RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HEATR5A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000035181

Ensembl transcript IDs: ENSMUST00000040583.7, ENSMUST00000217966.2

Found 320 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTaGGTAATTCTAGATTTGGTTCTTTGTTTGAGACAGGTTTCTCTG +
Preference number: 1 (lower is better)
Translates to: LKPHSGAEAVSPVIS*VILDLVLCLRQVSL
Trigger: CAGAGAAACCTGTCTCAAACAAAGAACCAAATCTAGAATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
3UTR CCA 90 bp GTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTaGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTCTGTCCCTG +
Preference number: 1 (lower is better)
Translates to: VFTYKHNKTESTTCS*SNQFFSILATPLSL
Trigger: CAGGGACAGAGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
3UTR-3UTR TCA 90 bp CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGCTCAGTCTCCTCAGGTaGGTGCCACCCTCCCCTGCT +
Preference number: 2 (lower is better)
Translates to: LKRQNHETTASSHTVGLKLSLLR*VPPSPA
Trigger: AGCAGGGGAGGGTGGCACTCACCTGAGGAGACTGAG...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
3UTR-3UTR GCA 90 bp TTGATACGACCACTGAATAAGGCAGGAGTCCATGTAGAAAGTGGGATGTGGTGTAACAGGATCTCCAAGTaGACTCGTGCCTCAAGTTCC +
Preference number: 2 (lower is better)
Translates to: LIRPLNKAGVHVESGMWCNRISK*TRASSS
Trigger: GGAACTTGAGGCACGAGTGCACTTGGAGATCCTGTT...ACACCACATCCCACTTTCTACATGGACTCCTGCCTTATTCAGTGGTCGTATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
3UTR-3UTR TCA 90 bp CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGATTGTTGATGTTGCTTaGGAAATGCAACACAGTTTG +
Preference number: 2 (lower is better)
Translates to: LKRQNHETTASSHTVGLKIVDVA*EMQHSL
Trigger: CAAACTGTGTTGCATTTCTCAAGCAACATCAACAAT...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
3UTR-3UTR GCA 90 bp GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTATTTTAACAGGAAGCTaGATCATTCTGACACAGTGG +
Preference number: 2 (lower is better)
Translates to: ESTTCSWSNQFFSILATPILTGS*IILTQW
Trigger: CCACTGTGTCAGAATGATGCAGCTTCCTGTTAAAAT...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
3UTR-3UTR CCA 90 bp TTGATACGACCACTGAATAAGGCAGGAGTCCATGTAGAAAGTGGGATGTGGTGTGTAAATTTGGATCTTTaGCACTTTCTTGAAATGCCT +
Preference number: 2 (lower is better)
Translates to: LIRPLNKAGVHVESGMWCVNLDL*HFLEMP
Trigger: AGGCATTTCAAGAAAGTGCCAAAGATCCAAATTTAC...ACACCACATCCCACTTTCTACATGGACTCCTGCCTTATTCAGTGGTCGTATCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
3UTR-3UTR CCA 90 bp GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTAGAACAATACTGAAGTaGAGGGAAAATGATCGTAAA +
Preference number: 2 (lower is better)
Translates to: ESTTCSWSNQFFSILATPRTILK*RENDRK
Trigger: TTTACGATCATTTTCCCTCCACTTCAGTATTGTTCT...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
3UTR-3UTR TCA 90 bp ATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGATTTGGTTCTTTGTTTaGGACAGGTTTCTCTGTGTA +
Preference number: 2 (lower is better)
Translates to: IKQSPPRALGLISFSQFWIWFFV*DRFLCV
Trigger: TACACAGAGAAACCTGTCTCAAACAAAGAACCAAAT...CCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTCTGTTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
3UTR-3UTR TCA 90 bp AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTCACACAGAACAATACTaGAGTGGAGGGAAAATGATC +
Preference number: 2 (lower is better)
Translates to: RVFTYKHNKTESTTCSWSHTEQY*SGGKMI
Trigger: GATCATTTTCCCTCCACTTCAGTATTGTTCTGTGTG...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
3UTR-3UTR TCA 90 bp GTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATCCCTGCTCTAATTGTTaGTGTTGCTTGAGAAATGCA +
Preference number: 2 (lower is better)
Translates to: VFTYKHNKTESTTCSWSNPCSNC*CCLRNA
Trigger: TGCATTTCTCAAGCAACATCAACAATTAGAGCAGGG...ATTAGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
3UTR TCA 72 bp ATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTaGAGCTGTCTCTCCTGTTATAAGTTGGGTAATTCT +
Preference number: 3 (lower is better)
Translates to: IMRPQPQATQWG*SCLSCYKLGNS
Trigger: AGAATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
3UTR-3UTR CAA 90 bp CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTAGGCTGGTTGGAACTTaGATGATCATCCTGTCTCAG +
Preference number: 3 (lower is better)
Translates to: LKPHSGAEAVSPVISWVIRLVGT*MIILSQ
Trigger: CTGAGACAGGATGATCATCAAAGTTCCAACCAGCCT...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
3UTR TCA 72 bp GTGCCACCCTCCCCTGCTCTAATTGTTGATGTTGCTTaGGAAATGCAACACAGTTTGATACGACCACTGAAT +
Preference number: 3 (lower is better)
Translates to: VPPSPALIVDVA*EMQHSLIRPLN
Trigger: ATTCAGTGGTCGTATCAAACTGTGTTGCATTTCTCAAGCAACATCAACAATTAGAGCAGGGGAGGGTGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
3UTR-3UTR CAA 90 bp GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTGAAATGCAACACAGTTaGATACGACCACTGAATAAG +
Preference number: 3 (lower is better)
Translates to: ESTTCSWSNQFFSILATPEMQHS*IRPLNK
Trigger: CTTATTCAGTGGTCGTATCAAACTGTGTTGCATTTC...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
3UTR-3UTR CAA 90 bp GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTGATTTGGTTCTTTGTTaGAGACAGGTTTCTCTGTGT +
Preference number: 3 (lower is better)
Translates to: ESTTCSWSNQFFSILATPDLVLC*RQVSLC
Trigger: ACACAGAGAAACCTGTCTCAAACAAAGAACCAAATC...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
3UTR CCA 72 bp CACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTaGGTAATTCTAGATTTGGTTCTTTGTTTGAGACAG +
Preference number: 3 (lower is better)
Translates to: HSGAEAVSPVIS*VILDLVLCLRQ
Trigger: CTGTCTCAAACAAAGAACCAAATCTAGAATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
3UTR-3UTR CAA 90 bp GTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATCCTCAAGTTCCACTTTaGTCCCCAAAGCAAGGAAAC +
Preference number: 3 (lower is better)
Translates to: VFTYKHNKTESTTCSWSNPQVPL*SPKQGN
Trigger: GTTTCCTTGCTTTGGGGACAAAAGTGGAACTTGAGG...ATTAGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
3UTR TCA 72 bp ATTCTGACACAGTGGTCAATTCACACAGAACAATACTaGAGTGGAGGGAAAATGATCGTAAACAGCCAAAAA +
Preference number: 3 (lower is better)
Translates to: ILTQWSIHTEQY*SGGKMIVNSQK
Trigger: TTTTTGGCTGTTTACGATCATTTTCCCTCCACTTCAGTATTGTTCTGTGTGAATTGACCACTGTGTCAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
3UTR CCA 72 bp TACAAACATAATAAAACAGAGTCCACCACGTGCTCTTaGTCTAATCAGTTTTTCTCAATTCTGGCTACACCT +
Preference number: 3 (lower is better)
Translates to: YKHNKTESTTCS*SNQFFSILATP
Trigger: AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
3UTR-3UTR CAA 90 bp AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTTGGGTAATTCTAGATTaGGTTCTTTGTTTGAGACAG +
Preference number: 3 (lower is better)
Translates to: RVFTYKHNKTESTTCSWSWVILD*VLCLRQ
Trigger: CTGTCTCAAACAAAGAACCAAATCTAGAATTACCCA...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
3UTR-3UTR CAA 90 bp AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTCTCTCCTGTTATAAGTaGGGTAATTCTAGATTTGGT +
Preference number: 3 (lower is better)
Translates to: RVFTYKHNKTESTTCSWSLSCYK*GNSRFG
Trigger: ACCAAATCTAGAATTACCCAACTTATAACAGGAGAG...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGAGGATGGCCAGGTCCTaGGCAAGGAGCTTGCGCGTG +
Preference number: 4 (lower is better)
Translates to: LKRQNHETTASSHTVGLKRMARS*ARSLRV
Trigger: CACGCGCAAGCTCCTTGCTCAGGACCTGGCCATCCT...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTGCCACCGCAATGCAGTaGAAGCACCAGGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LKPHSGAEAVSPVISWVIATAMQ*KHQAAA
Trigger: GGCTGCAGCCTGGTGCTTGCACTGCATTGCGGTGGC...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGCTGGTCCAAGCTTCGTaGCTCTTTTCTGCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: LKRQNHETTASSHTVGLKLVQAS*LFSARA
Trigger: GGCCCGGGCAGAAAAGAGCCACGAAGCTTGGACCAG...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGGGCTCGAAGGAATCCTaGACTCCCACGCAGAAACCC +
Preference number: 4 (lower is better)
Translates to: LKRQNHETTASSHTVGLKGSKES*TPTQKP
Trigger: GGGTTTCTGCGTGGGAGTTCAGGATTCCTTCGAGCC...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTCCCGCTTGTGTGCGCTaGAGTGACAGGCGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: LKPHSGAEAVSPVISWVIPACVR*SDRRLF
Trigger: AAACAGCCGCCTGTCACTTCAGCGCACACAAGCGGG...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTACCAGGCAGCCTGGGTaGTCCTGCATCACTGCACAG +
Preference number: 4 (lower is better)
Translates to: LKPHSGAEAVSPVISWVITRQPG*SCITAQ
Trigger: CTGTGCAGTGATGCAGGATCACCCAGGCTGCCTGGT...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGGACATGCTTTGGCGGTaGTGTCAGGTGGTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LKRQNHETTASSHTVGLKDMLWR*CQVVSL
Trigger: CAGAGACACCACCTGACATCACCGCCAAAGCATGTC...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGGCTAATCACAGACAGTaGTGGAGGCAGGGGCTTAGG +
Preference number: 4 (lower is better)
Translates to: LKRQNHETTASSHTVGLKANHRQ*WRQGLR
Trigger: CCTAAGCCCCTGCCTCCAGCACTGTCTGTGATTAGC...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGTCCTCCTGGGCTACCTaGCAGCTTAGGGTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: LKRQNHETTASSHTVGLKSSWAT*QLRVQF
Trigger: GAACTGAACCCTAAGCTGGCAGGTAGCCCAGGAGGA...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGAGCCTCCAGACTGCCTaGCAGATCTCCTTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LKRQNHETTASSHTVGLKSLQTA*QISFAA
Trigger: TGCTGCAAAGGAGATCTGCCAGGCAGTCTGGAGGCT...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTCGCTCGAAGAATGAATaGGACACAGCGGCGACAGCA +
Preference number: 4 (lower is better)
Translates to: LKPHSGAEAVSPVISWVIRSKNE*DTAATA
Trigger: TGCTGTCGCCGCTGTGTCTCATTCATTCTTCGAGCG...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTTTGTGTGCGCTGAAGTaGCAGGCGGCTGTTTTGAGC +
Preference number: 4 (lower is better)
Translates to: LKPHSGAEAVSPVISWVILCALK*QAAVLS
Trigger: GCTCAAAACAGCCGCCTGTCACTTCAGCGCACACAA...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGCCTGACCACTTCAAGTaGAGCCAGTTGAATGGCTGG +
Preference number: 4 (lower is better)
Translates to: LKRQNHETTASSHTVGLKPDHFK*SQLNGW
Trigger: CCAGCCATTCAACTGGCTTCACTTGAAGTGGTCAGG...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGCCAACAAGAGTCTTCTaGTTCTCCCTGACGTCCTCC +
Preference number: 4 (lower is better)
Translates to: LKRQNHETTASSHTVGLKPTRVF*FSLTSS
Trigger: GGAGGACGTCAGGGAGAAGCAGAAGACTCTTGTTGG...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTCCCACGCAGAAACCCTaGTCCCAGCAGTTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: ESTTCSWSNQFFSILATPPTQKP*SQQFQN
Trigger: GTTCTGGAACTGCTGGGAGCAGGGTTTCTGCGTGGG...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp TTGATACGACCACTGAATAAGGCAGGAGTCCATGTAGAAAGTGGGATGTGGTGTGCACAAACCAGCACATaGTGGCTGGCGGCTACATCC +
Preference number: 4 (lower is better)
Translates to: LIRPLNKAGVHVESGMWCAQTST*WLAATS
Trigger: GGATGTAGCCGCCAGCCAGCATGTGCTGGTTTGTGC...ACACCACATCCCACTTTCTACATGGACTCCTGCCTTATTCAGTGGTCGTATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp TTGATACGACCACTGAATAAGGCAGGAGTCCATGTAGAAAGTGGGATGTGGTGTGAGCAGGGCCTGCAGTaGACGCAGACAAGCCATGAT +
Preference number: 4 (lower is better)
Translates to: LIRPLNKAGVHVESGMWCEQGLQ*TQTSHD
Trigger: ATCATGGCTTGTCTGCGTGCACTGCAGGCCCTGCTC...ACACCACATCCCACTTTCTACATGGACTCCTGCCTTATTCAGTGGTCGTATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTCCCCCTAAGTACCTATaGAGGGATCCCAGAGCCAGT +
Preference number: 4 (lower is better)
Translates to: ESTTCSWSNQFFSILATPPPKYL*RDPRAS
Trigger: ACTGGCTCTGGGATCCCTGCATAGGTACTTAGGGGG...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGGGTGGGAAGGTAACTTaGAGAGTCATCTTTGCTCCG +
Preference number: 4 (lower is better)
Translates to: LKRQNHETTASSHTVGLKGGKVT*RVIFAP
Trigger: CGGAGCAAAGATGACTCTCCAAGTTACCTTCCCACC...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp CAGTTAGAGGACATACAGACTGTTAGAGGACATCCCTTCATTTTCAAAGCAGTGCCAGCACATGCTGGCTaGCGGCTACATCCGTGGAAC +
Preference number: 4 (lower is better)
Translates to: QLEDIQTVRGHPFIFKAVPAHAG*RLHPWN
Trigger: GTTCCACGGATGTAGCCGCCAGCCAGCATGTGCTGG...CACTGCTTTGAAAATGAAGGGATGTCCTCTAACAGTCTGTATGTCCTCTAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTCGGAGCTGGTCACTGTaGTCTGTGGCAGCCATGAAA +
Preference number: 4 (lower is better)
Translates to: ESTTCSWSNQFFSILATPRSWSL*SVAAMK
Trigger: TTTCATGGCTGCCACAGACCACAGTGACCAGCTCCG...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGCCCTTCACCAAACTCTaGCAGGGTTTCCTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: LKRQNHETTASSHTVGLKPFTKL*QGFLLR
Trigger: TCTGAGAAGGAAACCCTGCCAGAGTTTGGTGAAGGG...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGTTTCTGCCCGGGCCATaGGGGAAGTTAAGATTCCTT +
Preference number: 4 (lower is better)
Translates to: LKRQNHETTASSHTVGLKFLPGP*GKLRFL
Trigger: AAGGAATCTTAACTTCCCCCATGGCCCGGGCAGAAA...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTGGATGCTGGAGTTCCTaGCCAGGTTCTTGGCATGCT +
Preference number: 4 (lower is better)
Translates to: ESTTCSWSNQFFSILATPGCWSS*PGSWHA
Trigger: AGCATGCCAAGAACCTGGCCAGGAACTCCAGCATCC...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp CAGTTAGAGGACATACAGACTGTTAGAGGACATCCCTTCATTTTCAAAGCAGTGCAGGACCTAGCGTCATaGGAGCAGCAACCAACAGCC +
Preference number: 4 (lower is better)
Translates to: QLEDIQTVRGHPFIFKAVQDLAS*EQQPTA
Trigger: GGCTGTTGGTTGCTGCTCTCATGACGCTAGGTCCTG...CACTGCTTTGAAAATGAAGGGATGTCCTCTAACAGTCTGTATGTCCTCTAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTATGGAGTGGAGGAGCTaGCAGGTCTTCATTTGCACC +
Preference number: 4 (lower is better)
Translates to: ESTTCSWSNQFFSILATPMEWRS*QVFICT
Trigger: GGTGCAAATGAAGACCTGTCAGCTCCTCCACTCCAT...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTGCGGCCTTGAGACTCTaGACTCTTCATCGCTTTAAG +
Preference number: 4 (lower is better)
Translates to: LKPHSGAEAVSPVISWVIAALRL*TLHRFK
Trigger: CTTAAAGCGATGAAGAGTGCAGAGTCTCAAGGCCGC...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp TTGATACGACCACTGAATAAGGCAGGAGTCCATGTAGAAAGTGGGATGTGGTGTTTTGCAGCAGCTATCTaGGCCTTCTCTCCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: LIRPLNKAGVHVESGMWCFAAAI*AFSPSR
Trigger: CCTGCTTGGAGAGAAGGCGCAGATAGCTGCTGCAAA...ACACCACATCCCACTTTCTACATGGACTCCTGCCTTATTCAGTGGTCGTATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTACTCTTGCTCGTCTCTaGTGTGTAGAAAGCACCACC +
Preference number: 4 (lower is better)
Translates to: LKPHSGAEAVSPVISWVITLARL*CVESTT
Trigger: GGTGGTGCTTTCTACACAGCAGAGACGAGCAAGAGT...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTCTGTTTCTAGATCTCTaGGGGACGCTGGAAAGACAC +
Preference number: 4 (lower is better)
Translates to: LKPHSGAEAVSPVISWVILFLDL*GTLERH
Trigger: GTGTCTTTCCAGCGTCCCCCAGAGATCTAGAAACAG...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTACTGTGCAGGATAACTaGCCCCCAGGTAACTTCACA +
Preference number: 4 (lower is better)
Translates to: LKPHSGAEAVSPVISWVITVQDN*PPGNFT
Trigger: TGTGAAGTTACCTGGGGGCCAGTTATCCTGCACAGT...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTCTTCGGGTTTCCTCCTaGCTATGTCCTGAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LKPHSGAEAVSPVISWVILRVSS*LCPEAS
Trigger: AGAAGCTTCAGGACATAGCCAGGAGGAAACCCGAAG...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
3UTR CAA 72 bp GGATCTCCAAGTGCACTCGTGCCTCAAGTTCCACTTTaGTCCCCAAAGCAAGGAAACACCAAGCGTTACATT +
Preference number: 4 (lower is better)
Translates to: GSPSALVPQVPL*SPKQGNTKRYI
Trigger: AATGTAACGCTTGGTGTTTCCTTGCTTTGGGGACAAAAGTGGAACTTGAGGCACGAGTGCACTTGGAGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp CAGTTAGAGGACATACAGACTGTTAGAGGACATCCCTTCATTTTCAAAGCAGTGACGAGCACTCTGCTTTaGGCCTGCTCCTGGATGCTT +
Preference number: 4 (lower is better)
Translates to: QLEDIQTVRGHPFIFKAVTSTLL*ACSWML
Trigger: AAGCATCCAGGAGCAGGCTCAAAGCAGAGTGCTCGT...CACTGCTTTGAAAATGAAGGGATGTCCTCTAACAGTCTGTATGTCCTCTAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGAGTATTGAAGAAAGCTaGGTCAGCAGATCCACAGCA +
Preference number: 4 (lower is better)
Translates to: LKRQNHETTASSHTVGLKSIEES*VSRSTA
Trigger: TGCTGTGGATCTGCTGACTCAGCTTTCTTCAATACT...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTAGAATCAATGGTCAGTaGCAAGGAGTGGAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: ESTTCSWSNQFFSILATPRINGQ*QGVECP
Trigger: TGGGCACTCCACTCCTTGTCACTGACCATTGATTCT...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGGATGCAATGTCTCTCTaGTATCCTGGCACAAGCTTT +
Preference number: 4 (lower is better)
Translates to: LKRQNHETTASSHTVGLKDAMSL*YPGTSF
Trigger: AAAGCTTGTGCCAGGATATCAGAGAGACATTGCATC...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp TTGATACGACCACTGAATAAGGCAGGAGTCCATGTAGAAAGTGGGATGTGGTGTTGTTCCAGAATCACATaGCCCGGAAACTCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: LIRPLNKAGVHVESGMWCCSRIT*PGNSGS
Trigger: AGAGCCAGAGTTTCCGGGTCATGTGATTCTGGAACA...ACACCACATCCCACTTTCTACATGGACTCCTGCCTTATTCAGTGGTCGTATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTAAGAAGACCAGCAGCTaGAGAGGACCCGTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: ESTTCSWSNQFFSILATPKKTSS*RGPVSH
Trigger: ATGAGAAACGGGTCCTCTTCAGCTGCTGGTCTTCTT...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTCAAACAAGCCAGAACTaGTCTTCGCAGCAACAGGTA +
Preference number: 4 (lower is better)
Translates to: LKPHSGAEAVSPVISWVIQTSQN*SSQQQV
Trigger: TACCTGTTGCTGCGAAGAGCAGTTCTGGCTTGTTTG...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTGCGGCACAGATAATCTaGCTGACCACTTCAAGTGAA +
Preference number: 4 (lower is better)
Translates to: LKPHSGAEAVSPVISWVIAAQII*LTTSSE
Trigger: TTCACTTGAAGTGGTCAGGCAGATTATCTGTGCCGC...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp TTGATACGACCACTGAATAAGGCAGGAGTCCATGTAGAAAGTGGGATGTGGTGTGTTCAAGAAGACACTTaGCAGCAGCACATCGGACAG +
Preference number: 4 (lower is better)
Translates to: LIRPLNKAGVHVESGMWCVQEDT*QQHIGQ
Trigger: CTGTCCGATGTGCTGCTGCCAAGTGTCTTCTTGAAC...ACACCACATCCCACTTTCTACATGGACTCCTGCCTTATTCAGTGGTCGTATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTGTGAAGCCAGTTGAATaGCTGGTGACTCTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: ESTTCSWSNQFFSILATPVKPVE*LVTLWS
Trigger: TGACCAGAGAGTCACCAGCCATTCAACTGGCTTCAC...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp TTGATACGACCACTGAATAAGGCAGGAGTCCATGTAGAAAGTGGGATGTGGTGTTCTTTAGCTGGATGCTaGAGTTCCTGGCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: LIRPLNKAGVHVESGMWCSLAGC*SSWPGS
Trigger: AGAACCTGGCCAGGAACTCCAGCATCCAGCTAAAGA...ACACCACATCCCACTTTCTACATGGACTCCTGCCTTATTCAGTGGTCGTATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp ATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGGAGTCGCTCGAAGAATaGATGAGACACAGCGGCGAC +
Preference number: 4 (lower is better)
Translates to: IKQSPPRALGLISFSQFWESLEE*MRHSGD
Trigger: GTCGCCGCTGTGTCTCATTCATTCTTCGAGCGACTC...CCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTCTGTTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp TTGATACGACCACTGAATAAGGCAGGAGTCCATGTAGAAAGTGGGATGTGGTGTATCTTGCCCTTTCCATaGGGAATTCCCAAAGGACAG +
Preference number: 4 (lower is better)
Translates to: LIRPLNKAGVHVESGMWCILPFP*GIPKGQ
Trigger: CTGTCCTTTGGGAATTCCTCATGGAAAGGGCAAGAT...ACACCACATCCCACTTTCTACATGGACTCCTGCCTTATTCAGTGGTCGTATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp ATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGGGTCTGTGGCAGCCATaGAAGCCATGCGGATCAAGT +
Preference number: 4 (lower is better)
Translates to: IKQSPPRALGLISFSQFWGLWQP*KPCGSS
Trigger: ACTTGATCCGCATGGCTTTCATGGCTGCCACAGACC...CCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTCTGTTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp CAGTTAGAGGACATACAGACTGTTAGAGGACATCCCTTCATTTTCAAAGCAGTGGTCAGGTGGTGTCTCTaGAGTGAAGGCTGGTCTAAG +
Preference number: 4 (lower is better)
Translates to: QLEDIQTVRGHPFIFKAVVRWCL*SEGWSK
Trigger: CTTAGACCAGCCTTCACTTCAGAGACACCACCTGAC...CACTGCTTTGAAAATGAAGGGATGTCCTCTAACAGTCTGTATGTCCTCTAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp TTGATACGACCACTGAATAAGGCAGGAGTCCATGTAGAAAGTGGGATGTGGTGTAAGAGAGCAAAATCCTaGAGTGCAGCAAGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: LIRPLNKAGVHVESGMWCKRAKS*SAASQS
Trigger: ACTCTGGCTTGCTGCACTTCAGGATTTTGCTCTCTT...ACACCACATCCCACTTTCTACATGGACTCCTGCCTTATTCAGTGGTCGTATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp CAGTTAGAGGACATACAGACTGTTAGAGGACATCCCTTCATTTTCAAAGCAGTGCTGGCAGATCTCCTTTaGAGCAGCTATCTGCGCCTT +
Preference number: 4 (lower is better)
Translates to: QLEDIQTVRGHPFIFKAVLADLL*SSYLRL
Trigger: AAGGCGCAGATAGCTGCTGCAAAGGAGATCTGCCAG...CACTGCTTTGAAAATGAAGGGATGTCCTCTAACAGTCTGTATGTCCTCTAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTATGCACGTGATAGAGTaGACCCGCAGAATCAATGGT +
Preference number: 4 (lower is better)
Translates to: ESTTCSWSNQFFSILATPMHVIE*TRRING
Trigger: ACCATTGATTCTGCGGGTGCACTCTATCACGTGCAT...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTACAGAGTTCCAGGGTTaGAAAGACCAAAGACTTCCC +
Preference number: 4 (lower is better)
Translates to: ESTTCSWSNQFFSILATPTEFQG*KDQRLP
Trigger: GGGAAGTCTTTGGTCTTTGCAACCCTGGAACTCTGT...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGGTAGTGCCAAGGTTGTaGATCAGATTTCCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: LKRQNHETTASSHTVGLKVVPRL*IRFPSS
Trigger: AGAACTTGGAAATCTGATCCACAACCTTGGCACTAC...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTGAGCGGCTCCAACATTaGCTTGATACTGTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: ESTTCSWSNQFFSILATPERLQH*LDTVPE
Trigger: TTCTGGAACAGTATCAAGCCAATGTTGGAGCCGCTC...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTCAGCTAAGATCTCCATaGTGGAGGCACTCTCATTGT +
Preference number: 4 (lower is better)
Translates to: ESTTCSWSNQFFSILATPQLRSP*WRHSHC
Trigger: ACAATGAGAGTGCCTCCACCATGGAGATCTTAGCTG...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTTCCTTCACATGTTCTTaGGCGGCACAGATAATCTGC +
Preference number: 4 (lower is better)
Translates to: ESTTCSWSNQFFSILATPSFTCS*AAQIIC
Trigger: GCAGATTATCTGTGCCGCCCAAGAACATGTGAAGGA...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTCTTAGGGTTCAGTTCTaGGAGCTGTCTAACGAGGAT +
Preference number: 4 (lower is better)
Translates to: ESTTCSWSNQFFSILATPLRVQF*ELSNED
Trigger: ATCCTCGTTAGACAGCTCCCAGAACTGAACCCTAAG...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp CAGTTAGAGGACATACAGACTGTTAGAGGACATCCCTTCATTTTCAAAGCAGTGTGGATGCTTCTTCATTaGGCAGCAAGCTGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: QLEDIQTVRGHPFIFKAVWMLLH*AASCEP
Trigger: TGGCTCACAGCTTGCTGCTCAATGAAGAAGCATCCA...CACTGCTTTGAAAATGAAGGGATGTCCTCTAACAGTCTGTATGTCCTCTAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTTTGTCGAAGCTAAGTTaGGCTAACCCAGCAGTAAAG +
Preference number: 4 (lower is better)
Translates to: ESTTCSWSNQFFSILATPLSKLS*ANPAVK
Trigger: CTTTACTGCTGGGTTAGCTCAACTTAGCTTCGACAA...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTCAGGGTCTTCGGCTTTaGAGCCTTTCCTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RVFTYKHNKTESTTCSWSQGLRL*SLSSWA
Trigger: AGCCCAGGAGGAAAGGCTTCAAAGCCGAAGACCCTG...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTAGGAGATCACCACAGTaGGAAATGAAACTCTTGACA +
Preference number: 4 (lower is better)
Translates to: LKPHSGAEAVSPVISWVIRRSPQ*EMKLLT
Trigger: TGTCAAGAGTTTCATTTCGCACTGTGGTGATCTCCT...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTCTATGGTCGGTCTCCTaGAGCAAAGGACTTAATATC +
Preference number: 4 (lower is better)
Translates to: ESTTCSWSNQFFSILATPLWSVS*SKGLNI
Trigger: GATATTAAGTCCTTTGCTGCAGGAGACCGACCATAG...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTTTGCCAAGCAGGAGCTaGTCTTCAATAAACCTATGG +
Preference number: 4 (lower is better)
Translates to: ESTTCSWSNQFFSILATPLPSRS*SSINLW
Trigger: CCATAGGTTTATTGAAGAGCAGCTCCTGCTTGGCAA...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp TTGATACGACCACTGAATAAGGCAGGAGTCCATGTAGAAAGTGGGATGTGGTGTACTAACAACCCCACTTaGTATCCAAGCACTGCAAAC +
Preference number: 4 (lower is better)
Translates to: LIRPLNKAGVHVESGMWCTNNPT*YPSTAN
Trigger: GTTTGCAGTGCTTGGATAGCAAGTGGGGTTGTTAGT...ACACCACATCCCACTTTCTACATGGACTCCTGCCTTATTCAGTGGTCGTATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTAGCAAAATCCTGAAGTaGAGCAAGCCAGAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: ESTTCSWSNQFFSILATPSKILK*SKPEFA
Trigger: AGCAAACTCTGGCTTGCTGCACTTCAGGATTTTGCT...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTTTCGTGGCTCTTTTCTaGCCGGGCCATGGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: RVFTYKHNKTESTTCSWSFVALF*PGHGGS
Trigger: ACTTCCCCCATGGCCCGGGCAGAAAAGAGCCACGAA...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp CAGTTAGAGGACATACAGACTGTTAGAGGACATCCCTTCATTTTCAAAGCAGTGTACCGAGGCCCAATCTaGATGAGACTGTGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: QLEDIQTVRGHPFIFKAVYRGPI*MRLCKA
Trigger: TGCTTTGCACAGTCTCATGCAGATTGGGCCTCGGTA...CACTGCTTTGAAAATGAAGGGATGTCCTCTAACAGTCTGTATGTCCTCTAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp GTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATCTGGACCAGGCAGCCTaGGTGATCCTGCATCACTGC +
Preference number: 4 (lower is better)
Translates to: VFTYKHNKTESTTCSWSNLDQAA*VILHHC
Trigger: GCAGTGATGCAGGATCACCCAGGCTGCCTGGTCCAG...ATTAGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTCCGGGCTTTCAGGGCTaGGGAAGAAGCCATGACTCT +
Preference number: 4 (lower is better)
Translates to: RVFTYKHNKTESTTCSWSPGFQG*GRSHDS
Trigger: AGAGTCATGGCTTCTTCCCCAGCCCTGAAAGCCCGG...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp TTGATACGACCACTGAATAAGGCAGGAGTCCATGTAGAAAGTGGGATGTGGTGTATGGACGTCAGCATATaGTGCAATGTCTCTCTGATA +
Preference number: 4 (lower is better)
Translates to: LIRPLNKAGVHVESGMWCMDVSI*CNVSLI
Trigger: TATCAGAGAGACATTGCATCATATGCTGACGTCCAT...ACACCACATCCCACTTTCTACATGGACTCCTGCCTTATTCAGTGGTCGTATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp ATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGGCTTCTTTTCCAGCCTaGATCTTCGTCAGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: IKQSPPRALGLISFSQFWASFPA*IFVREE
Trigger: CTCTTCCCTGACGAAGATTCAGGCTGGAAAAGAAGC...CCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTCTGTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTCCAAGTCCTGATCACTaGCAATTCTCCACCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RVFTYKHNKTESTTCSWSPSPDH*QFSTWA
Trigger: GGCCCAGGTGGAGAATTGGCAGTGATCAGGACTTGG...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp CAGTTAGAGGACATACAGACTGTTAGAGGACATCCCTTCATTTTCAAAGCAGTGCAGCAGCAAGTTTGGTaGGAAGGTAACTTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: QLEDIQTVRGHPFIFKAVQQQVW*EGNLES
Trigger: ACTCTCCAAGTTACCTTCCCACCAAACTTGCTGCTG...CACTGCTTTGAAAATGAAGGGATGTCCTCTAACAGTCTGTATGTCCTCTAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp AAATGGAAACAAAATAAAACCAGAATTACCAAGAACGTTAAGTTTCGGTCCCTCCAAACCAGCACATGCTaGCTGGCGGCTACATCCGTG +
Preference number: 4 (lower is better)
Translates to: KWKQNKTRITKNVKFRSLQTSTC*LAATSV
Trigger: CACGGATGTAGCCGCCAGCCAGCATGTGCTGGTTTG...GAGGGACCGAAACTTAACGTTCTTGGTAATTCTGGTTTTATTTTGTTTCCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGTCAGTAAGTTGGAAATaGCAGAAACAACATGCAACT +
Preference number: 4 (lower is better)
Translates to: LKRQNHETTASSHTVGLKSVSWK*QKQHAT
Trigger: AGTTGCATGTTGTTTCTGCCATTTCCAACTTACTGA...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp ATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCACCCGCAGAATCAATaGTCAGTGACAAGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: IKQSPPRALGLISFSQFWHPQNQ*SVTRSG
Trigger: TCCACTCCTTGTCACTGACCATTGATTCTGCGGGTG...CCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTCTGTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTTCTGCAGACTCAGCATaGTCTCATAGCGGCCTTGAG +
Preference number: 4 (lower is better)
Translates to: RVFTYKHNKTESTTCSWSSADSA*SHSGLE
Trigger: CTCAAGGCCGCTATGAGATCATGCTGAGTCTGCAGA...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTCAGACGGCGTCAATCTaGGTCTGTGTGGCTTTAGGA +
Preference number: 4 (lower is better)
Translates to: RVFTYKHNKTESTTCSWSQTASI*VCVALG
Trigger: TCCTAAAGCCACACAGACGCAGATTGACGCCGTCTG...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTCCTTCCAGGGTCACTTaGCAGGTAAACGAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: RVFTYKHNKTESTTCSWSPSRVT*QVNESP
Trigger: AGGAGACTCGTTTACCTGGCAAGTGACCCTGGAAGG...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTCACAGGCAACACCATTaGCAAGCAGGAGCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: RVFTYKHNKTESTTCSWSHRQHH*QAGAAL
Trigger: AAGAGCAGCTCCTGCTTGGCAATGGTGTTGCCTGTG...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTATCTCTGGGGGACGCTaGAAAGACACACTTCCACAG +
Preference number: 4 (lower is better)
Translates to: RVFTYKHNKTESTTCSWSISGGR*KDTLPQ
Trigger: CTGTGGAAGTGTGTCTTTCCAGCGTCCCCCAGAGAT...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp GTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATAATCACAGACAGTGCTaGAGGCAGGGGCTTAGGCAC +
Preference number: 4 (lower is better)
Translates to: VFTYKHNKTESTTCSWSNNHRQC*RQGLRH
Trigger: GTGCCTAAGCCCCTGCCTCCAGCACTGTCTGTGATT...ATTAGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp ATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGGCTGACGAGCTCCTTTaGTGTGCTTTATGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: IKQSPPRALGLISFSQFWADELL*CALCCS
Trigger: TGAACAGCATAAAGCACACCAAAGGAGCTCGTCAGC...CCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTCTGTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp AAATGGAAACAAAATAAAACCAGAATTACCAAGAACGTTAAGTTTCGGTCCCTCCCCAGAGCCAGTGAGTaGCCTGTTCTGGTAACCACA +
Preference number: 4 (lower is better)
Translates to: KWKQNKTRITKNVKFRSLPRASE*PVLVTT
Trigger: TGTGGTTACCAGAACAGGCCACTCACTGGCTCTGGG...GAGGGACCGAAACTTAACGTTCTTGGTAATTCTGGTTTTATTTTGTTTCCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp AAATGGAAACAAAATAAAACCAGAATTACCAAGAACGTTAAGTTTCGGTCCCTCCAGGCCTTGAGAGATTaGCACCGCCTTCATCTGGGT +
Preference number: 4 (lower is better)
Translates to: KWKQNKTRITKNVKFRSLQALRD*HRLHLG
Trigger: ACCCAGATGAAGGCGGTGCCAATCTCTCAAGGCCTG...GAGGGACCGAAACTTAACGTTCTTGGTAATTCTGGTTTTATTTTGTTTCCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp GTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATTCTTCTGCTTCTCCCTaGCGTCCTCCCTGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: VFTYKHNKTESTTCSWSNSSASP*RPPCLL
Trigger: CAACAAACAGGGAGGACGTCAGGGAGAAGCAGAAGA...ATTAGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp AAATGGAAACAAAATAAAACCAGAATTACCAAGAACGTTAAGTTTCGGTCCCTCGCCGGCTTTGGATACTaGAAAATGGAGTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: KWKQNKTRITKNVKFRSLAGFGY*KMEWRS
Trigger: GCTCCTCCACTCCATTTTTCAGTATCCAAAGCCGGC...GAGGGACCGAAACTTAACGTTCTTGGTAATTCTGGTTTTATTTTGTTTCCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTGAGGCCCAATCTGCATaGGACTGTGCAAAGCAAAGT +
Preference number: 4 (lower is better)
Translates to: RVFTYKHNKTESTTCSWSEAQSA*DCAKQS
Trigger: ACTTTGCTTTGCACAGTCTCATGCAGATTGGGCCTC...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp ATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCCAGTCAGTATACTCTaGAGACTCAGCATGATCTCA +
Preference number: 4 (lower is better)
Translates to: IKQSPPRALGLISFSQFWPVSIL*RLSMIS
Trigger: TGAGATCATGCTGAGTCTGCAGAGTATACTGACTGG...CCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTCTGTTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp GTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATTGTCCAGAAGGCCTGTaGTGGAATCCTGGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: VFTYKHNKTESTTCSWSNCPEGL*WNPGAK
Trigger: CTTTGCTCCAGGATTCCAGCACAGGCCTTCTGGACA...ATTAGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTCCACAGCAGCAAGTTTaGTGGGAAGGTAACTTGGAG +
Preference number: 4 (lower is better)
Translates to: RVFTYKHNKTESTTCSWSPQQQV*WEGNLE
Trigger: CTCCAAGTTACCTTCCCACCAAACTTGCTGCTGTGG...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp CAGTTAGAGGACATACAGACTGTTAGAGGACATCCCTTCATTTTCAAAGCAGTGGACGGTTGTCACTTCTaGGCTGGTAGACAAAATAAA +
Preference number: 4 (lower is better)
Translates to: QLEDIQTVRGHPFIFKAVDGCHF*AGRQNK
Trigger: TTTATTTTGTCTACCAGCCCAGAAGTGACAACCGTC...CACTGCTTTGAAAATGAAGGGATGTCCTCTAACAGTCTGTATGTCCTCTAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp GTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATCATTGTACAGCTGGCTaGGAGCTTCTTTTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: VFTYKHNKTESTTCSWSNHCTAG*ELLFQP
Trigger: AGGCTGGAAAAGAAGCTCTCAGCCAGCTGTACAATG...ATTAGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp GTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATCACGCAGACAAGCCATaGTGCTTTCCAAGCTTGCAT +
Preference number: 4 (lower is better)
Translates to: VFTYKHNKTESTTCSWSNHADKP*CFPSLH
Trigger: ATGCAAGCTTGGAAAGCATCATGGCTTGTCTGCGTG...ATTAGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp AAATGGAAACAAAATAAAACCAGAATTACCAAGAACGTTAAGTTTCGGTCCCTCACTCGGACACTTTCCTaGTTGCCTTTTACAGCAGCC +
Preference number: 4 (lower is better)
Translates to: KWKQNKTRITKNVKFRSLTRTLS*LPFTAA
Trigger: GGCTGCTGTAAAAGGCAATCAGGAAAGTGTCCGAGT...GAGGGACCGAAACTTAACGTTCTTGGTAATTCTGGTTTTATTTTGTTTCCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTGAGCCTGCTCCTGGATaGTTAGCAGTTACAGCTTTA +
Preference number: 4 (lower is better)
Translates to: RVFTYKHNKTESTTCSWSEPAPG*LAVTAL
Trigger: TAAAGCTGTAACTGCTAAGCATCCAGGAGCAGGCTC...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTTCGCCTTCTTCCTCCTaGATTGTATCCACGCAAGTT +
Preference number: 4 (lower is better)
Translates to: RVFTYKHNKTESTTCSWSSPSSS*IVSTQV
Trigger: AACTTGCGTGGATACAATGCAGGAGGAAGAAGGCGA...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp AAATGGAAACAAAATAAAACCAGAATTACCAAGAACGTTAAGTTTCGGTCCCTCTTCAGGAGAGCACACTaGAGGAAGCTCAGCAAGGAT +
Preference number: 4 (lower is better)
Translates to: KWKQNKTRITKNVKFRSLFRRAH*RKLSKD
Trigger: ATCCTTGCTGAGCTTCCTGCAGTGTGCTCTCCTGAA...GAGGGACCGAAACTTAACGTTCTTGGTAATTCTGGTTTTATTTTGTTTCCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp AAATGGAAACAAAATAAAACCAGAATTACCAAGAACGTTAAGTTTCGGTCCCTCGGAGAATTGAGATGCTaGCTTCAGGAGAGCACACTG +
Preference number: 4 (lower is better)
Translates to: KWKQNKTRITKNVKFRSLGELRC*LQESTL
Trigger: CAGTGTGCTCTCCTGAAGGCAGCATCTCAATTCTCC...GAGGGACCGAAACTTAACGTTCTTGGTAATTCTGGTTTTATTTTGTTTCCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp GTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATATTCCTTTCAGAGTCTaGAGGGAAGCCGTGACTGTG +
Preference number: 4 (lower is better)
Translates to: VFTYKHNKTESTTCSWSNIPFRV*REAVTV
Trigger: CACAGTCACGGCTTCCCTGCAGACTCTGAAAGGAAT...ATTAGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTTCAGCATATCTCCACTaGCTCGAAGGAATCCTGAAC +
Preference number: 4 (lower is better)
Translates to: RVFTYKHNKTESTTCSWSSAYLH*LEGILN
Trigger: GTTCAGGATTCCTTCGAGCCAGTGGAGATATGCTGA...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp ATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGTCTTCAATAAACCTATaGTCGGTCTCCTGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: IKQSPPRALGLISFSQFWSSINL*SVSCSK
Trigger: TTTGCTGCAGGAGACCGACCATAGGTTTATTGAAGA...CCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTCTGTTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp AAATGGAAACAAAATAAAACCAGAATTACCAAGAACGTTAAGTTTCGGTCCCTCAGTCACTGCTTCTGGTaGAGACTTGAGTATTGCGAG +
Preference number: 4 (lower is better)
Translates to: KWKQNKTRITKNVKFRSLSHCFW*RLEYCE
Trigger: CTCGCAATACTCAAGTCTTCACCAGAAGCAGTGACT...GAGGGACCGAAACTTAACGTTCTTGGTAATTCTGGTTTTATTTTGTTTCCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp AAATGGAAACAAAATAAAACCAGAATTACCAAGAACGTTAAGTTTCGGTCCCTCACAGGAACTCCACGCTaGTTCCTAGAATCAGATGGA +
Preference number: 4 (lower is better)
Translates to: KWKQNKTRITKNVKFRSLTGTPR*FLESDG
Trigger: TCCATCTGATTCTAGGAATCAGCGTGGAGTTCCTGT...GAGGGACCGAAACTTAACGTTCTTGGTAATTCTGGTTTTATTTTGTTTCCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp AAATGGAAACAAAATAAAACCAGAATTACCAAGAACGTTAAGTTTCGGTCCCTCTACTGTAGGGAGAATTaGGATGCTGCCTTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: KWKQNKTRITKNVKFRSLYCREN*DAAFRR
Trigger: TCTCCTGAAGGCAGCATCTCAATTCTCCCTACAGTA...GAGGGACCGAAACTTAACGTTCTTGGTAATTCTGGTTTTATTTTGTTTCCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp CAGTTAGAGGACATACAGACTGTTAGAGGACATCCCTTCATTTTCAAAGCAGTGATTACCATCACTCAATaGGGCATCCATAACTTTCTT +
Preference number: 4 (lower is better)
Translates to: QLEDIQTVRGHPFIFKAVITITQ*GIHNFL
Trigger: AAGAAAGTTATGGATGCCGCATTGAGTGATGGTAAT...CACTGCTTTGAAAATGAAGGGATGTCCTCTAACAGTCTGTATGTCCTCTAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp AAATGGAAACAAAATAAAACCAGAATTACCAAGAACGTTAAGTTTCGGTCCCTCCCCAAAGAGCTTGGATaGAGAGCTAATCACAGACAG +
Preference number: 4 (lower is better)
Translates to: KWKQNKTRITKNVKFRSLPKELG*RANHRQ
Trigger: CTGTCTGTGATTAGCTCTGCATCCAAGCTCTTTGGG...GAGGGACCGAAACTTAACGTTCTTGGTAATTCTGGTTTTATTTTGTTTCCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTCGAGCTCCTTTGGTGTaGTTTATGCTGTTCAAAAGC +
Preference number: 4 (lower is better)
Translates to: RVFTYKHNKTESTTCSWSRAPLV*FMLFKS
Trigger: GCTTTTGAACAGCATAAAGCACACCAAAGGAGCTCG...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp AAATGGAAACAAAATAAAACCAGAATTACCAAGAACGTTAAGTTTCGGTCCCTCGGACACTTTCCTGATTaGCTTTTACAGCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: KWKQNKTRITKNVKFRSLGHFPD*LLQQPP
Trigger: TGGAGGCTGCTGTAAAAGGCAATCAGGAAAGTGTCC...GAGGGACCGAAACTTAACGTTCTTGGTAATTCTGGTTTTATTTTGTTTCCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTATGACCCGGAAACTCTaGCTCTGCAATATCTGCAAA +
Preference number: 4 (lower is better)
Translates to: RVFTYKHNKTESTTCSWSMTRKL*LCNICK
Trigger: TTTGCAGATATTGCAGAGCCAGAGTTTCCGGGTCAT...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
3UTR CAA 72 bp GCTGTCTCTCCTGTTATAAGTTGGGTAATTCTAGATTaGGTTCTTTGTTTGAGACAGGTTTCTCTGTGTAGC +
Preference number: 4 (lower is better)
Translates to: AVSPVISWVILD*VLCLRQVSLCS
Trigger: GCTACACAGAGAAACCTGTCTCAAACAAAGAACCAAATCTAGAATTACCCAACTTATAACAGGAGAGACAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp AAATGGAAACAAAATAAAACCAGAATTACCAAGAACGTTAAGTTTCGGTCCCTCAACGTCTCTGCTGACTaGACTGTTTCCTTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: KWKQNKTRITKNVKFRSLNVSAD*TVSFQH
Trigger: ATGCTGAAAGGAAACAGTTCAGTCAGCAGAGACGTT...GAGGGACCGAAACTTAACGTTCTTGGTAATTCTGGTTTTATTTTGTTTCCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR TCA 90 bp AAATGGAAACAAAATAAAACCAGAATTACCAAGAACGTTAAGTTTCGGTCCCTCGCTCCAACATTGGCTTaGTACTGTTCCAGAATCACA +
Preference number: 4 (lower is better)
Translates to: KWKQNKTRITKNVKFRSLAPTLA*YCSRIT
Trigger: TGTGATTCTGGAACAGTATCAAGCCAATGTTGGAGC...GAGGGACCGAAACTTAACGTTCTTGGTAATTCTGGTTTTATTTTGTTTCCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp GTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATCTAAGATCTCCATGGTaGAGGCACTCTCATTGTACA +
Preference number: 4 (lower is better)
Translates to: VFTYKHNKTESTTCSWSNLRSPW*RHSHCT
Trigger: TGTACAATGAGAGTGCCTCCACCATGGAGATCTTAG...ATTAGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CCA 90 bp GTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATTGGCTGGTGACTCTCTaGTCAAAATTACTCGGTGTA +
Preference number: 4 (lower is better)
Translates to: VFTYKHNKTESTTCSWSNWLVTL*SKLLGV
Trigger: TACACCGAGTAATTTTGACCAGAGAGTCACCAGCCA...ATTAGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR GCA 90 bp AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTACACAGCAAATCCTCTaGTATTGTCATGATAATCTT +
Preference number: 4 (lower is better)
Translates to: RVFTYKHNKTESTTCSWSTQQIL*YCHDNL
Trigger: AAGATTATCATGACAATAGCAGAGGATTTGCTGTGT...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 90 bp CAACACTATAAAGGATGGCCAGGTCCTGAGCAAGGAGCTTGCGCGTaGGGGGTCCCGGGGAGCTGTTCAGCAAGGACAGGAGCTGCCCAA +
Preference number: 5 (lower is better)
Translates to: QHYKGWPGPEQGACA*GVPGSCSARTGAAQ
Trigger: TTGGGCAGCTCCTGTCCTTGCTGAACAGCTCCCCGGGACCCCCCACGCGCAAGCTCCTTGCTCAGGACCTGGCCATCCTTTATAGTGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 90 bp TCCGGATGGCAAAGGGCTGGCAGTAAGCACGTCGATGCTGCTGCTTaGGTATCAGGGGCCGTCAGCTCGGCAGCCAGCTCTTTGAGGATA +
Preference number: 5 (lower is better)
Translates to: SGWQRAGSKHVDAAA*VSGAVSSAASSLRI
Trigger: TATCCTCAAAGAGCTGGCTGCCGAGCTGACGGCCCCTGATACCCAAGCAGCAGCATCGACGTGCTTACTGCCAGCCCTTTGCCATCCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 90 bp CAGGTAGGACGGCAAGGCCACCGCAATGCAGTGCAAGCACCAGGCTaGAGCCAGTCGAACAGAAATGCTAGGGTGCAGAACCACCGAGAT +
Preference number: 5 (lower is better)
Translates to: QVGRQGHRNAVQAPG*SQSNRNARVQNHRD
Trigger: ATCTCGGTGGTTCTGCACCCTAGCATTTCTGTTCGACTGGCTGCAGCCTGGTGCTTGCACTGCATTGCGGTGGCCTTGCCGTCCTACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 90 bp GGCTCCAGCAGTCAAGCACAGTTGCTAATGCACTTTGGAGGAGGCTaGTCCAAGCTTCGTGGCTCTTTTCTGCCCGGGCCATGGGGGAAG +
Preference number: 5 (lower is better)
Translates to: GSSSQAQLLMHFGGG*SKLRGSFLPGPWGK
Trigger: CTTCCCCCATGGCCCGGGCAGAAAAGAGCCACGAAGCTTGGACCAGCCTCCTCCAAAGTGCATTAGCAACTGTGCTTGACTGCTGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 90 bp CCGTCAACTGGGCTCCAGCAGTCAAGCACAGTTGCTAATGCACTTTaGAGGAGGCTGGTCCAAGCTTCGTGGCTCTTTTCTGCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: PSTGLQQSSTVANAL*RRLVQASWLFSARA
Trigger: GGCCCGGGCAGAAAAGAGCCACGAAGCTTGGACCAGCCTCCTCCAAAGTGCATTAGCAACTGTGCTTGACTGCTGGAGCCCAGTTGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS TCA 90 bp AGCCGCCACCAGTCTACTTCCCTCCTCCAACAGGGTCTTCGGCTTTaGAGCCTTTCCTCCTGGGCTACCTGCCAGCTTAGGGTTCAGTTC +
Preference number: 5 (lower is better)
Translates to: SRHQSTSLLQQGLRL*SLSSWATCQLRVQF
Trigger: GAACTGAACCCTAAGCTGGCAGGTAGCCCAGGAGGAAAGGCTTCAAAGCCGAAGACCCTGTTGGAGGAGGGAAGTAGACTGGTGGCGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 90 bp CAGTGCAAGCACCAGGCTGCAGCCAGTCGAACAGAAATGCTAGGGTaGAGAACCACCGAGATGACGCTGTCCAGAAGGCCTGTGCTGGAA +
Preference number: 5 (lower is better)
Translates to: QCKHQAAASRTEMLG*RTTEMTLSRRPVLE
Trigger: TTCCAGCACAGGCCTTCTGGACAGCGTCATCTCGGTGGTTCTGCACCCTAGCATTTCTGTTCGACTGGCTGCAGCCTGGTGCTTGCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS TCA 90 bp CATGAGAGCAGCAACCAACAGCCATCCCGCTTGTGTGCGCTGAAGTaGCAGGCGGCTGTTTTGAGCAGCGGAACACAGCAAATCCTCTGC +
Preference number: 5 (lower is better)
Translates to: HESSNQQPSRLCALK*QAAVLSSGTQQILC
Trigger: GCAGAGGATTTGCTGTGTTCCGCTGCTCAAAACAGCCGCCTGTCACTTCAGCGCACACAAGCGGGATGGCTGTTGGTTGCTGCTCTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS TCA 90 bp GCTGGAAAGACACACTTCCACAGCAGCAGAACTCGAGTGAGGTGGTaGCTGACCACGGCAGGACCTAGCGTCATGAGAGCAGCAACCAAC +
Preference number: 5 (lower is better)
Translates to: AGKTHFHSSRTRVRW*LTTAGPSVMRAATN
Trigger: GTTGGTTGCTGCTCTCATGACGCTAGGTCCTGCCGTGGTCAGTCACCACCTCACTCGAGTTCTGCTGCTGTGGAAGTGTGTCTTTCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS TCA 90 bp GCCAAGGAACATCGAGCAGGGCCTGCAGTGCACGCAGACAAGCCATaGTGCTTTCCAAGCTTGCATCTGAGCGCAGGGAACACAGGAACT +
Preference number: 5 (lower is better)
Translates to: AKEHRAGPAVHADKP*CFPSLHLSAGNTGT
Trigger: AGTTCCTGTGTTCCCTGCGCTCAGATGCAAGCTTGGAAAGCATCATGGCTTGTCTGCGTGCACTGCAGGCCCTGCTCGATGTTCCTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS TCA 90 bp TCCAAAAGGAAGGAGATGAGGATGGGCAGAAGGCAGGCCACCAGCTaGGCGCGGTGCTCTTCTTCCGCAATGGCGACCAAAGCTTCTAAG +
Preference number: 5 (lower is better)
Translates to: SKRKEMRMGRRQATS*ARCSSSAMATKASK
Trigger: CTTAGAAGCTTTGGTCGCCATTGCGGAAGAAGAGCACCGCGCTCAGCTGGTGGCCTGCCTTCTGCCCATCCTCATCTCCTTCCTTTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS TCA 90 bp AGGTTCTTGGCATGCTTAGAAGGCGGATCCACTCGGACACTTTCCTaGTTGCCTTTTACAGCAGCCTCCAGCCGGGCTTTCAGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: RFLACLEGGSTRTLS*LPFTAASSRAFRAG
Trigger: CCCAGCCCTGAAAGCCCGGCTGGAGGCTGCTGTAAAAGGCAATCAGGAAAGTGTCCGAGTGGATCCGCCTTCTAAGCATGCCAAGAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 90 bp CGGGGGACTTCACGGCAGCTCCTGATGATGATGAGCCCTGGCACATaGATGTTGGAGTTACAGGCCTTGAGAGATTGGCACCGCCTTCAT +
Preference number: 5 (lower is better)
Translates to: RGTSRQLLMMMSPGT*MLELQALRDWHRLH
Trigger: ATGAAGGCGGTGCCAATCTCTCAAGGCCTGTAACTCCAACATCCATGTGCCAGGGCTCATCATCATCAGGAGCTGCCGTGAAGTCCCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 90 bp ATTCCTTTCAGAGTCTGCAGGGAAGCCGTGACTGTGCAGGATAACTaGCCCCCAGGTAACTTCACAGCCGTTTCCCGGAGGACTCCGATG +
Preference number: 5 (lower is better)
Translates to: IPFRVCREAVTVQDN*PPGNFTAVSRRTPM
Trigger: CATCGGAGTCCTCCGGGAAACGGCTGTGAAGTTACCTGGGGGCCAGTTATCCTGCACAGTCACGGCTTCCCTGCAGACTCTGAAAGGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS TCA 90 bp CTCCACATGCACGTGATAGAGTGCACCCGCAGAATCAATGGTCAGTaGCAAGGAGTGGAGTGCCCAGGTCTGCACGTCAGGAGAAGTGCT +
Preference number: 5 (lower is better)
Translates to: LHMHVIECTRRINGQ*QGVECPGLHVRRSA
Trigger: AGCACTTCTCCTGACGTGCAGACCTGGGCACTCCACTCCTTGTCACTGACCATTGATTCTGCGGGTGCACTCTATCACGTGCATGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040583.7
ENSMUST00000217966.2
CDS GCA 90 bp GGGGAGCTGTTCAGCAAGGACAGGAGCTGCCCAACAAGAGTCTTCTaGTTCTCCCTGACGTCCTCCCTGTTTGTTGCTAGCAAGAGCTTC +
Preference number: 5 (lower is better)
Translates to: GELFSKDRSCPTRVF*FSLTSSLFVASKSF
Trigger: GAAGCTCTTGCTAGCAACAAACAGGGAGGACGTCAGGGAGAAGCAGAAGACTCTTGTTGGGCAGCTCCTGTCCTTGCTGAACAGCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 90 bp TTTAGCCTCCAGACTGCCTGGCAGATCTCCTTTGCAGCAGCTATCTaGGCCTTCTCTCCAAGCAGGCCTCCTAGAGTCGCTCGAAGAATG +
Preference number: 5 (lower is better)
Translates to: FSLQTAWQISFAAAI*AFSPSRPPRVARRM
Trigger: CATTCTTCGAGCGACTCTAGGAGGCCTGCTTGGAGAGAAGGCGCAGATAGCTGCTGCAAAGGAGATCTGCCAGGCAGTCTGGAGGCTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 90 bp GGCAGGAGTCGCTGGATGACTTCCTCAGTAAGGAGATCACCACAGTaGGAAATGAAACTCTTGACAGCACAGAGAGCACCGGCTCGGCCT +
Preference number: 5 (lower is better)
Translates to: GRSRWMTSSVRRSPQ*EMKLLTAQRAPARP
Trigger: AGGCCGAGCCGGTGCTCTCTGTGCTGTCAAGAGTTTCATTTCGCACTGTGGTGATCTCCTTACTGAGGAAGTCATCCAGCGACTCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 90 bp TCACTGCCAATTCTCCACCTGGGCCAAGGAACATCGAGCAGGGCCTaGAGTGCACGCAGACAAGCCATGATGCTTTCCAAGCTTGCATCT +
Preference number: 5 (lower is better)
Translates to: SLPILHLGQGTSSRA*SARRQAMMLSKLAS
Trigger: AGATGCAAGCTTGGAAAGCATCATGGCTTGTCTGCGTGCACTGCAGGCCCTGCTCGATGTTCCTTGGCCCAGGTGGAGAATTGGCAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 90 bp CTCTTGACAGCACAGAGAGCACCGGCTCGGCCTTCCAGGGTCACTTaGCAGGTAAACGAGTCTCCTCGGCTCTTTTCTGTTTCTAGATCT +
Preference number: 5 (lower is better)
Translates to: LLTAQRAPARPSRVT*QVNESPRLFSVSRS
Trigger: AGATCTAGAAACAGAAAAGAGCCGAGGAGACTCGTTTACCTGGCAAGTGACCCTGGAAGGCCGAGCCGGTGCTCTCTGTGCTGTCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 90 bp GGGTATAAAGGACTCCAATGCAAGAACTCAAGTGCTGAGGCCCTATaGCCCCTAAGTACCTATGCAGGGATCCCAGAGCCAGTGAGTGGC +
Preference number: 5 (lower is better)
Translates to: GYKGLQCKNSSAEAL*PLSTYAGIPEPVSG
Trigger: GCCACTCACTGGCTCTGGGATCCCTGCATAGGTACTTAGGGGGCATAGGGCCTCAGCACTTGAGTTCTTGCATTGGAGTCCTTTATACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040583.7
ENSMUST00000217966.2
CDS CCA 90 bp TCTGGAGTTCAAGAAGACACTTGGCAGCAGCACATCGGACAGCCATaGATCTGTCTGTTAAGCAGGACCGGGCAGCCTTGTAAACGTCCC +
Preference number: 5 (lower is better)
Translates to: SGVQEDTWQQHIGQP*ICLLSRTGQPCKRP
Trigger: GGGACGTTTACAAGGCTGCCCGGTCCTGCTTAACAGACAGATCCATGGCTGTCCGATGTGCTGCTGCCAAGTGTCTTCTTGAACTCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 90 bp AGAACCACCGAGATGACGCTGTCCAGAAGGCCTGTGCTGGAATCCTaGAGCAAAGGCGCAGCTGTAGTGCCAAGGTTGTGGATCAGATTT +
Preference number: 5 (lower is better)
Translates to: RTTEMTLSRRPVLES*SKGAAVVPRLWIRF
Trigger: AAATCTGATCCACAACCTTGGCACTACAGCTGCGCCTTTGCTCCAGGATTCCAGCACAGGCCTTCTGGACAGCGTCATCTCGGTGGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 90 bp GACAACCCCAAAGAGCTTGGATGCAGAGCTAATCACAGACAGTGCTaGAGGCAGGGGCTTAGGCACAGAGTCTCCTTCTACGTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: DNPKELGCRANHRQC*RQGLRHRVSFYVLL
Trigger: GAGAAGGACGTAGAAGGAGACTCTGTGCCTAAGCCCCTGCCTCCAGCACTGTCTGTGATTAGCTCTGCATCCAAGCTCTTTGGGGTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS TCA 90 bp CCATGGGGGAAGTTAAGATTCCTTTCAGAGTCTGCAGGGAAGCCGTaGCTGTGCAGGATAACTGGCCCCCAGGTAACTTCACAGCCGTTT +
Preference number: 5 (lower is better)
Translates to: PWGKLRFLSESAGKP*LCRITGPQVTSQPF
Trigger: AAACGGCTGTGAAGTTACCTGGGGGCCAGTTATCCTGCACAGTCACGGCTTCCCTGCAGACTCTGAAAGGAATCTTAACTTCCCCCATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 90 bp CTGGTCAAAACCGAGGCATCGTCACCTCTGTCGCCTTCTTCCTCCTaGATTGTATCCACGCAAGTTACAGCTGTAAAGTCAGCGGATGCG +
Preference number: 5 (lower is better)
Translates to: LVKTEASSPLSPSSS*IVSTQVTAVKSADA
Trigger: CGCATCCGCTGACTTTACAGCTGTAACTTGCGTGGATACAATGCAGGAGGAAGAAGGCGACAGAGGTGACGATGCCTCGGTTTTGACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 90 bp GCCACACTGTCCACGTCTGTGCTCCACATAAAGATGGCCTCATTCTaGAGTTCAAGAAGACACTTGGCAGCAGCACATCGGACAGCCATG +
Preference number: 5 (lower is better)
Translates to: ATLSTSVLHIKMASF*SSRRHLAAAHRTAM
Trigger: CATGGCTGTCCGATGTGCTGCTGCCAAGTGTCTTCTTGAACTCCAGAATGAGGCCATCTTTATGTGGAGCACAGACGTGGACAGTGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 90 bp TCGGTCTCCTGCAGCAAAGGACTTAATATCAAGAGGTCATCCGGATaGCAAAGGGCTGGCAGTAAGCACGTCGATGCTGCTGCTTGGGTA +
Preference number: 5 (lower is better)
Translates to: SVSCSKGLNIKRSSG*QRAGSKHVDAAAWV
Trigger: TACCCAAGCAGCAGCATCGACGTGCTTACTGCCAGCCCTTTGCCATCCGGATGACCTCTTGATATTAAGTCCTTTGCTGCAGGAGACCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 90 bp CCTATGCCCCCTAAGTACCTATGCAGGGATCCCAGAGCCAGTGAGTaGCCTGTTCTGGTAACCACATCTCTCGCTGACTTCAATTTGTCG +
Preference number: 5 (lower is better)
Translates to: PMPPKYLCRDPRASE*PVLVTTSLADFNLS
Trigger: CGACAAATTGAAGTCAGCGAGAGATGTGGTTACCAGAACAGGCCACTCACTGGCTCTGGGATCCCTGCATAGGTACTTAGGGGGCATAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 90 bp AGCAGCAAAGACTCTAGTGGCCCATCGAGGATTACTGAAAGGGTGTaGCTTGTCATCCCCTCTGGTCAAAACCGAGGCATCGTCACCTCT +
Preference number: 5 (lower is better)
Translates to: SSKDSSGPSRITERV*LVIPSGQNRGIVTS
Trigger: AGAGGTGACGATGCCTCGGTTTTGACCAGAGGGGATGACAAGCCACACCCTTTCAGTAATCCTCGATGGGCCACTAGAGTCTTTGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 90 bp AGCACAGTTGCTAATGCACTTTGGAGGAGGCTGGTCCAAGCTTCGTaGCTCTTTTCTGCCCGGGCCATGGGGGAAGTTAAGATTCCTTTC +
Preference number: 5 (lower is better)
Translates to: STVANALWRRLVQAS*LFSARAMGEVKIPF
Trigger: GAAAGGAATCTTAACTTCCCCCATGGCCCGGGCAGAAAAGAGCCACGAAGCTTGGACCAGCCTCCTCCAAAGTGCATTAGCAACTGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 90 bp TTCCTGATTGCCTTTTACAGCAGCCTCCAGCCGGGCTTTCAGGGCTaGGGAAGAAGCCATGACTCTTTTAAACACAGACGAGTACCGAGG +
Preference number: 5 (lower is better)
Translates to: FLIAFYSSLQPGFQG*GRSHDSFKHRRVPR
Trigger: CCTCGGTACTCGTCTGTGTTTAAAAGAGTCATGGCTTCTTCCCCAGCCCTGAAAGCCCGGCTGGAGGCTGCTGTAAAAGGCAATCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 90 bp TCAGTGACAAGGAGTGGAGTGCCCAGGTCTGCACGTCAGGAGAAGTaGTGTCCTGAGACAGGGTATAAAGGACTCCAATGCAAGAACTCA +
Preference number: 5 (lower is better)
Translates to: SVTRSGVPRSARQEK*CPETGYKGLQCKNS
Trigger: TGAGTTCTTGCATTGGAGTCCTTTATACCCTGTCTCAGGACAGCACTTCTCCTGACGTGCAGACCTGGGCACTCCACTCCTTGTCACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040583.7
ENSMUST00000217966.2
CDS GCA 90 bp CTGATGAACTCTGCGGAGATCGCTGAGGTCACTAACAACCCCACTTaGTATCCAAGCACTGCAAACCTGACATGCTTTGGCGGTGATGTC +
Preference number: 5 (lower is better)
Translates to: LMNSAEIAEVTNNPT*YPSTANLTCFGGDV
Trigger: GACATCACCGCCAAAGCATGTCAGGTTTGCAGTGCTTGGATAGCAAGTGGGGTTGTTAGTGACCTCAGCGATCTCCGCAGAGTTCATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 90 bp TCACTCAATGCGGCATCCATAACTTTCTTTAGCCTCCAGACTGCCTaGCAGATCTCCTTTGCAGCAGCTATCTGCGCCTTCTCTCCAAGC +
Preference number: 5 (lower is better)
Translates to: SLNAASITFFSLQTA*QISFAAAICAFSPS
Trigger: GCTTGGAGAGAAGGCGCAGATAGCTGCTGCAAAGGAGATCTGCCAGGCAGTCTGGAGGCTAAAGAAAGTTATGGATGCCGCATTGAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CAA 90 bp CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGGCGGACACGGAAGTATaGCTACCTTGTAGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: LKRQNHETTASSHTVGLKADTEV*LPCSSG
Trigger: CCCAGAGCTACAAGGTAGCAATACTTCCGTGTCCGC...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS TCA 90 bp TTTCCAAGCTTGCATCTGAGCGCAGGGAACACAGGAACTCCACGCTaGTTCCTAGAATCAGATGGAACCTGTCAGTGTAGACATCCTCGG +
Preference number: 5 (lower is better)
Translates to: FPSLHLSAGNTGTPR*FLESDGTCQCRHPR
Trigger: CCGAGGATGTCTACACTGACAGGTTCCATCTGATTCTAGGAATCAGCGTGGAGTTCCTGTGTTCCCTGCGCTCAGATGCAAGCTTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 90 bp CGAAGAATGAATGAGACACAGCGGCGACAGCAGACGGCGTCAATCTaGGTCTGTGTGGCTTTAGGATTTGACTGTGATACAAGGCTTAGG +
Preference number: 5 (lower is better)
Translates to: RRMNETQRRQQTASI*VCVALGFDCDTRLR
Trigger: CCTAAGCCTTGTATCACAGTCAAATCCTAAAGCCACACAGACGCAGATTGACGCCGTCTGCTGTCGCCGCTGTGTCTCATTCATTCTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 90 bp TTGTGGATCAGATTTCCAAGTTCTTGTAAAGCACAAACCAGCACATaGTGGCTGGCGGCTACATCCGTGGAACTGAGACGGGTCTCCACA +
Preference number: 5 (lower is better)
Translates to: LWIRFPSSCKAQTST*WLAATSVELRRVST
Trigger: TGTGGAGACCCGTCTCAGTTCCACGGATGTAGCCGCCAGCCAGCATGTGCTGGTTTGTGCTTTACAAGAACTTGGAAATCTGATCCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 90 bp CGTCAGGAGAAGTGCTGTCCTGAGACAGGGTATAAAGGACTCCAATaGAAGAACTCAAGTGCTGAGGCCCTATGCCCCCTAAGTACCTAT +
Preference number: 5 (lower is better)
Translates to: RQEKCCPETGYKGLQ*KNSSAEALCPLSTY
Trigger: ATAGGTACTTAGGGGGCATAGGGCCTCAGCACTTGAGTTCTTGCATTGGAGTCCTTTATACCCTGTCTCAGGACAGCACTTCTCCTGACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040583.7
ENSMUST00000217966.2
CDS CCA 90 bp AGAGAGCAAAATCCTGAAGTGCAGCAAGCCAGAGTTTGCTTAGCGTaGCCAGGTCAGTGCAGACTAAGTCAAGAAGACCAGCAGCTGAAG +
Preference number: 5 (lower is better)
Translates to: REQNPEVQQARVCLA*PGQCRLSQEDQQLK
Trigger: CTTCAGCTGCTGGTCTTCTTGACTTAGTCTGCACTGACCTGGCCACGCTAAGCAAACTCTGGCTTGCTGCACTTCAGGATTTTGCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CAA 90 bp TTGATACGACCACTGAATAAGGCAGGAGTCCATGTAGAAAGTGGGATGTGGTGTCCACAGGCAACACCATaGCCAAGCAGGAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: LIRPLNKAGVHVESGMWCPQATP*PSRSCS
Trigger: AGAGCAGCTCCTGCTTGGCAATGGTGTTGCCTGTGG...ACACCACATCCCACTTTCTACATGGACTCCTGCCTTATTCAGTGGTCGTATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS TCA 90 bp TACCACGTAAGCCTGAGTAACTCCGACTCGAACGTCTCTGCTGACTaGACTGTTTCCTTTCAGCATATCTCCACTGGCTCGAAGGAATCC +
Preference number: 5 (lower is better)
Translates to: YHVSLSNSDSNVSAD*TVSFQHISTGSKES
Trigger: GGATTCCTTCGAGCCAGTGGAGATATGCTGAAAGGAAACAGTTCAGTCAGCAGAGACGTTCGAGTCGGAGTTACTCAGGCTTACGTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 90 bp GAGTACCGAGGCCCAATCTGCATGAGACTGTGCAAAGCAAAGTCGTaGAGACTTCTCGTTACTGAAGTTGCTGATCCCAGAGCATTCTCA +
Preference number: 5 (lower is better)
Translates to: EYRGPICMRLCKAKS*RLLVTEVADPRAFS
Trigger: TGAGAATGCTCTGGGATCAGCAACTTCAGTAACGAGAAGTCTGCACGACTTTGCTTTGCACAGTCTCATGCAGATTGGGCCTCGGTACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 90 bp TGGATCAGATTTCCAAGTTCTTGTAAAGCACAAACCAGCACATGCTaGCTGGCGGCTACATCCGTGGAACTGAGACGGGTCTCCACATTA +
Preference number: 5 (lower is better)
Translates to: WIRFPSSCKAQTSTC*LAATSVELRRVSTL
Trigger: TAATGTGGAGACCCGTCTCAGTTCCACGGATGTAGCCGCCAGCCAGCATGTGCTGGTTTGTGCTTTACAAGAACTTGGAAATCTGATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 90 bp GTGCTGGAATCCTGGAGCAAAGGCGCAGCTGTAGTGCCAAGGTTGTaGATCAGATTTCCAAGTTCTTGTAAAGCACAAACCAGCACATGC +
Preference number: 5 (lower is better)
Translates to: VLESWSKGAAVVPRL*IRFPSSCKAQTSTC
Trigger: GCATGTGCTGGTTTGTGCTTTACAAGAACTTGGAAATCTGATCCACAACCTTGGCACTACAGCTGCGCCTTTGCTCCAGGATTCCAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CAA 90 bp CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGATGCAACTGAACGGTTaGCTGACGAGCTCCTTTGGT +
Preference number: 5 (lower is better)
Translates to: LKRQNHETTASSHTVGLKMQLNG*LTSSFG
Trigger: ACCAAAGGAGCTCGTCAGCAAACCGTTCAGTTGCAT...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS TCA 90 bp TGGGCGGCACAGATAATCTGCCTGACCACTTCAAGTGAAGCCAGTTaGATGGCTGGTGACTCTCTGGTCAAAATTACTCGGTGTAGTACA +
Preference number: 5 (lower is better)
Translates to: WAAQIICLTTSSEAS*MAGDSLVKITRCST
Trigger: TGTACTACACCGAGTAATTTTGACCAGAGAGTCACCAGCCATTCAACTGGCTTCACTTGAAGTGGTCAGGCAGATTATCTGTGCCGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 90 bp TCCAGTGACACTCTACGAGCACTCTGCTTTGAGCCTGCTCCTGGATaGTTAGCAGTTACAGCTTTAGCCAACACTGTACCCAACAGTTTT +
Preference number: 5 (lower is better)
Translates to: SSDTLRALCFEPAPG*LAVTALANTVPNSF
Trigger: AAAACTGTTGGGTACAGTGTTGGCTAAAGCTGTAACTGCTAAGCATCCAGGAGCAGGCTCAAAGCAGAGTGCTCGTAGAGTGTCACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 90 bp TTGCCAAGCAGGAGCTGCTCTTCAATAAACCTATGGTCGGTCTCCTaGAGCAAAGGACTTAATATCAAGAGGTCATCCGGATGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: LPSRSCSSINLWSVS*SKGLNIKRSSGWQR
Trigger: CCTTTGCCATCCGGATGACCTCTTGATATTAAGTCCTTTGCTGCAGGAGACCGACCATAGGTTTATTGAAGAGCAGCTCCTGCTTGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 90 bp GCAAAGTTAAGAGAGCAAAATCCTGAAGTGCAGCAAGCCAGAGTTTaGTTAGCGTGGCCAGGTCAGTGCAGACTAAGTCAAGAAGACCAG +
Preference number: 5 (lower is better)
Translates to: AKLREQNPEVQQARV*LAWPGQCRLSQEDQ
Trigger: CTGGTCTTCTTGACTTAGTCTGCACTGACCTGGCCACGCTAAGCAAACTCTGGCTTGCTGCACTTCAGGATTTTGCTCTCTTAACTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CAA 90 bp CAGTTAGAGGACATACAGACTGTTAGAGGACATCCCTTCATTTTCAAAGCAGTGCCTGGCAGATCTCCTTaGCAGCAGCTATCTGCGCCT +
Preference number: 5 (lower is better)
Translates to: QLEDIQTVRGHPFIFKAVPGRSP*QQLSAP
Trigger: AGGCGCAGATAGCTGCTGCAAAGGAGATCTGCCAGG...CACTGCTTTGAAAATGAAGGGATGTCCTCTAACAGTCTGTATGTCCTCTAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CAA 90 bp TTGATACGACCACTGAATAAGGCAGGAGTCCATGTAGAAAGTGGGATGTGGTGTTCGGCAGCCAGCTCTTaGAGGATAACACAGAGGTTC +
Preference number: 5 (lower is better)
Translates to: LIRPLNKAGVHVESGMWCSAASS*RITQRF
Trigger: GAACCTCTGTGTTATCCTCAAAGAGCTGGCTGCCGA...ACACCACATCCCACTTTCTACATGGACTCCTGCCTTATTCAGTGGTCGTATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CAA 90 bp TTGATACGACCACTGAATAAGGCAGGAGTCCATGTAGAAAGTGGGATGTGGTGTACCAGACTAGACAAGTaGACATGGCGTGGGGCAAAC +
Preference number: 5 (lower is better)
Translates to: LIRPLNKAGVHVESGMWCTRLDK*TWRGAN
Trigger: GTTTGCCCCACGCCATGTCAACTTGTCTAGTCTGGT...ACACCACATCCCACTTTCTACATGGACTCCTGCCTTATTCAGTGGTCGTATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CAA 90 bp GAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGCTACACCTTTGGAGTTACAGGCCTaGAGAGATTGGCACCGCCTT +
Preference number: 5 (lower is better)
Translates to: ESTTCSWSNQFFSILATPLELQA*RDWHRL
Trigger: AAGGCGGTGCCAATCTCTCAAGGCCTGTAACTCCAA...AGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CAA 90 bp CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTCACAGAGTTCCAGGGTaGCAAAGACCAAAGACTTCC +
Preference number: 5 (lower is better)
Translates to: LKPHSGAEAVSPVISWVIHRVPG*QRPKTS
Trigger: GGAAGTCTTTGGTCTTTGCAACCCTGGAACTCTGTG...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 90 bp CATGCAACTGAACGGTTTGCTGACGAGCTCCTTTGGTGTGCTTTATaGTGTTCAAAAGCTGCTCCAGTATCAGAACCCTCTGAGCTTCAT +
Preference number: 5 (lower is better)
Translates to: HATERFADELLWCAL*CSKAAPVSEPSELH
Trigger: ATGAAGCTCAGAGGGTTCTGATACTGGAGCAGCTTTTGAACAGCATAAAGCACACCAAAGGAGCTCGTCAGCAAACCGTTCAGTTGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CAA 90 bp TTGATACGACCACTGAATAAGGCAGGAGTCCATGTAGAAAGTGGGATGTGGTGTTGGTGGGAAGGTAACTaGGAGAGTCATCTTTGCTCC +
Preference number: 5 (lower is better)
Translates to: LIRPLNKAGVHVESGMWCWWEGN*ESHLCS
Trigger: GGAGCAAAGATGACTCTCCAAGTTACCTTCCCACCA...ACACCACATCCCACTTTCTACATGGACTCCTGCCTTATTCAGTGGTCGTATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CAA 90 bp CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTGCTGTAGTGCCAAGGTaGTGGATCAGATTTCCAAGT +
Preference number: 5 (lower is better)
Translates to: LKPHSGAEAVSPVISWVIAVVPR*WIRFPS
Trigger: ACTTGGAAATCTGATCCACAACCTTGGCACTACAGC...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CAA 90 bp CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTGAACTTGCGCATGAGTaGGAGGCACATTTAGCAACA +
Preference number: 5 (lower is better)
Translates to: LKPHSGAEAVSPVISWVIELAHE*EAHLAT
Trigger: TGTTGCTAAATGTGCCTCCAACTCATGCGCAAGTTC...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CAA 90 bp CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTGGCTCCAACATTGGCTaGATACTGTTCCAGAATCAC +
Preference number: 5 (lower is better)
Translates to: LKPHSGAEAVSPVISWVIGSNIG*ILFQNH
Trigger: GTGATTCTGGAACAGTATCAAGCCAATGTTGGAGCC...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CAA 90 bp ATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGACAGGGTCTTCGGCTTaGAAGCCTTTCCTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: IKQSPPRALGLISFSQFWTGSSA*KPFLLG
Trigger: GCCCAGGAGGAAAGGCTTCAAAGCCGAAGACCCTGT...CCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTCTGTTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 90 bp AACACTAGGGTTAGGACGAGTCTTCTCACCTCTGGACCTAAGCTTTaGTTAGAGCCAGCCACATACTTCAGTAAGTTGGAAATGGCAGAA +
Preference number: 5 (lower is better)
Translates to: NTRVRTSLLTSGPKL*LEPATYFSKLEMAE
Trigger: TTCTGCCATTTCCAACTTACTGAAGTATGTGGCTGGCTCTAAGCAAAGCTTAGGTCCAGAGGTGAGAAGACTCGTCCTAACCCTAGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 90 bp CTTTTAAACACAGACGAGTACCGAGGCCCAATCTGCATGAGACTGTaGAAAGCAAAGTCGTGCAGACTTCTCGTTACTGAAGTTGCTGAT +
Preference number: 5 (lower is better)
Translates to: LLNTDEYRGPICMRL*KAKSCRLLVTEVAD
Trigger: ATCAGCAACTTCAGTAACGAGAAGTCTGCACGACTTTGCTTTGCACAGTCTCATGCAGATTGGGCCTCGGTACTCGTCTGTGTTTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CAA 90 bp CAGTTAGAGGACATACAGACTGTTAGAGGACATCCCTTCATTTTCAAAGCAGTGCCTGGCACATGGATGTaGGAGTTACAGGCCTTGAGA +
Preference number: 5 (lower is better)
Translates to: QLEDIQTVRGHPFIFKAVPGTWM*ELQALR
Trigger: TCTCAAGGCCTGTAACTCCAACATCCATGTGCCAGG...CACTGCTTTGAAAATGAAGGGATGTCCTCTAACAGTCTGTATGTCCTCTAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CAA 90 bp CTTAAAAGACAGAATCATGAGACCACAGCCTCAAGCCACACAGTGGGGCTGAAGCTTGGAGAGTCATCTTaGCTCCGAATAAGATCATTA +
Preference number: 5 (lower is better)
Translates to: LKRQNHETTASSHTVGLKLGESS*LRIRSL
Trigger: TAATGATCTTATTCGGAGCAAAGATGACTCTCCAAG...CTTCAGCCCCACTGTGTGGCTTGAGGCTGTGGTCTCATGATTCTGTCTTTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CAA 90 bp CAGTTAGAGGACATACAGACTGTTAGAGGACATCCCTTCATTTTCAAAGCAGTGGCTTCTGGTGAAGACTaGAGTATTGCGAGCCGTTCT +
Preference number: 5 (lower is better)
Translates to: QLEDIQTVRGHPFIFKAVASGED*SIASRS
Trigger: AGAACGGCTCGCAATACTCAAGTCTTCACCAGAAGC...CACTGCTTTGAAAATGAAGGGATGTCCTCTAACAGTCTGTATGTCCTCTAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CAA 90 bp AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTGCCTTCCAGGGTCACTaGCCAGGTAAACGAGTCTCC +
Preference number: 5 (lower is better)
Translates to: RVFTYKHNKTESTTCSWSAFQGH*PGKRVS
Trigger: GGAGACTCGTTTACCTGGCAAGTGACCCTGGAAGGC...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 90 bp GGAACCCAAGCACACCACAGCAGCAAGTTTGGTGGGAAGGTAACTTaGAGAGTCATCTTTGCTCCGAATAAGATCATTACATTTATCGAT +
Preference number: 5 (lower is better)
Translates to: GTQAHHSSKFGGKVT*RVIFAPNKIITFID
Trigger: ATCGATAAATGTAATGATCTTATTCGGAGCAAAGATGACTCTCCAAGTTACCTTCCCACCAAACTTGCTGCTGTGGTGTGCTTGGGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CAA 90 bp AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTTACGAGCACTCTGCTTaGAGCCTGCTCCTGGATGCT +
Preference number: 5 (lower is better)
Translates to: RVFTYKHNKTESTTCSWSYEHSA*SLLLDA
Trigger: AGCATCCAGGAGCAGGCTCAAAGCAGAGTGCTCGTA...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CAA 90 bp AAATGGAAACAAAATAAAACCAGAATTACCAAGAACGTTAAGTTTCGGTCCCTCGCAGCAAGCCAGAGTTaGCTTAGCGTGGCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: KWKQNKTRITKNVKFRSLAASQS*LSVARS
Trigger: TGACCTGGCCACGCTAAGCAAACTCTGGCTTGCTGC...GAGGGACCGAAACTTAACGTTCTTGGTAATTCTGGTTTTATTTTGTTTCCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CAA 90 bp GTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATTGCACCACAGAGTCCTaGCTCTCCAGGGCAGCCTTA +
Preference number: 5 (lower is better)
Translates to: VFTYKHNKTESTTCSWSNCTTES*LSRAAL
Trigger: TAAGGCTGCCCTGGAGAGCAAGGACTCTGTGGTGCA...ATTAGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CAA 90 bp ATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATCAGTTTTTCTCAATTCTGGGAGCTTTATTCCTTCTaGACAGAGCTGCAGCTCGGT +
Preference number: 5 (lower is better)
Translates to: IKQSPPRALGLISFSQFWELYSF*TELQLG
Trigger: ACCGAGCTGCAGCTCTGTCAAGAAGGAATAAAGCTC...CCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGGTGGACTCTGTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CAA 90 bp AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTCGTCCTCCCTGTTTGTaGCTAGCAAGAGCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: RVFTYKHNKTESTTCSWSRPPCL*LARASP
Trigger: TGGAGAAGCTCTTGCTAGCAACAAACAGGGAGGACG...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CAA 90 bp CAGTTAGAGGACATACAGACTGTTAGAGGACATCCCTTCATTTTCAAAGCAGTGCTGTACCCAACAGTTTaGAAACTGATATCCGCACGT +
Preference number: 5 (lower is better)
Translates to: QLEDIQTVRGHPFIFKAVLYPTV*KLISAR
Trigger: ACGTGCGGATATCAGTTTCAAAACTGTTGGGTACAG...CACTGCTTTGAAAATGAAGGGATGTCCTCTAACAGTCTGTATGTCCTCTAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CAA 90 bp CTCAAGCCACACAGTGGGGCTGAAGCTGTCTCTCCTGTTATAAGTTGGGTAATTACATACTTCAGTAAGTaGGAAATGGCAGAAACAACA +
Preference number: 5 (lower is better)
Translates to: LKPHSGAEAVSPVISWVITYFSK*EMAETT
Trigger: TGTTGTTTCTGCCATTTCCAACTTACTGAAGTATGT...AATTACCCAACTTATAACAGGAGAGACAGCTTCAGCCCCACTGTGTGGCTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CAA 90 bp CAGTTAGAGGACATACAGACTGTTAGAGGACATCCCTTCATTTTCAAAGCAGTGTTCTCGTTACTGAAGTaGCTGATCCCAGAGCATTCT +
Preference number: 5 (lower is better)
Translates to: QLEDIQTVRGHPFIFKAVFSLLK*LIPEHS
Trigger: AGAATGCTCTGGGATCAGCAACTTCAGTAACGAGAA...CACTGCTTTGAAAATGAAGGGATGTCCTCTAACAGTCTGTATGTCCTCTAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CAA 90 bp AAATGGAAACAAAATAAAACCAGAATTACCAAGAACGTTAAGTTTCGGTCCCTCCTGAAAGGGTGTGGCTaGTCATCCCCTCTGGTCAAA +
Preference number: 5 (lower is better)
Translates to: KWKQNKTRITKNVKFRSLLKGCG*SSPLVK
Trigger: TTTGACCAGAGGGGATGACAAGCCACACCCTTTCAG...GAGGGACCGAAACTTAACGTTCTTGGTAATTCTGGTTTTATTTTGTTTCCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CAA 90 bp TTGATACGACCACTGAATAAGGCAGGAGTCCATGTAGAAAGTGGGATGTGGTGTAGTAGTCTTCAAGGCTaGCTTGTGATTTTTATGTCT +
Preference number: 5 (lower is better)
Translates to: LIRPLNKAGVHVESGMWCSSLQG*LVIFMS
Trigger: AGACATAAAAATCACAAGCAAGCCTTGAAGACTACT...ACACCACATCCCACTTTCTACATGGACTCCTGCCTTATTCAGTGGTCGTATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CAA 90 bp GTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATAGTTCAAGAAGACACTaGGCAGCAGCACATCGGACA +
Preference number: 5 (lower is better)
Translates to: VFTYKHNKTESTTCSWSNSSRRH*AAAHRT
Trigger: TGTCCGATGTGCTGCTGCCAAGTGTCTTCTTGAACT...ATTAGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CAA 90 bp AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTTTCCTTCACATGTTCTaGGGCGGCACAGATAATCTG +
Preference number: 5 (lower is better)
Translates to: RVFTYKHNKTESTTCSWSFLHMF*GGTDNL
Trigger: CAGATTATCTGTGCCGCCCAAGAACATGTGAAGGAA...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CAA 90 bp GTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATACAACCCCAAAGAGCTaGGATGCAGAGCTAATCACA +
Preference number: 5 (lower is better)
Translates to: VFTYKHNKTESTTCSWSNTTPKS*DAELIT
Trigger: TGTGATTAGCTCTGCATCCAAGCTCTTTGGGGTTGT...ATTAGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CAA 90 bp GTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTAATAGGAAACGGCCGGCTTaGGATACTGAAAAATGGAGT +
Preference number: 5 (lower is better)
Translates to: VFTYKHNKTESTTCSWSNRKRPA*DTEKWS
Trigger: ACTCCATTTTTCAGTATCCAAAGCCGGCCGTTTCCT...ATTAGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CAA 90 bp AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTATTCTACCCAATTTCTaGTACAAGGAACCCAAGCAC +
Preference number: 5 (lower is better)
Translates to: RVFTYKHNKTESTTCSWSILPNF*YKEPKH
Trigger: GTGCTTGGGTTCCTTGTACAAGAAATTGGGTAGAAT...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS-3UTR CAA 90 bp AGAGTATTTACATACAAACATAATAAAACAGAGTCCACCACGTGCTCTTGGTCTAAGCTCCTCCTAATGTaGAAACAAATACCACGTAAG +
Preference number: 5 (lower is better)
Translates to: RVFTYKHNKTESTTCSWSKLLLM*KQIPRK
Trigger: CTTACGTGGTATTTGTTTCAACATTAGGAGGAGCTT...AGACCAAGAGCACGTGGTGGACTCTGTTTTATTATGTTTGTATGTAAATACTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 72 bp GGACCGGGCAGCCTTGTAAACGTCCCTGTGGCACGGTaGAGCGGCAGCACCCAGCCCAGTCAGTATACTCTG +
Preference number: 6 (lower is better)
Translates to: GPGSLVNVPVAR*SGSTQPSQYTL
Trigger: CAGAGTATACTGACTGGGCTGGGTGCTGCCGCTGCACCGTGCCACAGGGACGTTTACAAGGCTGCCCGGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 72 bp CGCCCCTTCAAGGCCCACTTCTCTGAGGTTAGCATCTaGAGCGGCGTCCCTGCCATCCCTGGCCAGCATGAT +
Preference number: 6 (lower is better)
Translates to: RPFKAHFSEVSI*SGVPAIPGQHD
Trigger: ATCATGCTGGCCAGGGATGGCAGGGACGCCGCTGCAGATGCTAACCTCAGAGAAGTGGGCCTTGAAGGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040583.7
ENSMUST00000217966.2
CDS CCA 72 bp CAAAGGGCTGGCAGTAAGCACGTCGATGCTGCTGCTTaGGTATCAGGGGCCGTCAGCTCGGCAGCCAGCTCT +
Preference number: 6 (lower is better)
Translates to: QRAGSKHVDAAA*VSGAVSSAASS
Trigger: AGAGCTGGCTGCCGAGCTGACGGCCCCTGATACCCAAGCAGCAGCATCGACGTGCTTACTGCCAGCCCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 72 bp AAGGCAAGAGATGGCCTGAGCCTGGACCAGGCAGCCTaGGTGATCCTGCATCACTGCACAGCCCAGCAGACA +
Preference number: 6 (lower is better)
Translates to: KARDGLSLDQAA*VILHHCTAQQT
Trigger: TGTCTGCTGGGCTGTGCAGTGATGCAGGATCACCCAGGCTGCCTGGTCCAGGCTCAGGCCATCTCTTGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040583.7
ENSMUST00000217966.2
CDS TCA 72 bp AAGGAGATGAGGATGGGCAGAAGGCAGGCCACCAGCTaGGCGCGGTGCTCTTCTTCCGCAATGGCGACCAAA +
Preference number: 6 (lower is better)
Translates to: KEMRMGRRQATS*ARCSSSAMATK
Trigger: TTTGGTCGCCATTGCGGAAGAAGAGCACCGCGCTCAGCTGGTGGCCTGCCTTCTGCCCATCCTCATCTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 72 bp CGGCAAGGCCACCGCAATGCAGTGCAAGCACCAGGCTaGAGCCAGTCGAACAGAAATGCTAGGGTGCAGAAC +
Preference number: 6 (lower is better)
Translates to: RQGHRNAVQAPG*SQSNRNARVQN
Trigger: GTTCTGCACCCTAGCATTTCTGTTCGACTGGCTGCAGCCTGGTGCTTGCACTGCATTGCGGTGGCCTTGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 72 bp CCACCTGGGCCAAGGAACATCGAGCAGGGCCTGCAGTaGACGCAGACAAGCCATGATGCTTTCCAAGCTTGC +
Preference number: 6 (lower is better)
Translates to: PPGPRNIEQGLQ*TQTSHDAFQAC
Trigger: GCAAGCTTGGAAAGCATCATGGCTTGTCTGCGTGCACTGCAGGCCCTGCTCGATGTTCCTTGGCCCAGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 72 bp AGAGTCTGCAGGGAAGCCGTGACTGTGCAGGATAACTaGCCCCCAGGTAACTTCACAGCCGTTTCCCGGAGG +
Preference number: 6 (lower is better)
Translates to: RVCREAVTVQDN*PPGNFTAVSRR
Trigger: CCTCCGGGAAACGGCTGTGAAGTTACCTGGGGGCCAGTTATCCTGCACAGTCACGGCTTCCCTGCAGACTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CAA 90 bp GATGAGCCCTGGCACATGGATGTTGGAGTTACAGGCCTTGAGAGATaGGCACCGCCTTCATCTGGGTCAGCGAAGCCCGTGCTGGTGAGC +
Preference number: 6 (lower is better)
Translates to: DEPWHMDVGVTGLER*APPSSGSAKPVLVS
Trigger: GCTCACCAGCACGGGCTTCGCTGACCCAGATGAAGGCGGTGCCAATCTCTCAAGGCCTGTAACTCCAACATCCATGTGCCAGGGCTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS TCA 72 bp CCAGCACATGCTGGCTGGCGGCTACATCCGTGGAACTaGGACGGGTCTCCACATTACCATCACTCAATGCGG +
Preference number: 6 (lower is better)
Translates to: PAHAGWRLHPWN*DGSPHYHHSMR
Trigger: CCGCATTGAGTGATGGTAATGTGGAGACCCGTCTCAGTTCCACGGATGTAGCCGCCAGCCAGCATGTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS TCA 72 bp CATCTGCAGCGGCGTCCCTGCCATCCCTGGCCAGCATaGTGGCATGCTCTGAAACTTCAGCTGCTTCTCTCT +
Preference number: 6 (lower is better)
Translates to: HLQRRPCHPWPA*WHALKLQLLLS
Trigger: AGAGAGAAGCAGCTGAAGTTTCAGAGCATGCCATCATGCTGGCCAGGGATGGCAGGGACGCCGCTGCAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040583.7
ENSMUST00000217966.2
CDS TCA 72 bp CATCGAGCAGGGCCTGCAGTGCACGCAGACAAGCCATaGTGCTTTCCAAGCTTGCATCTGAGCGCAGGGAAC +
Preference number: 6 (lower is better)
Translates to: HRAGPAVHADKP*CFPSLHLSAGN
Trigger: GTTCCCTGCGCTCAGATGCAAGCTTGGAAAGCATCATGGCTTGTCTGCGTGCACTGCAGGCCCTGCTCGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 72 bp CACCAGGCTGCAGCCAGTCGAACAGAAATGCTAGGGTaGAGAACCACCGAGATGACGCTGTCCAGAAGGCCT +
Preference number: 6 (lower is better)
Translates to: HQAAASRTEMLG*RTTEMTLSRRP
Trigger: AGGCCTTCTGGACAGCGTCATCTCGGTGGTTCTGCACCCTAGCATTTCTGTTCGACTGGCTGCAGCCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 72 bp GCACAGAGAGCACCGGCTCGGCCTTCCAGGGTCACTTaGCAGGTAAACGAGTCTCCTCGGCTCTTTTCTGTT +
Preference number: 6 (lower is better)
Translates to: AQRAPARPSRVT*QVNESPRLFSV
Trigger: AACAGAAAAGAGCCGAGGAGACTCGTTTACCTGGCAAGTGACCCTGGAAGGCCGAGCCGGTGCTCTCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 72 bp GAGATGACGCTGTCCAGAAGGCCTGTGCTGGAATCCTaGAGCAAAGGCGCAGCTGTAGTGCCAAGGTTGTGG +
Preference number: 6 (lower is better)
Translates to: EMTLSRRPVLES*SKGAAVVPRLW
Trigger: CCACAACCTTGGCACTACAGCTGCGCCTTTGCTCCAGGATTCCAGCACAGGCCTTCTGGACAGCGTCATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 72 bp GGCACATGGATGTTGGAGTTACAGGCCTTGAGAGATTaGCACCGCCTTCATCTGGGTCAGCGAAGCCCGTGC +
Preference number: 6 (lower is better)
Translates to: GTWMLELQALRD*HRLHLGQRSPC
Trigger: GCACGGGCTTCGCTGACCCAGATGAAGGCGGTGCCAATCTCTCAAGGCCTGTAACTCCAACATCCATGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CAA 72 bp AGCACAGAGAGCACCGGCTCGGCCTTCCAGGGTCACTaGCCAGGTAAACGAGTCTCCTCGGCTCTTTTCTGT +
Preference number: 6 (lower is better)
Translates to: STESTGSAFQGH*PGKRVSSALFC
Trigger: ACAGAAAAGAGCCGAGGAGACTCGTTTACCTGGCAAGTGACCCTGGAAGGCCGAGCCGGTGCTCTCTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CAA 90 bp GCACAGCCCAGCAGACAGGACGTCCTTAAGGCGGACACGGAAGTATaGCTACCTTGTAGCTCTGGGCCTAACGTGGTAATGAGGGCGTTC +
Preference number: 6 (lower is better)
Translates to: AQPSRQDVLKADTEV*LPCSSGPNVVMRAF
Trigger: GAACGCCCTCATTACCACGTTAGGCCCAGAGCTACAAGGTAGCAATACTTCCGTGTCCGCCTTAAGGACGTCCTGTCTGCTGGGCTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040583.7
ENSMUST00000217966.2
CDS CAA 90 bp CTGATGATGATGAGCCCTGGCACATGGATGTTGGAGTTACAGGCCTaGAGAGATTGGCACCGCCTTCATCTGGGTCAGCGAAGCCCGTGC +
Preference number: 6 (lower is better)
Translates to: LMMMSPGTWMLELQA*RDWHRLHLGQRSPC
Trigger: GCACGGGCTTCGCTGACCCAGATGAAGGCGGTGCCAATCTCTCAAGGCCTGTAACTCCAACATCCATGTGCCAGGGCTCATCATCATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS TCA 72 bp TCTCTCCAAGCAGGCCTCCTAGAGTCGCTCGAAGAATaGATGAGACACAGCGGCGACAGCAGACGGCGTCAA +
Preference number: 6 (lower is better)
Translates to: SLQAGLLESLEE*MRHSGDSRRRQ
Trigger: TTGACGCCGTCTGCTGTCGCCGCTGTGTCTCATTCATTCTTCGAGCGACTCTAGGAGGCCTGCTTGGAGAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS TCA 72 bp AGCAACCAACAGCCATCCCGCTTGTGTGCGCTGAAGTaGCAGGCGGCTGTTTTGAGCAGCGGAACACAGCAA +
Preference number: 6 (lower is better)
Translates to: SNQQPSRLCALK*QAAVLSSGTQQ
Trigger: TTGCTGTGTTCCGCTGCTCAAAACAGCCGCCTGTCACTTCAGCGCACACAAGCGGGATGGCTGTTGGTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS TCA 72 bp CACGTGATAGAGTGCACCCGCAGAATCAATGGTCAGTaGCAAGGAGTGGAGTGCCCAGGTCTGCACGTCAGG +
Preference number: 6 (lower is better)
Translates to: HVIECTRRINGQ*QGVECPGLHVR
Trigger: CCTGACGTGCAGACCTGGGCACTCCACTCCTTGTCACTGACCATTGATTCTGCGGGTGCACTCTATCACGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040583.7
ENSMUST00000217966.2
CDS TCA 72 bp CAGTCTACTTCCCTCCTCCAACAGGGTCTTCGGCTTTaGAGCCTTTCCTCCTGGGCTACCTGCCAGCTTAGG +
Preference number: 6 (lower is better)
Translates to: QSTSLLQQGLRL*SLSSWATCQLR
Trigger: CCTAAGCTGGCAGGTAGCCCAGGAGGAAAGGCTTCAAAGCCGAAGACCCTGTTGGAGGAGGGAAGTAGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 72 bp ATTCTCCACCTGGGCCAAGGAACATCGAGCAGGGCCTaGAGTGCACGCAGACAAGCCATGATGCTTTCCAAG +
Preference number: 6 (lower is better)
Translates to: ILHLGQGTSSRA*SARRQAMMLSK
Trigger: CTTGGAAAGCATCATGGCTTGTCTGCGTGCACTGCAGGCCCTGCTCGATGTTCCTTGGCCCAGGTGGAGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 72 bp CGGGCCATGGGGGAAGTTAAGATTCCTTTCAGAGTCTaGAGGGAAGCCGTGACTGTGCAGGATAACTGGCCC +
Preference number: 6 (lower is better)
Translates to: RAMGEVKIPFRV*REAVTVQDNWP
Trigger: GGGCCAGTTATCCTGCACAGTCACGGCTTCCCTGCAGACTCTGAAAGGAATCTTAACTTCCCCCATGGCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 72 bp AGTGCACCCGCAGAATCAATGGTCAGTGACAAGGAGTaGAGTGCCCAGGTCTGCACGTCAGGAGAAGTGCTG +
Preference number: 6 (lower is better)
Translates to: SAPAESMVSDKE*SAQVCTSGEVL
Trigger: CAGCACTTCTCCTGACGTGCAGACCTGGGCACTCCACTCCTTGTCACTGACCATTGATTCTGCGGGTGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040583.7
ENSMUST00000217966.2
CDS CCA 72 bp GCTAATGCACTTTGGAGGAGGCTGGTCCAAGCTTCGTaGCTCTTTTCTGCCCGGGCCATGGGGGAAGTTAAG +
Preference number: 6 (lower is better)
Translates to: ANALWRRLVQAS*LFSARAMGEVK
Trigger: CTTAACTTCCCCCATGGCCCGGGCAGAAAAGAGCCACGAAGCTTGGACCAGCCTCCTCCAAAGTGCATTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CAA 72 bp TGGCACATGGATGTTGGAGTTACAGGCCTTGAGAGATaGGCACCGCCTTCATCTGGGTCAGCGAAGCCCGTG +
Preference number: 6 (lower is better)
Translates to: WHMDVGVTGLER*APPSSGSAKPV
Trigger: CACGGGCTTCGCTGACCCAGATGAAGGCGGTGCCAATCTCTCAAGGCCTGTAACTCCAACATCCATGTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS TCA 72 bp GCATGCTTAGAAGGCGGATCCACTCGGACACTTTCCTaGTTGCCTTTTACAGCAGCCTCCAGCCGGGCTTTC +
Preference number: 6 (lower is better)
Translates to: ACLEGGSTRTLS*LPFTAASSRAF
Trigger: GAAAGCCCGGCTGGAGGCTGCTGTAAAAGGCAATCAGGAAAGTGTCCGAGTGGATCCGCCTTCTAAGCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 72 bp AGGAGTGGAGTGCCCAGGTCTGCACGTCAGGAGAAGTaGTGTCCTGAGACAGGGTATAAAGGACTCCAATGC +
Preference number: 6 (lower is better)
Translates to: RSGVPRSARQEK*CPETGYKGLQC
Trigger: GCATTGGAGTCCTTTATACCCTGTCTCAGGACAGCACTTCTCCTGACGTGCAGACCTGGGCACTCCACTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040583.7
ENSMUST00000217966.2
CDS GCA 72 bp GGGCCCAGGAGTCGTGGTAGTGTAGCTTTGCACTCTTaGTCGTCTCTGCTGTGTAGAAAGCACCACCTTCAG +
Preference number: 6 (lower is better)
Translates to: GPRSRGSVALHS*SSLLCRKHHLQ
Trigger: CTGAAGGTGGTGCTTTCTACACAGCAGAGACGAGCAAGAGTGCAAAGCTACACTACCACGACTCCTGGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 72 bp CAAGAAGACACTTGGCAGCAGCACATCGGACAGCCATaGATCTGTCTGTTAAGCAGGACCGGGCAGCCTTGT +
Preference number: 6 (lower is better)
Translates to: QEDTWQQHIGQP*ICLLSRTGQPC
Trigger: ACAAGGCTGCCCGGTCCTGCTTAACAGACAGATCCATGGCTGTCCGATGTGCTGCTGCCAAGTGTCTTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 72 bp ACTACCAAGAGTGTGTCAAGGCCAGAGAGACGGAGCTaGTCACTGTGGTCTGTGGCAGCCATGAAAGCCATG +
Preference number: 6 (lower is better)
Translates to: TTKSVSRPERRS*SLWSVAAMKAM
Trigger: CATGGCTTTCATGGCTGCCACAGACCACAGTGACCAGCTCCGTCTCTCTGGCCTTGACACACTCTTGGTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 72 bp GGGGACTTCACGGCAGCTCCTGATGATGATGAGCCCTaGCACATGGATGTTGGAGTTACAGGCCTTGAGAGA +
Preference number: 6 (lower is better)
Translates to: GDFTAAPDDDEP*HMDVGVTGLER
Trigger: TCTCTCAAGGCCTGTAACTCCAACATCCATGTGCCAGGGCTCATCATCATCAGGAGCTGCCGTGAAGTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 72 bp TGGTCCAAGCTTCGTGGCTCTTTTCTGCCCGGGCCATaGGGGAAGTTAAGATTCCTTTCAGAGTCTGCAGGG +
Preference number: 6 (lower is better)
Translates to: WSKLRGSFLPGP*GKLRFLSESAG
Trigger: CCCTGCAGACTCTGAAAGGAATCTTAACTTCCCCCATGGCCCGGGCAGAAAAGAGCCACGAAGCTTGGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 72 bp AGTCAAGCACAGTTGCTAATGCACTTTGGAGGAGGCTaGTCCAAGCTTCGTGGCTCTTTTCTGCCCGGGCCA +
Preference number: 6 (lower is better)
Translates to: SQAQLLMHFGGG*SKLRGSFLPGP
Trigger: TGGCCCGGGCAGAAAAGAGCCACGAAGCTTGGACCAGCCTCCTCCAAAGTGCATTAGCAACTGTGCTTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CAA 72 bp ATGAGCCCTGGCACATGGATGTTGGAGTTACAGGCCTaGAGAGATTGGCACCGCCTTCATCTGGGTCAGCGA +
Preference number: 6 (lower is better)
Translates to: MSPGTWMLELQA*RDWHRLHLGQR
Trigger: TCGCTGACCCAGATGAAGGCGGTGCCAATCTCTCAAGGCCTGTAACTCCAACATCCATGTGCCAGGGCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CAA 72 bp GTGCTCCGTCAACTGGGCTCCAGCAGTCAAGCACAGTaGCTAATGCACTTTGGAGGAGGCTGGTCCAAGCTT +
Preference number: 6 (lower is better)
Translates to: VLRQLGSSSQAQ*LMHFGGGWSKL
Trigger: AAGCTTGGACCAGCCTCCTCCAAAGTGCATTAGCAACTGTGCTTGACTGCTGGAGCCCAGTTGACGGAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CAA 90 bp GCAAAGACTCTAGTGGCCCATCGAGGATTACTGAAAGGGTGTGGCTaGTCATCCCCTCTGGTCAAAACCGAGGCATCGTCACCTCTGTCG +
Preference number: 6 (lower is better)
Translates to: AKTLVAHRGLLKGCG*SSPLVKTEASSPLS
Trigger: CGACAGAGGTGACGATGCCTCGGTTTTGACCAGAGGGGATGACAAGCCACACCCTTTCAGTAATCCTCGATGGGCCACTAGAGTCTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CAA 90 bp ACTTCACGGCAGCTCCTGATGATGATGAGCCCTGGCACATGGATGTaGGAGTTACAGGCCTTGAGAGATTGGCACCGCCTTCATCTGGGT +
Preference number: 6 (lower is better)
Translates to: TSRQLLMMMSPGTWM*ELQALRDWHRLHLG
Trigger: ACCCAGATGAAGGCGGTGCCAATCTCTCAAGGCCTGTAACTCCAACATCCATGTGCCAGGGCTCATCATCATCAGGAGCTGCCGTGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS TCA 72 bp TCCTTTCAGCATATCTCCACTGGCTCGAAGGAATCCTaGACTCCCACGCAGAAACCCTGCTCCCAGCAGTTC +
Preference number: 6 (lower is better)
Translates to: SFQHISTGSKES*TPTQKPCSQQF
Trigger: GAACTGCTGGGAGCAGGGTTTCTGCGTGGGAGTTCAGGATTCCTTCGAGCCAGTGGAGATATGCTGAAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS TCA 72 bp ACGCAGACAAGCCATGATGCTTTCCAAGCTTGCATCTaGGCGCAGGGAACACAGGAACTCCACGCTGATTCC +
Preference number: 6 (lower is better)
Translates to: TQTSHDAFQACI*AQGTQELHADS
Trigger: GGAATCAGCGTGGAGTTCCTGTGTTCCCTGCGCTCAGATGCAAGCTTGGAAAGCATCATGGCTTGTCTGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 72 bp TTCAGCAAGGACAGGAGCTGCCCAACAAGAGTCTTCTaGTTCTCCCTGACGTCCTCCCTGTTTGTTGCTAGC +
Preference number: 6 (lower is better)
Translates to: FSKDRSCPTRVF*FSLTSSLFVAS
Trigger: GCTAGCAACAAACAGGGAGGACGTCAGGGAGAAGCAGAAGACTCTTGTTGGGCAGCTCCTGTCCTTGCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 72 bp GCGGCATCCATAACTTTCTTTAGCCTCCAGACTGCCTaGCAGATCTCCTTTGCAGCAGCTATCTGCGCCTTC +
Preference number: 6 (lower is better)
Translates to: AASITFFSLQTA*QISFAAAICAF
Trigger: GAAGGCGCAGATAGCTGCTGCAAAGGAGATCTGCCAGGCAGTCTGGAGGCTAAAGAAAGTTATGGATGCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 72 bp GCTAACCCAGCAGTAAAGGCTCCATCATCAGCCACTTaGGCTAACCTAGCCCATGCTTCCGAAGCTGCACAT +
Preference number: 6 (lower is better)
Translates to: ANPAVKAPSSAT*ANLAHASEAAH
Trigger: ATGTGCAGCTTCGGAAGCATGGGCTAGGTTAGCCCAAGTGGCTGATGATGGAGCCTTTACTGCTGGGTTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 72 bp CCTAAGTACCTATGCAGGGATCCCAGAGCCAGTGAGTaGCCTGTTCTGGTAACCACATCTCTCGCTGACTTC +
Preference number: 6 (lower is better)
Translates to: PKYLCRDPRASE*PVLVTTSLADF
Trigger: GAAGTCAGCGAGAGATGTGGTTACCAGAACAGGCCACTCACTGGCTCTGGGATCCCTGCATAGGTACTTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 72 bp GGGCTCCAGCAGTCAAGCACAGTTGCTAATGCACTTTaGAGGAGGCTGGTCCAAGCTTCGTGGCTCTTTTCT +
Preference number: 6 (lower is better)
Translates to: GLQQSSTVANAL*RRLVQASWLFS
Trigger: AGAAAAGAGCCACGAAGCTTGGACCAGCCTCCTCCAAAGTGCATTAGCAACTGTGCTTGACTGCTGGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 72 bp GCCTTTTACAGCAGCCTCCAGCCGGGCTTTCAGGGCTaGGGAAGAAGCCATGACTCTTTTAAACACAGACGA +
Preference number: 6 (lower is better)
Translates to: AFYSSLQPGFQG*GRSHDSFKHRR
Trigger: TCGTCTGTGTTTAAAAGAGTCATGGCTTCTTCCCCAGCCCTGAAAGCCCGGCTGGAGGCTGCTGTAAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CAA 72 bp TCAGTAAGGAGATCACCACAGTGCGAAATGAAACTCTaGACAGCACAGAGAGCACCGGCTCGGCCTTCCAGG +
Preference number: 6 (lower is better)
Translates to: SVRRSPQCEMKL*TAQRAPARPSR
Trigger: CCTGGAAGGCCGAGCCGGTGCTCTCTGTGCTGTCAAGAGTTTCATTTCGCACTGTGGTGATCTCCTTACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CAA 72 bp CTAGTGGCCCATCGAGGATTACTGAAAGGGTGTGGCTaGTCATCCCCTCTGGTCAAAACCGAGGCATCGTCA +
Preference number: 6 (lower is better)
Translates to: LVAHRGLLKGCG*SSPLVKTEASS
Trigger: TGACGATGCCTCGGTTTTGACCAGAGGGGATGACAAGCCACACCCTTTCAGTAATCCTCGATGGGCCACTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CAA 72 bp CAGCTCCTGATGATGATGAGCCCTGGCACATGGATGTaGGAGTTACAGGCCTTGAGAGATTGGCACCGCCTT +
Preference number: 6 (lower is better)
Translates to: QLLMMMSPGTWM*ELQALRDWHRL
Trigger: AAGGCGGTGCCAATCTCTCAAGGCCTGTAACTCCAACATCCATGTGCCAGGGCTCATCATCATCAGGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CAA 72 bp TGTGACGGCAGTAAGCAGACTGACTTCATCAGGTTCTaGTGCTCCGTCAACTGGGCTCCAGCAGTCAAGCAC +
Preference number: 6 (lower is better)
Translates to: CDGSKQTDFIRF*CSVNWAPAVKH
Trigger: GTGCTTGACTGCTGGAGCCCAGTTGACGGAGCACAAGAACCTGATGAAGTCAGTCTGCTTACTGCCGTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CAA 72 bp GTCTTTAGCTGGATGCTGGAGTTCCTGGCCAGGTTCTaGGCATGCTTAGAAGGCGGATCCACTCGGACACTT +
Preference number: 6 (lower is better)
Translates to: VFSWMLEFLARF*ACLEGGSTRTL
Trigger: AAGTGTCCGAGTGGATCCGCCTTCTAAGCATGCCAAGAACCTGGCCAGGAACTCCAGCATCCAGCTAAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 72 bp TCTGCGGAGATCGCTGAGGTCACTAACAACCCCACTTaGTATCCAAGCACTGCAAACCTGACATGCTTTGGC +
Preference number: 6 (lower is better)
Translates to: SAEIAEVTNNPT*YPSTANLTCFG
Trigger: GCCAAAGCATGTCAGGTTTGCAGTGCTTGGATAGCAAGTGGGGTTGTTAGTGACCTCAGCGATCTCCGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 72 bp TTTCCAAGTTCTTGTAAAGCACAAACCAGCACATGCTaGCTGGCGGCTACATCCGTGGAACTGAGACGGGTC +
Preference number: 6 (lower is better)
Translates to: FPSSCKAQTSTC*LAATSVELRRV
Trigger: GACCCGTCTCAGTTCCACGGATGTAGCCGCCAGCCAGCATGTGCTGGTTTGTGCTTTACAAGAACTTGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 72 bp AAAGAGCTTGGATGCAGAGCTAATCACAGACAGTGCTaGAGGCAGGGGCTTAGGCACAGAGTCTCCTTCTAC +
Preference number: 6 (lower is better)
Translates to: KELGCRANHRQC*RQGLRHRVSFY
Trigger: GTAGAAGGAGACTCTGTGCCTAAGCCCCTGCCTCCAGCACTGTCTGTGATTAGCTCTGCATCCAAGCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 72 bp TACGAGTCCTCCTGTGTCCTTCCCTTCACCAAACTCTaGCAGGGTTTCCTTCTCAGAGGCTCCATCATCAAC +
Preference number: 6 (lower is better)
Translates to: YESSCVLPFTKL*QGFLLRGSIIN
Trigger: GTTGATGATGGAGCCTCTGAGAAGGAAACCCTGCCAGAGTTTGGTGAAGGGAAGGACACAGGAGGACTCGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CAA 72 bp AGCAGACAGGACGTCCTTAAGGCGGACACGGAAGTATaGCTACCTTGTAGCTCTGGGCCTAACGTGGTAATG +
Preference number: 6 (lower is better)
Translates to: SRQDVLKADTEV*LPCSSGPNVVM
Trigger: CATTACCACGTTAGGCCCAGAGCTACAAGGTAGCAATACTTCCGTGTCCGCCTTAAGGACGTCCTGTCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040583.7
ENSMUST00000217966.2
CDS CAA 72 bp CTGAAAAATGGAGTGGAGGAGCTGACAGGTCTTCATTaGCACCACAGAGTCCTTGCTCTCCAGGGCAGCCTT +
Preference number: 6 (lower is better)
Translates to: LKNGVEELTGLH*HHRVLALQGSL
Trigger: AAGGCTGCCCTGGAGAGCAAGGACTCTGTGGTGCAAATGAAGACCTGTCAGCTCCTCCACTCCATTTTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS TCA 72 bp AGCCTGAGTAACTCCGACTCGAACGTCTCTGCTGACTaGACTGTTTCCTTTCAGCATATCTCCACTGGCTCG +
Preference number: 6 (lower is better)
Translates to: SLSNSDSNVSAD*TVSFQHISTGS
Trigger: CGAGCCAGTGGAGATATGCTGAAAGGAAACAGTTCAGTCAGCAGAGACGTTCGAGTCGGAGTTACTCAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS TCA 72 bp TCCAGGGCAGCCTTAAATTTTTCAATGCAGCGATTCTaGAGGCAGGGGACGGTTGTCACTTCTGGGCTGGTA +
Preference number: 6 (lower is better)
Translates to: SRAALNFSMQRF*RQGTVVTSGLV
Trigger: TACCAGCCCAGAAGTGACAACCGTCCCCTGCCTTCAGAATCGCTGCATTGAAAAATTTAAGGCTGCCCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 72 bp ACTCTACGAGCACTCTGCTTTGAGCCTGCTCCTGGATaGTTAGCAGTTACAGCTTTAGCCAACACTGTACCC +
Preference number: 6 (lower is better)
Translates to: TLRALCFEPAPG*LAVTALANTVP
Trigger: GGGTACAGTGTTGGCTAAAGCTGTAACTGCTAAGCATCCAGGAGCAGGCTCAAAGCAGAGTGCTCGTAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 72 bp TCCAGAACTTCCTCCAGTGACACTCTACGAGCACTCTaGTTTGAGCCTGCTCCTGGATGCTTAGCAGTTACA +
Preference number: 6 (lower is better)
Translates to: SRTSSSDTLRAL*FEPAPGCLAVT
Trigger: TGTAACTGCTAAGCATCCAGGAGCAGGCTCAAAGCAGAGTGCTCGTAGAGTGTCACTGGAGGAAGTTCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 72 bp AATGAGACACAGCGGCGACAGCAGACGGCGTCAATCTaGGTCTGTGTGGCTTTAGGATTTGACTGTGATACA +
Preference number: 6 (lower is better)
Translates to: NETQRRQQTASI*VCVALGFDCDT
Trigger: TGTATCACAGTCAAATCCTAAAGCCACACAGACGCAGATTGACGCCGTCTGCTGTCGCCGCTGTGTCTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 72 bp AGATTTCCAAGTTCTTGTAAAGCACAAACCAGCACATaGTGGCTGGCGGCTACATCCGTGGAACTGAGACGG +
Preference number: 6 (lower is better)
Translates to: RFPSSCKAQTST*WLAATSVELRR
Trigger: CCGTCTCAGTTCCACGGATGTAGCCGCCAGCCAGCATGTGCTGGTTTGTGCTTTACAAGAACTTGGAAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 72 bp CGCTGGATGACTTCCTCAGTAAGGAGATCACCACAGTaGGAAATGAAACTCTTGACAGCACAGAGAGCACCG +
Preference number: 6 (lower is better)
Translates to: RWMTSSVRRSPQ*EMKLLTAQRAP
Trigger: CGGTGCTCTCTGTGCTGTCAAGAGTTTCATTTCGCACTGTGGTGATCTCCTTACTGAGGAAGTCATCCAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 72 bp AAGTGCTGTCCTGAGACAGGGTATAAAGGACTCCAATaGAAGAACTCAAGTGCTGAGGCCCTATGCCCCCTA +
Preference number: 6 (lower is better)
Translates to: KCCPETGYKGLQ*KNSSAEALCPL
Trigger: TAGGGGGCATAGGGCCTCAGCACTTGAGTTCTTGCATTGGAGTCCTTTATACCCTGTCTCAGGACAGCACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040583.7
ENSMUST00000217966.2
CDS GCA 72 bp ACCGAGGCATCGTCACCTCTGTCGCCTTCTTCCTCCTaGATTGTATCCACGCAAGTTACAGCTGTAAAGTCA +
Preference number: 6 (lower is better)
Translates to: TEASSPLSPSSS*IVSTQVTAVKS
Trigger: TGACTTTACAGCTGTAACTTGCGTGGATACAATGCAGGAGGAAGAAGGCGACAGAGGTGACGATGCCTCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 72 bp TCCACGTCTGTGCTCCACATAAAGATGGCCTCATTCTaGAGTTCAAGAAGACACTTGGCAGCAGCACATCGG +
Preference number: 6 (lower is better)
Translates to: STSVLHIKMASF*SSRRHLAAAHR
Trigger: CCGATGTGCTGCTGCCAAGTGTCTTCTTGAACTCCAGAATGAGGCCATCTTTATGTGGAGCACAGACGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 72 bp AATCCTGAAGTGCAGCAAGCCAGAGTTTGCTTAGCGTaGCCAGGTCAGTGCAGACTAAGTCAAGAAGACCAG +
Preference number: 6 (lower is better)
Translates to: NPEVQQARVCLA*PGQCRLSQEDQ
Trigger: CTGGTCTTCTTGACTTAGTCTGCACTGACCTGGCCACGCTAAGCAAACTCTGGCTTGCTGCACTTCAGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 72 bp GCAGCGATTCTGAAGGCAGGGGACGGTTGTCACTTCTaGGCTGGTAGACAAAATAAATACTGTGACGGCAGT +
Preference number: 6 (lower is better)
Translates to: AAILKAGDGCHF*AGRQNKYCDGS
Trigger: ACTGCCGTCACAGTATTTATTTTGTCTACCAGCCCAGAAGTGACAACCGTCCCCTGCCTTCAGAATCGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CAA 90 bp CCTGTGCTGGAATCCTGGAGCAAAGGCGCAGCTGTAGTGCCAAGGTaGTGGATCAGATTTCCAAGTTCTTGTAAAGCACAAACCAGCACA +
Preference number: 6 (lower is better)
Translates to: PVLESWSKGAAVVPR*WIRFPSSCKAQTST
Trigger: TGTGCTGGTTTGTGCTTTACAAGAACTTGGAAATCTGATCCACAACCTTGGCACTACAGCTGCGCCTTTGCTCCAGGATTCCAGCACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS TCA 72 bp AGGGTGAGCTTCCCTACTGCCATGGACGTCAGCATATaGTGCAATGTCTCTCTGATATCCTGGCACAAGCTT +
Preference number: 6 (lower is better)
Translates to: RVSFPTAMDVSI*CNVSLISWHKL
Trigger: AAGCTTGTGCCAGGATATCAGAGAGACATTGCATCATATGCTGACGTCCATGGCAGTAGGGAAGCTCACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS TCA 72 bp TTGCATCTGAGCGCAGGGAACACAGGAACTCCACGCTaGTTCCTAGAATCAGATGGAACCTGTCAGTGTAGA +
Preference number: 6 (lower is better)
Translates to: LHLSAGNTGTPR*FLESDGTCQCR
Trigger: TCTACACTGACAGGTTCCATCTGATTCTAGGAATCAGCGTGGAGTTCCTGTGTTCCCTGCGCTCAGATGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS TCA 72 bp AAGTTAAGATTCCTTTCAGAGTCTGCAGGGAAGCCGTaGCTGTGCAGGATAACTGGCCCCCAGGTAACTTCA +
Preference number: 6 (lower is better)
Translates to: KLRFLSESAGKP*LCRITGPQVTS
Trigger: TGAAGTTACCTGGGGGCCAGTTATCCTGCACAGTCACGGCTTCCCTGCAGACTCTGAAAGGAATCTTAACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 72 bp AGAGAGCAAAATCCTGAAGTGCAGCAAGCCAGAGTTTaGTTAGCGTGGCCAGGTCAGTGCAGACTAAGTCAA +
Preference number: 6 (lower is better)
Translates to: REQNPEVQQARV*LAWPGQCRLSQ
Trigger: TTGACTTAGTCTGCACTGACCTGGCCACGCTAAGCAAACTCTGGCTTGCTGCACTTCAGGATTTTGCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 72 bp GGCCCAATCTGCATGAGACTGTGCAAAGCAAAGTCGTaGAGACTTCTCGTTACTGAAGTTGCTGATCCCAGA +
Preference number: 6 (lower is better)
Translates to: GPICMRLCKAKS*RLLVTEVADPR
Trigger: TCTGGGATCAGCAACTTCAGTAACGAGAAGTCTGCACGACTTTGCTTTGCACAGTCTCATGCAGATTGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CAA 90 bp ACCACAGTGTCAGTGAAGCCATTAGCCAGGATTCTACCCAATTTCTaGTACAAGGAACCCAAGCACACCACAGCAGCAAGTTTGGTGGGA +
Preference number: 6 (lower is better)
Translates to: TTVSVKPLARILPNF*YKEPKHTTAASLVG
Trigger: TCCCACCAAACTTGCTGCTGTGGTGTGCTTGGGTTCCTTGTACAAGAAATTGGGTAGAATCCTGGCTAATGGCTTCACTGACACTGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS TCA 72 bp ATGCTGTTCAAAAGCTGCTCCAGTATCAGAACCCTCTaGGCTTCATCCACAGTAGCACAGACAACCCCAAAG +
Preference number: 6 (lower is better)
Translates to: MLFKSCSSIRTL*ASSTVAQTTPK
Trigger: CTTTGGGGTTGTCTGTGCTACTGTGGATGAAGCTCAGAGGGTTCTGATACTGGAGCAGCTTTTGAACAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS TCA 72 bp ACATCTCTCGCTGACTTCAATTTGTCGAAGCTAAGTTaGGCTAACCCAGCAGTAAAGGCTCCATCATCAGCC +
Preference number: 6 (lower is better)
Translates to: TSLADFNLSKLS*ANPAVKAPSSA
Trigger: GGCTGATGATGGAGCCTTTACTGCTGGGTTAGCTCAACTTAGCTTCGACAAATTGAAGTCAGCGAGAGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS TCA 72 bp CAGATAATCTGCCTGACCACTTCAAGTGAAGCCAGTTaGATGGCTGGTGACTCTCTGGTCAAAATTACTCGG +
Preference number: 6 (lower is better)
Translates to: QIICLTTSSEAS*MAGDSLVKITR
Trigger: CCGAGTAATTTTGACCAGAGAGTCACCAGCCATTCAACTGGCTTCACTTGAAGTGGTCAGGCAGATTATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 72 bp AGGAGCTGCTCTTCAATAAACCTATGGTCGGTCTCCTaGAGCAAAGGACTTAATATCAAGAGGTCATCCGGA +
Preference number: 6 (lower is better)
Translates to: RSCSSINLWSVS*SKGLNIKRSSG
Trigger: TCCGGATGACCTCTTGATATTAAGTCCTTTGCTGCAGGAGACCGACCATAGGTTTATTGAAGAGCAGCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 72 bp GTTAGGACGAGTCTTCTCACCTCTGGACCTAAGCTTTaGTTAGAGCCAGCCACATACTTCAGTAAGTTGGAA +
Preference number: 6 (lower is better)
Translates to: VRTSLLTSGPKL*LEPATYFSKLE
Trigger: TTCCAACTTACTGAAGTATGTGGCTGGCTCTAAGCAAAGCTTAGGTCCAGAGGTGAGAAGACTCGTCCTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 72 bp TTTACAAAGCTTCAGCCAAAGGGTGAGCTTCCCTACTaGCATGGACGTCAGCATATGATGCAATGTCTCTCT +
Preference number: 6 (lower is better)
Translates to: FTKLQPKGELPY*HGRQHMMQCLS
Trigger: AGAGAGACATTGCATCATATGCTGACGTCCATGGCAGTAGGGAAGCTCACCCTTTGGCTGAAGCTTTGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS GCA 72 bp ACTCTTTTAAACACAGACGAGTACCGAGGCCCAATCTaGATGAGACTGTGCAAAGCAAAGTCGTGCAGACTT +
Preference number: 6 (lower is better)
Translates to: TLLNTDEYRGPI*MRLCKAKSCRL
Trigger: AAGTCTGCACGACTTTGCTTTGCACAGTCTCATGCAGATTGGGCCTCGGTACTCGTCTGTGTTTAAAAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 72 bp CCATTGCCAAGCAGGAGCTGCTCTTCAATAAACCTATaGTCGGTCTCCTGCAGCAAAGGACTTAATATCAAG +
Preference number: 6 (lower is better)
Translates to: PLPSRSCSSINL*SVSCSKGLNIK
Trigger: CTTGATATTAAGTCCTTTGCTGCAGGAGACCGACCATAGGTTTATTGAAGAGCAGCTCCTGCTTGGCAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 72 bp CAACATGCAACTGAACGGTTTGCTGACGAGCTCCTTTaGTGTGCTTTATGCTGTTCAAAAGCTGCTCCAGTA +
Preference number: 6 (lower is better)
Translates to: QHATERFADELL*CALCCSKAAPV
Trigger: TACTGGAGCAGCTTTTGAACAGCATAAAGCACACCAAAGGAGCTCGTCAGCAAACCGTTCAGTTGCATGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CAA 72 bp TCAGTGAAGCCATTAGCCAGGATTCTACCCAATTTCTaGTACAAGGAACCCAAGCACACCACAGCAGCAAGT +
Preference number: 6 (lower is better)
Translates to: SVKPLARILPNF*YKEPKHTTAAS
Trigger: ACTTGCTGCTGTGGTGTGCTTGGGTTCCTTGTACAAGAAATTGGGTAGAATCCTGGCTAATGGCTTCACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CAA 72 bp GCAAAGCAAAGTCGTGCAGACTTCTCGTTACTGAAGTaGCTGATCCCAGAGCATTCTCATCCAAAAGGAAGG +
Preference number: 6 (lower is better)
Translates to: AKQSRADFSLLK*LIPEHSHPKGR
Trigger: CCTTCCTTTTGGATGAGAATGCTCTGGGATCAGCAACTTCAGTAACGAGAAGTCTGCACGACTTTGCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS TCA 72 bp TCCTCTGCTATTGTCATGATAATCTTGCCCTTTCCATaGGGAATTCCCAAAGGACAGTGTGTCACTGAACCG +
Preference number: 6 (lower is better)
Translates to: SSAIVMIILPFP*GIPKGQCVTEP
Trigger: CGGTTCAGTGACACACTGTCCTTTGGGAATTCCTCATGGAAAGGGCAAGATTATCATGACAATAGCAGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 72 bp GCACACCACAGCAGCAAGTTTGGTGGGAAGGTAACTTaGAGAGTCATCTTTGCTCCGAATAAGATCATTACA +
Preference number: 6 (lower is better)
Translates to: AHHSSKFGGKVT*RVIFAPNKIIT
Trigger: TGTAATGATCTTATTCGGAGCAAAGATGACTCTCCAAGTTACCTTCCCACCAAACTTGCTGCTGTGGTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CAA 72 bp GTTGGAAATGGCAGAAACAACATGCAACTGAACGGTTaGCTGACGAGCTCCTTTGGTGTGCTTTATGCTGTT +
Preference number: 6 (lower is better)
Translates to: VGNGRNNMQLNG*LTSSFGVLYAV
Trigger: AACAGCATAAAGCACACCAAAGGAGCTCGTCAGCAAACCGTTCAGTTGCATGTTGTTTCTGCCATTTCCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CAA 72 bp TATACTCTGCAGACTCAGCATGATCTCATAGCGGCCTaGAGACTCTGCACTCTTCATCGCTTTAAGAATATT +
Preference number: 6 (lower is better)
Translates to: YTLQTQHDLIAA*RLCTLHRFKNI
Trigger: AATATTCTTAAAGCGATGAAGAGTGCAGAGTCTCAAGGCCGCTATGAGATCATGCTGAGTCTGCAGAGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CCA 72 bp CTTCAAGTGAAGCCAGTTGAATGGCTGGTGACTCTCTaGTCAAAATTACTCGGTGTAGTACATTTAGCAATT +
Preference number: 6 (lower is better)
Translates to: LQVKPVEWLVTL*SKLLGVVHLAI
Trigger: AATTGCTAAATGTACTACACCGAGTAATTTTGACCAGAGAGTCACCAGCCATTCAACTGGCTTCACTTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CAA 90 bp AGAATTAACAGTAGTCTTCAAGGCTTGCTTGTGATTTTTATGTCTTaGTACAGCAATTATATAGACCTCTGCCCAGGCTCTCAGCACAGC +
Preference number: 6 (lower is better)
Translates to: RINSSLQGLLVIFMS*YSNYIDLCPGSQHS
Trigger: GCTGTGCTGAGAGCCTGGGCAGAGGTCTATATAATTGCTGTACAAAGACATAAAAATCACAAGCAAGCCTTGAAGACTACTGTTAATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CAA 72 bp AGTAGTCTTCAAGGCTTGCTTGTGATTTTTATGTCTTaGTACAGCAATTATATAGACCTCTGCCCAGGCTCT +
Preference number: 6 (lower is better)
Translates to: SSLQGLLVIFMS*YSNYIDLCPGS
Trigger: AGAGCCTGGGCAGAGGTCTATATAATTGCTGTACAAAGACATAAAAATCACAAGCAAGCCTTGAAGACTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7
CDS CAA 90 bp CCCGTTTCTCATACTGTCTTCAGAATTAACAGTAGTCTTCAAGGCTaGCTTGTGATTTTTATGTCTTTGTACAGCAATTATATAGACCTC +
Preference number: 6 (lower is better)
Translates to: PVSHTVFRINSSLQG*LVIFMSLYSNYIDL
Trigger: GAGGTCTATATAATTGCTGTACAAAGACATAAAAATCACAAGCAAGCCTTGAAGACTACTGTTAATTCTGAAGACAGTATGAGAAACGGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040583.7