCCCATGCGGCTGGAGGCTCTACAGGTTTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS TCA 90 bp GGATGGTTCATAGGTGCTTCCCAGGGCGGAGCCAGCATCGCTACCTaGGCAGGAGTCCTCCTTGGGCAGCACCACAGTGGAAATGCAGAG +
Preference number: 5 (lower is better)
Translates to: GWFIGASQGGASIAT*AGVLLGQHHSGNAE
Trigger: CTCTGCATTTCCACTGTGGTGCTGCCCAAGGAGGACTCCTGCTCAGGTAGCGATGCTGGCTCCGCCCTGGGAAGCACCTATGAACCATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS TCA 90 bp GAAGCAGCGCCTGGCAGATGTGAGTCCGCAGGCTGGCACAGTACTTaGACTCCAGGAAGTCTGTGGTGTCTTCGCTCTTCTGCAGGGCAG +
Preference number: 5 (lower is better)
Translates to: EAAPGRCESAGWHST*TPGSLWCLRSSAGQ
Trigger: CTGCCCTGCAGAAGAGCGAAGACACCACAGACTTCCTGGAGTTCAAGTACTGTGCCAGCCTGCGGACTCACATCTGCCAGGCGCTGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS TCA 90 bp CTTGAAGAGCACAGGCACGGGTCTTTGGAGACGGGTCCTTTAATGTaGGCGTCATTAAGGACACTGACTGTGGGCTTCCGAGCTCCGGCG +
Preference number: 5 (lower is better)
Translates to: LEEHRHGSLETGPLM*ASLRTLTVGFRAPA
Trigger: CGCCGGAGCTCGGAAGCCCACAGTCAGTGTCCTTAATGACGCTCACATTAAAGGACCCGTCTCCAAAGACCCGTGCCTGTGCTCTTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CCA 90 bp TGCACCCAGTTCTTCCAGGAGCTTCACGCCGTGGAGCTGAATGGATaGGTTTGCCTCACACATGCACTTACAGATCACCTCGCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: CTQFFQELHAVELNG*VCLTHALTDHLAQL
Trigger: GAGCTGGGCGAGGTGATCTGTAAGTGCATGTGTGAGGCAAACCCATCCATTCAGCTCCACGGCGTGAAGCTCCTGGAAGAACTGGGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CCA 90 bp GGCAAAGGACCACTCAGCATCGCAGTCCAGAACACCACCACCAGGTaGACTGGCACTCTCTGTTCAGGCGCTATGTTGGAATCTGGCTTG +
Preference number: 5 (lower is better)
Translates to: GKGPLSIAVQNTTTR*TGTLCSGAMLESGL
Trigger: CAAGCCAGATTCCAACATAGCGCCTGAACAGAGAGTGCCAGTCCACCTGGTGGTGGTGTTCTGGACTGCGATGCTGAGTGGTCCTTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CCA 90 bp AATGCACAAAATCTGCTTGTCGTTCGGCAGACTGCTGAAGGCCTCTaGCAAGATGGAGGACAGGGCATCACAGGCGCTCGCCTGGAGAGT +
Preference number: 5 (lower is better)
Translates to: NAQNLLVVRQTAEGL*QDGGQGITGARLES
Trigger: ACTCTCCAGGCGAGCGCCTGTGATGCCCTGTCCTCCATCTTGCCAGAGGCCTTCAGCAGTCTGCCGAACGACAAGCAGATTTTGTGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CCA 90 bp GTGTCTTCGCTCTTCTGCAGGGCAGTGACCAGCGCACTCCAGATCTaGATGAACTGTTCTAGGGACCCGTACTGTCCTCTCTTGCTCGGA +
Preference number: 5 (lower is better)
Translates to: VSSLFCRAVTSALQI*MNCSRDPYCPLLLG
Trigger: TCCGAGCAAGAGAGGACAGTACGGGTCCCTAGAACAGTTCATCCAGATCTGGAGTGCGCTGGTCACTGCCCTGCAGAAGAGCGAAGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS TCA 90 bp TCTGAGGGCCCACGAAGCATCACCTGTTCTCCTGAGGAGTCACAGTaGACGGTCAGGATGTCCTCTAAGAATCCCATGATGGCCCCTCTG +
Preference number: 5 (lower is better)
Translates to: SEGPRSITCSPEESQ*TVRMSSKNPMMAPL
Trigger: CAGAGGGGCCATCATGGGATTCTTAGAGGACATCCTGACCGTTCACTGTGACTCCTCAGGAGAACAGGTGATGCTTCGTGGGCCCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CCA 90 bp GCACTGCGGGCATCTCTATGTTTAATCCAGGGAGTCCGTGAAACATaGCTTTCTTCAGCACAGCGAGAAGCGCTCCCAGGTGCTCGGTCT +
Preference number: 5 (lower is better)
Translates to: ALRASLCLIQGVRET*LSSAQREALPGARS
Trigger: AGACCGAGCACCTGGGAGCGCTTCTCGCTGTGCTGAAGAAAGCCATGTTTCACGGACTCCCTGGATTAAACATAGAGATGCCCGCAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CCA 90 bp AGGACCACTCAGCATCGCAGTCCAGAACACCACCACCAGGTGGACTaGCACTCTCTGTTCAGGCGCTATGTTGGAATCTGGCTTGTACTG +
Preference number: 5 (lower is better)
Translates to: RTTQHRSPEHHHQVD*HSLFRRYVGIWLVL
Trigger: CAGTACAAGCCAGATTCCAACATAGCGCCTGAACAGAGAGTGCCAGTCCACCTGGTGGTGGTGTTCTGGACTGCGATGCTGAGTGGTCCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CAA 90 bp CTTACAAACTCCTGGCCCTCGTGCCTTGACTCCTCAGAGCAGGGATTTCAGGTGAGGGCCCGGACCGCATaGCTTTTGACCTTGTCTTTG +
Preference number: 5 (lower is better)
Translates to: LTNSWPSCLDSSEQGFQVRARTA*LLTLSL
Trigger: CAAAGACAAGGTCAAAAGCAATGCGGTCCGGGCCCT...CACCTGAAATCCCTGCTCTGAGGAGTCAAGGCACGAGGGCCAGGAGTTTGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS TCA 90 bp GGGTATAGCACTGCGGGCATCTCTATGTTTAATCCAGGGAGTCCGTaGAACATGGCTTTCTTCAGCACAGCGAGAAGCGCTCCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: GYSTAGISMFNPGSP*NMAFFSTARSAPRC
Trigger: GCACCTGGGAGCGCTTCTCGCTGTGCTGAAGAAAGCCATGTTTCACGGACTCCCTGGATTAAACATAGAGATGCCCGCAGTGCTATACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS TCA 90 bp ATCAAGCCTGCACCCAGTTCTTCCAGGAGCTTCACGCCGTGGAGCTaGATGGATGGGTTTGCCTCACACATGCACTTACAGATCACCTCG +
Preference number: 5 (lower is better)
Translates to: IKPAPSSSRSFTPWS*MDGFASHMHLQITS
Trigger: CGAGGTGATCTGTAAGTGCATGTGTGAGGCAAACCCATCCATTCAGCTCCACGGCGTGAAGCTCCTGGAAGAACTGGGTGCAGGCTTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS GCA 90 bp GGAGCTTCACGCCGTGGAGCTGAATGGATGGGTTTGCCTCACACATaGACTTACAGATCACCTCGCCCAGCTCCATCAAGTACAACTGAG +
Preference number: 5 (lower is better)
Translates to: GASRRGAEWMGLPHT*TYRSPRPAPSSTTE
Trigger: CTCAGTTGTACTTGATGGAGCTGGGCGAGGTGATCTGTAAGTGCATGTGTGAGGCAAACCCATCCATTCAGCTCCACGGCGTGAAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS GCA 90 bp CAGTTCTTCCAGGAGCTTCACGCCGTGGAGCTGAATGGATGGGTTTaGCTCACACATGCACTTACAGATCACCTCGCCCAGCTCCATCAA +
Preference number: 5 (lower is better)
Translates to: QFFQELHAVELNGWV*LTHALTDHLAQLHQ
Trigger: TTGATGGAGCTGGGCGAGGTGATCTGTAAGTGCATGTGTGAGGCAAACCCATCCATTCAGCTCCACGGCGTGAAGCTCCTGGAAGAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS GCA 90 bp ACTGGCACTCTCTGTTCAGGCGCTATGTTGGAATCTGGCTTGTACTaGTGTATCAAGCCTGCACCCAGTTCTTCCAGGAGCTTCACGCCG +
Preference number: 5 (lower is better)
Translates to: TGTLCSGAMLESGLY*CIKPAPSSSRSFTP
Trigger: CGGCGTGAAGCTCCTGGAAGAACTGGGTGCAGGCTTGATACAGCAGTACAAGCCAGATTCCAACATAGCGCCTGAACAGAGAGTGCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CCA 90 bp CACCAGGTGGACTGGCACTCTCTGTTCAGGCGCTATGTTGGAATCTaGCTTGTACTGCTGTATCAAGCCTGCACCCAGTTCTTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: HQVDWHSLFRRYVGI*LVLLYQACTQFFQE
Trigger: CTCCTGGAAGAACTGGGTGCAGGCTTGATACAGCAGTACAAGCCAGATTCCAACATAGCGCCTGAACAGAGAGTGCCAGTCCACCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS GCA 90 bp TTCAGGCGCTATGTTGGAATCTGGCTTGTACTGCTGTATCAAGCCTaGACCCAGTTCTTCCAGGAGCTTCACGCCGTGGAGCTGAATGGA +
Preference number: 5 (lower is better)
Translates to: FRRYVGIWLVLLYQA*TQFFQELHAVELNG
Trigger: TCCATTCAGCTCCACGGCGTGAAGCTCCTGGAAGAACTGGGTGCAGGCTTGATACAGCAGTACAAGCCAGATTCCAACATAGCGCCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS GCA 90 bp GCACAGTACTTGAACTCCAGGAAGTCTGTGGTGTCTTCGCTCTTCTaGAGGGCAGTGACCAGCGCACTCCAGATCTGGATGAACTGTTCT +
Preference number: 5 (lower is better)
Translates to: AQYLNSRKSVVSSLF*RAVTSALQIWMNCS
Trigger: AGAACAGTTCATCCAGATCTGGAGTGCGCTGGTCACTGCCCTGCAGAAGAGCGAAGACACCACAGACTTCCTGGAGTTCAAGTACTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CCA 90 bp ACACCACCACCAGGTGGACTGGCACTCTCTGTTCAGGCGCTATGTTaGAATCTGGCTTGTACTGCTGTATCAAGCCTGCACCCAGTTCTT +
Preference number: 5 (lower is better)
Translates to: TPPPGGLALSVQALC*NLACTAVSSLHPVL
Trigger: AAGAACTGGGTGCAGGCTTGATACAGCAGTACAAGCCAGATTCCAACATAGCGCCTGAACAGAGAGTGCCAGTCCACCTGGTGGTGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CAA 90 bp TGGAACTACACAGCAAAGGAGAGACTTACAAACTCCTGGCCCTCGTGCCTTGACCACAGGCACGGGTCTTaGGAGACGGGTCCTTTAATG +
Preference number: 5 (lower is better)
Translates to: WNYTAKERLTNSWPSCLDHRHGS*ETGPLM
Trigger: CATTAAAGGACCCGTCTCCAAAGACCCGTGCCTGTG...GTCAAGGCACGAGGGCCAGGAGTTTGTAAGTCTCTCCTTTGCTGTGTAGTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CAA 90 bp GTCAGGATTCAGTCTCCATTGTTCTCCATCTTATATTCGCTGAGGCAGGGTCTCAGGGACCAGGCTGCTTaGGCGCGCACGTTTAGTGAC +
Preference number: 5 (lower is better)
Translates to: VRIQSPLFSILYSLRQGLRDQAA*ARTFSD
Trigger: GTCACTAAACGTGCGCGCCAAAGCAGCCTGGTCCCT...GAGACCCTGCCTCAGCGAATATAAGATGGAGAACAATGGAGACTGAATCCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CAA 90 bp AATCACCCTGAAGGAATGCAAGCTCACACAATGTTCTGTGTGGACCCCTCACTGAGAGGAGCAGGGCTGTaGAAGAAGCAGCTGGACTTC +
Preference number: 5 (lower is better)
Translates to: NHPEGMQAHTMFCVDPSLRGAGL*KKQLDF
Trigger: GAAGTCCAGCTGCTTCTTCAACAGCCCTGCTCCTCT...CAGTGAGGGGTCCACACAGAACATTGTGTGAGCTTGCATTCCTTCAGGGTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS TCA 90 bp GTGGATTCTGGCTGCTGGGGTTTAACAGGAGATCGCCCATCATACTaGGGAAGTGGAGTTGGGTATAGCACTGCGGGCATCTCTATGTTT +
Preference number: 5 (lower is better)
Translates to: VDSGCWGLTGDRPSY*GSGVGYSTAGISMF
Trigger: AAACATAGAGATGCCCGCAGTGCTATACCCAACTCCACTTCCTCAGTATGATGGGCGATCTCCTGTTAAACCCCAGCAGCCAGAATCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS TCA 90 bp CCGTTTGTGGTCACTAGTGTCTTCAGCAACAGAAAGGAACTGCTTTaGGCCTTCCAAGATGGCAGACAGGACTTGAAGAGCACAGGCACG +
Preference number: 5 (lower is better)
Translates to: PFVVTSVFSNRKELL*AFQDGRQDLKSTGT
Trigger: CGTGCCTGTGCTCTTCAAGTCCTGTCTGCCATCTTGGAAGGCTCAAAGCAGTTCCTTTCTGTTGCTGAAGACACTAGTGACCACAAACGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS TCA 90 bp CCTCGTTTACAACAGTGGAGATCAGAGCCTGTATGGACTCCTCAATaGTTTCAGCGAACCTGGGCCTTTCTACGTGAGAGGGCTGGAGAA +
Preference number: 5 (lower is better)
Translates to: PRLQQWRSEPVWTPQ*FQRTWAFLRERAGE
Trigger: TTCTCCAGCCCTCTCACGTAGAAAGGCCCAGGTTCGCTGAAATCATTGAGGAGTCCATACAGGCTCTGATCTCCACTGTTGTAAACGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CAA 90 bp GTGGTTGTCAGGATTCAGTCTCCATTGTTCTCCATCTTATATTCGCTGAGGCAGGATGGCAGACAGGACTaGAAGAGCACAGGCACGGGT +
Preference number: 5 (lower is better)
Translates to: VVVRIQSPLFSILYSLRQDGRQD*KSTGTG
Trigger: ACCCGTGCCTGTGCTCTTCAAGTCCTGTCTGCCATC...CTGCCTCAGCGAATATAAGATGGAGAACAATGGAGACTGAATCCTGACAACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CAA 90 bp CATCTGGCTTTTTGGCAGCTTCTGGTGATTCAAATTACAGTTCTCAGGCTTGCAGAGCAGGAGTCCTCCTaGGGCAGCACCACAGTGGAA +
Preference number: 5 (lower is better)
Translates to: HLAFWQLLVIQITVLRLAEQESS*GSTTVE
Trigger: TTCCACTGTGGTGCTGCCCAAGGAGGACTCCTGCTC...TGCAAGCCTGAGAACTGTAATTTGAATCACCAGAAGCTGCCAAAAAGCCAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CAA 90 bp GTGTGTGTGTCTGAGGTGGTTGTCAGGATTCAGTCTCCATTGTTCTCCATCTTAAGAGTATCTGTCAGGTaGCCCAGGGACCAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: VCVSEVVVRIQSPLFSILRVSVR*PRDQAA
Trigger: AGCAGCCTGGTCCCTGGGCAACCTGACAGATACTCT...TAAGATGGAGAACAATGGAGACTGAATCCTGACAACCACCTCAGACACACACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS GCA 90 bp GTCTGGGACGAGGACTCTGCCACCAAAGCTAACAAAAGACATCTGTaGAACTCTCTAATGCTGGATGCAATTGTGACTGAGAAGGGCGTG +
Preference number: 5 (lower is better)
Translates to: VWDEDSATKANKRHL*NSLMLDAIVTEKGV
Trigger: CACGCCCTTCTCAGTCACAATTGCATCCAGCATTAGAGAGTTGCACAGATGTCTTTTGTTAGCTTTGGTGGCAGAGTCCTCGTCCCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CAA 90 bp AATCACCCTGAAGGAATGCAAGCTCACACAATGTTCTGTGTGGACCCCTCACTGCAGAGCTGCCAGGGCTaGAAGAATTTCCATGTGTGT +
Preference number: 5 (lower is better)
Translates to: NHPEGMQAHTMFCVDPSLQSCQG*KNFHVC
Trigger: ACACACATGGAAATTCTTCAAGCCCTGGCAGCTCTG...CAGTGAGGGGTCCACACAGAACATTGTGTGAGCTTGCATTCCTTCAGGGTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CAA 90 bp TTACAAACTCCTGGCCCTCGTGCCTTGACTCCTCAGAGCAGGGATTTCAGGTGTATGTTGGAATCTGGCTaGTACTGCTGTATCAAGCCT +
Preference number: 5 (lower is better)
Translates to: LQTPGPRALTPQSRDFRCMLESG*YCCIKP
Trigger: AGGCTTGATACAGCAGTACAAGCCAGATTCCAACAT...ACACCTGAAATCCCTGCTCTGAGGAGTCAAGGCACGAGGGCCAGGAGTTTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CAA 90 bp AAGCTCACACAATGTTCTGTGTGGACCCCTCACTGTGTAGGCGGACCCCTTTGGCTTTTGACCTTGTCTTaGTCTGTGGAGGCTTGTATT +
Preference number: 5 (lower is better)
Translates to: KLTQCSVWTPHCVGGPLWLLTLS*SVEACI
Trigger: AATACAAGCCTCCACAGACAAAGACAAGGTCAAAAG...CCAAAGGGGTCCGCCTACACAGTGAGGGGTCCACACAGAACATTGTGTGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CCA 90 bp ATGCTGGATGCAATTGTGACTGAGAAGGGCGTGAAAGCCCGTTTGTaGTCACTAGTGTCTTCAGCAACAGAAAGGAACTGCTTTGAGCCT +
Preference number: 5 (lower is better)
Translates to: MLDAIVTEKGVKARL*SLVSSATERNCFEP
Trigger: AGGCTCAAAGCAGTTCCTTTCTGTTGCTGAAGACACTAGTGACCACAAACGGGCTTTCACGCCCTTCTCAGTCACAATTGCATCCAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CAA 90 bp GTCAGGATTCAGTCTCCATTGTTCTCCATCTTATATTCGCTGAGGCAGGGTCTCCAGAAAGGAACTGCTTaGAGCCTTCCAAGATGGCAG +
Preference number: 5 (lower is better)
Translates to: VRIQSPLFSILYSLRQGLQKGTA*SLPRWQ
Trigger: CTGCCATCTTGGAAGGCTCAAAGCAGTTCCTTTCTG...GAGACCCTGCCTCAGCGAATATAAGATGGAGAACAATGGAGACTGAATCCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CAA 90 bp TGGAACTACACAGCAAAGGAGAGACTTACAAACTCCTGGCCCTCGTGCCTTGACCTGTGGAGGCTTGTATaGCACACTGCAACATTTTCA +
Preference number: 5 (lower is better)
Translates to: WNYTAKERLTNSWPSCLDLWRLV*HTATFS
Trigger: TGAAAATGTTGCAGTGTGCAATACAAGCCTCCACAG...GTCAAGGCACGAGGGCCAGGAGTTTGTAAGTCTCTCCTTTGCTGTGTAGTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS TCA 90 bp CAAAAGACATCTGTGCAACTCTCTAATGCTGGATGCAATTGTGACTaGGAAGGGCGTGAAAGCCCGTTTGTGGTCACTAGTGTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: QKTSVQLSNAGCNCD*EGRESPFVVTSVFS
Trigger: GCTGAAGACACTAGTGACCACAAACGGGCTTTCACGCCCTTCTCAGTCACAATTGCATCCAGCATTAGAGAGTTGCACAGATGTCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS TCA 90 bp GGCGGATGTAAGGCTTTATGTGGTTCCAGACTTTGGTTAGCAAGCTaGGTTTCAGACGGTTGTAGGGGGCGTTTGATACTAGGTTTGCAA +
Preference number: 5 (lower is better)
Translates to: GGCKALCGSRLWLAS*VSDGCRGRLILGLQ
Trigger: TTGCAAACCTAGTATCAAACGCCCCCTACAACCGTCTGAAACTCAGCTTGCTAACCAAAGTCTGGAACCACATAAAGCCTTACATCCGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS TCA 90 bp CCCAGGGACCAGGCTGCTTTGGCGCGCACGTTTAGTGACTTATCTTaGAGTGACATCAATATAGCATTTGCTGTGTCTGCAACAAATATG +
Preference number: 5 (lower is better)
Translates to: PRDQAALARTFSDLS*SDINIAFAVSATNM
Trigger: CATATTTGTTGCAGACACAGCAAATGCTATATTGATGTCACTTCAAGATAAGTCACTAAACGTGCGCGCCAAAGCAGCCTGGTCCCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS GCA 90 bp GACCGCATTGCTTTTGACCTTGTCTTTGTCTGTGGAGGCTTGTATTaGACACTGCAACATTTTCAAGAGCAGGAGTCCAGAGAACTCATC +
Preference number: 5 (lower is better)
Translates to: DRIAFDLVFVCGGLY*TLQHFQEQESRELI
Trigger: GATGAGTTCTCTGGACTCCTGCTCTTGAAAATGTTGCAGTGTGCAATACAAGCCTCCACAGACAAAGACAAGGTCAAAAGCAATGCGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CAA 90 bp TGGAACTACACAGCAAAGGAGAGACTTACAAACTCCTGGCCCTCGTGCCTTGACGATGCTTTTGACATTTaGAGCCATTGCAGTAAACCA +
Preference number: 5 (lower is better)
Translates to: WNYTAKERLTNSWPSCLDDAFDI*SHCSKP
Trigger: TGGTTTACTGCAATGGCTCAAAATGTCAAAAGCATC...GTCAAGGCACGAGGGCCAGGAGTTTGTAAGTCTCTCCTTTGCTGTGTAGTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CAA 90 bp CATCTGGCTTTTTGGCAGCTTCTGGTGATTCAAATTACAGTTCTCAGGCTTGCAGCTGAATGGATGGGTTaGCCTCACACATGCACTTAC +
Preference number: 5 (lower is better)
Translates to: HLAFWQLLVIQITVLRLAAEWMG*PHTCTY
Trigger: GTAAGTGCATGTGTGAGGCAAACCCATCCATTCAGC...TGCAAGCCTGAGAACTGTAATTTGAATCACCAGAAGCTGCCAAAAAGCCAGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CAA 90 bp CTACCATTGGAACATGAAGACTTTAGTCAGTGTGAGTGCGTGTTCACCAGTCACGCATTGCTTTTGACCTaGTCTTTGTCTGTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: LPLEHEDFSQCECVFTSHALLLT*SLSVEA
Trigger: AGCCTCCACAGACAAAGACAAGGTCAAAAGCAATGC...GTGACTGGTGAACACGCACTCACACTGACTAAAGTCTTCATGTTCCAATGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CAA 90 bp CATCTGGCTTTTTGGCAGCTTCTGGTGATTCAAATTACAGTTCTCAGGCTTGCACGGACCGCATTGCTTTaGACCTTGTCTTTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: HLAFWQLLVIQITVLRLARTALL*TLSLSV
Trigger: CACAGACAAAGACAAGGTCAAAAGCAATGCGGTCCG...TGCAAGCCTGAGAACTGTAATTTGAATCACCAGAAGCTGCCAAAAAGCCAGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS GCA 90 bp GGTCAGAGTGAGATAAATCACTCAATTTCATCAAGAGGCCACTCTTaGCCAGCAAGTCTGGGAGATGCTTTTGACATTTTGAGCCATTGC +
Preference number: 5 (lower is better)
Translates to: GQSEINHSISSRGHS*PASLGDAFDILSHC
Trigger: GCAATGGCTCAAAATGTCAAAAGCATCTCCCAGACTTGCTGGGCAAGAGTGGCCTCTTGATGAAATTGAGTGATTTATCTCACTCTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CAA 90 bp AGTATTTTCACCAAGATACAAACTGGCGAAAATTCAAAGAACCAGAGCCTGTCAATCAAGAGGCCACTCTaGCCCAGCAAGTCTGGGAGA +
Preference number: 5 (lower is better)
Translates to: SIFTKIQTGENSKNQSLSIKRPL*PSKSGR
Trigger: TCTCCCAGACTTGCTGGGCAAGAGTGGCCTCTTGAT...TGACAGGCTCTGGTTCTTTGAATTTTCGCCAGTTTGTATCTTGGTGAAAATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CAA 90 bp GTGGTTGTCAGGATTCAGTCTCCATTGTTCTCCATCTTATATTCGCTGAGGCAGAATGGTCAAGAAAGCTaGGAAGCAGACATGCTGGTA +
Preference number: 5 (lower is better)
Translates to: VVVRIQSPLFSILYSLRQNGQES*EADMLV
Trigger: TACCAGCATGTCTGCTTCCAAGCTTTCTTGACCATT...CTGCCTCAGCGAATATAAGATGGAGAACAATGGAGACTGAATCCTGACAACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CAA 90 bp GTGTGTGTGTCTGAGGTGGTTGTCAGGATTCAGTCTCCATTGTTCTCCATCTTAATGTGGTTCCAGACTTaGGTTAGCAAGCTGAGTTTC +
Preference number: 5 (lower is better)
Translates to: VCVSEVVVRIQSPLFSILMWFQT*VSKLSF
Trigger: GAAACTCAGCTTGCTAACCAAAGTCTGGAACCACAT...TAAGATGGAGAACAATGGAGACTGAATCCTGACAACCACCTCAGACACACACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CAA 90 bp GCCCATCTGGCTTTTTGGCAGCTTCTGGTGATTCAAATTACAGTTCTCAGGCTTTCTGGTGTGTCCATGTaGACAATCAGAGTATCTGTC +
Preference number: 5 (lower is better)
Translates to: AHLAFWQLLVIQITVLRLSGVSM*TIRVSV
Trigger: GACAGATACTCTGATTGTCAACATGGACACACCAGA...AAGCCTGAGAACTGTAATTTGAATCACCAGAAGCTGCCAAAAAGCCAGATGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS GCA 90 bp TTGCTTTTGACCTTGTCTTTGTCTGTGGAGGCTTGTATTGCACACTaGAACATTTTCAAGAGCAGGAGTCCAGAGAACTCATCCTGGAAA +
Preference number: 5 (lower is better)
Translates to: LLLTLSLSVEACIAH*NIFKSRSPENSSWK
Trigger: TTTCCAGGATGAGTTCTCTGGACTCCTGCTCTTGAAAATGTTGCAGTGTGCAATACAAGCCTCCACAGACAAAGACAAGGTCAAAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CAA 90 bp TGCAAGTATTTTCACCAAGATACAAACTGGCGAAAATTCAAAGAACCAGAGCCTTTCACTAGATGGTTCTaGCTGTCATTCAGGCCGAGC +
Preference number: 5 (lower is better)
Translates to: CKYFHQDTNWRKFKEPEPFTRWF*LSFRPS
Trigger: GCTCGGCCTGAATGACAGCAAGAACCATCTAGTGAA...AGGCTCTGGTTCTTTGAATTTTCGCCAGTTTGTATCTTGGTGAAAATACTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS-3UTR CAA 90 bp CATCTGGCTTTTTGGCAGCTTCTGGTGATTCAAATTACAGTTCTCAGGCTTGCACCATATCAGACGATTTaGGAGACTGTAAAATGGTCA +
Preference number: 5 (lower is better)
Translates to: HLAFWQLLVIQITVLRLAPYQTI*ETVKWS
Trigger: TGACCATTTTACAGTCTCCAAAATCGTCTGATATGG...TGCAAGCCTGAGAACTGTAATTTGAATCACCAGAAGCTGCCAAAAAGCCAGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CCA 72 bp ACACGGTGCTGTCATCCGGCTGCAGCGCGCGGAGCCTaGCAGACAAGCGGCGGAACCCATCGTCCTGCTCCG +
Preference number: 6 (lower is better)
Translates to: TRCCHPAAARGA*QTSGGTHRPAP
Trigger: CGGAGCAGGACGATGGGTTCCGCCGCTTGTCTGCCAGGCTCCGCGCGCTGCAGCCGGATGACAGCACCGTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS GCA 72 bp GGTCGAAGAGCAGGTGAATCTCCATGCGGGACACGGTaGTGTCATCCGGCTGCAGCGCGCGGAGCCTGGCAG +
Preference number: 6 (lower is better)
Translates to: GRRAGESPCGTR*CHPAAARGAWQ
Trigger: CTGCCAGGCTCCGCGCGCTGCAGCCGGATGACAGCACCGTGTCCCGCATGGAGATTCACCTGCTCTTCGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS GCA 72 bp CAGGCGCTCGCCTGGAGAGTCGGGTGCTCTGCAGACTaGAGGGCTCGGGGCAAAGGACCACTCAGCATCGCA +
Preference number: 6 (lower is better)
Translates to: QALAWRVGCSAD*RARGKGPLSIA
Trigger: TGCGATGCTGAGTGGTCCTTTGCCCCGAGCCCTGCAGTCTGCAGAGCACCCGACTCTCCAGGCGAGCGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS GCA 72 bp GACAGGGCATCACAGGCGCTCGCCTGGAGAGTCGGGTaGTCTGCAGACTGCAGGGCTCGGGGCAAAGGACCA +
Preference number: 6 (lower is better)
Translates to: DRASQALAWRVG*SADCRARGKGP
Trigger: TGGTCCTTTGCCCCGAGCCCTGCAGTCTGCAGAGCACCCGACTCTCCAGGCGAGCGCCTGTGATGCCCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS TCA 72 bp GGGCCACGCCGCCGCCCTCGCTGTAGTTCTCGGAGATaGGCTGGTCGAAGAGCAGGTGAATCTCCATGCGGG +
Preference number: 6 (lower is better)
Translates to: GPRRRPRCSSRR*AGRRAGESPCG
Trigger: CCCGCATGGAGATTCACCTGCTCTTCGACCAGCTCATCTCCGAGAACTACAGCGAGGGCGGCGGCGTGGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS GCA 72 bp GTAGAGCCTCCAGCCGCATGGGGGATGGTTCATAGGTaGTTCCCAGGGCGGAGCCAGCATCGCTACCTGAGC +
Preference number: 6 (lower is better)
Translates to: VEPPAAWGMVHR*FPGRSQHRYLS
Trigger: GCTCAGGTAGCGATGCTGGCTCCGCCCTGGGAAGCACCTATGAACCATCCCCCATGCGGCTGGAGGCTCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CAA 90 bp CTTCCCAGGGCGGAGCCAGCATCGCTACCTGAGCAGGAGTCCTCCTaGGGCAGCACCACAGTGGAAATGCAGAGTCGGATGAGCCAGCAG +
Preference number: 6 (lower is better)
Translates to: LPRAEPASLPEQESS*GSTTVEMQSRMSQQ
Trigger: CTGCTGGCTCATCCGACTCTGCATTTCCACTGTGGTGCTGCCCAAGGAGGACTCCTGCTCAGGTAGCGATGCTGGCTCCGCCCTGGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS TCA 72 bp AGGCGCTCTCGCCACTCACATTCGCCTGGTCCATGCTaGGCCCTGGTGCTGCTTCCACTTCACCACAGGGCT +
Preference number: 6 (lower is better)
Translates to: RRSRHSHSPGPC*ALVLLPLHHRA
Trigger: AGCCCTGTGGTGAAGTGGAAGCAGCACCAGGGCTCAGCATGGACCAGGCGAATGTGAGTGGCGAGAGCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS TCA 72 bp ATAGGTGCTTCCCAGGGCGGAGCCAGCATCGCTACCTaGGCAGGAGTCCTCCTTGGGCAGCACCACAGTGGA +
Preference number: 6 (lower is better)
Translates to: IGASQGGASIAT*AGVLLGQHHSG
Trigger: TCCACTGTGGTGCTGCCCAAGGAGGACTCCTGCTCAGGTAGCGATGCTGGCTCCGCCCTGGGAAGCACCTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CCA 72 bp CTCGCCACTCACATTCGCCTGGTCCATGCTGAGCCCTaGTGCTGCTTCCACTTCACCACAGGGCTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: LATHIRLVHAEP*CCFHFTTGLLL
Trigger: GAGGAGGAGCCCTGTGGTGAAGTGGAAGCAGCACCAGGGCTCAGCATGGACCAGGCGAATGTGAGTGGCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CCA 72 bp GAGGAGCACCAGGCGCTCTCGCCACTCACATTCGCCTaGTCCATGCTGAGCCCTGGTGCTGCTTCCACTTCA +
Preference number: 6 (lower is better)
Translates to: EEHQALSPLTFA*SMLSPGAASTS
Trigger: TGAAGTGGAAGCAGCACCAGGGCTCAGCATGGACCAGGCGAATGTGAGTGGCGAGAGCGCCTGGTGCTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CCA 72 bp CCAGGTGAGCCAAAACCTGTAGAGCCTCCAGCCGCATaGGGGATGGTTCATAGGTGCTTCCCAGGGCGGAGC +
Preference number: 6 (lower is better)
Translates to: PGEPKPVEPPAA*GMVHRCFPGRS
Trigger: GCTCCGCCCTGGGAAGCACCTATGAACCATCCCCCATGCGGCTGGAGGCTCTACAGGTTTTGGCTCACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS TCA 72 bp CCTTGGGCAGCACCACAGTGGAAATGCAGAGTCGGATaGGCCAGCAGGGCTCCGATGACCCCTTTGGTGAGC +
Preference number: 6 (lower is better)
Translates to: PWAAPQWKCRVG*ASRAPMTPLVS
Trigger: GCTCACCAAAGGGGTCATCGGAGCCCTGCTGGCTCATCCGACTCTGCATTTCCACTGTGGTGCTGCCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS GCA 72 bp GCCACTCACATTCGCCTGGTCCATGCTGAGCCCTGGTaGTGCTTCCACTTCACCACAGGGCTCCTCCTCTTC +
Preference number: 6 (lower is better)
Translates to: ATHIRLVHAEPW*CFHFTTGLLLF
Trigger: GAAGAGGAGGAGCCCTGTGGTGAAGTGGAAGCAGCACCAGGGCTCAGCATGGACCAGGCGAATGTGAGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CCA 72 bp GCCACTCGGACCATCTGGACTCTTTCCTGTGGGGTGTaGACTGCTCCGGGGTCATCTCCCTCTGCTCCTGAT +
Preference number: 6 (lower is better)
Translates to: ATRTIWTLSCGV*TAPGSSPSAPD
Trigger: ATCAGGAGCAGAGGGAGATGACCCCGGAGCAGTCCACACCCCACAGGAAAGAGTCCAGATGGTCCGAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS GCA 72 bp TTCAGCACAGCGAGAAGCGCTCCCAGGTGCTCGGTCTaGGTCAGCCTCATCTTCCCACCATTGAGAAGCGAC +
Preference number: 6 (lower is better)
Translates to: FSTARSAPRCSV*VSLIFPPLRSD
Trigger: GTCGCTTCTCAATGGTGGGAAGATGAGGCTGACGCAGACCGAGCACCTGGGAGCGCTTCTCGCTGTGCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS GCA 72 bp ACTCACATTCGCCTGGTCCATGCTGAGCCCTGGTGCTaGTTCCACTTCACCACAGGGCTCCTCCTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: THIRLVHAEPWC*FHFTTGLLLFL
Trigger: GAGGAAGAGGAGGAGCCCTGTGGTGAAGTGGAAGCAGCACCAGGGCTCAGCATGGACCAGGCGAATGTGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CCA 72 bp AATCTGCTTGTCGTTCGGCAGACTGCTGAAGGCCTCTaGCAAGATGGAGGACAGGGCATCACAGGCGCTCGC +
Preference number: 6 (lower is better)
Translates to: NLLVVRQTAEGL*QDGGQGITGAR
Trigger: GCGAGCGCCTGTGATGCCCTGTCCTCCATCTTGCCAGAGGCCTTCAGCAGTCTGCCGAACGACAAGCAGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CCA 72 bp ACTCTGTGTATGTGCTTCAGGGCCACTCGGACCATCTaGACTCTTTCCTGTGGGGTGTGGACTGCTCCGGGG +
Preference number: 6 (lower is better)
Translates to: TLCMCFRATRTI*TLSCGVWTAPG
Trigger: CCCCGGAGCAGTCCACACCCCACAGGAAAGAGTCCAGATGGTCCGAGTGGCCCTGAAGCACATACACAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CAA 90 bp CTCCAGATCTGGATGAACTGTTCTAGGGACCCGTACTGTCCTCTCTaGCTCGGAACGGAGAGGGCTGCGGCAGATCTGATGCGCACTTTG +
Preference number: 6 (lower is better)
Translates to: LQIWMNCSRDPYCPL*LGTERAAADLMRTL
Trigger: CAAAGTGCGCATCAGATCTGCCGCAGCCCTCTCCGTTCCGAGCAAGAGAGGACAGTACGGGTCCCTAGAACAGTTCATCCAGATCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS GCA 72 bp CAGGAGCTTCACGCCGTGGAGCTGAATGGATGGGTTTaGCTCACACATGCACTTACAGATCACCTCGCCCAG +
Preference number: 6 (lower is better)
Translates to: QELHAVELNGWV*LTHALTDHLAQ
Trigger: CTGGGCGAGGTGATCTGTAAGTGCATGTGTGAGGCAAACCCATCCATTCAGCTCCACGGCGTGAAGCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS GCA 72 bp GCTGTGTCTCCAGCCAGTGTCTGCACTCTGTGTATGTaGTTCAGGGCCACTCGGACCATCTGGACTCTTTCC +
Preference number: 6 (lower is better)
Translates to: AVSPASVCTLCM*FRATRTIWTLS
Trigger: GGAAAGAGTCCAGATGGTCCGAGTGGCCCTGAAGCACATACACAGAGTGCAGACACTGGCTGGAGACACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CCA 72 bp CAGCATCGCAGTCCAGAACACCACCACCAGGTGGACTaGCACTCTCTGTTCAGGCGCTATGTTGGAATCTGG +
Preference number: 6 (lower is better)
Translates to: QHRSPEHHHQVD*HSLFRRYVGIW
Trigger: CCAGATTCCAACATAGCGCCTGAACAGAGAGTGCCAGTCCACCTGGTGGTGGTGTTCTGGACTGCGATGCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CCA 72 bp CCACTCAGCATCGCAGTCCAGAACACCACCACCAGGTaGACTGGCACTCTCTGTTCAGGCGCTATGTTGGAA +
Preference number: 6 (lower is better)
Translates to: PLSIAVQNTTTR*TGTLCSGAMLE
Trigger: TTCCAACATAGCGCCTGAACAGAGAGTGCCAGTCCACCTGGTGGTGGTGTTCTGGACTGCGATGCTGAGTGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CAA 72 bp CCAGGAGCTTCACGCCGTGGAGCTGAATGGATGGGTTaGCCTCACACATGCACTTACAGATCACCTCGCCCA +
Preference number: 6 (lower is better)
Translates to: PGASRRGAEWMG*PHTCTYRSPRP
Trigger: TGGGCGAGGTGATCTGTAAGTGCATGTGTGAGGCAAACCCATCCATTCAGCTCCACGGCGTGAAGCTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CAA 72 bp TGGATGAACTGTTCTAGGGACCCGTACTGTCCTCTCTaGCTCGGAACGGAGAGGGCTGCGGCAGATCTGATG +
Preference number: 6 (lower is better)
Translates to: WMNCSRDPYCPL*LGTERAAADLM
Trigger: CATCAGATCTGCCGCAGCCCTCTCCGTTCCGAGCAAGAGAGGACAGTACGGGTCCCTAGAACAGTTCATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CAA 90 bp CCAGTTCTTCCAGGAGCTTCACGCCGTGGAGCTGAATGGATGGGTTaGCCTCACACATGCACTTACAGATCACCTCGCCCAGCTCCATCA +
Preference number: 6 (lower is better)
Translates to: PVLPGASRRGAEWMG*PHTCTYRSPRPAPS
Trigger: TGATGGAGCTGGGCGAGGTGATCTGTAAGTGCATGTGTGAGGCAAACCCATCCATTCAGCTCCACGGCGTGAAGCTCCTGGAAGAACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS TCA 72 bp GGCTGCTGGGGTTTAACAGGAGATCGCCCATCATACTaGGGAAGTGGAGTTGGGTATAGCACTGCGGGCATC +
Preference number: 6 (lower is better)
Translates to: GCWGLTGDRPSY*GSGVGYSTAGI
Trigger: GATGCCCGCAGTGCTATACCCAACTCCACTTCCTCAGTATGATGGGCGATCTCCTGTTAAACCCCAGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS TCA 72 bp GCACCCAGTTCTTCCAGGAGCTTCACGCCGTGGAGCTaGATGGATGGGTTTGCCTCACACATGCACTTACAG +
Preference number: 6 (lower is better)
Translates to: APSSSRSFTPWS*MDGFASHMHLQ
Trigger: CTGTAAGTGCATGTGTGAGGCAAACCCATCCATTCAGCTCCACGGCGTGAAGCTCCTGGAAGAACTGGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS TCA 72 bp CCTGGCAGATGTGAGTCCGCAGGCTGGCACAGTACTTaGACTCCAGGAAGTCTGTGGTGTCTTCGCTCTTCT +
Preference number: 6 (lower is better)
Translates to: PGRCESAGWHST*TPGSLWCLRSS
Trigger: AGAAGAGCGAAGACACCACAGACTTCCTGGAGTTCAAGTACTGTGCCAGCCTGCGGACTCACATCTGCCAGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS GCA 72 bp CGCCGTGGAGCTGAATGGATGGGTTTGCCTCACACATaGACTTACAGATCACCTCGCCCAGCTCCATCAAGT +
Preference number: 6 (lower is better)
Translates to: RRGAEWMGLPHT*TYRSPRPAPSS
Trigger: ACTTGATGGAGCTGGGCGAGGTGATCTGTAAGTGCATGTGTGAGGCAAACCCATCCATTCAGCTCCACGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS GCA 72 bp CCCGTACTGTCCTCTCTTGCTCGGAACGGAGAGGGCTaGGGCAGATCTGATGCGCACTTTGAAGTTTTTGCA +
Preference number: 6 (lower is better)
Translates to: PVLSSLARNGEG*GRSDAHFEVFA
Trigger: TGCAAAAACTTCAAAGTGCGCATCAGATCTGCCGCAGCCCTCTCCGTTCCGAGCAAGAGAGGACAGTACGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS GCA 72 bp TTGAACTCCAGGAAGTCTGTGGTGTCTTCGCTCTTCTaGAGGGCAGTGACCAGCGCACTCCAGATCTGGATG +
Preference number: 6 (lower is better)
Translates to: LNSRKSVVSSLF*RAVTSALQIWM
Trigger: CATCCAGATCTGGAGTGCGCTGGTCACTGCCCTGCAGAAGAGCGAAGACACCACAGACTTCCTGGAGTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CCA 72 bp ACTCCAAGGGCCCTGGAGGTGGCGGCTTTCACTAGATaGTTCTTGCTGTCATTCAGGCCGAGCAACACTGTA +
Preference number: 6 (lower is better)
Translates to: TPRALEVAAFTR*FLLSFRPSNTV
Trigger: TACAGTGTTGCTCGGCCTGAATGACAGCAAGAACCATCTAGTGAAAGCCGCCACCTCCAGGGCCCTTGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CAA 72 bp AGGGCCCTGGAGGTGGCGGCTTTCACTAGATGGTTCTaGCTGTCATTCAGGCCGAGCAACACTGTAATGCAC +
Preference number: 6 (lower is better)
Translates to: RALEVAAFTRWF*LSFRPSNTVMH
Trigger: GTGCATTACAGTGTTGCTCGGCCTGAATGACAGCAAGAACCATCTAGTGAAAGCCGCCACCTCCAGGGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS TCA 72 bp CACAGGCACGGGTCTTTGGAGACGGGTCCTTTAATGTaGGCGTCATTAAGGACACTGACTGTGGGCTTCCGA +
Preference number: 6 (lower is better)
Translates to: HRHGSLETGPLM*ASLRTLTVGFR
Trigger: TCGGAAGCCCACAGTCAGTGTCCTTAATGACGCTCACATTAAAGGACCCGTCTCCAAAGACCCGTGCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS TCA 72 bp GACCGAATCATATCCCCATGCAGCTTAAGAGTTTCTTaGATGCCGGGCAGGTCTGAGGCACTGGCTAGGCTC +
Preference number: 6 (lower is better)
Translates to: DRIISPCSLRVS*MPGRSEALARL
Trigger: GAGCCTAGCCAGTGCCTCAGACCTGCCCGGCATTCAAGAAACTCTTAAGCTGCATGGGGATATGATTCGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CCA 72 bp CCAGGTGGACTGGCACTCTCTGTTCAGGCGCTATGTTaGAATCTGGCTTGTACTGCTGTATCAAGCCTGCAC +
Preference number: 6 (lower is better)
Translates to: PGGLALSVQALC*NLACTAVSSLH
Trigger: GTGCAGGCTTGATACAGCAGTACAAGCCAGATTCCAACATAGCGCCTGAACAGAGAGTGCCAGTCCACCTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CCA 72 bp ACGGGAAAAGCACGTAGACTCCAAGGGCCCTGGAGGTaGCGGCTTTCACTAGATGGTTCTTGCTGTCATTCA +
Preference number: 6 (lower is better)
Translates to: TGKARRLQGPWR*RLSLDGSCCHS
Trigger: TGAATGACAGCAAGAACCATCTAGTGAAAGCCGCCACCTCCAGGGCCCTTGGAGTCTACGTGCTTTTCCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CAA 90 bp AGGTGGACTGGCACTCTCTGTTCAGGCGCTATGTTGGAATCTGGCTaGTACTGCTGTATCAAGCCTGCACCCAGTTCTTCCAGGAGCTTC +
Preference number: 6 (lower is better)
Translates to: RWTGTLCSGAMLESG*YCCIKPAPSSSRSF
Trigger: GAAGCTCCTGGAAGAACTGGGTGCAGGCTTGATACAGCAGTACAAGCCAGATTCCAACATAGCGCCTGAACAGAGAGTGCCAGTCCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CAA 90 bp AACACCACCACCAGGTGGACTGGCACTCTCTGTTCAGGCGCTATGTaGGAATCTGGCTTGTACTGCTGTATCAAGCCTGCACCCAGTTCT +
Preference number: 6 (lower is better)
Translates to: NTTTRWTGTLCSGAM*ESGLYCCIKPAPSS
Trigger: AGAACTGGGTGCAGGCTTGATACAGCAGTACAAGCCAGATTCCAACATAGCGCCTGAACAGAGAGTGCCAGTCCACCTGGTGGTGGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS GCA 72 bp TATGTTGGAATCTGGCTTGTACTGCTGTATCAAGCCTaGACCCAGTTCTTCCAGGAGCTTCACGCCGTGGAG +
Preference number: 6 (lower is better)
Translates to: YVGIWLVLLYQA*TQFFQELHAVE
Trigger: CTCCACGGCGTGAAGCTCCTGGAAGAACTGGGTGCAGGCTTGATACAGCAGTACAAGCCAGATTCCAACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS GCA 72 bp CTCTGTTCAGGCGCTATGTTGGAATCTGGCTTGTACTaGTGTATCAAGCCTGCACCCAGTTCTTCCAGGAGC +
Preference number: 6 (lower is better)
Translates to: LCSGAMLESGLY*CIKPAPSSSRS
Trigger: GCTCCTGGAAGAACTGGGTGCAGGCTTGATACAGCAGTACAAGCCAGATTCCAACATAGCGCCTGAACAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS GCA 72 bp TCATTCAGGCCGAGCAACACTGTAATGCACAAAATCTaGTTGTCGTTCGGCAGACTGCTGAAGGCCTCTGGC +
Preference number: 6 (lower is better)
Translates to: SFRPSNTVMHKI*LSFGRLLKASG
Trigger: GCCAGAGGCCTTCAGCAGTCTGCCGAACGACAAGCAGATTTTGTGCATTACAGTGTTGCTCGGCCTGAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CCA 72 bp CAGCAACAGAAAGGAACTGCTTTGAGCCTTCCAAGATaGCAGACAGGACTTGAAGAGCACAGGCACGGGTCT +
Preference number: 6 (lower is better)
Translates to: QQQKGTALSLPR*QTGLEEHRHGS
Trigger: AGACCCGTGCCTGTGCTCTTCAAGTCCTGTCTGCCATCTTGGAAGGCTCAAAGCAGTTCCTTTCTGTTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CCA 72 bp TTCTTCCAGGAGCTTCACGCCGTGGAGCTGAATGGATaGGTTTGCCTCACACATGCACTTACAGATCACCTC +
Preference number: 6 (lower is better)
Translates to: FFQELHAVELNG*VCLTHALTDHL
Trigger: GAGGTGATCTGTAAGTGCATGTGTGAGGCAAACCCATCCATTCAGCTCCACGGCGTGAAGCTCCTGGAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CCA 72 bp GACTGGCACTCTCTGTTCAGGCGCTATGTTGGAATCTaGCTTGTACTGCTGTATCAAGCCTGCACCCAGTTC +
Preference number: 6 (lower is better)
Translates to: DWHSLFRRYVGI*LVLLYQACTQF
Trigger: GAACTGGGTGCAGGCTTGATACAGCAGTACAAGCCAGATTCCAACATAGCGCCTGAACAGAGAGTGCCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CCA 72 bp GAGTATCTGTCAGGTTGCCCAGGGACCAGGCTGCTTTaGCGCGCACGTTTAGTGACTTATCTTGAAGTGACA +
Preference number: 6 (lower is better)
Translates to: EYLSGCPGTRLL*RARLVTYLEVT
Trigger: TGTCACTTCAAGATAAGTCACTAAACGTGCGCGCCAAAGCAGCCTGGTCCCTGGGCAACCTGACAGATACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CAA 72 bp GGCACTCTCTGTTCAGGCGCTATGTTGGAATCTGGCTaGTACTGCTGTATCAAGCCTGCACCCAGTTCTTCC +
Preference number: 6 (lower is better)
Translates to: GTLCSGAMLESG*YCCIKPAPSSS
Trigger: GGAAGAACTGGGTGCAGGCTTGATACAGCAGTACAAGCCAGATTCCAACATAGCGCCTGAACAGAGAGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CAA 72 bp ACCAGGTGGACTGGCACTCTCTGTTCAGGCGCTATGTaGGAATCTGGCTTGTACTGCTGTATCAAGCCTGCA +
Preference number: 6 (lower is better)
Translates to: TRWTGTLCSGAM*ESGLYCCIKPA
Trigger: TGCAGGCTTGATACAGCAGTACAAGCCAGATTCCAACATAGCGCCTGAACAGAGAGTGCCAGTCCACCTGGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CAA 72 bp TTCAGGCCGAGCAACACTGTAATGCACAAAATCTGCTaGTCGTTCGGCAGACTGCTGAAGGCCTCTGGCAAG +
Preference number: 6 (lower is better)
Translates to: FRPSNTVMHKIC*SFGRLLKASGK
Trigger: CTTGCCAGAGGCCTTCAGCAGTCTGCCGAACGACAAGCAGATTTTGTGCATTACAGTGTTGCTCGGCCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS TCA 72 bp ACTGCGGGCATCTCTATGTTTAATCCAGGGAGTCCGTaGAACATGGCTTTCTTCAGCACAGCGAGAAGCGCT +
Preference number: 6 (lower is better)
Translates to: TAGISMFNPGSP*NMAFFSTARSA
Trigger: AGCGCTTCTCGCTGTGCTGAAGAAAGCCATGTTTCACGGACTCCCTGGATTAAACATAGAGATGCCCGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS TCA 72 bp CAACAGTGGAGATCAGAGCCTGTATGGACTCCTCAATaGTTTCAGCGAACCTGGGCCTTTCTACGTGAGAGG +
Preference number: 6 (lower is better)
Translates to: QQWRSEPVWTPQ*FQRTWAFLRER
Trigger: CCTCTCACGTAGAAAGGCCCAGGTTCGCTGAAATCATTGAGGAGTCCATACAGGCTCTGATCTCCACTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS TCA 72 bp CCACGAAGCATCACCTGTTCTCCTGAGGAGTCACAGTaGACGGTCAGGATGTCCTCTAAGAATCCCATGATG +
Preference number: 6 (lower is better)
Translates to: PRSITCSPEESQ*TVRMSSKNPMM
Trigger: CATCATGGGATTCTTAGAGGACATCCTGACCGTTCACTGTGACTCCTCAGGAGAACAGGTGATGCTTCGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS GCA 72 bp GAACCTTGGCCTGGTATGACCTCATTTTACCCTGCATaGCTCCTTCTGCATCCGAATAGTCTGACTCACTGC +
Preference number: 6 (lower is better)
Translates to: EPWPGMTSFYPA*LLLHPNSLTHC
Trigger: GCAGTGAGTCAGACTATTCGGATGCAGAAGGAGGCATGCAGGGTAAAATGAGGTCATACCAGGCCAAGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CCA 72 bp GCATCTCTATGTTTAATCCAGGGAGTCCGTGAAACATaGCTTTCTTCAGCACAGCGAGAAGCGCTCCCAGGT +
Preference number: 6 (lower is better)
Translates to: ASLCLIQGVRET*LSSAQREALPG
Trigger: ACCTGGGAGCGCTTCTCGCTGTGCTGAAGAAAGCCATGTTTCACGGACTCCCTGGATTAAACATAGAGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CAA 90 bp GGCCCGGACCGCATTGCTTTTGACCTTGTCTTTGTCTGTGGAGGCTaGTATTGCACACTGCAACATTTTCAAGAGCAGGAGTCCAGAGAA +
Preference number: 6 (lower is better)
Translates to: GPDRIAFDLVFVCGG*YCTLQHFQEQESRE
Trigger: TTCTCTGGACTCCTGCTCTTGAAAATGTTGCAGTGTGCAATACAAGCCTCCACAGACAAAGACAAGGTCAAAAGCAATGCGGTCCGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CCA 72 bp GCAATTGTGACTGAGAAGGGCGTGAAAGCCCGTTTGTaGTCACTAGTGTCTTCAGCAACAGAAAGGAACTGC +
Preference number: 6 (lower is better)
Translates to: AIVTEKGVKARL*SLVSSATERNC
Trigger: GCAGTTCCTTTCTGTTGCTGAAGACACTAGTGACCACAAACGGGCTTTCACGCCCTTCTCAGTCACAATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS TCA 72 bp TCTGTGCAACTCTCTAATGCTGGATGCAATTGTGACTaGGAAGGGCGTGAAAGCCCGTTTGTGGTCACTAGT +
Preference number: 6 (lower is better)
Translates to: SVQLSNAGCNCD*EGRESPFVVTS
Trigger: ACTAGTGACCACAAACGGGCTTTCACGCCCTTCTCAGTCACAATTGCATCCAGCATTAGAGAGTTGCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CAA 72 bp GATGCAATTGTGACTGAGAAGGGCGTGAAAGCCCGTTaGTGGTCACTAGTGTCTTCAGCAACAGAAAGGAAC +
Preference number: 6 (lower is better)
Translates to: DAIVTEKGVKAR*WSLVSSATERN
Trigger: GTTCCTTTCTGTTGCTGAAGACACTAGTGACCACAAACGGGCTTTCACGCCCTTCTCAGTCACAATTGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CAA 90 bp CTAATGCTGGATGCAATTGTGACTGAGAAGGGCGTGAAAGCCCGTTaGTGGTCACTAGTGTCTTCAGCAACAGAAAGGAACTGCTTTGAG +
Preference number: 6 (lower is better)
Translates to: LMLDAIVTEKGVKAR*WSLVSSATERNCFE
Trigger: CTCAAAGCAGTTCCTTTCTGTTGCTGAAGACACTAGTGACCACAAACGGGCTTTCACGCCCTTCTCAGTCACAATTGCATCCAGCATTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS TCA 72 bp AAGGCTTTATGTGGTTCCAGACTTTGGTTAGCAAGCTaGGTTTCAGACGGTTGTAGGGGGCGTTTGATACTA +
Preference number: 6 (lower is better)
Translates to: KALCGSRLWLAS*VSDGCRGRLIL
Trigger: TAGTATCAAACGCCCCCTACAACCGTCTGAAACTCAGCTTGCTAACCAAAGTCTGGAACCACATAAAGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS TCA 72 bp CAGGCTGCTTTGGCGCGCACGTTTAGTGACTTATCTTaGAGTGACATCAATATAGCATTTGCTGTGTCTGCA +
Preference number: 6 (lower is better)
Translates to: QAALARTFSDLS*SDINIAFAVSA
Trigger: TGCAGACACAGCAAATGCTATATTGATGTCACTTCAAGATAAGTCACTAAACGTGCGCGCCAAAGCAGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS GCA 72 bp GAGGACTCTGCCACCAAAGCTAACAAAAGACATCTGTaGAACTCTCTAATGCTGGATGCAATTGTGACTGAG +
Preference number: 6 (lower is better)
Translates to: EDSATKANKRHL*NSLMLDAIVTE
Trigger: CTCAGTCACAATTGCATCCAGCATTAGAGAGTTGCACAGATGTCTTTTGTTAGCTTTGGTGGCAGAGTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS GCA 72 bp GCTTTTGACCTTGTCTTTGTCTGTGGAGGCTTGTATTaGACACTGCAACATTTTCAAGAGCAGGAGTCCAGA +
Preference number: 6 (lower is better)
Translates to: AFDLVFVCGGLY*TLQHFQEQESR
Trigger: TCTGGACTCCTGCTCTTGAAAATGTTGCAGTGTGCAATACAAGCCTCCACAGACAAAGACAAGGTCAAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CAA 72 bp CGCATTGCTTTTGACCTTGTCTTTGTCTGTGGAGGCTaGTATTGCACACTGCAACATTTTCAAGAGCAGGAG +
Preference number: 6 (lower is better)
Translates to: RIAFDLVFVCGG*YCTLQHFQEQE
Trigger: CTCCTGCTCTTGAAAATGTTGCAGTGTGCAATACAAGCCTCCACAGACAAAGACAAGGTCAAAAGCAATGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CAA 72 bp TTGAAGAATTTCCATGTGTGTCCAAGAGCTACACTGTaGAAGAGCGGAGATCGTGTAGGTCAACAGGAAATC +
Preference number: 6 (lower is better)
Translates to: LKNFHVCPRATL*KSGDRVGQQEI
Trigger: GATTTCCTGTTGACCTACACGATCTCCGCTCTTCAACAGTGTAGCTCTTGGACACACATGGAAATTCTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS TCA 72 bp GACATAAGTTTGCCATACAGTGTACTGCAGCTCTCCTaGCTTCAGGGTCAGAGTGAGATAAATCACTCAATT +
Preference number: 6 (lower is better)
Translates to: DISLPYSVLQLS*LQGQSEINHSI
Trigger: AATTGAGTGATTTATCTCACTCTGACCCTGAAGTCAGGAGAGCTGCAGTACACTGTATGGCAAACTTATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8
CDS CAA 90 bp TCTGTAACAGCATGCAAAATGTTATATCATCCATATCAGACGATTTaGGAGACTGTAAAATGGTCAAGAAAGCTTGGAAGCAGACATGCT +
Preference number: 6 (lower is better)
Translates to: SVTACKMLYHPYQTI*ETVKWSRKLGSRHA
Trigger: AGCATGTCTGCTTCCAAGCTTTCTTGACCATTTTACAGTCTCCAAAATCGTCTGATATGGATGATATAACATTTTGCATGCTGTTACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000001002.8