Pregenerated sensors for HEATR5A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035181Ensembl transcript IDs: ENSMUST00000040583.7, ENSMUST00000217966.2
Found 320 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTaGGTAATTCTAGATTTGGTTCTTTGTTTGAGACAGGTTTCTCTG | + |
Preference number: 1 (lower is better) Translates to: LKPHSGAEAVSPVIS*VILDLVLCLRQVSL Trigger: CAGAGAAACCTGTCTCAAACAAAGAACCAAATCTAGAATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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3UTR CCA 90 bp | GTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTaGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTCTGTCCCTG | + |
Preference number: 1 (lower is better) Translates to: VFTYKHNKTESTTCS*SNQFFSILATPLSL Trigger: CAGGGACAGAGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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3UTR-3UTR TCA 90 bp | CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGCTCAGTCTCCTCAGGTaGGTGCCACCCTCCCCTGCT | + |
Preference number: 2 (lower is better) Translates to: LKRQNHETTASSHTVGLKLSLLR*VPPSPA Trigger: AGCAGGGGAGGGTGGCACTCACCTGAGGAGACTGAG...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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3UTR-3UTR GCA 90 bp | TTGATACGACCACTGAATAAGGCAGGAGTCCATGTAGAAAGTGGGATGTGGTGTAACAGGATCTCCAAGTaGACTCGTGCCTCAAGTTCC | + |
Preference number: 2 (lower is better) Translates to: LIRPLNKAGVHVESGMWCNRISK*TRASSS Trigger: GGAACTTGAGGCACGAGTGCACTTGGAGATCCTGTT...ACACCACATCCCACTTTCTACATGGACTCCTGCCTTATTCAGTGGTCGTATCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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3UTR-3UTR TCA 90 bp | CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGATTGTTGATGTTGCTTaGGAAATGCAACACAGTTTG | + |
Preference number: 2 (lower is better) Translates to: LKRQNHETTASSHTVGLKIVDVA*EMQHSL Trigger: CAAACTGTGTTGCATTTCTCAAGCAACATCAACAAT...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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3UTR-3UTR GCA 90 bp | GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTATTTTAACAGGAAGCTaGATCATTCTGACACAGTGG | + |
Preference number: 2 (lower is better) Translates to: ESTTCSWSNQFFSILATPILTGS*IILTQW Trigger: CCACTGTGTCAGAATGATGCAGCTTCCTGTTAAAAT...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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3UTR-3UTR CCA 90 bp | TTGATACGACCACTGAATAAGGCAGGAGTCCATGTAGAAAGTGGGATGTGGTGTGTAAATTTGGATCTTTaGCACTTTCTTGAAATGCCT | + |
Preference number: 2 (lower is better) Translates to: LIRPLNKAGVHVESGMWCVNLDL*HFLEMP Trigger: AGGCATTTCAAGAAAGTGCCAAAGATCCAAATTTAC...ACACCACATCCCACTTTCTACATGGACTCCTGCCTTATTCAGTGGTCGTATCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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3UTR-3UTR CCA 90 bp | GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTAGAACAATACTGAAGTaGAGGGAAAATGATCGTAAA | + |
Preference number: 2 (lower is better) Translates to: ESTTCSWSNQFFSILATPRTILK*RENDRK Trigger: TTTACGATCATTTTCCCTCCACTTCAGTATTGTTCT...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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3UTR-3UTR TCA 90 bp | ATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGATTTGGTTCTTTGTTTaGGACAGGTTTCTCTGTGTA | + |
Preference number: 2 (lower is better) Translates to: IKQSPPRALGLISFSQFWIWFFV*DRFLCV Trigger: TACACAGAGAAACCTGTCTCAAACAAAGAACCAAAT...CCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTCTGTTTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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3UTR-3UTR TCA 90 bp | AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTCACACAGAACAATACTaGAGTGGAGGGAAAATGATC | + |
Preference number: 2 (lower is better) Translates to: RVFTYKHNKTESTTCSWSHTEQY*SGGKMI Trigger: GATCATTTTCCCTCCACTTCAGTATTGTTCTGTGTG...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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3UTR-3UTR TCA 90 bp | GTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATCCCTGCTCTAATTGTTaGTGTTGCTTGAGAAATGCA | + |
Preference number: 2 (lower is better) Translates to: VFTYKHNKTESTTCSWSNPCSNC*CCLRNA Trigger: TGCATTTCTCAAGCAACATCAACAATTAGAGCAGGG...ATTAGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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3UTR TCA 72 bp | ATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTaGAGCTGTCTCTCCTGTTATAAGTTGGGTAATTCT | + |
Preference number: 3 (lower is better) Translates to: IMRPQPQATQWG*SCLSCYKLGNS Trigger: AGAATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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3UTR-3UTR CAA 90 bp | CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTAGGCTGGTTGGAACTTaGATGATCATCCTGTCTCAG | + |
Preference number: 3 (lower is better) Translates to: LKPHSGAEAVSPVISWVIRLVGT*MIILSQ Trigger: CTGAGACAGGATGATCATCAAAGTTCCAACCAGCCT...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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3UTR TCA 72 bp | GTGCCACCCTCCCCTGCTCTAATTGTTGATGTTGCTTaGGAAATGCAACACAGTTTGATACGACCACTGAAT | + |
Preference number: 3 (lower is better) Translates to: VPPSPALIVDVA*EMQHSLIRPLN Trigger: ATTCAGTGGTCGTATCAAACTGTGTTGCATTTCTCAAGCAACATCAACAATTAGAGCAGGGGAGGGTGGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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3UTR-3UTR CAA 90 bp | GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTGAAATGCAACACAGTTaGATACGACCACTGAATAAG | + |
Preference number: 3 (lower is better) Translates to: ESTTCSWSNQFFSILATPEMQHS*IRPLNK Trigger: CTTATTCAGTGGTCGTATCAAACTGTGTTGCATTTC...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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3UTR-3UTR CAA 90 bp | GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTGATTTGGTTCTTTGTTaGAGACAGGTTTCTCTGTGT | + |
Preference number: 3 (lower is better) Translates to: ESTTCSWSNQFFSILATPDLVLC*RQVSLC Trigger: ACACAGAGAAACCTGTCTCAAACAAAGAACCAAATC...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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3UTR CCA 72 bp | CACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTaGGTAATTCTAGATTTGGTTCTTTGTTTGAGACAG | + |
Preference number: 3 (lower is better) Translates to: HSGAEAVSPVIS*VILDLVLCLRQ Trigger: CTGTCTCAAACAAAGAACCAAATCTAGAATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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3UTR-3UTR CAA 90 bp | GTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATCCTCAAGTTCCACTTTaGTCCCCAAAGCAAGGAAAC | + |
Preference number: 3 (lower is better) Translates to: VFTYKHNKTESTTCSWSNPQVPL*SPKQGN Trigger: GTTTCCTTGCTTTGGGGACAAAAGTGGAACTTGAGG...ATTAGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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3UTR TCA 72 bp | ATTCTGACACAGTGGTCAATTCACACAGAACAATACTaGAGTGGAGGGAAAATGATCGTAAACAGCCAAAAA | + |
Preference number: 3 (lower is better) Translates to: ILTQWSIHTEQY*SGGKMIVNSQK Trigger: TTTTTGGCTGTTTACGATCATTTTCCCTCCACTTCAGTATTGTTCTGTGTGAATTGACCACTGTGTCAGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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3UTR CCA 72 bp | TACAAACATAATAAAACAGAGTCCACCACGTGCTCTTaGTCTAATCAGTTTTTCTCAATTCTGGCTACACCT | + |
Preference number: 3 (lower is better) Translates to: YKHNKTESTTCS*SNQFFSILATP Trigger: AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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3UTR-3UTR CAA 90 bp | AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTTGGGTAATTCTAGATTaGGTTCTTTGTTTGAGACAG | + |
Preference number: 3 (lower is better) Translates to: RVFTYKHNKTESTTCSWSWVILD*VLCLRQ Trigger: CTGTCTCAAACAAAGAACCAAATCTAGAATTACCCA...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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3UTR-3UTR CAA 90 bp | AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTCTCTCCTGTTATAAGTaGGGTAATTCTAGATTTGGT | + |
Preference number: 3 (lower is better) Translates to: RVFTYKHNKTESTTCSWSLSCYK*GNSRFG Trigger: ACCAAATCTAGAATTACCCAACTTATAACAGGAGAG...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGAGGATGGCCAGGTCCTaGGCAAGGAGCTTGCGCGTG | + |
Preference number: 4 (lower is better) Translates to: LKRQNHETTASSHTVGLKRMARS*ARSLRV Trigger: CACGCGCAAGCTCCTTGCTCAGGACCTGGCCATCCT...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTGCCACCGCAATGCAGTaGAAGCACCAGGCTGCAGCC | + |
Preference number: 4 (lower is better) Translates to: LKPHSGAEAVSPVISWVIATAMQ*KHQAAA Trigger: GGCTGCAGCCTGGTGCTTGCACTGCATTGCGGTGGC...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGCTGGTCCAAGCTTCGTaGCTCTTTTCTGCCCGGGCC | + |
Preference number: 4 (lower is better) Translates to: LKRQNHETTASSHTVGLKLVQAS*LFSARA Trigger: GGCCCGGGCAGAAAAGAGCCACGAAGCTTGGACCAG...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGGGCTCGAAGGAATCCTaGACTCCCACGCAGAAACCC | + |
Preference number: 4 (lower is better) Translates to: LKRQNHETTASSHTVGLKGSKES*TPTQKP Trigger: GGGTTTCTGCGTGGGAGTTCAGGATTCCTTCGAGCC...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTCCCGCTTGTGTGCGCTaGAGTGACAGGCGGCTGTTT | + |
Preference number: 4 (lower is better) Translates to: LKPHSGAEAVSPVISWVIPACVR*SDRRLF Trigger: AAACAGCCGCCTGTCACTTCAGCGCACACAAGCGGG...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTACCAGGCAGCCTGGGTaGTCCTGCATCACTGCACAG | + |
Preference number: 4 (lower is better) Translates to: LKPHSGAEAVSPVISWVITRQPG*SCITAQ Trigger: CTGTGCAGTGATGCAGGATCACCCAGGCTGCCTGGT...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGGACATGCTTTGGCGGTaGTGTCAGGTGGTGTCTCTG | + |
Preference number: 4 (lower is better) Translates to: LKRQNHETTASSHTVGLKDMLWR*CQVVSL Trigger: CAGAGACACCACCTGACATCACCGCCAAAGCATGTC...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGGCTAATCACAGACAGTaGTGGAGGCAGGGGCTTAGG | + |
Preference number: 4 (lower is better) Translates to: LKRQNHETTASSHTVGLKANHRQ*WRQGLR Trigger: CCTAAGCCCCTGCCTCCAGCACTGTCTGTGATTAGC...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGTCCTCCTGGGCTACCTaGCAGCTTAGGGTTCAGTTC | + |
Preference number: 4 (lower is better) Translates to: LKRQNHETTASSHTVGLKSSWAT*QLRVQF Trigger: GAACTGAACCCTAAGCTGGCAGGTAGCCCAGGAGGA...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGAGCCTCCAGACTGCCTaGCAGATCTCCTTTGCAGCA | + |
Preference number: 4 (lower is better) Translates to: LKRQNHETTASSHTVGLKSLQTA*QISFAA Trigger: TGCTGCAAAGGAGATCTGCCAGGCAGTCTGGAGGCT...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTCGCTCGAAGAATGAATaGGACACAGCGGCGACAGCA | + |
Preference number: 4 (lower is better) Translates to: LKPHSGAEAVSPVISWVIRSKNE*DTAATA Trigger: TGCTGTCGCCGCTGTGTCTCATTCATTCTTCGAGCG...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTTTGTGTGCGCTGAAGTaGCAGGCGGCTGTTTTGAGC | + |
Preference number: 4 (lower is better) Translates to: LKPHSGAEAVSPVISWVILCALK*QAAVLS Trigger: GCTCAAAACAGCCGCCTGTCACTTCAGCGCACACAA...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGCCTGACCACTTCAAGTaGAGCCAGTTGAATGGCTGG | + |
Preference number: 4 (lower is better) Translates to: LKRQNHETTASSHTVGLKPDHFK*SQLNGW Trigger: CCAGCCATTCAACTGGCTTCACTTGAAGTGGTCAGG...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGCCAACAAGAGTCTTCTaGTTCTCCCTGACGTCCTCC | + |
Preference number: 4 (lower is better) Translates to: LKRQNHETTASSHTVGLKPTRVF*FSLTSS Trigger: GGAGGACGTCAGGGAGAAGCAGAAGACTCTTGTTGG...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTCCCACGCAGAAACCCTaGTCCCAGCAGTTCCAGAAC | + |
Preference number: 4 (lower is better) Translates to: ESTTCSWSNQFFSILATPPTQKP*SQQFQN Trigger: GTTCTGGAACTGCTGGGAGCAGGGTTTCTGCGTGGG...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | TTGATACGACCACTGAATAAGGCAGGAGTCCATGTAGAAAGTGGGATGTGGTGTGCACAAACCAGCACATaGTGGCTGGCGGCTACATCC | + |
Preference number: 4 (lower is better) Translates to: LIRPLNKAGVHVESGMWCAQTST*WLAATS Trigger: GGATGTAGCCGCCAGCCAGCATGTGCTGGTTTGTGC...ACACCACATCCCACTTTCTACATGGACTCCTGCCTTATTCAGTGGTCGTATCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | TTGATACGACCACTGAATAAGGCAGGAGTCCATGTAGAAAGTGGGATGTGGTGTGAGCAGGGCCTGCAGTaGACGCAGACAAGCCATGAT | + |
Preference number: 4 (lower is better) Translates to: LIRPLNKAGVHVESGMWCEQGLQ*TQTSHD Trigger: ATCATGGCTTGTCTGCGTGCACTGCAGGCCCTGCTC...ACACCACATCCCACTTTCTACATGGACTCCTGCCTTATTCAGTGGTCGTATCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTCCCCCTAAGTACCTATaGAGGGATCCCAGAGCCAGT | + |
Preference number: 4 (lower is better) Translates to: ESTTCSWSNQFFSILATPPPKYL*RDPRAS Trigger: ACTGGCTCTGGGATCCCTGCATAGGTACTTAGGGGG...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGGGTGGGAAGGTAACTTaGAGAGTCATCTTTGCTCCG | + |
Preference number: 4 (lower is better) Translates to: LKRQNHETTASSHTVGLKGGKVT*RVIFAP Trigger: CGGAGCAAAGATGACTCTCCAAGTTACCTTCCCACC...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | CAGTTAGAGGACATACAGACTGTTAGAGGACATCCCTTCATTTTCAAAGCAGTGCCAGCACATGCTGGCTaGCGGCTACATCCGTGGAAC | + |
Preference number: 4 (lower is better) Translates to: QLEDIQTVRGHPFIFKAVPAHAG*RLHPWN Trigger: GTTCCACGGATGTAGCCGCCAGCCAGCATGTGCTGG...CACTGCTTTGAAAATGAAGGGATGTCCTCTAACAGTCTGTATGTCCTCTAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTCGGAGCTGGTCACTGTaGTCTGTGGCAGCCATGAAA | + |
Preference number: 4 (lower is better) Translates to: ESTTCSWSNQFFSILATPRSWSL*SVAAMK Trigger: TTTCATGGCTGCCACAGACCACAGTGACCAGCTCCG...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGCCCTTCACCAAACTCTaGCAGGGTTTCCTTCTCAGA | + |
Preference number: 4 (lower is better) Translates to: LKRQNHETTASSHTVGLKPFTKL*QGFLLR Trigger: TCTGAGAAGGAAACCCTGCCAGAGTTTGGTGAAGGG...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGTTTCTGCCCGGGCCATaGGGGAAGTTAAGATTCCTT | + |
Preference number: 4 (lower is better) Translates to: LKRQNHETTASSHTVGLKFLPGP*GKLRFL Trigger: AAGGAATCTTAACTTCCCCCATGGCCCGGGCAGAAA...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTGGATGCTGGAGTTCCTaGCCAGGTTCTTGGCATGCT | + |
Preference number: 4 (lower is better) Translates to: ESTTCSWSNQFFSILATPGCWSS*PGSWHA Trigger: AGCATGCCAAGAACCTGGCCAGGAACTCCAGCATCC...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | CAGTTAGAGGACATACAGACTGTTAGAGGACATCCCTTCATTTTCAAAGCAGTGCAGGACCTAGCGTCATaGGAGCAGCAACCAACAGCC | + |
Preference number: 4 (lower is better) Translates to: QLEDIQTVRGHPFIFKAVQDLAS*EQQPTA Trigger: GGCTGTTGGTTGCTGCTCTCATGACGCTAGGTCCTG...CACTGCTTTGAAAATGAAGGGATGTCCTCTAACAGTCTGTATGTCCTCTAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTATGGAGTGGAGGAGCTaGCAGGTCTTCATTTGCACC | + |
Preference number: 4 (lower is better) Translates to: ESTTCSWSNQFFSILATPMEWRS*QVFICT Trigger: GGTGCAAATGAAGACCTGTCAGCTCCTCCACTCCAT...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTGCGGCCTTGAGACTCTaGACTCTTCATCGCTTTAAG | + |
Preference number: 4 (lower is better) Translates to: LKPHSGAEAVSPVISWVIAALRL*TLHRFK Trigger: CTTAAAGCGATGAAGAGTGCAGAGTCTCAAGGCCGC...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | TTGATACGACCACTGAATAAGGCAGGAGTCCATGTAGAAAGTGGGATGTGGTGTTTTGCAGCAGCTATCTaGGCCTTCTCTCCAAGCAGG | + |
Preference number: 4 (lower is better) Translates to: LIRPLNKAGVHVESGMWCFAAAI*AFSPSR Trigger: CCTGCTTGGAGAGAAGGCGCAGATAGCTGCTGCAAA...ACACCACATCCCACTTTCTACATGGACTCCTGCCTTATTCAGTGGTCGTATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTACTCTTGCTCGTCTCTaGTGTGTAGAAAGCACCACC | + |
Preference number: 4 (lower is better) Translates to: LKPHSGAEAVSPVISWVITLARL*CVESTT Trigger: GGTGGTGCTTTCTACACAGCAGAGACGAGCAAGAGT...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTCTGTTTCTAGATCTCTaGGGGACGCTGGAAAGACAC | + |
Preference number: 4 (lower is better) Translates to: LKPHSGAEAVSPVISWVILFLDL*GTLERH Trigger: GTGTCTTTCCAGCGTCCCCCAGAGATCTAGAAACAG...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTACTGTGCAGGATAACTaGCCCCCAGGTAACTTCACA | + |
Preference number: 4 (lower is better) Translates to: LKPHSGAEAVSPVISWVITVQDN*PPGNFT Trigger: TGTGAAGTTACCTGGGGGCCAGTTATCCTGCACAGT...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTCTTCGGGTTTCCTCCTaGCTATGTCCTGAAGCTTCT | + |
Preference number: 4 (lower is better) Translates to: LKPHSGAEAVSPVISWVILRVSS*LCPEAS Trigger: AGAAGCTTCAGGACATAGCCAGGAGGAAACCCGAAG...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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3UTR CAA 72 bp | GGATCTCCAAGTGCACTCGTGCCTCAAGTTCCACTTTaGTCCCCAAAGCAAGGAAACACCAAGCGTTACATT | + |
Preference number: 4 (lower is better) Translates to: GSPSALVPQVPL*SPKQGNTKRYI Trigger: AATGTAACGCTTGGTGTTTCCTTGCTTTGGGGACAAAAGTGGAACTTGAGGCACGAGTGCACTTGGAGATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | CAGTTAGAGGACATACAGACTGTTAGAGGACATCCCTTCATTTTCAAAGCAGTGACGAGCACTCTGCTTTaGGCCTGCTCCTGGATGCTT | + |
Preference number: 4 (lower is better) Translates to: QLEDIQTVRGHPFIFKAVTSTLL*ACSWML Trigger: AAGCATCCAGGAGCAGGCTCAAAGCAGAGTGCTCGT...CACTGCTTTGAAAATGAAGGGATGTCCTCTAACAGTCTGTATGTCCTCTAACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGAGTATTGAAGAAAGCTaGGTCAGCAGATCCACAGCA | + |
Preference number: 4 (lower is better) Translates to: LKRQNHETTASSHTVGLKSIEES*VSRSTA Trigger: TGCTGTGGATCTGCTGACTCAGCTTTCTTCAATACT...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTAGAATCAATGGTCAGTaGCAAGGAGTGGAGTGCCCA | + |
Preference number: 4 (lower is better) Translates to: ESTTCSWSNQFFSILATPRINGQ*QGVECP Trigger: TGGGCACTCCACTCCTTGTCACTGACCATTGATTCT...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGGATGCAATGTCTCTCTaGTATCCTGGCACAAGCTTT | + |
Preference number: 4 (lower is better) Translates to: LKRQNHETTASSHTVGLKDAMSL*YPGTSF Trigger: AAAGCTTGTGCCAGGATATCAGAGAGACATTGCATC...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | TTGATACGACCACTGAATAAGGCAGGAGTCCATGTAGAAAGTGGGATGTGGTGTTGTTCCAGAATCACATaGCCCGGAAACTCTGGCTCT | + |
Preference number: 4 (lower is better) Translates to: LIRPLNKAGVHVESGMWCCSRIT*PGNSGS Trigger: AGAGCCAGAGTTTCCGGGTCATGTGATTCTGGAACA...ACACCACATCCCACTTTCTACATGGACTCCTGCCTTATTCAGTGGTCGTATCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTAAGAAGACCAGCAGCTaGAGAGGACCCGTTTCTCAT | + |
Preference number: 4 (lower is better) Translates to: ESTTCSWSNQFFSILATPKKTSS*RGPVSH Trigger: ATGAGAAACGGGTCCTCTTCAGCTGCTGGTCTTCTT...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTCAAACAAGCCAGAACTaGTCTTCGCAGCAACAGGTA | + |
Preference number: 4 (lower is better) Translates to: LKPHSGAEAVSPVISWVIQTSQN*SSQQQV Trigger: TACCTGTTGCTGCGAAGAGCAGTTCTGGCTTGTTTG...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTGCGGCACAGATAATCTaGCTGACCACTTCAAGTGAA | + |
Preference number: 4 (lower is better) Translates to: LKPHSGAEAVSPVISWVIAAQII*LTTSSE Trigger: TTCACTTGAAGTGGTCAGGCAGATTATCTGTGCCGC...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | TTGATACGACCACTGAATAAGGCAGGAGTCCATGTAGAAAGTGGGATGTGGTGTGTTCAAGAAGACACTTaGCAGCAGCACATCGGACAG | + |
Preference number: 4 (lower is better) Translates to: LIRPLNKAGVHVESGMWCVQEDT*QQHIGQ Trigger: CTGTCCGATGTGCTGCTGCCAAGTGTCTTCTTGAAC...ACACCACATCCCACTTTCTACATGGACTCCTGCCTTATTCAGTGGTCGTATCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTGTGAAGCCAGTTGAATaGCTGGTGACTCTCTGGTCA | + |
Preference number: 4 (lower is better) Translates to: ESTTCSWSNQFFSILATPVKPVE*LVTLWS Trigger: TGACCAGAGAGTCACCAGCCATTCAACTGGCTTCAC...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | TTGATACGACCACTGAATAAGGCAGGAGTCCATGTAGAAAGTGGGATGTGGTGTTCTTTAGCTGGATGCTaGAGTTCCTGGCCAGGTTCT | + |
Preference number: 4 (lower is better) Translates to: LIRPLNKAGVHVESGMWCSLAGC*SSWPGS Trigger: AGAACCTGGCCAGGAACTCCAGCATCCAGCTAAAGA...ACACCACATCCCACTTTCTACATGGACTCCTGCCTTATTCAGTGGTCGTATCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | ATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGGAGTCGCTCGAAGAATaGATGAGACACAGCGGCGAC | + |
Preference number: 4 (lower is better) Translates to: IKQSPPRALGLISFSQFWESLEE*MRHSGD Trigger: GTCGCCGCTGTGTCTCATTCATTCTTCGAGCGACTC...CCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTCTGTTTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | TTGATACGACCACTGAATAAGGCAGGAGTCCATGTAGAAAGTGGGATGTGGTGTATCTTGCCCTTTCCATaGGGAATTCCCAAAGGACAG | + |
Preference number: 4 (lower is better) Translates to: LIRPLNKAGVHVESGMWCILPFP*GIPKGQ Trigger: CTGTCCTTTGGGAATTCCTCATGGAAAGGGCAAGAT...ACACCACATCCCACTTTCTACATGGACTCCTGCCTTATTCAGTGGTCGTATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | ATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGGGTCTGTGGCAGCCATaGAAGCCATGCGGATCAAGT | + |
Preference number: 4 (lower is better) Translates to: IKQSPPRALGLISFSQFWGLWQP*KPCGSS Trigger: ACTTGATCCGCATGGCTTTCATGGCTGCCACAGACC...CCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTCTGTTTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | CAGTTAGAGGACATACAGACTGTTAGAGGACATCCCTTCATTTTCAAAGCAGTGGTCAGGTGGTGTCTCTaGAGTGAAGGCTGGTCTAAG | + |
Preference number: 4 (lower is better) Translates to: QLEDIQTVRGHPFIFKAVVRWCL*SEGWSK Trigger: CTTAGACCAGCCTTCACTTCAGAGACACCACCTGAC...CACTGCTTTGAAAATGAAGGGATGTCCTCTAACAGTCTGTATGTCCTCTAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | TTGATACGACCACTGAATAAGGCAGGAGTCCATGTAGAAAGTGGGATGTGGTGTAAGAGAGCAAAATCCTaGAGTGCAGCAAGCCAGAGT | + |
Preference number: 4 (lower is better) Translates to: LIRPLNKAGVHVESGMWCKRAKS*SAASQS Trigger: ACTCTGGCTTGCTGCACTTCAGGATTTTGCTCTCTT...ACACCACATCCCACTTTCTACATGGACTCCTGCCTTATTCAGTGGTCGTATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | CAGTTAGAGGACATACAGACTGTTAGAGGACATCCCTTCATTTTCAAAGCAGTGCTGGCAGATCTCCTTTaGAGCAGCTATCTGCGCCTT | + |
Preference number: 4 (lower is better) Translates to: QLEDIQTVRGHPFIFKAVLADLL*SSYLRL Trigger: AAGGCGCAGATAGCTGCTGCAAAGGAGATCTGCCAG...CACTGCTTTGAAAATGAAGGGATGTCCTCTAACAGTCTGTATGTCCTCTAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTATGCACGTGATAGAGTaGACCCGCAGAATCAATGGT | + |
Preference number: 4 (lower is better) Translates to: ESTTCSWSNQFFSILATPMHVIE*TRRING Trigger: ACCATTGATTCTGCGGGTGCACTCTATCACGTGCAT...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTACAGAGTTCCAGGGTTaGAAAGACCAAAGACTTCCC | + |
Preference number: 4 (lower is better) Translates to: ESTTCSWSNQFFSILATPTEFQG*KDQRLP Trigger: GGGAAGTCTTTGGTCTTTGCAACCCTGGAACTCTGT...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGGTAGTGCCAAGGTTGTaGATCAGATTTCCAAGTTCT | + |
Preference number: 4 (lower is better) Translates to: LKRQNHETTASSHTVGLKVVPRL*IRFPSS Trigger: AGAACTTGGAAATCTGATCCACAACCTTGGCACTAC...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTGAGCGGCTCCAACATTaGCTTGATACTGTTCCAGAA | + |
Preference number: 4 (lower is better) Translates to: ESTTCSWSNQFFSILATPERLQH*LDTVPE Trigger: TTCTGGAACAGTATCAAGCCAATGTTGGAGCCGCTC...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTCAGCTAAGATCTCCATaGTGGAGGCACTCTCATTGT | + |
Preference number: 4 (lower is better) Translates to: ESTTCSWSNQFFSILATPQLRSP*WRHSHC Trigger: ACAATGAGAGTGCCTCCACCATGGAGATCTTAGCTG...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTTCCTTCACATGTTCTTaGGCGGCACAGATAATCTGC | + |
Preference number: 4 (lower is better) Translates to: ESTTCSWSNQFFSILATPSFTCS*AAQIIC Trigger: GCAGATTATCTGTGCCGCCCAAGAACATGTGAAGGA...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTCTTAGGGTTCAGTTCTaGGAGCTGTCTAACGAGGAT | + |
Preference number: 4 (lower is better) Translates to: ESTTCSWSNQFFSILATPLRVQF*ELSNED Trigger: ATCCTCGTTAGACAGCTCCCAGAACTGAACCCTAAG...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | CAGTTAGAGGACATACAGACTGTTAGAGGACATCCCTTCATTTTCAAAGCAGTGTGGATGCTTCTTCATTaGGCAGCAAGCTGTGAGCCA | + |
Preference number: 4 (lower is better) Translates to: QLEDIQTVRGHPFIFKAVWMLLH*AASCEP Trigger: TGGCTCACAGCTTGCTGCTCAATGAAGAAGCATCCA...CACTGCTTTGAAAATGAAGGGATGTCCTCTAACAGTCTGTATGTCCTCTAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTTTGTCGAAGCTAAGTTaGGCTAACCCAGCAGTAAAG | + |
Preference number: 4 (lower is better) Translates to: ESTTCSWSNQFFSILATPLSKLS*ANPAVK Trigger: CTTTACTGCTGGGTTAGCTCAACTTAGCTTCGACAA...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTCAGGGTCTTCGGCTTTaGAGCCTTTCCTCCTGGGCT | + |
Preference number: 4 (lower is better) Translates to: RVFTYKHNKTESTTCSWSQGLRL*SLSSWA Trigger: AGCCCAGGAGGAAAGGCTTCAAAGCCGAAGACCCTG...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTAGGAGATCACCACAGTaGGAAATGAAACTCTTGACA | + |
Preference number: 4 (lower is better) Translates to: LKPHSGAEAVSPVISWVIRRSPQ*EMKLLT Trigger: TGTCAAGAGTTTCATTTCGCACTGTGGTGATCTCCT...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTCTATGGTCGGTCTCCTaGAGCAAAGGACTTAATATC | + |
Preference number: 4 (lower is better) Translates to: ESTTCSWSNQFFSILATPLWSVS*SKGLNI Trigger: GATATTAAGTCCTTTGCTGCAGGAGACCGACCATAG...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTTTGCCAAGCAGGAGCTaGTCTTCAATAAACCTATGG | + |
Preference number: 4 (lower is better) Translates to: ESTTCSWSNQFFSILATPLPSRS*SSINLW Trigger: CCATAGGTTTATTGAAGAGCAGCTCCTGCTTGGCAA...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | TTGATACGACCACTGAATAAGGCAGGAGTCCATGTAGAAAGTGGGATGTGGTGTACTAACAACCCCACTTaGTATCCAAGCACTGCAAAC | + |
Preference number: 4 (lower is better) Translates to: LIRPLNKAGVHVESGMWCTNNPT*YPSTAN Trigger: GTTTGCAGTGCTTGGATAGCAAGTGGGGTTGTTAGT...ACACCACATCCCACTTTCTACATGGACTCCTGCCTTATTCAGTGGTCGTATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTAGCAAAATCCTGAAGTaGAGCAAGCCAGAGTTTGCT | + |
Preference number: 4 (lower is better) Translates to: ESTTCSWSNQFFSILATPSKILK*SKPEFA Trigger: AGCAAACTCTGGCTTGCTGCACTTCAGGATTTTGCT...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTTTCGTGGCTCTTTTCTaGCCGGGCCATGGGGGAAGT | + |
Preference number: 4 (lower is better) Translates to: RVFTYKHNKTESTTCSWSFVALF*PGHGGS Trigger: ACTTCCCCCATGGCCCGGGCAGAAAAGAGCCACGAA...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | CAGTTAGAGGACATACAGACTGTTAGAGGACATCCCTTCATTTTCAAAGCAGTGTACCGAGGCCCAATCTaGATGAGACTGTGCAAAGCA | + |
Preference number: 4 (lower is better) Translates to: QLEDIQTVRGHPFIFKAVYRGPI*MRLCKA Trigger: TGCTTTGCACAGTCTCATGCAGATTGGGCCTCGGTA...CACTGCTTTGAAAATGAAGGGATGTCCTCTAACAGTCTGTATGTCCTCTAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | GTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATCTGGACCAGGCAGCCTaGGTGATCCTGCATCACTGC | + |
Preference number: 4 (lower is better) Translates to: VFTYKHNKTESTTCSWSNLDQAA*VILHHC Trigger: GCAGTGATGCAGGATCACCCAGGCTGCCTGGTCCAG...ATTAGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTCCGGGCTTTCAGGGCTaGGGAAGAAGCCATGACTCT | + |
Preference number: 4 (lower is better) Translates to: RVFTYKHNKTESTTCSWSPGFQG*GRSHDS Trigger: AGAGTCATGGCTTCTTCCCCAGCCCTGAAAGCCCGG...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | TTGATACGACCACTGAATAAGGCAGGAGTCCATGTAGAAAGTGGGATGTGGTGTATGGACGTCAGCATATaGTGCAATGTCTCTCTGATA | + |
Preference number: 4 (lower is better) Translates to: LIRPLNKAGVHVESGMWCMDVSI*CNVSLI Trigger: TATCAGAGAGACATTGCATCATATGCTGACGTCCAT...ACACCACATCCCACTTTCTACATGGACTCCTGCCTTATTCAGTGGTCGTATCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | ATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGGCTTCTTTTCCAGCCTaGATCTTCGTCAGGGAAGAG | + |
Preference number: 4 (lower is better) Translates to: IKQSPPRALGLISFSQFWASFPA*IFVREE Trigger: CTCTTCCCTGACGAAGATTCAGGCTGGAAAAGAAGC...CCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTCTGTTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTCCAAGTCCTGATCACTaGCAATTCTCCACCTGGGCC | + |
Preference number: 4 (lower is better) Translates to: RVFTYKHNKTESTTCSWSPSPDH*QFSTWA Trigger: GGCCCAGGTGGAGAATTGGCAGTGATCAGGACTTGG...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | CAGTTAGAGGACATACAGACTGTTAGAGGACATCCCTTCATTTTCAAAGCAGTGCAGCAGCAAGTTTGGTaGGAAGGTAACTTGGAGAGT | + |
Preference number: 4 (lower is better) Translates to: QLEDIQTVRGHPFIFKAVQQQVW*EGNLES Trigger: ACTCTCCAAGTTACCTTCCCACCAAACTTGCTGCTG...CACTGCTTTGAAAATGAAGGGATGTCCTCTAACAGTCTGTATGTCCTCTAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | AAATGGAAACAAAATAAAACCAGAATTACCAAGAACGTTAAGTTTCGGTCCCTCCAAACCAGCACATGCTaGCTGGCGGCTACATCCGTG | + |
Preference number: 4 (lower is better) Translates to: KWKQNKTRITKNVKFRSLQTSTC*LAATSV Trigger: CACGGATGTAGCCGCCAGCCAGCATGTGCTGGTTTG...GAGGGACCGAAACTTAACGTTCTTGGTAATTCTGGTTTTATTTTGTTTCCATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGTCAGTAAGTTGGAAATaGCAGAAACAACATGCAACT | + |
Preference number: 4 (lower is better) Translates to: LKRQNHETTASSHTVGLKSVSWK*QKQHAT Trigger: AGTTGCATGTTGTTTCTGCCATTTCCAACTTACTGA...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | ATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCACCCGCAGAATCAATaGTCAGTGACAAGGAGTGGA | + |
Preference number: 4 (lower is better) Translates to: IKQSPPRALGLISFSQFWHPQNQ*SVTRSG Trigger: TCCACTCCTTGTCACTGACCATTGATTCTGCGGGTG...CCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTCTGTTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTTCTGCAGACTCAGCATaGTCTCATAGCGGCCTTGAG | + |
Preference number: 4 (lower is better) Translates to: RVFTYKHNKTESTTCSWSSADSA*SHSGLE Trigger: CTCAAGGCCGCTATGAGATCATGCTGAGTCTGCAGA...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTCAGACGGCGTCAATCTaGGTCTGTGTGGCTTTAGGA | + |
Preference number: 4 (lower is better) Translates to: RVFTYKHNKTESTTCSWSQTASI*VCVALG Trigger: TCCTAAAGCCACACAGACGCAGATTGACGCCGTCTG...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTCCTTCCAGGGTCACTTaGCAGGTAAACGAGTCTCCT | + |
Preference number: 4 (lower is better) Translates to: RVFTYKHNKTESTTCSWSPSRVT*QVNESP Trigger: AGGAGACTCGTTTACCTGGCAAGTGACCCTGGAAGG...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTCACAGGCAACACCATTaGCAAGCAGGAGCTGCTCTT | + |
Preference number: 4 (lower is better) Translates to: RVFTYKHNKTESTTCSWSHRQHH*QAGAAL Trigger: AAGAGCAGCTCCTGCTTGGCAATGGTGTTGCCTGTG...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTATCTCTGGGGGACGCTaGAAAGACACACTTCCACAG | + |
Preference number: 4 (lower is better) Translates to: RVFTYKHNKTESTTCSWSISGGR*KDTLPQ Trigger: CTGTGGAAGTGTGTCTTTCCAGCGTCCCCCAGAGAT...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | GTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATAATCACAGACAGTGCTaGAGGCAGGGGCTTAGGCAC | + |
Preference number: 4 (lower is better) Translates to: VFTYKHNKTESTTCSWSNNHRQC*RQGLRH Trigger: GTGCCTAAGCCCCTGCCTCCAGCACTGTCTGTGATT...ATTAGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | ATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGGCTGACGAGCTCCTTTaGTGTGCTTTATGCTGTTCA | + |
Preference number: 4 (lower is better) Translates to: IKQSPPRALGLISFSQFWADELL*CALCCS Trigger: TGAACAGCATAAAGCACACCAAAGGAGCTCGTCAGC...CCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTCTGTTTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | AAATGGAAACAAAATAAAACCAGAATTACCAAGAACGTTAAGTTTCGGTCCCTCCCCAGAGCCAGTGAGTaGCCTGTTCTGGTAACCACA | + |
Preference number: 4 (lower is better) Translates to: KWKQNKTRITKNVKFRSLPRASE*PVLVTT Trigger: TGTGGTTACCAGAACAGGCCACTCACTGGCTCTGGG...GAGGGACCGAAACTTAACGTTCTTGGTAATTCTGGTTTTATTTTGTTTCCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | AAATGGAAACAAAATAAAACCAGAATTACCAAGAACGTTAAGTTTCGGTCCCTCCAGGCCTTGAGAGATTaGCACCGCCTTCATCTGGGT | + |
Preference number: 4 (lower is better) Translates to: KWKQNKTRITKNVKFRSLQALRD*HRLHLG Trigger: ACCCAGATGAAGGCGGTGCCAATCTCTCAAGGCCTG...GAGGGACCGAAACTTAACGTTCTTGGTAATTCTGGTTTTATTTTGTTTCCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | GTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATTCTTCTGCTTCTCCCTaGCGTCCTCCCTGTTTGTTG | + |
Preference number: 4 (lower is better) Translates to: VFTYKHNKTESTTCSWSNSSASP*RPPCLL Trigger: CAACAAACAGGGAGGACGTCAGGGAGAAGCAGAAGA...ATTAGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | AAATGGAAACAAAATAAAACCAGAATTACCAAGAACGTTAAGTTTCGGTCCCTCGCCGGCTTTGGATACTaGAAAATGGAGTGGAGGAGC | + |
Preference number: 4 (lower is better) Translates to: KWKQNKTRITKNVKFRSLAGFGY*KMEWRS Trigger: GCTCCTCCACTCCATTTTTCAGTATCCAAAGCCGGC...GAGGGACCGAAACTTAACGTTCTTGGTAATTCTGGTTTTATTTTGTTTCCATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTGAGGCCCAATCTGCATaGGACTGTGCAAAGCAAAGT | + |
Preference number: 4 (lower is better) Translates to: RVFTYKHNKTESTTCSWSEAQSA*DCAKQS Trigger: ACTTTGCTTTGCACAGTCTCATGCAGATTGGGCCTC...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | ATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCCAGTCAGTATACTCTaGAGACTCAGCATGATCTCA | + |
Preference number: 4 (lower is better) Translates to: IKQSPPRALGLISFSQFWPVSIL*RLSMIS Trigger: TGAGATCATGCTGAGTCTGCAGAGTATACTGACTGG...CCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTCTGTTTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | GTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATTGTCCAGAAGGCCTGTaGTGGAATCCTGGAGCAAAG | + |
Preference number: 4 (lower is better) Translates to: VFTYKHNKTESTTCSWSNCPEGL*WNPGAK Trigger: CTTTGCTCCAGGATTCCAGCACAGGCCTTCTGGACA...ATTAGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTCCACAGCAGCAAGTTTaGTGGGAAGGTAACTTGGAG | + |
Preference number: 4 (lower is better) Translates to: RVFTYKHNKTESTTCSWSPQQQV*WEGNLE Trigger: CTCCAAGTTACCTTCCCACCAAACTTGCTGCTGTGG...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | CAGTTAGAGGACATACAGACTGTTAGAGGACATCCCTTCATTTTCAAAGCAGTGGACGGTTGTCACTTCTaGGCTGGTAGACAAAATAAA | + |
Preference number: 4 (lower is better) Translates to: QLEDIQTVRGHPFIFKAVDGCHF*AGRQNK Trigger: TTTATTTTGTCTACCAGCCCAGAAGTGACAACCGTC...CACTGCTTTGAAAATGAAGGGATGTCCTCTAACAGTCTGTATGTCCTCTAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | GTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATCATTGTACAGCTGGCTaGGAGCTTCTTTTCCAGCCT | + |
Preference number: 4 (lower is better) Translates to: VFTYKHNKTESTTCSWSNHCTAG*ELLFQP Trigger: AGGCTGGAAAAGAAGCTCTCAGCCAGCTGTACAATG...ATTAGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | GTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATCACGCAGACAAGCCATaGTGCTTTCCAAGCTTGCAT | + |
Preference number: 4 (lower is better) Translates to: VFTYKHNKTESTTCSWSNHADKP*CFPSLH Trigger: ATGCAAGCTTGGAAAGCATCATGGCTTGTCTGCGTG...ATTAGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | AAATGGAAACAAAATAAAACCAGAATTACCAAGAACGTTAAGTTTCGGTCCCTCACTCGGACACTTTCCTaGTTGCCTTTTACAGCAGCC | + |
Preference number: 4 (lower is better) Translates to: KWKQNKTRITKNVKFRSLTRTLS*LPFTAA Trigger: GGCTGCTGTAAAAGGCAATCAGGAAAGTGTCCGAGT...GAGGGACCGAAACTTAACGTTCTTGGTAATTCTGGTTTTATTTTGTTTCCATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTGAGCCTGCTCCTGGATaGTTAGCAGTTACAGCTTTA | + |
Preference number: 4 (lower is better) Translates to: RVFTYKHNKTESTTCSWSEPAPG*LAVTAL Trigger: TAAAGCTGTAACTGCTAAGCATCCAGGAGCAGGCTC...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTTCGCCTTCTTCCTCCTaGATTGTATCCACGCAAGTT | + |
Preference number: 4 (lower is better) Translates to: RVFTYKHNKTESTTCSWSSPSSS*IVSTQV Trigger: AACTTGCGTGGATACAATGCAGGAGGAAGAAGGCGA...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | AAATGGAAACAAAATAAAACCAGAATTACCAAGAACGTTAAGTTTCGGTCCCTCTTCAGGAGAGCACACTaGAGGAAGCTCAGCAAGGAT | + |
Preference number: 4 (lower is better) Translates to: KWKQNKTRITKNVKFRSLFRRAH*RKLSKD Trigger: ATCCTTGCTGAGCTTCCTGCAGTGTGCTCTCCTGAA...GAGGGACCGAAACTTAACGTTCTTGGTAATTCTGGTTTTATTTTGTTTCCATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | AAATGGAAACAAAATAAAACCAGAATTACCAAGAACGTTAAGTTTCGGTCCCTCGGAGAATTGAGATGCTaGCTTCAGGAGAGCACACTG | + |
Preference number: 4 (lower is better) Translates to: KWKQNKTRITKNVKFRSLGELRC*LQESTL Trigger: CAGTGTGCTCTCCTGAAGGCAGCATCTCAATTCTCC...GAGGGACCGAAACTTAACGTTCTTGGTAATTCTGGTTTTATTTTGTTTCCATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | GTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATATTCCTTTCAGAGTCTaGAGGGAAGCCGTGACTGTG | + |
Preference number: 4 (lower is better) Translates to: VFTYKHNKTESTTCSWSNIPFRV*REAVTV Trigger: CACAGTCACGGCTTCCCTGCAGACTCTGAAAGGAAT...ATTAGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTTCAGCATATCTCCACTaGCTCGAAGGAATCCTGAAC | + |
Preference number: 4 (lower is better) Translates to: RVFTYKHNKTESTTCSWSSAYLH*LEGILN Trigger: GTTCAGGATTCCTTCGAGCCAGTGGAGATATGCTGA...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | ATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGTCTTCAATAAACCTATaGTCGGTCTCCTGCAGCAAA | + |
Preference number: 4 (lower is better) Translates to: IKQSPPRALGLISFSQFWSSINL*SVSCSK Trigger: TTTGCTGCAGGAGACCGACCATAGGTTTATTGAAGA...CCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTCTGTTTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | AAATGGAAACAAAATAAAACCAGAATTACCAAGAACGTTAAGTTTCGGTCCCTCAGTCACTGCTTCTGGTaGAGACTTGAGTATTGCGAG | + |
Preference number: 4 (lower is better) Translates to: KWKQNKTRITKNVKFRSLSHCFW*RLEYCE Trigger: CTCGCAATACTCAAGTCTTCACCAGAAGCAGTGACT...GAGGGACCGAAACTTAACGTTCTTGGTAATTCTGGTTTTATTTTGTTTCCATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | AAATGGAAACAAAATAAAACCAGAATTACCAAGAACGTTAAGTTTCGGTCCCTCACAGGAACTCCACGCTaGTTCCTAGAATCAGATGGA | + |
Preference number: 4 (lower is better) Translates to: KWKQNKTRITKNVKFRSLTGTPR*FLESDG Trigger: TCCATCTGATTCTAGGAATCAGCGTGGAGTTCCTGT...GAGGGACCGAAACTTAACGTTCTTGGTAATTCTGGTTTTATTTTGTTTCCATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | AAATGGAAACAAAATAAAACCAGAATTACCAAGAACGTTAAGTTTCGGTCCCTCTACTGTAGGGAGAATTaGGATGCTGCCTTCAGGAGA | + |
Preference number: 4 (lower is better) Translates to: KWKQNKTRITKNVKFRSLYCREN*DAAFRR Trigger: TCTCCTGAAGGCAGCATCTCAATTCTCCCTACAGTA...GAGGGACCGAAACTTAACGTTCTTGGTAATTCTGGTTTTATTTTGTTTCCATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | CAGTTAGAGGACATACAGACTGTTAGAGGACATCCCTTCATTTTCAAAGCAGTGATTACCATCACTCAATaGGGCATCCATAACTTTCTT | + |
Preference number: 4 (lower is better) Translates to: QLEDIQTVRGHPFIFKAVITITQ*GIHNFL Trigger: AAGAAAGTTATGGATGCCGCATTGAGTGATGGTAAT...CACTGCTTTGAAAATGAAGGGATGTCCTCTAACAGTCTGTATGTCCTCTAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | AAATGGAAACAAAATAAAACCAGAATTACCAAGAACGTTAAGTTTCGGTCCCTCCCCAAAGAGCTTGGATaGAGAGCTAATCACAGACAG | + |
Preference number: 4 (lower is better) Translates to: KWKQNKTRITKNVKFRSLPKELG*RANHRQ Trigger: CTGTCTGTGATTAGCTCTGCATCCAAGCTCTTTGGG...GAGGGACCGAAACTTAACGTTCTTGGTAATTCTGGTTTTATTTTGTTTCCATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTCGAGCTCCTTTGGTGTaGTTTATGCTGTTCAAAAGC | + |
Preference number: 4 (lower is better) Translates to: RVFTYKHNKTESTTCSWSRAPLV*FMLFKS Trigger: GCTTTTGAACAGCATAAAGCACACCAAAGGAGCTCG...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | AAATGGAAACAAAATAAAACCAGAATTACCAAGAACGTTAAGTTTCGGTCCCTCGGACACTTTCCTGATTaGCTTTTACAGCAGCCTCCA | + |
Preference number: 4 (lower is better) Translates to: KWKQNKTRITKNVKFRSLGHFPD*LLQQPP Trigger: TGGAGGCTGCTGTAAAAGGCAATCAGGAAAGTGTCC...GAGGGACCGAAACTTAACGTTCTTGGTAATTCTGGTTTTATTTTGTTTCCATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTATGACCCGGAAACTCTaGCTCTGCAATATCTGCAAA | + |
Preference number: 4 (lower is better) Translates to: RVFTYKHNKTESTTCSWSMTRKL*LCNICK Trigger: TTTGCAGATATTGCAGAGCCAGAGTTTCCGGGTCAT...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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3UTR CAA 72 bp | GCTGTCTCTCCTGTTATAAGTTGGGTAATTCTAGATTaGGTTCTTTGTTTGAGACAGGTTTCTCTGTGTAGC | + |
Preference number: 4 (lower is better) Translates to: AVSPVISWVILD*VLCLRQVSLCS Trigger: GCTACACAGAGAAACCTGTCTCAAACAAAGAACCAAATCTAGAATTACCCAACTTATAACAGGAGAGACAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | AAATGGAAACAAAATAAAACCAGAATTACCAAGAACGTTAAGTTTCGGTCCCTCAACGTCTCTGCTGACTaGACTGTTTCCTTTCAGCAT | + |
Preference number: 4 (lower is better) Translates to: KWKQNKTRITKNVKFRSLNVSAD*TVSFQH Trigger: ATGCTGAAAGGAAACAGTTCAGTCAGCAGAGACGTT...GAGGGACCGAAACTTAACGTTCTTGGTAATTCTGGTTTTATTTTGTTTCCATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR TCA 90 bp | AAATGGAAACAAAATAAAACCAGAATTACCAAGAACGTTAAGTTTCGGTCCCTCGCTCCAACATTGGCTTaGTACTGTTCCAGAATCACA | + |
Preference number: 4 (lower is better) Translates to: KWKQNKTRITKNVKFRSLAPTLA*YCSRIT Trigger: TGTGATTCTGGAACAGTATCAAGCCAATGTTGGAGC...GAGGGACCGAAACTTAACGTTCTTGGTAATTCTGGTTTTATTTTGTTTCCATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | GTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATCTAAGATCTCCATGGTaGAGGCACTCTCATTGTACA | + |
Preference number: 4 (lower is better) Translates to: VFTYKHNKTESTTCSWSNLRSPW*RHSHCT Trigger: TGTACAATGAGAGTGCCTCCACCATGGAGATCTTAG...ATTAGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CCA 90 bp | GTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATTGGCTGGTGACTCTCTaGTCAAAATTACTCGGTGTA | + |
Preference number: 4 (lower is better) Translates to: VFTYKHNKTESTTCSWSNWLVTL*SKLLGV Trigger: TACACCGAGTAATTTTGACCAGAGAGTCACCAGCCA...ATTAGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR GCA 90 bp | AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTACACAGCAAATCCTCTaGTATTGTCATGATAATCTT | + |
Preference number: 4 (lower is better) Translates to: RVFTYKHNKTESTTCSWSTQQIL*YCHDNL Trigger: AAGATTATCATGACAATAGCAGAGGATTTGCTGTGT...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 90 bp | CAACACTATAAAGGATGGCCAGGTCCTGAGCAAGGAGCTTGCGCGTaGGGGGTCCCGGGGAGCTGTTCAGCAAGGACAGGAGCTGCCCAA | + |
Preference number: 5 (lower is better) Translates to: QHYKGWPGPEQGACA*GVPGSCSARTGAAQ Trigger: TTGGGCAGCTCCTGTCCTTGCTGAACAGCTCCCCGGGACCCCCCACGCGCAAGCTCCTTGCTCAGGACCTGGCCATCCTTTATAGTGTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 90 bp | TCCGGATGGCAAAGGGCTGGCAGTAAGCACGTCGATGCTGCTGCTTaGGTATCAGGGGCCGTCAGCTCGGCAGCCAGCTCTTTGAGGATA | + |
Preference number: 5 (lower is better) Translates to: SGWQRAGSKHVDAAA*VSGAVSSAASSLRI Trigger: TATCCTCAAAGAGCTGGCTGCCGAGCTGACGGCCCCTGATACCCAAGCAGCAGCATCGACGTGCTTACTGCCAGCCCTTTGCCATCCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 90 bp | CAGGTAGGACGGCAAGGCCACCGCAATGCAGTGCAAGCACCAGGCTaGAGCCAGTCGAACAGAAATGCTAGGGTGCAGAACCACCGAGAT | + |
Preference number: 5 (lower is better) Translates to: QVGRQGHRNAVQAPG*SQSNRNARVQNHRD Trigger: ATCTCGGTGGTTCTGCACCCTAGCATTTCTGTTCGACTGGCTGCAGCCTGGTGCTTGCACTGCATTGCGGTGGCCTTGCCGTCCTACCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 90 bp | GGCTCCAGCAGTCAAGCACAGTTGCTAATGCACTTTGGAGGAGGCTaGTCCAAGCTTCGTGGCTCTTTTCTGCCCGGGCCATGGGGGAAG | + |
Preference number: 5 (lower is better) Translates to: GSSSQAQLLMHFGGG*SKLRGSFLPGPWGK Trigger: CTTCCCCCATGGCCCGGGCAGAAAAGAGCCACGAAGCTTGGACCAGCCTCCTCCAAAGTGCATTAGCAACTGTGCTTGACTGCTGGAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 90 bp | CCGTCAACTGGGCTCCAGCAGTCAAGCACAGTTGCTAATGCACTTTaGAGGAGGCTGGTCCAAGCTTCGTGGCTCTTTTCTGCCCGGGCC | + |
Preference number: 5 (lower is better) Translates to: PSTGLQQSSTVANAL*RRLVQASWLFSARA Trigger: GGCCCGGGCAGAAAAGAGCCACGAAGCTTGGACCAGCCTCCTCCAAAGTGCATTAGCAACTGTGCTTGACTGCTGGAGCCCAGTTGACGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS TCA 90 bp | AGCCGCCACCAGTCTACTTCCCTCCTCCAACAGGGTCTTCGGCTTTaGAGCCTTTCCTCCTGGGCTACCTGCCAGCTTAGGGTTCAGTTC | + |
Preference number: 5 (lower is better) Translates to: SRHQSTSLLQQGLRL*SLSSWATCQLRVQF Trigger: GAACTGAACCCTAAGCTGGCAGGTAGCCCAGGAGGAAAGGCTTCAAAGCCGAAGACCCTGTTGGAGGAGGGAAGTAGACTGGTGGCGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 90 bp | CAGTGCAAGCACCAGGCTGCAGCCAGTCGAACAGAAATGCTAGGGTaGAGAACCACCGAGATGACGCTGTCCAGAAGGCCTGTGCTGGAA | + |
Preference number: 5 (lower is better) Translates to: QCKHQAAASRTEMLG*RTTEMTLSRRPVLE Trigger: TTCCAGCACAGGCCTTCTGGACAGCGTCATCTCGGTGGTTCTGCACCCTAGCATTTCTGTTCGACTGGCTGCAGCCTGGTGCTTGCACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS TCA 90 bp | CATGAGAGCAGCAACCAACAGCCATCCCGCTTGTGTGCGCTGAAGTaGCAGGCGGCTGTTTTGAGCAGCGGAACACAGCAAATCCTCTGC | + |
Preference number: 5 (lower is better) Translates to: HESSNQQPSRLCALK*QAAVLSSGTQQILC Trigger: GCAGAGGATTTGCTGTGTTCCGCTGCTCAAAACAGCCGCCTGTCACTTCAGCGCACACAAGCGGGATGGCTGTTGGTTGCTGCTCTCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS TCA 90 bp | GCTGGAAAGACACACTTCCACAGCAGCAGAACTCGAGTGAGGTGGTaGCTGACCACGGCAGGACCTAGCGTCATGAGAGCAGCAACCAAC | + |
Preference number: 5 (lower is better) Translates to: AGKTHFHSSRTRVRW*LTTAGPSVMRAATN Trigger: GTTGGTTGCTGCTCTCATGACGCTAGGTCCTGCCGTGGTCAGTCACCACCTCACTCGAGTTCTGCTGCTGTGGAAGTGTGTCTTTCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS TCA 90 bp | GCCAAGGAACATCGAGCAGGGCCTGCAGTGCACGCAGACAAGCCATaGTGCTTTCCAAGCTTGCATCTGAGCGCAGGGAACACAGGAACT | + |
Preference number: 5 (lower is better) Translates to: AKEHRAGPAVHADKP*CFPSLHLSAGNTGT Trigger: AGTTCCTGTGTTCCCTGCGCTCAGATGCAAGCTTGGAAAGCATCATGGCTTGTCTGCGTGCACTGCAGGCCCTGCTCGATGTTCCTTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS TCA 90 bp | TCCAAAAGGAAGGAGATGAGGATGGGCAGAAGGCAGGCCACCAGCTaGGCGCGGTGCTCTTCTTCCGCAATGGCGACCAAAGCTTCTAAG | + |
Preference number: 5 (lower is better) Translates to: SKRKEMRMGRRQATS*ARCSSSAMATKASK Trigger: CTTAGAAGCTTTGGTCGCCATTGCGGAAGAAGAGCACCGCGCTCAGCTGGTGGCCTGCCTTCTGCCCATCCTCATCTCCTTCCTTTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS TCA 90 bp | AGGTTCTTGGCATGCTTAGAAGGCGGATCCACTCGGACACTTTCCTaGTTGCCTTTTACAGCAGCCTCCAGCCGGGCTTTCAGGGCTGGG | + |
Preference number: 5 (lower is better) Translates to: RFLACLEGGSTRTLS*LPFTAASSRAFRAG Trigger: CCCAGCCCTGAAAGCCCGGCTGGAGGCTGCTGTAAAAGGCAATCAGGAAAGTGTCCGAGTGGATCCGCCTTCTAAGCATGCCAAGAACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 90 bp | CGGGGGACTTCACGGCAGCTCCTGATGATGATGAGCCCTGGCACATaGATGTTGGAGTTACAGGCCTTGAGAGATTGGCACCGCCTTCAT | + |
Preference number: 5 (lower is better) Translates to: RGTSRQLLMMMSPGT*MLELQALRDWHRLH Trigger: ATGAAGGCGGTGCCAATCTCTCAAGGCCTGTAACTCCAACATCCATGTGCCAGGGCTCATCATCATCAGGAGCTGCCGTGAAGTCCCCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 90 bp | ATTCCTTTCAGAGTCTGCAGGGAAGCCGTGACTGTGCAGGATAACTaGCCCCCAGGTAACTTCACAGCCGTTTCCCGGAGGACTCCGATG | + |
Preference number: 5 (lower is better) Translates to: IPFRVCREAVTVQDN*PPGNFTAVSRRTPM Trigger: CATCGGAGTCCTCCGGGAAACGGCTGTGAAGTTACCTGGGGGCCAGTTATCCTGCACAGTCACGGCTTCCCTGCAGACTCTGAAAGGAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS TCA 90 bp | CTCCACATGCACGTGATAGAGTGCACCCGCAGAATCAATGGTCAGTaGCAAGGAGTGGAGTGCCCAGGTCTGCACGTCAGGAGAAGTGCT | + |
Preference number: 5 (lower is better) Translates to: LHMHVIECTRRINGQ*QGVECPGLHVRRSA Trigger: AGCACTTCTCCTGACGTGCAGACCTGGGCACTCCACTCCTTGTCACTGACCATTGATTCTGCGGGTGCACTCTATCACGTGCATGTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040583.7 ENSMUST00000217966.2 |
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CDS GCA 90 bp | GGGGAGCTGTTCAGCAAGGACAGGAGCTGCCCAACAAGAGTCTTCTaGTTCTCCCTGACGTCCTCCCTGTTTGTTGCTAGCAAGAGCTTC | + |
Preference number: 5 (lower is better) Translates to: GELFSKDRSCPTRVF*FSLTSSLFVASKSF Trigger: GAAGCTCTTGCTAGCAACAAACAGGGAGGACGTCAGGGAGAAGCAGAAGACTCTTGTTGGGCAGCTCCTGTCCTTGCTGAACAGCTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 90 bp | TTTAGCCTCCAGACTGCCTGGCAGATCTCCTTTGCAGCAGCTATCTaGGCCTTCTCTCCAAGCAGGCCTCCTAGAGTCGCTCGAAGAATG | + |
Preference number: 5 (lower is better) Translates to: FSLQTAWQISFAAAI*AFSPSRPPRVARRM Trigger: CATTCTTCGAGCGACTCTAGGAGGCCTGCTTGGAGAGAAGGCGCAGATAGCTGCTGCAAAGGAGATCTGCCAGGCAGTCTGGAGGCTAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 90 bp | GGCAGGAGTCGCTGGATGACTTCCTCAGTAAGGAGATCACCACAGTaGGAAATGAAACTCTTGACAGCACAGAGAGCACCGGCTCGGCCT | + |
Preference number: 5 (lower is better) Translates to: GRSRWMTSSVRRSPQ*EMKLLTAQRAPARP Trigger: AGGCCGAGCCGGTGCTCTCTGTGCTGTCAAGAGTTTCATTTCGCACTGTGGTGATCTCCTTACTGAGGAAGTCATCCAGCGACTCCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 90 bp | TCACTGCCAATTCTCCACCTGGGCCAAGGAACATCGAGCAGGGCCTaGAGTGCACGCAGACAAGCCATGATGCTTTCCAAGCTTGCATCT | + |
Preference number: 5 (lower is better) Translates to: SLPILHLGQGTSSRA*SARRQAMMLSKLAS Trigger: AGATGCAAGCTTGGAAAGCATCATGGCTTGTCTGCGTGCACTGCAGGCCCTGCTCGATGTTCCTTGGCCCAGGTGGAGAATTGGCAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 90 bp | CTCTTGACAGCACAGAGAGCACCGGCTCGGCCTTCCAGGGTCACTTaGCAGGTAAACGAGTCTCCTCGGCTCTTTTCTGTTTCTAGATCT | + |
Preference number: 5 (lower is better) Translates to: LLTAQRAPARPSRVT*QVNESPRLFSVSRS Trigger: AGATCTAGAAACAGAAAAGAGCCGAGGAGACTCGTTTACCTGGCAAGTGACCCTGGAAGGCCGAGCCGGTGCTCTCTGTGCTGTCAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 90 bp | GGGTATAAAGGACTCCAATGCAAGAACTCAAGTGCTGAGGCCCTATaGCCCCTAAGTACCTATGCAGGGATCCCAGAGCCAGTGAGTGGC | + |
Preference number: 5 (lower is better) Translates to: GYKGLQCKNSSAEAL*PLSTYAGIPEPVSG Trigger: GCCACTCACTGGCTCTGGGATCCCTGCATAGGTACTTAGGGGGCATAGGGCCTCAGCACTTGAGTTCTTGCATTGGAGTCCTTTATACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040583.7 ENSMUST00000217966.2 |
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CDS CCA 90 bp | TCTGGAGTTCAAGAAGACACTTGGCAGCAGCACATCGGACAGCCATaGATCTGTCTGTTAAGCAGGACCGGGCAGCCTTGTAAACGTCCC | + |
Preference number: 5 (lower is better) Translates to: SGVQEDTWQQHIGQP*ICLLSRTGQPCKRP Trigger: GGGACGTTTACAAGGCTGCCCGGTCCTGCTTAACAGACAGATCCATGGCTGTCCGATGTGCTGCTGCCAAGTGTCTTCTTGAACTCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 90 bp | AGAACCACCGAGATGACGCTGTCCAGAAGGCCTGTGCTGGAATCCTaGAGCAAAGGCGCAGCTGTAGTGCCAAGGTTGTGGATCAGATTT | + |
Preference number: 5 (lower is better) Translates to: RTTEMTLSRRPVLES*SKGAAVVPRLWIRF Trigger: AAATCTGATCCACAACCTTGGCACTACAGCTGCGCCTTTGCTCCAGGATTCCAGCACAGGCCTTCTGGACAGCGTCATCTCGGTGGTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 90 bp | GACAACCCCAAAGAGCTTGGATGCAGAGCTAATCACAGACAGTGCTaGAGGCAGGGGCTTAGGCACAGAGTCTCCTTCTACGTCCTTCTC | + |
Preference number: 5 (lower is better) Translates to: DNPKELGCRANHRQC*RQGLRHRVSFYVLL Trigger: GAGAAGGACGTAGAAGGAGACTCTGTGCCTAAGCCCCTGCCTCCAGCACTGTCTGTGATTAGCTCTGCATCCAAGCTCTTTGGGGTTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS TCA 90 bp | CCATGGGGGAAGTTAAGATTCCTTTCAGAGTCTGCAGGGAAGCCGTaGCTGTGCAGGATAACTGGCCCCCAGGTAACTTCACAGCCGTTT | + |
Preference number: 5 (lower is better) Translates to: PWGKLRFLSESAGKP*LCRITGPQVTSQPF Trigger: AAACGGCTGTGAAGTTACCTGGGGGCCAGTTATCCTGCACAGTCACGGCTTCCCTGCAGACTCTGAAAGGAATCTTAACTTCCCCCATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 90 bp | CTGGTCAAAACCGAGGCATCGTCACCTCTGTCGCCTTCTTCCTCCTaGATTGTATCCACGCAAGTTACAGCTGTAAAGTCAGCGGATGCG | + |
Preference number: 5 (lower is better) Translates to: LVKTEASSPLSPSSS*IVSTQVTAVKSADA Trigger: CGCATCCGCTGACTTTACAGCTGTAACTTGCGTGGATACAATGCAGGAGGAAGAAGGCGACAGAGGTGACGATGCCTCGGTTTTGACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 90 bp | GCCACACTGTCCACGTCTGTGCTCCACATAAAGATGGCCTCATTCTaGAGTTCAAGAAGACACTTGGCAGCAGCACATCGGACAGCCATG | + |
Preference number: 5 (lower is better) Translates to: ATLSTSVLHIKMASF*SSRRHLAAAHRTAM Trigger: CATGGCTGTCCGATGTGCTGCTGCCAAGTGTCTTCTTGAACTCCAGAATGAGGCCATCTTTATGTGGAGCACAGACGTGGACAGTGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 90 bp | TCGGTCTCCTGCAGCAAAGGACTTAATATCAAGAGGTCATCCGGATaGCAAAGGGCTGGCAGTAAGCACGTCGATGCTGCTGCTTGGGTA | + |
Preference number: 5 (lower is better) Translates to: SVSCSKGLNIKRSSG*QRAGSKHVDAAAWV Trigger: TACCCAAGCAGCAGCATCGACGTGCTTACTGCCAGCCCTTTGCCATCCGGATGACCTCTTGATATTAAGTCCTTTGCTGCAGGAGACCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 90 bp | CCTATGCCCCCTAAGTACCTATGCAGGGATCCCAGAGCCAGTGAGTaGCCTGTTCTGGTAACCACATCTCTCGCTGACTTCAATTTGTCG | + |
Preference number: 5 (lower is better) Translates to: PMPPKYLCRDPRASE*PVLVTTSLADFNLS Trigger: CGACAAATTGAAGTCAGCGAGAGATGTGGTTACCAGAACAGGCCACTCACTGGCTCTGGGATCCCTGCATAGGTACTTAGGGGGCATAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 90 bp | AGCAGCAAAGACTCTAGTGGCCCATCGAGGATTACTGAAAGGGTGTaGCTTGTCATCCCCTCTGGTCAAAACCGAGGCATCGTCACCTCT | + |
Preference number: 5 (lower is better) Translates to: SSKDSSGPSRITERV*LVIPSGQNRGIVTS Trigger: AGAGGTGACGATGCCTCGGTTTTGACCAGAGGGGATGACAAGCCACACCCTTTCAGTAATCCTCGATGGGCCACTAGAGTCTTTGCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 90 bp | AGCACAGTTGCTAATGCACTTTGGAGGAGGCTGGTCCAAGCTTCGTaGCTCTTTTCTGCCCGGGCCATGGGGGAAGTTAAGATTCCTTTC | + |
Preference number: 5 (lower is better) Translates to: STVANALWRRLVQAS*LFSARAMGEVKIPF Trigger: GAAAGGAATCTTAACTTCCCCCATGGCCCGGGCAGAAAAGAGCCACGAAGCTTGGACCAGCCTCCTCCAAAGTGCATTAGCAACTGTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 90 bp | TTCCTGATTGCCTTTTACAGCAGCCTCCAGCCGGGCTTTCAGGGCTaGGGAAGAAGCCATGACTCTTTTAAACACAGACGAGTACCGAGG | + |
Preference number: 5 (lower is better) Translates to: FLIAFYSSLQPGFQG*GRSHDSFKHRRVPR Trigger: CCTCGGTACTCGTCTGTGTTTAAAAGAGTCATGGCTTCTTCCCCAGCCCTGAAAGCCCGGCTGGAGGCTGCTGTAAAAGGCAATCAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 90 bp | TCAGTGACAAGGAGTGGAGTGCCCAGGTCTGCACGTCAGGAGAAGTaGTGTCCTGAGACAGGGTATAAAGGACTCCAATGCAAGAACTCA | + |
Preference number: 5 (lower is better) Translates to: SVTRSGVPRSARQEK*CPETGYKGLQCKNS Trigger: TGAGTTCTTGCATTGGAGTCCTTTATACCCTGTCTCAGGACAGCACTTCTCCTGACGTGCAGACCTGGGCACTCCACTCCTTGTCACTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040583.7 ENSMUST00000217966.2 |
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CDS GCA 90 bp | CTGATGAACTCTGCGGAGATCGCTGAGGTCACTAACAACCCCACTTaGTATCCAAGCACTGCAAACCTGACATGCTTTGGCGGTGATGTC | + |
Preference number: 5 (lower is better) Translates to: LMNSAEIAEVTNNPT*YPSTANLTCFGGDV Trigger: GACATCACCGCCAAAGCATGTCAGGTTTGCAGTGCTTGGATAGCAAGTGGGGTTGTTAGTGACCTCAGCGATCTCCGCAGAGTTCATCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 90 bp | TCACTCAATGCGGCATCCATAACTTTCTTTAGCCTCCAGACTGCCTaGCAGATCTCCTTTGCAGCAGCTATCTGCGCCTTCTCTCCAAGC | + |
Preference number: 5 (lower is better) Translates to: SLNAASITFFSLQTA*QISFAAAICAFSPS Trigger: GCTTGGAGAGAAGGCGCAGATAGCTGCTGCAAAGGAGATCTGCCAGGCAGTCTGGAGGCTAAAGAAAGTTATGGATGCCGCATTGAGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CAA 90 bp | CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGGCGGACACGGAAGTATaGCTACCTTGTAGCTCTGGG | + |
Preference number: 5 (lower is better) Translates to: LKRQNHETTASSHTVGLKADTEV*LPCSSG Trigger: CCCAGAGCTACAAGGTAGCAATACTTCCGTGTCCGC...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS TCA 90 bp | TTTCCAAGCTTGCATCTGAGCGCAGGGAACACAGGAACTCCACGCTaGTTCCTAGAATCAGATGGAACCTGTCAGTGTAGACATCCTCGG | + |
Preference number: 5 (lower is better) Translates to: FPSLHLSAGNTGTPR*FLESDGTCQCRHPR Trigger: CCGAGGATGTCTACACTGACAGGTTCCATCTGATTCTAGGAATCAGCGTGGAGTTCCTGTGTTCCCTGCGCTCAGATGCAAGCTTGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 90 bp | CGAAGAATGAATGAGACACAGCGGCGACAGCAGACGGCGTCAATCTaGGTCTGTGTGGCTTTAGGATTTGACTGTGATACAAGGCTTAGG | + |
Preference number: 5 (lower is better) Translates to: RRMNETQRRQQTASI*VCVALGFDCDTRLR Trigger: CCTAAGCCTTGTATCACAGTCAAATCCTAAAGCCACACAGACGCAGATTGACGCCGTCTGCTGTCGCCGCTGTGTCTCATTCATTCTTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 90 bp | TTGTGGATCAGATTTCCAAGTTCTTGTAAAGCACAAACCAGCACATaGTGGCTGGCGGCTACATCCGTGGAACTGAGACGGGTCTCCACA | + |
Preference number: 5 (lower is better) Translates to: LWIRFPSSCKAQTST*WLAATSVELRRVST Trigger: TGTGGAGACCCGTCTCAGTTCCACGGATGTAGCCGCCAGCCAGCATGTGCTGGTTTGTGCTTTACAAGAACTTGGAAATCTGATCCACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 90 bp | CGTCAGGAGAAGTGCTGTCCTGAGACAGGGTATAAAGGACTCCAATaGAAGAACTCAAGTGCTGAGGCCCTATGCCCCCTAAGTACCTAT | + |
Preference number: 5 (lower is better) Translates to: RQEKCCPETGYKGLQ*KNSSAEALCPLSTY Trigger: ATAGGTACTTAGGGGGCATAGGGCCTCAGCACTTGAGTTCTTGCATTGGAGTCCTTTATACCCTGTCTCAGGACAGCACTTCTCCTGACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040583.7 ENSMUST00000217966.2 |
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CDS CCA 90 bp | AGAGAGCAAAATCCTGAAGTGCAGCAAGCCAGAGTTTGCTTAGCGTaGCCAGGTCAGTGCAGACTAAGTCAAGAAGACCAGCAGCTGAAG | + |
Preference number: 5 (lower is better) Translates to: REQNPEVQQARVCLA*PGQCRLSQEDQQLK Trigger: CTTCAGCTGCTGGTCTTCTTGACTTAGTCTGCACTGACCTGGCCACGCTAAGCAAACTCTGGCTTGCTGCACTTCAGGATTTTGCTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CAA 90 bp | TTGATACGACCACTGAATAAGGCAGGAGTCCATGTAGAAAGTGGGATGTGGTGTCCACAGGCAACACCATaGCCAAGCAGGAGCTGCTCT | + |
Preference number: 5 (lower is better) Translates to: LIRPLNKAGVHVESGMWCPQATP*PSRSCS Trigger: AGAGCAGCTCCTGCTTGGCAATGGTGTTGCCTGTGG...ACACCACATCCCACTTTCTACATGGACTCCTGCCTTATTCAGTGGTCGTATCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS TCA 90 bp | TACCACGTAAGCCTGAGTAACTCCGACTCGAACGTCTCTGCTGACTaGACTGTTTCCTTTCAGCATATCTCCACTGGCTCGAAGGAATCC | + |
Preference number: 5 (lower is better) Translates to: YHVSLSNSDSNVSAD*TVSFQHISTGSKES Trigger: GGATTCCTTCGAGCCAGTGGAGATATGCTGAAAGGAAACAGTTCAGTCAGCAGAGACGTTCGAGTCGGAGTTACTCAGGCTTACGTGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 90 bp | GAGTACCGAGGCCCAATCTGCATGAGACTGTGCAAAGCAAAGTCGTaGAGACTTCTCGTTACTGAAGTTGCTGATCCCAGAGCATTCTCA | + |
Preference number: 5 (lower is better) Translates to: EYRGPICMRLCKAKS*RLLVTEVADPRAFS Trigger: TGAGAATGCTCTGGGATCAGCAACTTCAGTAACGAGAAGTCTGCACGACTTTGCTTTGCACAGTCTCATGCAGATTGGGCCTCGGTACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 90 bp | TGGATCAGATTTCCAAGTTCTTGTAAAGCACAAACCAGCACATGCTaGCTGGCGGCTACATCCGTGGAACTGAGACGGGTCTCCACATTA | + |
Preference number: 5 (lower is better) Translates to: WIRFPSSCKAQTSTC*LAATSVELRRVSTL Trigger: TAATGTGGAGACCCGTCTCAGTTCCACGGATGTAGCCGCCAGCCAGCATGTGCTGGTTTGTGCTTTACAAGAACTTGGAAATCTGATCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 90 bp | GTGCTGGAATCCTGGAGCAAAGGCGCAGCTGTAGTGCCAAGGTTGTaGATCAGATTTCCAAGTTCTTGTAAAGCACAAACCAGCACATGC | + |
Preference number: 5 (lower is better) Translates to: VLESWSKGAAVVPRL*IRFPSSCKAQTSTC Trigger: GCATGTGCTGGTTTGTGCTTTACAAGAACTTGGAAATCTGATCCACAACCTTGGCACTACAGCTGCGCCTTTGCTCCAGGATTCCAGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CAA 90 bp | CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGATGCAACTGAACGGTTaGCTGACGAGCTCCTTTGGT | + |
Preference number: 5 (lower is better) Translates to: LKRQNHETTASSHTVGLKMQLNG*LTSSFG Trigger: ACCAAAGGAGCTCGTCAGCAAACCGTTCAGTTGCAT...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS TCA 90 bp | TGGGCGGCACAGATAATCTGCCTGACCACTTCAAGTGAAGCCAGTTaGATGGCTGGTGACTCTCTGGTCAAAATTACTCGGTGTAGTACA | + |
Preference number: 5 (lower is better) Translates to: WAAQIICLTTSSEAS*MAGDSLVKITRCST Trigger: TGTACTACACCGAGTAATTTTGACCAGAGAGTCACCAGCCATTCAACTGGCTTCACTTGAAGTGGTCAGGCAGATTATCTGTGCCGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 90 bp | TCCAGTGACACTCTACGAGCACTCTGCTTTGAGCCTGCTCCTGGATaGTTAGCAGTTACAGCTTTAGCCAACACTGTACCCAACAGTTTT | + |
Preference number: 5 (lower is better) Translates to: SSDTLRALCFEPAPG*LAVTALANTVPNSF Trigger: AAAACTGTTGGGTACAGTGTTGGCTAAAGCTGTAACTGCTAAGCATCCAGGAGCAGGCTCAAAGCAGAGTGCTCGTAGAGTGTCACTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 90 bp | TTGCCAAGCAGGAGCTGCTCTTCAATAAACCTATGGTCGGTCTCCTaGAGCAAAGGACTTAATATCAAGAGGTCATCCGGATGGCAAAGG | + |
Preference number: 5 (lower is better) Translates to: LPSRSCSSINLWSVS*SKGLNIKRSSGWQR Trigger: CCTTTGCCATCCGGATGACCTCTTGATATTAAGTCCTTTGCTGCAGGAGACCGACCATAGGTTTATTGAAGAGCAGCTCCTGCTTGGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 90 bp | GCAAAGTTAAGAGAGCAAAATCCTGAAGTGCAGCAAGCCAGAGTTTaGTTAGCGTGGCCAGGTCAGTGCAGACTAAGTCAAGAAGACCAG | + |
Preference number: 5 (lower is better) Translates to: AKLREQNPEVQQARV*LAWPGQCRLSQEDQ Trigger: CTGGTCTTCTTGACTTAGTCTGCACTGACCTGGCCACGCTAAGCAAACTCTGGCTTGCTGCACTTCAGGATTTTGCTCTCTTAACTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CAA 90 bp | CAGTTAGAGGACATACAGACTGTTAGAGGACATCCCTTCATTTTCAAAGCAGTGCCTGGCAGATCTCCTTaGCAGCAGCTATCTGCGCCT | + |
Preference number: 5 (lower is better) Translates to: QLEDIQTVRGHPFIFKAVPGRSP*QQLSAP Trigger: AGGCGCAGATAGCTGCTGCAAAGGAGATCTGCCAGG...CACTGCTTTGAAAATGAAGGGATGTCCTCTAACAGTCTGTATGTCCTCTAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CAA 90 bp | TTGATACGACCACTGAATAAGGCAGGAGTCCATGTAGAAAGTGGGATGTGGTGTTCGGCAGCCAGCTCTTaGAGGATAACACAGAGGTTC | + |
Preference number: 5 (lower is better) Translates to: LIRPLNKAGVHVESGMWCSAASS*RITQRF Trigger: GAACCTCTGTGTTATCCTCAAAGAGCTGGCTGCCGA...ACACCACATCCCACTTTCTACATGGACTCCTGCCTTATTCAGTGGTCGTATCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CAA 90 bp | TTGATACGACCACTGAATAAGGCAGGAGTCCATGTAGAAAGTGGGATGTGGTGTACCAGACTAGACAAGTaGACATGGCGTGGGGCAAAC | + |
Preference number: 5 (lower is better) Translates to: LIRPLNKAGVHVESGMWCTRLDK*TWRGAN Trigger: GTTTGCCCCACGCCATGTCAACTTGTCTAGTCTGGT...ACACCACATCCCACTTTCTACATGGACTCCTGCCTTATTCAGTGGTCGTATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CAA 90 bp | GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTTTGGAGTTACAGGCCTaGAGAGATTGGCACCGCCTT | + |
Preference number: 5 (lower is better) Translates to: ESTTCSWSNQFFSILATPLELQA*RDWHRL Trigger: AAGGCGGTGCCAATCTCTCAAGGCCTGTAACTCCAA...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CAA 90 bp | CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTCACAGAGTTCCAGGGTaGCAAAGACCAAAGACTTCC | + |
Preference number: 5 (lower is better) Translates to: LKPHSGAEAVSPVISWVIHRVPG*QRPKTS Trigger: GGAAGTCTTTGGTCTTTGCAACCCTGGAACTCTGTG...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 90 bp | CATGCAACTGAACGGTTTGCTGACGAGCTCCTTTGGTGTGCTTTATaGTGTTCAAAAGCTGCTCCAGTATCAGAACCCTCTGAGCTTCAT | + |
Preference number: 5 (lower is better) Translates to: HATERFADELLWCAL*CSKAAPVSEPSELH Trigger: ATGAAGCTCAGAGGGTTCTGATACTGGAGCAGCTTTTGAACAGCATAAAGCACACCAAAGGAGCTCGTCAGCAAACCGTTCAGTTGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CAA 90 bp | TTGATACGACCACTGAATAAGGCAGGAGTCCATGTAGAAAGTGGGATGTGGTGTTGGTGGGAAGGTAACTaGGAGAGTCATCTTTGCTCC | + |
Preference number: 5 (lower is better) Translates to: LIRPLNKAGVHVESGMWCWWEGN*ESHLCS Trigger: GGAGCAAAGATGACTCTCCAAGTTACCTTCCCACCA...ACACCACATCCCACTTTCTACATGGACTCCTGCCTTATTCAGTGGTCGTATCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CAA 90 bp | CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTGCTGTAGTGCCAAGGTaGTGGATCAGATTTCCAAGT | + |
Preference number: 5 (lower is better) Translates to: LKPHSGAEAVSPVISWVIAVVPR*WIRFPS Trigger: ACTTGGAAATCTGATCCACAACCTTGGCACTACAGC...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CAA 90 bp | CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTGAACTTGCGCATGAGTaGGAGGCACATTTAGCAACA | + |
Preference number: 5 (lower is better) Translates to: LKPHSGAEAVSPVISWVIELAHE*EAHLAT Trigger: TGTTGCTAAATGTGCCTCCAACTCATGCGCAAGTTC...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CAA 90 bp | CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTGGCTCCAACATTGGCTaGATACTGTTCCAGAATCAC | + |
Preference number: 5 (lower is better) Translates to: LKPHSGAEAVSPVISWVIGSNIG*ILFQNH Trigger: GTGATTCTGGAACAGTATCAAGCCAATGTTGGAGCC...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CAA 90 bp | ATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGACAGGGTCTTCGGCTTaGAAGCCTTTCCTCCTGGGC | + |
Preference number: 5 (lower is better) Translates to: IKQSPPRALGLISFSQFWTGSSA*KPFLLG Trigger: GCCCAGGAGGAAAGGCTTCAAAGCCGAAGACCCTGT...CCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTCTGTTTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 90 bp | AACACTAGGGTTAGGACGAGTCTTCTCACCTCTGGACCTAAGCTTTaGTTAGAGCCAGCCACATACTTCAGTAAGTTGGAAATGGCAGAA | + |
Preference number: 5 (lower is better) Translates to: NTRVRTSLLTSGPKL*LEPATYFSKLEMAE Trigger: TTCTGCCATTTCCAACTTACTGAAGTATGTGGCTGGCTCTAAGCAAAGCTTAGGTCCAGAGGTGAGAAGACTCGTCCTAACCCTAGTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 90 bp | CTTTTAAACACAGACGAGTACCGAGGCCCAATCTGCATGAGACTGTaGAAAGCAAAGTCGTGCAGACTTCTCGTTACTGAAGTTGCTGAT | + |
Preference number: 5 (lower is better) Translates to: LLNTDEYRGPICMRL*KAKSCRLLVTEVAD Trigger: ATCAGCAACTTCAGTAACGAGAAGTCTGCACGACTTTGCTTTGCACAGTCTCATGCAGATTGGGCCTCGGTACTCGTCTGTGTTTAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CAA 90 bp | CAGTTAGAGGACATACAGACTGTTAGAGGACATCCCTTCATTTTCAAAGCAGTGCCTGGCACATGGATGTaGGAGTTACAGGCCTTGAGA | + |
Preference number: 5 (lower is better) Translates to: QLEDIQTVRGHPFIFKAVPGTWM*ELQALR Trigger: TCTCAAGGCCTGTAACTCCAACATCCATGTGCCAGG...CACTGCTTTGAAAATGAAGGGATGTCCTCTAACAGTCTGTATGTCCTCTAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CAA 90 bp | CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGCTTGGAGAGTCATCTTaGCTCCGAATAAGATCATTA | + |
Preference number: 5 (lower is better) Translates to: LKRQNHETTASSHTVGLKLGESS*LRIRSL Trigger: TAATGATCTTATTCGGAGCAAAGATGACTCTCCAAG...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CAA 90 bp | CAGTTAGAGGACATACAGACTGTTAGAGGACATCCCTTCATTTTCAAAGCAGTGGCTTCTGGTGAAGACTaGAGTATTGCGAGCCGTTCT | + |
Preference number: 5 (lower is better) Translates to: QLEDIQTVRGHPFIFKAVASGED*SIASRS Trigger: AGAACGGCTCGCAATACTCAAGTCTTCACCAGAAGC...CACTGCTTTGAAAATGAAGGGATGTCCTCTAACAGTCTGTATGTCCTCTAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CAA 90 bp | AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTGCCTTCCAGGGTCACTaGCCAGGTAAACGAGTCTCC | + |
Preference number: 5 (lower is better) Translates to: RVFTYKHNKTESTTCSWSAFQGH*PGKRVS Trigger: GGAGACTCGTTTACCTGGCAAGTGACCCTGGAAGGC...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 90 bp | GGAACCCAAGCACACCACAGCAGCAAGTTTGGTGGGAAGGTAACTTaGAGAGTCATCTTTGCTCCGAATAAGATCATTACATTTATCGAT | + |
Preference number: 5 (lower is better) Translates to: GTQAHHSSKFGGKVT*RVIFAPNKIITFID Trigger: ATCGATAAATGTAATGATCTTATTCGGAGCAAAGATGACTCTCCAAGTTACCTTCCCACCAAACTTGCTGCTGTGGTGTGCTTGGGTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CAA 90 bp | AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTTACGAGCACTCTGCTTaGAGCCTGCTCCTGGATGCT | + |
Preference number: 5 (lower is better) Translates to: RVFTYKHNKTESTTCSWSYEHSA*SLLLDA Trigger: AGCATCCAGGAGCAGGCTCAAAGCAGAGTGCTCGTA...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CAA 90 bp | AAATGGAAACAAAATAAAACCAGAATTACCAAGAACGTTAAGTTTCGGTCCCTCGCAGCAAGCCAGAGTTaGCTTAGCGTGGCCAGGTCA | + |
Preference number: 5 (lower is better) Translates to: KWKQNKTRITKNVKFRSLAASQS*LSVARS Trigger: TGACCTGGCCACGCTAAGCAAACTCTGGCTTGCTGC...GAGGGACCGAAACTTAACGTTCTTGGTAATTCTGGTTTTATTTTGTTTCCATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CAA 90 bp | GTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATTGCACCACAGAGTCCTaGCTCTCCAGGGCAGCCTTA | + |
Preference number: 5 (lower is better) Translates to: VFTYKHNKTESTTCSWSNCTTES*LSRAAL Trigger: TAAGGCTGCCCTGGAGAGCAAGGACTCTGTGGTGCA...ATTAGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CAA 90 bp | ATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGGAGCTTTATTCCTTCTaGACAGAGCTGCAGCTCGGT | + |
Preference number: 5 (lower is better) Translates to: IKQSPPRALGLISFSQFWELYSF*TELQLG Trigger: ACCGAGCTGCAGCTCTGTCAAGAAGGAATAAAGCTC...CCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTCTGTTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CAA 90 bp | AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTCGTCCTCCCTGTTTGTaGCTAGCAAGAGCTTCTCCA | + |
Preference number: 5 (lower is better) Translates to: RVFTYKHNKTESTTCSWSRPPCL*LARASP Trigger: TGGAGAAGCTCTTGCTAGCAACAAACAGGGAGGACG...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CAA 90 bp | CAGTTAGAGGACATACAGACTGTTAGAGGACATCCCTTCATTTTCAAAGCAGTGCTGTACCCAACAGTTTaGAAACTGATATCCGCACGT | + |
Preference number: 5 (lower is better) Translates to: QLEDIQTVRGHPFIFKAVLYPTV*KLISAR Trigger: ACGTGCGGATATCAGTTTCAAAACTGTTGGGTACAG...CACTGCTTTGAAAATGAAGGGATGTCCTCTAACAGTCTGTATGTCCTCTAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CAA 90 bp | CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTACATACTTCAGTAAGTaGGAAATGGCAGAAACAACA | + |
Preference number: 5 (lower is better) Translates to: LKPHSGAEAVSPVISWVITYFSK*EMAETT Trigger: TGTTGTTTCTGCCATTTCCAACTTACTGAAGTATGT...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CAA 90 bp | CAGTTAGAGGACATACAGACTGTTAGAGGACATCCCTTCATTTTCAAAGCAGTGTTCTCGTTACTGAAGTaGCTGATCCCAGAGCATTCT | + |
Preference number: 5 (lower is better) Translates to: QLEDIQTVRGHPFIFKAVFSLLK*LIPEHS Trigger: AGAATGCTCTGGGATCAGCAACTTCAGTAACGAGAA...CACTGCTTTGAAAATGAAGGGATGTCCTCTAACAGTCTGTATGTCCTCTAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CAA 90 bp | AAATGGAAACAAAATAAAACCAGAATTACCAAGAACGTTAAGTTTCGGTCCCTCCTGAAAGGGTGTGGCTaGTCATCCCCTCTGGTCAAA | + |
Preference number: 5 (lower is better) Translates to: KWKQNKTRITKNVKFRSLLKGCG*SSPLVK Trigger: TTTGACCAGAGGGGATGACAAGCCACACCCTTTCAG...GAGGGACCGAAACTTAACGTTCTTGGTAATTCTGGTTTTATTTTGTTTCCATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CAA 90 bp | TTGATACGACCACTGAATAAGGCAGGAGTCCATGTAGAAAGTGGGATGTGGTGTAGTAGTCTTCAAGGCTaGCTTGTGATTTTTATGTCT | + |
Preference number: 5 (lower is better) Translates to: LIRPLNKAGVHVESGMWCSSLQG*LVIFMS Trigger: AGACATAAAAATCACAAGCAAGCCTTGAAGACTACT...ACACCACATCCCACTTTCTACATGGACTCCTGCCTTATTCAGTGGTCGTATCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CAA 90 bp | GTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATAGTTCAAGAAGACACTaGGCAGCAGCACATCGGACA | + |
Preference number: 5 (lower is better) Translates to: VFTYKHNKTESTTCSWSNSSRRH*AAAHRT Trigger: TGTCCGATGTGCTGCTGCCAAGTGTCTTCTTGAACT...ATTAGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CAA 90 bp | AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTTTCCTTCACATGTTCTaGGGCGGCACAGATAATCTG | + |
Preference number: 5 (lower is better) Translates to: RVFTYKHNKTESTTCSWSFLHMF*GGTDNL Trigger: CAGATTATCTGTGCCGCCCAAGAACATGTGAAGGAA...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CAA 90 bp | GTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATACAACCCCAAAGAGCTaGGATGCAGAGCTAATCACA | + |
Preference number: 5 (lower is better) Translates to: VFTYKHNKTESTTCSWSNTTPKS*DAELIT Trigger: TGTGATTAGCTCTGCATCCAAGCTCTTTGGGGTTGT...ATTAGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CAA 90 bp | GTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATAGGAAACGGCCGGCTTaGGATACTGAAAAATGGAGT | + |
Preference number: 5 (lower is better) Translates to: VFTYKHNKTESTTCSWSNRKRPA*DTEKWS Trigger: ACTCCATTTTTCAGTATCCAAAGCCGGCCGTTTCCT...ATTAGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CAA 90 bp | AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTATTCTACCCAATTTCTaGTACAAGGAACCCAAGCAC | + |
Preference number: 5 (lower is better) Translates to: RVFTYKHNKTESTTCSWSILPNF*YKEPKH Trigger: GTGCTTGGGTTCCTTGTACAAGAAATTGGGTAGAAT...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS-3UTR CAA 90 bp | AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTAAGCTCCTCCTAATGTaGAAACAAATACCACGTAAG | + |
Preference number: 5 (lower is better) Translates to: RVFTYKHNKTESTTCSWSKLLLM*KQIPRK Trigger: CTTACGTGGTATTTGTTTCAACATTAGGAGGAGCTT...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 72 bp | GGACCGGGCAGCCTTGTAAACGTCCCTGTGGCACGGTaGAGCGGCAGCACCCAGCCCAGTCAGTATACTCTG | + |
Preference number: 6 (lower is better) Translates to: GPGSLVNVPVAR*SGSTQPSQYTL Trigger: CAGAGTATACTGACTGGGCTGGGTGCTGCCGCTGCACCGTGCCACAGGGACGTTTACAAGGCTGCCCGGTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 72 bp | CGCCCCTTCAAGGCCCACTTCTCTGAGGTTAGCATCTaGAGCGGCGTCCCTGCCATCCCTGGCCAGCATGAT | + |
Preference number: 6 (lower is better) Translates to: RPFKAHFSEVSI*SGVPAIPGQHD Trigger: ATCATGCTGGCCAGGGATGGCAGGGACGCCGCTGCAGATGCTAACCTCAGAGAAGTGGGCCTTGAAGGGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040583.7 ENSMUST00000217966.2 |
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CDS CCA 72 bp | CAAAGGGCTGGCAGTAAGCACGTCGATGCTGCTGCTTaGGTATCAGGGGCCGTCAGCTCGGCAGCCAGCTCT | + |
Preference number: 6 (lower is better) Translates to: QRAGSKHVDAAA*VSGAVSSAASS Trigger: AGAGCTGGCTGCCGAGCTGACGGCCCCTGATACCCAAGCAGCAGCATCGACGTGCTTACTGCCAGCCCTTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 72 bp | AAGGCAAGAGATGGCCTGAGCCTGGACCAGGCAGCCTaGGTGATCCTGCATCACTGCACAGCCCAGCAGACA | + |
Preference number: 6 (lower is better) Translates to: KARDGLSLDQAA*VILHHCTAQQT Trigger: TGTCTGCTGGGCTGTGCAGTGATGCAGGATCACCCAGGCTGCCTGGTCCAGGCTCAGGCCATCTCTTGCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040583.7 ENSMUST00000217966.2 |
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CDS TCA 72 bp | AAGGAGATGAGGATGGGCAGAAGGCAGGCCACCAGCTaGGCGCGGTGCTCTTCTTCCGCAATGGCGACCAAA | + |
Preference number: 6 (lower is better) Translates to: KEMRMGRRQATS*ARCSSSAMATK Trigger: TTTGGTCGCCATTGCGGAAGAAGAGCACCGCGCTCAGCTGGTGGCCTGCCTTCTGCCCATCCTCATCTCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 72 bp | CGGCAAGGCCACCGCAATGCAGTGCAAGCACCAGGCTaGAGCCAGTCGAACAGAAATGCTAGGGTGCAGAAC | + |
Preference number: 6 (lower is better) Translates to: RQGHRNAVQAPG*SQSNRNARVQN Trigger: GTTCTGCACCCTAGCATTTCTGTTCGACTGGCTGCAGCCTGGTGCTTGCACTGCATTGCGGTGGCCTTGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 72 bp | CCACCTGGGCCAAGGAACATCGAGCAGGGCCTGCAGTaGACGCAGACAAGCCATGATGCTTTCCAAGCTTGC | + |
Preference number: 6 (lower is better) Translates to: PPGPRNIEQGLQ*TQTSHDAFQAC Trigger: GCAAGCTTGGAAAGCATCATGGCTTGTCTGCGTGCACTGCAGGCCCTGCTCGATGTTCCTTGGCCCAGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 72 bp | AGAGTCTGCAGGGAAGCCGTGACTGTGCAGGATAACTaGCCCCCAGGTAACTTCACAGCCGTTTCCCGGAGG | + |
Preference number: 6 (lower is better) Translates to: RVCREAVTVQDN*PPGNFTAVSRR Trigger: CCTCCGGGAAACGGCTGTGAAGTTACCTGGGGGCCAGTTATCCTGCACAGTCACGGCTTCCCTGCAGACTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CAA 90 bp | GATGAGCCCTGGCACATGGATGTTGGAGTTACAGGCCTTGAGAGATaGGCACCGCCTTCATCTGGGTCAGCGAAGCCCGTGCTGGTGAGC | + |
Preference number: 6 (lower is better) Translates to: DEPWHMDVGVTGLER*APPSSGSAKPVLVS Trigger: GCTCACCAGCACGGGCTTCGCTGACCCAGATGAAGGCGGTGCCAATCTCTCAAGGCCTGTAACTCCAACATCCATGTGCCAGGGCTCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS TCA 72 bp | CCAGCACATGCTGGCTGGCGGCTACATCCGTGGAACTaGGACGGGTCTCCACATTACCATCACTCAATGCGG | + |
Preference number: 6 (lower is better) Translates to: PAHAGWRLHPWN*DGSPHYHHSMR Trigger: CCGCATTGAGTGATGGTAATGTGGAGACCCGTCTCAGTTCCACGGATGTAGCCGCCAGCCAGCATGTGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS TCA 72 bp | CATCTGCAGCGGCGTCCCTGCCATCCCTGGCCAGCATaGTGGCATGCTCTGAAACTTCAGCTGCTTCTCTCT | + |
Preference number: 6 (lower is better) Translates to: HLQRRPCHPWPA*WHALKLQLLLS Trigger: AGAGAGAAGCAGCTGAAGTTTCAGAGCATGCCATCATGCTGGCCAGGGATGGCAGGGACGCCGCTGCAGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040583.7 ENSMUST00000217966.2 |
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CDS TCA 72 bp | CATCGAGCAGGGCCTGCAGTGCACGCAGACAAGCCATaGTGCTTTCCAAGCTTGCATCTGAGCGCAGGGAAC | + |
Preference number: 6 (lower is better) Translates to: HRAGPAVHADKP*CFPSLHLSAGN Trigger: GTTCCCTGCGCTCAGATGCAAGCTTGGAAAGCATCATGGCTTGTCTGCGTGCACTGCAGGCCCTGCTCGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 72 bp | CACCAGGCTGCAGCCAGTCGAACAGAAATGCTAGGGTaGAGAACCACCGAGATGACGCTGTCCAGAAGGCCT | + |
Preference number: 6 (lower is better) Translates to: HQAAASRTEMLG*RTTEMTLSRRP Trigger: AGGCCTTCTGGACAGCGTCATCTCGGTGGTTCTGCACCCTAGCATTTCTGTTCGACTGGCTGCAGCCTGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 72 bp | GCACAGAGAGCACCGGCTCGGCCTTCCAGGGTCACTTaGCAGGTAAACGAGTCTCCTCGGCTCTTTTCTGTT | + |
Preference number: 6 (lower is better) Translates to: AQRAPARPSRVT*QVNESPRLFSV Trigger: AACAGAAAAGAGCCGAGGAGACTCGTTTACCTGGCAAGTGACCCTGGAAGGCCGAGCCGGTGCTCTCTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 72 bp | GAGATGACGCTGTCCAGAAGGCCTGTGCTGGAATCCTaGAGCAAAGGCGCAGCTGTAGTGCCAAGGTTGTGG | + |
Preference number: 6 (lower is better) Translates to: EMTLSRRPVLES*SKGAAVVPRLW Trigger: CCACAACCTTGGCACTACAGCTGCGCCTTTGCTCCAGGATTCCAGCACAGGCCTTCTGGACAGCGTCATCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 72 bp | GGCACATGGATGTTGGAGTTACAGGCCTTGAGAGATTaGCACCGCCTTCATCTGGGTCAGCGAAGCCCGTGC | + |
Preference number: 6 (lower is better) Translates to: GTWMLELQALRD*HRLHLGQRSPC Trigger: GCACGGGCTTCGCTGACCCAGATGAAGGCGGTGCCAATCTCTCAAGGCCTGTAACTCCAACATCCATGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CAA 72 bp | AGCACAGAGAGCACCGGCTCGGCCTTCCAGGGTCACTaGCCAGGTAAACGAGTCTCCTCGGCTCTTTTCTGT | + |
Preference number: 6 (lower is better) Translates to: STESTGSAFQGH*PGKRVSSALFC Trigger: ACAGAAAAGAGCCGAGGAGACTCGTTTACCTGGCAAGTGACCCTGGAAGGCCGAGCCGGTGCTCTCTGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CAA 90 bp | GCACAGCCCAGCAGACAGGACGTCCTTAAGGCGGACACGGAAGTATaGCTACCTTGTAGCTCTGGGCCTAACGTGGTAATGAGGGCGTTC | + |
Preference number: 6 (lower is better) Translates to: AQPSRQDVLKADTEV*LPCSSGPNVVMRAF Trigger: GAACGCCCTCATTACCACGTTAGGCCCAGAGCTACAAGGTAGCAATACTTCCGTGTCCGCCTTAAGGACGTCCTGTCTGCTGGGCTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040583.7 ENSMUST00000217966.2 |
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CDS CAA 90 bp | CTGATGATGATGAGCCCTGGCACATGGATGTTGGAGTTACAGGCCTaGAGAGATTGGCACCGCCTTCATCTGGGTCAGCGAAGCCCGTGC | + |
Preference number: 6 (lower is better) Translates to: LMMMSPGTWMLELQA*RDWHRLHLGQRSPC Trigger: GCACGGGCTTCGCTGACCCAGATGAAGGCGGTGCCAATCTCTCAAGGCCTGTAACTCCAACATCCATGTGCCAGGGCTCATCATCATCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS TCA 72 bp | TCTCTCCAAGCAGGCCTCCTAGAGTCGCTCGAAGAATaGATGAGACACAGCGGCGACAGCAGACGGCGTCAA | + |
Preference number: 6 (lower is better) Translates to: SLQAGLLESLEE*MRHSGDSRRRQ Trigger: TTGACGCCGTCTGCTGTCGCCGCTGTGTCTCATTCATTCTTCGAGCGACTCTAGGAGGCCTGCTTGGAGAGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS TCA 72 bp | AGCAACCAACAGCCATCCCGCTTGTGTGCGCTGAAGTaGCAGGCGGCTGTTTTGAGCAGCGGAACACAGCAA | + |
Preference number: 6 (lower is better) Translates to: SNQQPSRLCALK*QAAVLSSGTQQ Trigger: TTGCTGTGTTCCGCTGCTCAAAACAGCCGCCTGTCACTTCAGCGCACACAAGCGGGATGGCTGTTGGTTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS TCA 72 bp | CACGTGATAGAGTGCACCCGCAGAATCAATGGTCAGTaGCAAGGAGTGGAGTGCCCAGGTCTGCACGTCAGG | + |
Preference number: 6 (lower is better) Translates to: HVIECTRRINGQ*QGVECPGLHVR Trigger: CCTGACGTGCAGACCTGGGCACTCCACTCCTTGTCACTGACCATTGATTCTGCGGGTGCACTCTATCACGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040583.7 ENSMUST00000217966.2 |
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CDS TCA 72 bp | CAGTCTACTTCCCTCCTCCAACAGGGTCTTCGGCTTTaGAGCCTTTCCTCCTGGGCTACCTGCCAGCTTAGG | + |
Preference number: 6 (lower is better) Translates to: QSTSLLQQGLRL*SLSSWATCQLR Trigger: CCTAAGCTGGCAGGTAGCCCAGGAGGAAAGGCTTCAAAGCCGAAGACCCTGTTGGAGGAGGGAAGTAGACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 72 bp | ATTCTCCACCTGGGCCAAGGAACATCGAGCAGGGCCTaGAGTGCACGCAGACAAGCCATGATGCTTTCCAAG | + |
Preference number: 6 (lower is better) Translates to: ILHLGQGTSSRA*SARRQAMMLSK Trigger: CTTGGAAAGCATCATGGCTTGTCTGCGTGCACTGCAGGCCCTGCTCGATGTTCCTTGGCCCAGGTGGAGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 72 bp | CGGGCCATGGGGGAAGTTAAGATTCCTTTCAGAGTCTaGAGGGAAGCCGTGACTGTGCAGGATAACTGGCCC | + |
Preference number: 6 (lower is better) Translates to: RAMGEVKIPFRV*REAVTVQDNWP Trigger: GGGCCAGTTATCCTGCACAGTCACGGCTTCCCTGCAGACTCTGAAAGGAATCTTAACTTCCCCCATGGCCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 72 bp | AGTGCACCCGCAGAATCAATGGTCAGTGACAAGGAGTaGAGTGCCCAGGTCTGCACGTCAGGAGAAGTGCTG | + |
Preference number: 6 (lower is better) Translates to: SAPAESMVSDKE*SAQVCTSGEVL Trigger: CAGCACTTCTCCTGACGTGCAGACCTGGGCACTCCACTCCTTGTCACTGACCATTGATTCTGCGGGTGCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040583.7 ENSMUST00000217966.2 |
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CDS CCA 72 bp | GCTAATGCACTTTGGAGGAGGCTGGTCCAAGCTTCGTaGCTCTTTTCTGCCCGGGCCATGGGGGAAGTTAAG | + |
Preference number: 6 (lower is better) Translates to: ANALWRRLVQAS*LFSARAMGEVK Trigger: CTTAACTTCCCCCATGGCCCGGGCAGAAAAGAGCCACGAAGCTTGGACCAGCCTCCTCCAAAGTGCATTAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CAA 72 bp | TGGCACATGGATGTTGGAGTTACAGGCCTTGAGAGATaGGCACCGCCTTCATCTGGGTCAGCGAAGCCCGTG | + |
Preference number: 6 (lower is better) Translates to: WHMDVGVTGLER*APPSSGSAKPV Trigger: CACGGGCTTCGCTGACCCAGATGAAGGCGGTGCCAATCTCTCAAGGCCTGTAACTCCAACATCCATGTGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS TCA 72 bp | GCATGCTTAGAAGGCGGATCCACTCGGACACTTTCCTaGTTGCCTTTTACAGCAGCCTCCAGCCGGGCTTTC | + |
Preference number: 6 (lower is better) Translates to: ACLEGGSTRTLS*LPFTAASSRAF Trigger: GAAAGCCCGGCTGGAGGCTGCTGTAAAAGGCAATCAGGAAAGTGTCCGAGTGGATCCGCCTTCTAAGCATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 72 bp | AGGAGTGGAGTGCCCAGGTCTGCACGTCAGGAGAAGTaGTGTCCTGAGACAGGGTATAAAGGACTCCAATGC | + |
Preference number: 6 (lower is better) Translates to: RSGVPRSARQEK*CPETGYKGLQC Trigger: GCATTGGAGTCCTTTATACCCTGTCTCAGGACAGCACTTCTCCTGACGTGCAGACCTGGGCACTCCACTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040583.7 ENSMUST00000217966.2 |
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CDS GCA 72 bp | GGGCCCAGGAGTCGTGGTAGTGTAGCTTTGCACTCTTaGTCGTCTCTGCTGTGTAGAAAGCACCACCTTCAG | + |
Preference number: 6 (lower is better) Translates to: GPRSRGSVALHS*SSLLCRKHHLQ Trigger: CTGAAGGTGGTGCTTTCTACACAGCAGAGACGAGCAAGAGTGCAAAGCTACACTACCACGACTCCTGGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 72 bp | CAAGAAGACACTTGGCAGCAGCACATCGGACAGCCATaGATCTGTCTGTTAAGCAGGACCGGGCAGCCTTGT | + |
Preference number: 6 (lower is better) Translates to: QEDTWQQHIGQP*ICLLSRTGQPC Trigger: ACAAGGCTGCCCGGTCCTGCTTAACAGACAGATCCATGGCTGTCCGATGTGCTGCTGCCAAGTGTCTTCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 72 bp | ACTACCAAGAGTGTGTCAAGGCCAGAGAGACGGAGCTaGTCACTGTGGTCTGTGGCAGCCATGAAAGCCATG | + |
Preference number: 6 (lower is better) Translates to: TTKSVSRPERRS*SLWSVAAMKAM Trigger: CATGGCTTTCATGGCTGCCACAGACCACAGTGACCAGCTCCGTCTCTCTGGCCTTGACACACTCTTGGTAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 72 bp | GGGGACTTCACGGCAGCTCCTGATGATGATGAGCCCTaGCACATGGATGTTGGAGTTACAGGCCTTGAGAGA | + |
Preference number: 6 (lower is better) Translates to: GDFTAAPDDDEP*HMDVGVTGLER Trigger: TCTCTCAAGGCCTGTAACTCCAACATCCATGTGCCAGGGCTCATCATCATCAGGAGCTGCCGTGAAGTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 72 bp | TGGTCCAAGCTTCGTGGCTCTTTTCTGCCCGGGCCATaGGGGAAGTTAAGATTCCTTTCAGAGTCTGCAGGG | + |
Preference number: 6 (lower is better) Translates to: WSKLRGSFLPGP*GKLRFLSESAG Trigger: CCCTGCAGACTCTGAAAGGAATCTTAACTTCCCCCATGGCCCGGGCAGAAAAGAGCCACGAAGCTTGGACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 72 bp | AGTCAAGCACAGTTGCTAATGCACTTTGGAGGAGGCTaGTCCAAGCTTCGTGGCTCTTTTCTGCCCGGGCCA | + |
Preference number: 6 (lower is better) Translates to: SQAQLLMHFGGG*SKLRGSFLPGP Trigger: TGGCCCGGGCAGAAAAGAGCCACGAAGCTTGGACCAGCCTCCTCCAAAGTGCATTAGCAACTGTGCTTGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CAA 72 bp | ATGAGCCCTGGCACATGGATGTTGGAGTTACAGGCCTaGAGAGATTGGCACCGCCTTCATCTGGGTCAGCGA | + |
Preference number: 6 (lower is better) Translates to: MSPGTWMLELQA*RDWHRLHLGQR Trigger: TCGCTGACCCAGATGAAGGCGGTGCCAATCTCTCAAGGCCTGTAACTCCAACATCCATGTGCCAGGGCTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CAA 72 bp | GTGCTCCGTCAACTGGGCTCCAGCAGTCAAGCACAGTaGCTAATGCACTTTGGAGGAGGCTGGTCCAAGCTT | + |
Preference number: 6 (lower is better) Translates to: VLRQLGSSSQAQ*LMHFGGGWSKL Trigger: AAGCTTGGACCAGCCTCCTCCAAAGTGCATTAGCAACTGTGCTTGACTGCTGGAGCCCAGTTGACGGAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CAA 90 bp | GCAAAGACTCTAGTGGCCCATCGAGGATTACTGAAAGGGTGTGGCTaGTCATCCCCTCTGGTCAAAACCGAGGCATCGTCACCTCTGTCG | + |
Preference number: 6 (lower is better) Translates to: AKTLVAHRGLLKGCG*SSPLVKTEASSPLS Trigger: CGACAGAGGTGACGATGCCTCGGTTTTGACCAGAGGGGATGACAAGCCACACCCTTTCAGTAATCCTCGATGGGCCACTAGAGTCTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CAA 90 bp | ACTTCACGGCAGCTCCTGATGATGATGAGCCCTGGCACATGGATGTaGGAGTTACAGGCCTTGAGAGATTGGCACCGCCTTCATCTGGGT | + |
Preference number: 6 (lower is better) Translates to: TSRQLLMMMSPGTWM*ELQALRDWHRLHLG Trigger: ACCCAGATGAAGGCGGTGCCAATCTCTCAAGGCCTGTAACTCCAACATCCATGTGCCAGGGCTCATCATCATCAGGAGCTGCCGTGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS TCA 72 bp | TCCTTTCAGCATATCTCCACTGGCTCGAAGGAATCCTaGACTCCCACGCAGAAACCCTGCTCCCAGCAGTTC | + |
Preference number: 6 (lower is better) Translates to: SFQHISTGSKES*TPTQKPCSQQF Trigger: GAACTGCTGGGAGCAGGGTTTCTGCGTGGGAGTTCAGGATTCCTTCGAGCCAGTGGAGATATGCTGAAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS TCA 72 bp | ACGCAGACAAGCCATGATGCTTTCCAAGCTTGCATCTaGGCGCAGGGAACACAGGAACTCCACGCTGATTCC | + |
Preference number: 6 (lower is better) Translates to: TQTSHDAFQACI*AQGTQELHADS Trigger: GGAATCAGCGTGGAGTTCCTGTGTTCCCTGCGCTCAGATGCAAGCTTGGAAAGCATCATGGCTTGTCTGCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 72 bp | TTCAGCAAGGACAGGAGCTGCCCAACAAGAGTCTTCTaGTTCTCCCTGACGTCCTCCCTGTTTGTTGCTAGC | + |
Preference number: 6 (lower is better) Translates to: FSKDRSCPTRVF*FSLTSSLFVAS Trigger: GCTAGCAACAAACAGGGAGGACGTCAGGGAGAAGCAGAAGACTCTTGTTGGGCAGCTCCTGTCCTTGCTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 72 bp | GCGGCATCCATAACTTTCTTTAGCCTCCAGACTGCCTaGCAGATCTCCTTTGCAGCAGCTATCTGCGCCTTC | + |
Preference number: 6 (lower is better) Translates to: AASITFFSLQTA*QISFAAAICAF Trigger: GAAGGCGCAGATAGCTGCTGCAAAGGAGATCTGCCAGGCAGTCTGGAGGCTAAAGAAAGTTATGGATGCCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 72 bp | GCTAACCCAGCAGTAAAGGCTCCATCATCAGCCACTTaGGCTAACCTAGCCCATGCTTCCGAAGCTGCACAT | + |
Preference number: 6 (lower is better) Translates to: ANPAVKAPSSAT*ANLAHASEAAH Trigger: ATGTGCAGCTTCGGAAGCATGGGCTAGGTTAGCCCAAGTGGCTGATGATGGAGCCTTTACTGCTGGGTTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 72 bp | CCTAAGTACCTATGCAGGGATCCCAGAGCCAGTGAGTaGCCTGTTCTGGTAACCACATCTCTCGCTGACTTC | + |
Preference number: 6 (lower is better) Translates to: PKYLCRDPRASE*PVLVTTSLADF Trigger: GAAGTCAGCGAGAGATGTGGTTACCAGAACAGGCCACTCACTGGCTCTGGGATCCCTGCATAGGTACTTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 72 bp | GGGCTCCAGCAGTCAAGCACAGTTGCTAATGCACTTTaGAGGAGGCTGGTCCAAGCTTCGTGGCTCTTTTCT | + |
Preference number: 6 (lower is better) Translates to: GLQQSSTVANAL*RRLVQASWLFS Trigger: AGAAAAGAGCCACGAAGCTTGGACCAGCCTCCTCCAAAGTGCATTAGCAACTGTGCTTGACTGCTGGAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 72 bp | GCCTTTTACAGCAGCCTCCAGCCGGGCTTTCAGGGCTaGGGAAGAAGCCATGACTCTTTTAAACACAGACGA | + |
Preference number: 6 (lower is better) Translates to: AFYSSLQPGFQG*GRSHDSFKHRR Trigger: TCGTCTGTGTTTAAAAGAGTCATGGCTTCTTCCCCAGCCCTGAAAGCCCGGCTGGAGGCTGCTGTAAAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CAA 72 bp | TCAGTAAGGAGATCACCACAGTGCGAAATGAAACTCTaGACAGCACAGAGAGCACCGGCTCGGCCTTCCAGG | + |
Preference number: 6 (lower is better) Translates to: SVRRSPQCEMKL*TAQRAPARPSR Trigger: CCTGGAAGGCCGAGCCGGTGCTCTCTGTGCTGTCAAGAGTTTCATTTCGCACTGTGGTGATCTCCTTACTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CAA 72 bp | CTAGTGGCCCATCGAGGATTACTGAAAGGGTGTGGCTaGTCATCCCCTCTGGTCAAAACCGAGGCATCGTCA | + |
Preference number: 6 (lower is better) Translates to: LVAHRGLLKGCG*SSPLVKTEASS Trigger: TGACGATGCCTCGGTTTTGACCAGAGGGGATGACAAGCCACACCCTTTCAGTAATCCTCGATGGGCCACTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CAA 72 bp | CAGCTCCTGATGATGATGAGCCCTGGCACATGGATGTaGGAGTTACAGGCCTTGAGAGATTGGCACCGCCTT | + |
Preference number: 6 (lower is better) Translates to: QLLMMMSPGTWM*ELQALRDWHRL Trigger: AAGGCGGTGCCAATCTCTCAAGGCCTGTAACTCCAACATCCATGTGCCAGGGCTCATCATCATCAGGAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CAA 72 bp | TGTGACGGCAGTAAGCAGACTGACTTCATCAGGTTCTaGTGCTCCGTCAACTGGGCTCCAGCAGTCAAGCAC | + |
Preference number: 6 (lower is better) Translates to: CDGSKQTDFIRF*CSVNWAPAVKH Trigger: GTGCTTGACTGCTGGAGCCCAGTTGACGGAGCACAAGAACCTGATGAAGTCAGTCTGCTTACTGCCGTCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CAA 72 bp | GTCTTTAGCTGGATGCTGGAGTTCCTGGCCAGGTTCTaGGCATGCTTAGAAGGCGGATCCACTCGGACACTT | + |
Preference number: 6 (lower is better) Translates to: VFSWMLEFLARF*ACLEGGSTRTL Trigger: AAGTGTCCGAGTGGATCCGCCTTCTAAGCATGCCAAGAACCTGGCCAGGAACTCCAGCATCCAGCTAAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 72 bp | TCTGCGGAGATCGCTGAGGTCACTAACAACCCCACTTaGTATCCAAGCACTGCAAACCTGACATGCTTTGGC | + |
Preference number: 6 (lower is better) Translates to: SAEIAEVTNNPT*YPSTANLTCFG Trigger: GCCAAAGCATGTCAGGTTTGCAGTGCTTGGATAGCAAGTGGGGTTGTTAGTGACCTCAGCGATCTCCGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 72 bp | TTTCCAAGTTCTTGTAAAGCACAAACCAGCACATGCTaGCTGGCGGCTACATCCGTGGAACTGAGACGGGTC | + |
Preference number: 6 (lower is better) Translates to: FPSSCKAQTSTC*LAATSVELRRV Trigger: GACCCGTCTCAGTTCCACGGATGTAGCCGCCAGCCAGCATGTGCTGGTTTGTGCTTTACAAGAACTTGGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 72 bp | AAAGAGCTTGGATGCAGAGCTAATCACAGACAGTGCTaGAGGCAGGGGCTTAGGCACAGAGTCTCCTTCTAC | + |
Preference number: 6 (lower is better) Translates to: KELGCRANHRQC*RQGLRHRVSFY Trigger: GTAGAAGGAGACTCTGTGCCTAAGCCCCTGCCTCCAGCACTGTCTGTGATTAGCTCTGCATCCAAGCTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 72 bp | TACGAGTCCTCCTGTGTCCTTCCCTTCACCAAACTCTaGCAGGGTTTCCTTCTCAGAGGCTCCATCATCAAC | + |
Preference number: 6 (lower is better) Translates to: YESSCVLPFTKL*QGFLLRGSIIN Trigger: GTTGATGATGGAGCCTCTGAGAAGGAAACCCTGCCAGAGTTTGGTGAAGGGAAGGACACAGGAGGACTCGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CAA 72 bp | AGCAGACAGGACGTCCTTAAGGCGGACACGGAAGTATaGCTACCTTGTAGCTCTGGGCCTAACGTGGTAATG | + |
Preference number: 6 (lower is better) Translates to: SRQDVLKADTEV*LPCSSGPNVVM Trigger: CATTACCACGTTAGGCCCAGAGCTACAAGGTAGCAATACTTCCGTGTCCGCCTTAAGGACGTCCTGTCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040583.7 ENSMUST00000217966.2 |
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CDS CAA 72 bp | CTGAAAAATGGAGTGGAGGAGCTGACAGGTCTTCATTaGCACCACAGAGTCCTTGCTCTCCAGGGCAGCCTT | + |
Preference number: 6 (lower is better) Translates to: LKNGVEELTGLH*HHRVLALQGSL Trigger: AAGGCTGCCCTGGAGAGCAAGGACTCTGTGGTGCAAATGAAGACCTGTCAGCTCCTCCACTCCATTTTTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS TCA 72 bp | AGCCTGAGTAACTCCGACTCGAACGTCTCTGCTGACTaGACTGTTTCCTTTCAGCATATCTCCACTGGCTCG | + |
Preference number: 6 (lower is better) Translates to: SLSNSDSNVSAD*TVSFQHISTGS Trigger: CGAGCCAGTGGAGATATGCTGAAAGGAAACAGTTCAGTCAGCAGAGACGTTCGAGTCGGAGTTACTCAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS TCA 72 bp | TCCAGGGCAGCCTTAAATTTTTCAATGCAGCGATTCTaGAGGCAGGGGACGGTTGTCACTTCTGGGCTGGTA | + |
Preference number: 6 (lower is better) Translates to: SRAALNFSMQRF*RQGTVVTSGLV Trigger: TACCAGCCCAGAAGTGACAACCGTCCCCTGCCTTCAGAATCGCTGCATTGAAAAATTTAAGGCTGCCCTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 72 bp | ACTCTACGAGCACTCTGCTTTGAGCCTGCTCCTGGATaGTTAGCAGTTACAGCTTTAGCCAACACTGTACCC | + |
Preference number: 6 (lower is better) Translates to: TLRALCFEPAPG*LAVTALANTVP Trigger: GGGTACAGTGTTGGCTAAAGCTGTAACTGCTAAGCATCCAGGAGCAGGCTCAAAGCAGAGTGCTCGTAGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 72 bp | TCCAGAACTTCCTCCAGTGACACTCTACGAGCACTCTaGTTTGAGCCTGCTCCTGGATGCTTAGCAGTTACA | + |
Preference number: 6 (lower is better) Translates to: SRTSSSDTLRAL*FEPAPGCLAVT Trigger: TGTAACTGCTAAGCATCCAGGAGCAGGCTCAAAGCAGAGTGCTCGTAGAGTGTCACTGGAGGAAGTTCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 72 bp | AATGAGACACAGCGGCGACAGCAGACGGCGTCAATCTaGGTCTGTGTGGCTTTAGGATTTGACTGTGATACA | + |
Preference number: 6 (lower is better) Translates to: NETQRRQQTASI*VCVALGFDCDT Trigger: TGTATCACAGTCAAATCCTAAAGCCACACAGACGCAGATTGACGCCGTCTGCTGTCGCCGCTGTGTCTCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 72 bp | AGATTTCCAAGTTCTTGTAAAGCACAAACCAGCACATaGTGGCTGGCGGCTACATCCGTGGAACTGAGACGG | + |
Preference number: 6 (lower is better) Translates to: RFPSSCKAQTST*WLAATSVELRR Trigger: CCGTCTCAGTTCCACGGATGTAGCCGCCAGCCAGCATGTGCTGGTTTGTGCTTTACAAGAACTTGGAAATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 72 bp | CGCTGGATGACTTCCTCAGTAAGGAGATCACCACAGTaGGAAATGAAACTCTTGACAGCACAGAGAGCACCG | + |
Preference number: 6 (lower is better) Translates to: RWMTSSVRRSPQ*EMKLLTAQRAP Trigger: CGGTGCTCTCTGTGCTGTCAAGAGTTTCATTTCGCACTGTGGTGATCTCCTTACTGAGGAAGTCATCCAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 72 bp | AAGTGCTGTCCTGAGACAGGGTATAAAGGACTCCAATaGAAGAACTCAAGTGCTGAGGCCCTATGCCCCCTA | + |
Preference number: 6 (lower is better) Translates to: KCCPETGYKGLQ*KNSSAEALCPL Trigger: TAGGGGGCATAGGGCCTCAGCACTTGAGTTCTTGCATTGGAGTCCTTTATACCCTGTCTCAGGACAGCACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040583.7 ENSMUST00000217966.2 |
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CDS GCA 72 bp | ACCGAGGCATCGTCACCTCTGTCGCCTTCTTCCTCCTaGATTGTATCCACGCAAGTTACAGCTGTAAAGTCA | + |
Preference number: 6 (lower is better) Translates to: TEASSPLSPSSS*IVSTQVTAVKS Trigger: TGACTTTACAGCTGTAACTTGCGTGGATACAATGCAGGAGGAAGAAGGCGACAGAGGTGACGATGCCTCGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 72 bp | TCCACGTCTGTGCTCCACATAAAGATGGCCTCATTCTaGAGTTCAAGAAGACACTTGGCAGCAGCACATCGG | + |
Preference number: 6 (lower is better) Translates to: STSVLHIKMASF*SSRRHLAAAHR Trigger: CCGATGTGCTGCTGCCAAGTGTCTTCTTGAACTCCAGAATGAGGCCATCTTTATGTGGAGCACAGACGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 72 bp | AATCCTGAAGTGCAGCAAGCCAGAGTTTGCTTAGCGTaGCCAGGTCAGTGCAGACTAAGTCAAGAAGACCAG | + |
Preference number: 6 (lower is better) Translates to: NPEVQQARVCLA*PGQCRLSQEDQ Trigger: CTGGTCTTCTTGACTTAGTCTGCACTGACCTGGCCACGCTAAGCAAACTCTGGCTTGCTGCACTTCAGGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 72 bp | GCAGCGATTCTGAAGGCAGGGGACGGTTGTCACTTCTaGGCTGGTAGACAAAATAAATACTGTGACGGCAGT | + |
Preference number: 6 (lower is better) Translates to: AAILKAGDGCHF*AGRQNKYCDGS Trigger: ACTGCCGTCACAGTATTTATTTTGTCTACCAGCCCAGAAGTGACAACCGTCCCCTGCCTTCAGAATCGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CAA 90 bp | CCTGTGCTGGAATCCTGGAGCAAAGGCGCAGCTGTAGTGCCAAGGTaGTGGATCAGATTTCCAAGTTCTTGTAAAGCACAAACCAGCACA | + |
Preference number: 6 (lower is better) Translates to: PVLESWSKGAAVVPR*WIRFPSSCKAQTST Trigger: TGTGCTGGTTTGTGCTTTACAAGAACTTGGAAATCTGATCCACAACCTTGGCACTACAGCTGCGCCTTTGCTCCAGGATTCCAGCACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS TCA 72 bp | AGGGTGAGCTTCCCTACTGCCATGGACGTCAGCATATaGTGCAATGTCTCTCTGATATCCTGGCACAAGCTT | + |
Preference number: 6 (lower is better) Translates to: RVSFPTAMDVSI*CNVSLISWHKL Trigger: AAGCTTGTGCCAGGATATCAGAGAGACATTGCATCATATGCTGACGTCCATGGCAGTAGGGAAGCTCACCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS TCA 72 bp | TTGCATCTGAGCGCAGGGAACACAGGAACTCCACGCTaGTTCCTAGAATCAGATGGAACCTGTCAGTGTAGA | + |
Preference number: 6 (lower is better) Translates to: LHLSAGNTGTPR*FLESDGTCQCR Trigger: TCTACACTGACAGGTTCCATCTGATTCTAGGAATCAGCGTGGAGTTCCTGTGTTCCCTGCGCTCAGATGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS TCA 72 bp | AAGTTAAGATTCCTTTCAGAGTCTGCAGGGAAGCCGTaGCTGTGCAGGATAACTGGCCCCCAGGTAACTTCA | + |
Preference number: 6 (lower is better) Translates to: KLRFLSESAGKP*LCRITGPQVTS Trigger: TGAAGTTACCTGGGGGCCAGTTATCCTGCACAGTCACGGCTTCCCTGCAGACTCTGAAAGGAATCTTAACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 72 bp | AGAGAGCAAAATCCTGAAGTGCAGCAAGCCAGAGTTTaGTTAGCGTGGCCAGGTCAGTGCAGACTAAGTCAA | + |
Preference number: 6 (lower is better) Translates to: REQNPEVQQARV*LAWPGQCRLSQ Trigger: TTGACTTAGTCTGCACTGACCTGGCCACGCTAAGCAAACTCTGGCTTGCTGCACTTCAGGATTTTGCTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 72 bp | GGCCCAATCTGCATGAGACTGTGCAAAGCAAAGTCGTaGAGACTTCTCGTTACTGAAGTTGCTGATCCCAGA | + |
Preference number: 6 (lower is better) Translates to: GPICMRLCKAKS*RLLVTEVADPR Trigger: TCTGGGATCAGCAACTTCAGTAACGAGAAGTCTGCACGACTTTGCTTTGCACAGTCTCATGCAGATTGGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CAA 90 bp | ACCACAGTGTCAGTGAAGCCATTAGCCAGGATTCTACCCAATTTCTaGTACAAGGAACCCAAGCACACCACAGCAGCAAGTTTGGTGGGA | + |
Preference number: 6 (lower is better) Translates to: TTVSVKPLARILPNF*YKEPKHTTAASLVG Trigger: TCCCACCAAACTTGCTGCTGTGGTGTGCTTGGGTTCCTTGTACAAGAAATTGGGTAGAATCCTGGCTAATGGCTTCACTGACACTGTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS TCA 72 bp | ATGCTGTTCAAAAGCTGCTCCAGTATCAGAACCCTCTaGGCTTCATCCACAGTAGCACAGACAACCCCAAAG | + |
Preference number: 6 (lower is better) Translates to: MLFKSCSSIRTL*ASSTVAQTTPK Trigger: CTTTGGGGTTGTCTGTGCTACTGTGGATGAAGCTCAGAGGGTTCTGATACTGGAGCAGCTTTTGAACAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS TCA 72 bp | ACATCTCTCGCTGACTTCAATTTGTCGAAGCTAAGTTaGGCTAACCCAGCAGTAAAGGCTCCATCATCAGCC | + |
Preference number: 6 (lower is better) Translates to: TSLADFNLSKLS*ANPAVKAPSSA Trigger: GGCTGATGATGGAGCCTTTACTGCTGGGTTAGCTCAACTTAGCTTCGACAAATTGAAGTCAGCGAGAGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS TCA 72 bp | CAGATAATCTGCCTGACCACTTCAAGTGAAGCCAGTTaGATGGCTGGTGACTCTCTGGTCAAAATTACTCGG | + |
Preference number: 6 (lower is better) Translates to: QIICLTTSSEAS*MAGDSLVKITR Trigger: CCGAGTAATTTTGACCAGAGAGTCACCAGCCATTCAACTGGCTTCACTTGAAGTGGTCAGGCAGATTATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 72 bp | AGGAGCTGCTCTTCAATAAACCTATGGTCGGTCTCCTaGAGCAAAGGACTTAATATCAAGAGGTCATCCGGA | + |
Preference number: 6 (lower is better) Translates to: RSCSSINLWSVS*SKGLNIKRSSG Trigger: TCCGGATGACCTCTTGATATTAAGTCCTTTGCTGCAGGAGACCGACCATAGGTTTATTGAAGAGCAGCTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 72 bp | GTTAGGACGAGTCTTCTCACCTCTGGACCTAAGCTTTaGTTAGAGCCAGCCACATACTTCAGTAAGTTGGAA | + |
Preference number: 6 (lower is better) Translates to: VRTSLLTSGPKL*LEPATYFSKLE Trigger: TTCCAACTTACTGAAGTATGTGGCTGGCTCTAAGCAAAGCTTAGGTCCAGAGGTGAGAAGACTCGTCCTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 72 bp | TTTACAAAGCTTCAGCCAAAGGGTGAGCTTCCCTACTaGCATGGACGTCAGCATATGATGCAATGTCTCTCT | + |
Preference number: 6 (lower is better) Translates to: FTKLQPKGELPY*HGRQHMMQCLS Trigger: AGAGAGACATTGCATCATATGCTGACGTCCATGGCAGTAGGGAAGCTCACCCTTTGGCTGAAGCTTTGTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS GCA 72 bp | ACTCTTTTAAACACAGACGAGTACCGAGGCCCAATCTaGATGAGACTGTGCAAAGCAAAGTCGTGCAGACTT | + |
Preference number: 6 (lower is better) Translates to: TLLNTDEYRGPI*MRLCKAKSCRL Trigger: AAGTCTGCACGACTTTGCTTTGCACAGTCTCATGCAGATTGGGCCTCGGTACTCGTCTGTGTTTAAAAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 72 bp | CCATTGCCAAGCAGGAGCTGCTCTTCAATAAACCTATaGTCGGTCTCCTGCAGCAAAGGACTTAATATCAAG | + |
Preference number: 6 (lower is better) Translates to: PLPSRSCSSINL*SVSCSKGLNIK Trigger: CTTGATATTAAGTCCTTTGCTGCAGGAGACCGACCATAGGTTTATTGAAGAGCAGCTCCTGCTTGGCAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 72 bp | CAACATGCAACTGAACGGTTTGCTGACGAGCTCCTTTaGTGTGCTTTATGCTGTTCAAAAGCTGCTCCAGTA | + |
Preference number: 6 (lower is better) Translates to: QHATERFADELL*CALCCSKAAPV Trigger: TACTGGAGCAGCTTTTGAACAGCATAAAGCACACCAAAGGAGCTCGTCAGCAAACCGTTCAGTTGCATGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CAA 72 bp | TCAGTGAAGCCATTAGCCAGGATTCTACCCAATTTCTaGTACAAGGAACCCAAGCACACCACAGCAGCAAGT | + |
Preference number: 6 (lower is better) Translates to: SVKPLARILPNF*YKEPKHTTAAS Trigger: ACTTGCTGCTGTGGTGTGCTTGGGTTCCTTGTACAAGAAATTGGGTAGAATCCTGGCTAATGGCTTCACTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CAA 72 bp | GCAAAGCAAAGTCGTGCAGACTTCTCGTTACTGAAGTaGCTGATCCCAGAGCATTCTCATCCAAAAGGAAGG | + |
Preference number: 6 (lower is better) Translates to: AKQSRADFSLLK*LIPEHSHPKGR Trigger: CCTTCCTTTTGGATGAGAATGCTCTGGGATCAGCAACTTCAGTAACGAGAAGTCTGCACGACTTTGCTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS TCA 72 bp | TCCTCTGCTATTGTCATGATAATCTTGCCCTTTCCATaGGGAATTCCCAAAGGACAGTGTGTCACTGAACCG | + |
Preference number: 6 (lower is better) Translates to: SSAIVMIILPFP*GIPKGQCVTEP Trigger: CGGTTCAGTGACACACTGTCCTTTGGGAATTCCTCATGGAAAGGGCAAGATTATCATGACAATAGCAGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 72 bp | GCACACCACAGCAGCAAGTTTGGTGGGAAGGTAACTTaGAGAGTCATCTTTGCTCCGAATAAGATCATTACA | + |
Preference number: 6 (lower is better) Translates to: AHHSSKFGGKVT*RVIFAPNKIIT Trigger: TGTAATGATCTTATTCGGAGCAAAGATGACTCTCCAAGTTACCTTCCCACCAAACTTGCTGCTGTGGTGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CAA 72 bp | GTTGGAAATGGCAGAAACAACATGCAACTGAACGGTTaGCTGACGAGCTCCTTTGGTGTGCTTTATGCTGTT | + |
Preference number: 6 (lower is better) Translates to: VGNGRNNMQLNG*LTSSFGVLYAV Trigger: AACAGCATAAAGCACACCAAAGGAGCTCGTCAGCAAACCGTTCAGTTGCATGTTGTTTCTGCCATTTCCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CAA 72 bp | TATACTCTGCAGACTCAGCATGATCTCATAGCGGCCTaGAGACTCTGCACTCTTCATCGCTTTAAGAATATT | + |
Preference number: 6 (lower is better) Translates to: YTLQTQHDLIAA*RLCTLHRFKNI Trigger: AATATTCTTAAAGCGATGAAGAGTGCAGAGTCTCAAGGCCGCTATGAGATCATGCTGAGTCTGCAGAGTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CCA 72 bp | CTTCAAGTGAAGCCAGTTGAATGGCTGGTGACTCTCTaGTCAAAATTACTCGGTGTAGTACATTTAGCAATT | + |
Preference number: 6 (lower is better) Translates to: LQVKPVEWLVTL*SKLLGVVHLAI Trigger: AATTGCTAAATGTACTACACCGAGTAATTTTGACCAGAGAGTCACCAGCCATTCAACTGGCTTCACTTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CAA 90 bp | AGAATTAACAGTAGTCTTCAAGGCTTGCTTGTGATTTTTATGTCTTaGTACAGCAATTATATAGACCTCTGCCCAGGCTCTCAGCACAGC | + |
Preference number: 6 (lower is better) Translates to: RINSSLQGLLVIFMS*YSNYIDLCPGSQHS Trigger: GCTGTGCTGAGAGCCTGGGCAGAGGTCTATATAATTGCTGTACAAAGACATAAAAATCACAAGCAAGCCTTGAAGACTACTGTTAATTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CAA 72 bp | AGTAGTCTTCAAGGCTTGCTTGTGATTTTTATGTCTTaGTACAGCAATTATATAGACCTCTGCCCAGGCTCT | + |
Preference number: 6 (lower is better) Translates to: SSLQGLLVIFMS*YSNYIDLCPGS Trigger: AGAGCCTGGGCAGAGGTCTATATAATTGCTGTACAAAGACATAAAAATCACAAGCAAGCCTTGAAGACTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |
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CDS CAA 90 bp | CCCGTTTCTCATACTGTCTTCAGAATTAACAGTAGTCTTCAAGGCTaGCTTGTGATTTTTATGTCTTTGTACAGCAATTATATAGACCTC | + |
Preference number: 6 (lower is better) Translates to: PVSHTVFRINSSLQG*LVIFMSLYSNYIDL Trigger: GAGGTCTATATAATTGCTGTACAAAGACATAAAAATCACAAGCAAGCCTTGAAGACTACTGTTAATTCTGAAGACAGTATGAGAAACGGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040583.7 |