RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HEATR4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000090843

Ensembl transcript IDs: ENSMUST00000164935.3

Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp TCCAGAAGCAGCACATCCAGGAAGGTGTCCCTGACCTGGGCGCCGTaGAGCTTGAGGGCTAGGATGCTCCGGCAGGCTTCCAGCCGCACG +
Preference number: 5 (lower is better)
Translates to: SRSSTSRKVSLTWAP*SLRARMLRQASSRT
Trigger: CGTGCGGCTGGAAGCCTGCCGGAGCATCCTAGCCCTCAAGCTTCACGGCGCCCAGGTCAGGGACACCTTCCTGGATGTGCTGCTTCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS GCA 90 bp AGGCACACCCAGCCTTGTCCGTGGGTCTTGAGTGGAGGAAGACCATaGCCCATCCTAGCCGAGGGGGCTGTGGCTCAAGGCAGTGAGAGG +
Preference number: 5 (lower is better)
Translates to: RHTQPCPWVLSGGRP*PILAEGAVAQGSER
Trigger: CCTCTCACTGCCTTGAGCCACAGCCCCCTCGGCTAGGATGGGGCATGGTCTTCCTCCACTCAAGACCCACGGACAAGGCTGGGTGTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS GCA 90 bp TCATCCCTAATGTGGCTCCAGTCGTACTGCTGGCGGAGAAAGGACTaGCACTTGTTGGGCGACTGTCCGGGCCTCGGTGGCCGCTTGCTC +
Preference number: 5 (lower is better)
Translates to: SSLMWLQSYCWRRKD*HLLGDCPGLGGRLL
Trigger: GAGCAAGCGGCCACCGAGGCCCGGACAGTCGCCCAACAAGTGGCAGTCCTTTCTCCGCCAGCAGTACGACTGGAGCCACATTAGGGATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CCA 90 bp ACTCTGGAGACTGAGGCACACCCAGCCTTGTCCGTGGGTCTTGAGTaGAGGAAGACCATGCCCCATCCTAGCCGAGGGGGCTGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: TLETEAHPALSVGLE*RKTMPHPSRGGCGS
Trigger: TGAGCCACAGCCCCCTCGGCTAGGATGGGGCATGGTCTTCCTCCACTCAAGACCCACGGACAAGGCTGGGTGTGCCTCAGTCTCCAGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CCA 90 bp GCGGAGAAAGGACTGCCACTTGTTGGGCGACTGTCCGGGCCTCGGTaGCCGCTTGCTCTGGATCCATCGAGAGGTGCGCTTGTCCAGTTT +
Preference number: 5 (lower is better)
Translates to: AEKGLPLVGRLSGPR*PLALDPSRGALVQF
Trigger: AAACTGGACAAGCGCACCTCTCGATGGATCCAGAGCAAGCGGCCACCGAGGCCCGGACAGTCGCCCAACAAGTGGCAGTCCTTTCTCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CCA 90 bp CTCCGCAGGATGGCCAGCTCCCACGGCACATCCTCCTCCACGGGTTaGACCTGCTTCTTTTGTCTCCTTGTCTTGGCAGACGTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: LRRMASSHGTSSSTG*TCFFCLLVLADVAS
Trigger: GGAGGCCACGTCTGCCAAGACAAGGAGACAAAAGAAGCAGGTCCAACCCGTGGAGGAGGATGTGCCGTGGGAGCTGGCCATCCTGCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS GCA 90 bp AGGACTGCCACTTGTTGGGCGACTGTCCGGGCCTCGGTGGCCGCTTaGTCTGGATCCATCGAGAGGTGCGCTTGTCCAGTTTCTCCAGAA +
Preference number: 5 (lower is better)
Translates to: RTATCWATVRASVAA*SGSIERCACPVSPE
Trigger: TTCTGGAGAAACTGGACAAGCGCACCTCTCGATGGATCCAGAGCAAGCGGCCACCGAGGCCCGGACAGTCGCCCAACAAGTGGCAGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CCA 90 bp CTCCAGAACAATGGCTTCCCAGCCTCGCGCCTCCTTCTCCCCAGGTaGAAGCCAGGTTTCCCTTTCTTCCAGACTCTCATCCGGAGAGGC +
Preference number: 5 (lower is better)
Translates to: LQNNGFPASRLLLPR*KPGFPFFQTLIRRG
Trigger: GCCTCTCCGGATGAGAGTCTGGAAGAAAGGGAAACCTGGCTTCCACCTGGGGAGAAGGAGGCGCGAGGCTGGGAAGCCATTGTTCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CCA 90 bp TCTGGATCCATCGAGAGGTGCGCTTGTCCAGTTTCTCCAGAACAATaGCTTCCCAGCCTCGCGCCTCCTTCTCCCCAGGTGGAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: SGSIERCACPVSPEQ*LPSLAPPSPQVEAR
Trigger: CCTGGCTTCCACCTGGGGAGAAGGAGGCGCGAGGCTGGGAAGCCATTGTTCTGGAGAAACTGGACAAGCGCACCTCTCGATGGATCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CCA 90 bp TGCCACTTGTTGGGCGACTGTCCGGGCCTCGGTGGCCGCTTGCTCTaGATCCATCGAGAGGTGCGCTTGTCCAGTTTCTCCAGAACAATG +
Preference number: 5 (lower is better)
Translates to: CHLLGDCPGLGGRLL*IHREVRLSSFSRTM
Trigger: CATTGTTCTGGAGAAACTGGACAAGCGCACCTCTCGATGGATCCAGAGCAAGCGGCCACCGAGGCCCGGACAGTCGCCCAACAAGTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS GCA 90 bp AGGATGGCCAGCTCCCACGGCACATCCTCCTCCACGGGTTGGACCTaGTTCTTTTGTCTCCTTGTCTTGGCAGACGTGGCCTCCTTACCT +
Preference number: 5 (lower is better)
Translates to: RMASSHGTSSSTGWT*FFCLLVLADVASLP
Trigger: AGGTAAGGAGGCCACGTCTGCCAAGACAAGGAGACAAAAGAAGCAGGTCCAACCCGTGGAGGAGGATGTGCCGTGGGAGCTGGCCATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS GCA 90 bp GATCACCGGGTAGGTGGCAATGCCTTCCAGAGCCAAGCACTGAGCTaGGGCCCAGCTGTCCACACTGTTACCCTTTATGAGGGCTGTCTG +
Preference number: 5 (lower is better)
Translates to: DHRVGGNAFQSQALS*GPAVHTVTLYEGCL
Trigger: CAGACAGCCCTCATAAAGGGTAACAGTGTGGACAGCTGGGCCGCAGCTCAGTGCTTGGCTCTGGAAGGCATTGCCACCTACCCGGTGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CCA 90 bp CTGGATGAAGTGAGCTCATCCCTAATGTGGCTCCAGTCGTACTGCTaGCGGAGAAAGGACTGCCACTTGTTGGGCGACTGTCCGGGCCTC +
Preference number: 5 (lower is better)
Translates to: LDEVSSSLMWLQSYC*RRKDCHLLGDCPGL
Trigger: GAGGCCCGGACAGTCGCCCAACAAGTGGCAGTCCTTTCTCCGCCAGCAGTACGACTGGAGCCACATTAGGGATGAGCTCACTTCATCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CCA 90 bp CATCCTCCTCCACGGGTTGGACCTGCTTCTTTTGTCTCCTTGTCTTaGCAGACGTGGCCTCCTTACCTACCTGCAGCAGGCTGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: HPPPRVGPASFVSLS*QTWPPYLPAAGWPQ
Trigger: CTGAGGCCAGCCTGCTGCAGGTAGGTAAGGAGGCCACGTCTGCCAAGACAAGGAGACAAAAGAAGCAGGTCCAACCCGTGGAGGAGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS GCA 90 bp TCACTGGATGAAGTGAGCTCATCCCTAATGTGGCTCCAGTCGTACTaGTGGCGGAGAAAGGACTGCCACTTGTTGGGCGACTGTCCGGGC +
Preference number: 5 (lower is better)
Translates to: SLDEVSSSLMWLQSY*WRRKDCHLLGDCPG
Trigger: GCCCGGACAGTCGCCCAACAAGTGGCAGTCCTTTCTCCGCCAGCAGTACGACTGGAGCCACATTAGGGATGAGCTCACTTCATCCAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CCA 90 bp CCACGGGTTGGACCTGCTTCTTTTGTCTCCTTGTCTTGGCAGACGTaGCCTCCTTACCTACCTGCAGCAGGCTGGCCTCAGTTGGCAATG +
Preference number: 5 (lower is better)
Translates to: PRVGPASFVSLSWQT*PPYLPAAGWPQLAM
Trigger: CATTGCCAACTGAGGCCAGCCTGCTGCAGGTAGGTAAGGAGGCCACGTCTGCCAAGACAAGGAGACAAAAGAAGCAGGTCCAACCCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS TCA 90 bp CAGTGGCCTGGTTGTTCTTGTGGAAAAGCTGGTGGAGGATCCTCTTaGTCACCGGGTAGGTGGCAATGCCTTCCAGAGCCAAGCACTGAG +
Preference number: 5 (lower is better)
Translates to: QWPGCSCGKAGGGSS*SPGRWQCLPEPSTE
Trigger: CTCAGTGCTTGGCTCTGGAAGGCATTGCCACCTACCCGGTGATCAAGAGGATCCTCCACCAGCTTTTCCACAAGAACAACCAGGCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS GCA 90 bp TTGGCCGCTGCCCTTTTCAAATACTGGGTCTTGAGTCTCTCGCAGTaGCGTGGGCTGAAGTGGAAGACAGGTGGTACTCTGGAGACTGAG +
Preference number: 5 (lower is better)
Translates to: LAAALFKYWVLSLSQ*RGLKWKTGGTLETE
Trigger: CTCAGTCTCCAGAGTACCACCTGTCTTCCACTTCAGCCCACGGCACTGCGAGAGACTCAAGACCCAGTATTTGAAAAGGGCAGCGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS GCA 90 bp TTCTTTTGTCTCCTTGTCTTGGCAGACGTGGCCTCCTTACCTACCTaGAGCAGGCTGGCCTCAGTTGGCAATGCAGTCCAACGCTGGACT +
Preference number: 5 (lower is better)
Translates to: FFCLLVLADVASLPT*SRLASVGNAVQRWT
Trigger: AGTCCAGCGTTGGACTGCATTGCCAACTGAGGCCAGCCTGCTGCAGGTAGGTAAGGAGGCCACGTCTGCCAAGACAAGGAGACAAAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS GCA 90 bp TCTGAGAGAAAGCACGGCAGGCCACGATGCGGTCCTTCCATTGCCTaGTGTTCAGCTCCACAGCAAGCATCGTGTGGATCAGGGTCTTAT +
Preference number: 5 (lower is better)
Translates to: SERKHGRPRCGPSIA*CSAPQQASCGSGSY
Trigger: ATAAGACCCTGATCCACACGATGCTTGCTGTGGAGCTGAACAGCAGGCAATGGAAGGACCGCATCGTGGCCTGCCGTGCTTTCTCTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS GCA 90 bp CACCATCCGGTCACGGATCTGCAAGGCACCTGCCGCCAAACAAGCTaGCTGTCGAATTCCTGTGAACTCATCAGAGAAGCAGGTCAGGAA +
Preference number: 5 (lower is better)
Translates to: HHPVTDLQGTCRQTS*LSNSCELIREAGQE
Trigger: TTCCTGACCTGCTTCTCTGATGAGTTCACAGGAATTCGACAGGCAGCTTGTTTGGCGGCAGGTGCCTTGCAGATCCGTGACCGGATGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CCA 90 bp TTCAAATACTGGGTCTTGAGTCTCTCGCAGTGCCGTGGGCTGAAGTaGAAGACAGGTGGTACTCTGGAGACTGAGGCACACCCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: FKYWVLSLSQCRGLK*KTGGTLETEAHPAL
Trigger: CAAGGCTGGGTGTGCCTCAGTCTCCAGAGTACCACCTGTCTTCCACTTCAGCCCACGGCACTGCGAGAGACTCAAGACCCAGTATTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS GCA 90 bp CCCTTTATGAGGGCTGTCTGCATGATGTCTCGGGCAGTGGGATTATaGGATTGTATGCAATACTGGCATACTGCGGCCGCCATCCTCACG +
Preference number: 5 (lower is better)
Translates to: PFMRAVCMMSRAVGL*DCMQYWHTAAAILT
Trigger: CGTGAGGATGGCGGCCGCAGTATGCCAGTATTGCATACAATCGCATAATCCCACTGCCCGAGACATCATGCAGACAGCCCTCATAAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CCA 90 bp TCCACAGCAAGCATCGTGTGGATCAGGGTCTTATTTACCCGGAGGTaGTTGAGGAGTATACACGCCTGCTCCTCAGTGGCCTGGTTGTTC +
Preference number: 5 (lower is better)
Translates to: STASIVWIRVLFTRR*LRSIHACSSVAWLF
Trigger: GAACAACCAGGCCACTGAGGAGCAGGCGTGTATACTCCTCAACCACCTCCGGGTAAATAAGACCCTGATCCACACGATGCTTGCTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS TCA 90 bp TGTTTCTTCCGCCTCCAGCATTTTGAGGAGCTCCAAGTCACTGGATaGAGTGAGCTCATCCCTAATGTGGCTCCAGTCGTACTGCTGGCG +
Preference number: 5 (lower is better)
Translates to: CFFRLQHFEELQVTG*SELIPNVAPVVLLA
Trigger: CGCCAGCAGTACGACTGGAGCCACATTAGGGATGAGCTCACTTCATCCAGTGACTTGGAGCTCCTCAAAATGCTGGAGGCGGAAGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS GCA 90 bp GCTGCGGCCCAGCTGTCCACACTGTTACCCTTTATGAGGGCTGTCTaGATGATGTCTCGGGCAGTGGGATTATGCGATTGTATGCAATAC +
Preference number: 5 (lower is better)
Translates to: AAAQLSTLLPFMRAV*MMSRAVGLCDCMQY
Trigger: GTATTGCATACAATCGCATAATCCCACTGCCCGAGACATCATGCAGACAGCCCTCATAAAGGGTAACAGTGTGGACAGCTGGGCCGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS GCA 90 bp ATCAGGGTCTTATTTACCCGGAGGTGGTTGAGGAGTATACACGCCTaGTCCTCAGTGGCCTGGTTGTTCTTGTGGAAAAGCTGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: IRVLFTRRWLRSIHA*SSVAWLFLWKSWWR
Trigger: CCTCCACCAGCTTTTCCACAAGAACAACCAGGCCACTGAGGAGCAGGCGTGTATACTCCTCAACCACCTCCGGGTAAATAAGACCCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CCA 90 bp TTGAGGAGCTCCAAGTCACTGGATGAAGTGAGCTCATCCCTAATGTaGCTCCAGTCGTACTGCTGGCGGAGAAAGGACTGCCACTTGTTG +
Preference number: 5 (lower is better)
Translates to: LRSSKSLDEVSSSLM*LQSYCWRRKDCHLL
Trigger: CAACAAGTGGCAGTCCTTTCTCCGCCAGCAGTACGACTGGAGCCACATTAGGGATGAGCTCACTTCATCCAGTGACTTGGAGCTCCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CCA 90 bp CGGTCCTTCCATTGCCTGCTGTTCAGCTCCACAGCAAGCATCGTGTaGATCAGGGTCTTATTTACCCGGAGGTGGTTGAGGAGTATACAC +
Preference number: 5 (lower is better)
Translates to: RSFHCLLFSSTASIV*IRVLFTRRWLRSIH
Trigger: GTGTATACTCCTCAACCACCTCCGGGTAAATAAGACCCTGATCCACACGATGCTTGCTGTGGAGCTGAACAGCAGGCAATGGAAGGACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS TCA 90 bp TCATCCGGAGAGGCTGACAGCTCCAGGGTTTCTGGCTTTAAGTTGTaGTGGCGGCTTTGTCCAGGAAATGCTTTCTGCTCTGTGTCTCTG +
Preference number: 5 (lower is better)
Translates to: SSGEADSSRVSGFKL*WRLCPGNAFCSVSL
Trigger: CAGAGACACAGAGCAGAAAGCATTTCCTGGACAAAGCCGCCATCACAACTTAAAGCCAGAAACCCTGGAGCTGTCAGCCTCTCCGGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS TCA 90 bp CGCTCCTGGGAATTTCCTTGGCACAGCTTAACTCTGATCATGTCATaGATCTCTTTGCCAAGGTTCATTCGCCCCAGGGCTTTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: RSWEFPWHSLTLIMS*ISLPRFIRPRALAA
Trigger: GGCTGCCAAAGCCCTGGGGCGAATGAACCTTGGCAAAGAGATTCATGACATGATCAGAGTTAAGCTGTGCCAAGGAAATTCCCAGGAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CCA 90 bp GCGATTGTATGCAATACTGGCATACTGCGGCCGCCATCCTCACGTTaGGATTTCTGTGAGAAAGAGCATCCTCTAGAACAGGCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: AIVCNTGILRPPSSR*DFCEKEHPLEQAGG
Trigger: TCCTCCTGCCTGTTCTAGAGGATGCTCTTTCTCACAGAAATCCCAACGTGAGGATGGCGGCCGCAGTATGCCAGTATTGCATACAATCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS GCA 90 bp TGGAAGCTCCACTTCTCTGGGGTTTCCGGGAAGACCTTGGTTAGGTaGTTGTCATACCGATTGAGGTTTTCCAGGACAATCTGGTCTTTC +
Preference number: 5 (lower is better)
Translates to: WKLHFSGVSGKTLVR*LSYRLRFSRTIWSF
Trigger: GAAAGACCAGATTGTCCTGGAAAACCTCAATCGGTATGACAAGCACCTAACCAAGGTCTTCCCGGAAACCCCAGAGAAGTGGAGCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CCA 90 bp CTGTCGAATTCCTGTGAACTCATCAGAGAAGCAGGTCAGGAAGCTTaGAAGAAGCTTGGCTGTCATGAGTTTGAGCACACGGATCAGCGA +
Preference number: 5 (lower is better)
Translates to: LSNSCELIREAGQEA*KKLGCHEFEHTDQR
Trigger: TCGCTGATCCGTGTGCTCAAACTCATGACAGCCAAGCTTCTTCCAAGCTTCCTGACCTGCTTCTCTGATGAGTTCACAGGAATTCGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS GCA 90 bp ATCTCTTTGCCAAGGTTCATTCGCCCCAGGGCTTTGGCAGCCGATTaGCTTACTTCCTTGTTCCAGTCATTCCACATCAGCTGGATTATT +
Preference number: 5 (lower is better)
Translates to: ISLPRFIRPRALAAD*LTSLFQSFHISWII
Trigger: AATAATCCAGCTGATGTGGAATGACTGGAACAAGGAAGTAAGGCAATCGGCTGCCAAAGCCCTGGGGCGAATGAACCTTGGCAAAGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CCA 90 bp TCATGTCATGAATCTCTTTGCCAAGGTTCATTCGCCCCAGGGCTTTaGCAGCCGATTGCCTTACTTCCTTGTTCCAGTCATTCCACATCA +
Preference number: 5 (lower is better)
Translates to: SCHESLCQGSFAPGL*QPIALLPCSSHSTS
Trigger: TGATGTGGAATGACTGGAACAAGGAAGTAAGGCAATCGGCTGCCAAAGCCCTGGGGCGAATGAACCTTGGCAAAGAGATTCATGACATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS TCA 90 bp TGGATTATTTTCTGTTTCATATCTATGCAGACTTTTCCAGTGATCTaGGAGAAAGCACGGCAGGCCACGATGCGGTCCTTCCATTGCCTG +
Preference number: 5 (lower is better)
Translates to: WIIFCFISMQTFPVI*EKARQATMRSFHCL
Trigger: CAGGCAATGGAAGGACCGCATCGTGGCCTGCCGTGCTTTCTCTCAGATCACTGGAAAAGTCTGCATAGATATGAAACAGAAAATAATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS TCA 90 bp TCAGCTGGATTATTTTCTGTTTCATATCTATGCAGACTTTTCCAGTaGTCTGAGAGAAAGCACGGCAGGCCACGATGCGGTCCTTCCATT +
Preference number: 5 (lower is better)
Translates to: SAGLFSVSYLCRLFQ*SERKHGRPRCGPSI
Trigger: AATGGAAGGACCGCATCGTGGCCTGCCGTGCTTTCTCTCAGATCACTGGAAAAGTCTGCATAGATATGAAACAGAAAATAATCCAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CCA 72 bp GGACTGCCACTTGTTGGGCGACTGTCCGGGCCTCGGTaGCCGCTTGCTCTGGATCCATCGAGAGGTGCGCTT +
Preference number: 6 (lower is better)
Translates to: GLPLVGRLSGPR*PLALDPSRGAL
Trigger: AAGCGCACCTCTCGATGGATCCAGAGCAAGCGGCCACCGAGGCCCGGACAGTCGCCCAACAAGTGGCAGTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CAA 72 bp CAGTCGTACTGCTGGCGGAGAAAGGACTGCCACTTGTaGGGCGACTGTCCGGGCCTCGGTGGCCGCTTGCTC +
Preference number: 6 (lower is better)
Translates to: QSYCWRRKDCHL*GDCPGLGGRLL
Trigger: GAGCAAGCGGCCACCGAGGCCCGGACAGTCGCCCAACAAGTGGCAGTCCTTTCTCCGCCAGCAGTACGACTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CAA 72 bp CTCCAGTCGTACTGCTGGCGGAGAAAGGACTGCCACTaGTTGGGCGACTGTCCGGGCCTCGGTGGCCGCTTG +
Preference number: 6 (lower is better)
Translates to: LQSYCWRRKDCH*LGDCPGLGGRL
Trigger: CAAGCGGCCACCGAGGCCCGGACAGTCGCCCAACAAGTGGCAGTCCTTTCTCCGCCAGCAGTACGACTGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CAA 90 bp CCGGGCCTCGGTGGCCGCTTGCTCTGGATCCATCGAGAGGTGCGCTaGTCCAGTTTCTCCAGAACAATGGCTTCCCAGCCTCGCGCCTCC +
Preference number: 6 (lower is better)
Translates to: PGLGGRLLWIHREVR*SSFSRTMASQPRAS
Trigger: GGAGGCGCGAGGCTGGGAAGCCATTGTTCTGGAGAAACTGGACAAGCGCACCTCTCGATGGATCCAGAGCAAGCGGCCACCGAGGCCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS TCA 72 bp AGCACATCCAGGAAGGTGTCCCTGACCTGGGCGCCGTaGAGCTTGAGGGCTAGGATGCTCCGGCAGGCTTCC +
Preference number: 6 (lower is better)
Translates to: STSRKVSLTWAP*SLRARMLRQAS
Trigger: GGAAGCCTGCCGGAGCATCCTAGCCCTCAAGCTTCACGGCGCCCAGGTCAGGGACACCTTCCTGGATGTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS GCA 72 bp CAGCCTTGTCCGTGGGTCTTGAGTGGAGGAAGACCATaGCCCATCCTAGCCGAGGGGGCTGTGGCTCAAGGC +
Preference number: 6 (lower is better)
Translates to: QPCPWVLSGGRP*PILAEGAVAQG
Trigger: GCCTTGAGCCACAGCCCCCTCGGCTAGGATGGGGCATGGTCTTCCTCCACTCAAGACCCACGGACAAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS GCA 72 bp ATGTGGCTCCAGTCGTACTGCTGGCGGAGAAAGGACTaGCACTTGTTGGGCGACTGTCCGGGCCTCGGTGGC +
Preference number: 6 (lower is better)
Translates to: MWLQSYCWRRKD*HLLGDCPGLGG
Trigger: GCCACCGAGGCCCGGACAGTCGCCCAACAAGTGGCAGTCCTTTCTCCGCCAGCAGTACGACTGGAGCCACAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CCA 72 bp ACTGAGGCACACCCAGCCTTGTCCGTGGGTCTTGAGTaGAGGAAGACCATGCCCCATCCTAGCCGAGGGGGC +
Preference number: 6 (lower is better)
Translates to: TEAHPALSVGLE*RKTMPHPSRGG
Trigger: GCCCCCTCGGCTAGGATGGGGCATGGTCTTCCTCCACTCAAGACCCACGGACAAGGCTGGGTGTGCCTCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CCA 72 bp AGTCGTACTGCTGGCGGAGAAAGGACTGCCACTTGTTaGGCGACTGTCCGGGCCTCGGTGGCCGCTTGCTCT +
Preference number: 6 (lower is better)
Translates to: SRTAGGERTATC*ATVRASVAACS
Trigger: AGAGCAAGCGGCCACCGAGGCCCGGACAGTCGCCCAACAAGTGGCAGTCCTTTCTCCGCCAGCAGTACGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CAA 72 bp CACTTGTTGGGCGACTGTCCGGGCCTCGGTGGCCGCTaGCTCTGGATCCATCGAGAGGTGCGCTTGTCCAGT +
Preference number: 6 (lower is better)
Translates to: HLLGDCPGLGGR*LWIHREVRLSS
Trigger: ACTGGACAAGCGCACCTCTCGATGGATCCAGAGCAAGCGGCCACCGAGGCCCGGACAGTCGCCCAACAAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS GCA 72 bp ACTTGTTGGGCGACTGTCCGGGCCTCGGTGGCCGCTTaGTCTGGATCCATCGAGAGGTGCGCTTGTCCAGTT +
Preference number: 6 (lower is better)
Translates to: TCWATVRASVAA*SGSIERCACPV
Trigger: AACTGGACAAGCGCACCTCTCGATGGATCCAGAGCAAGCGGCCACCGAGGCCCGGACAGTCGCCCAACAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CCA 72 bp AGGAAGTCTTCCACTCCTGCAGCATCCTCCGCAGGATaGCCAGCTCCCACGGCACATCCTCCTCCACGGGTT +
Preference number: 6 (lower is better)
Translates to: RKSSTPAASSAG*PAPTAHPPPRV
Trigger: AACCCGTGGAGGAGGATGTGCCGTGGGAGCTGGCCATCCTGCGGAGGATGCTGCAGGAGTGGAAGACTTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CAA 90 bp AAGGACTGCCACTTGTTGGGCGACTGTCCGGGCCTCGGTGGCCGCTaGCTCTGGATCCATCGAGAGGTGCGCTTGTCCAGTTTCTCCAGA +
Preference number: 6 (lower is better)
Translates to: KDCHLLGDCPGLGGR*LWIHREVRLSSFSR
Trigger: TCTGGAGAAACTGGACAAGCGCACCTCTCGATGGATCCAGAGCAAGCGGCCACCGAGGCCCGGACAGTCGCCCAACAAGTGGCAGTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CCA 72 bp TGGCAGACGTGGCCTCCTTACCTACCTGCAGCAGGCTaGCCTCAGTTGGCAATGCAGTCCAACGCTGGACTC +
Preference number: 6 (lower is better)
Translates to: WQTWPPYLPAAG*PQLAMQSNAGL
Trigger: GAGTCCAGCGTTGGACTGCATTGCCAACTGAGGCCAGCCTGCTGCAGGTAGGTAAGGAGGCCACGTCTGCCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS GCA 72 bp GCCTCGGTGGCCGCTTGCTCTGGATCCATCGAGAGGTaGGCTTGTCCAGTTTCTCCAGAACAATGGCTTCCC +
Preference number: 6 (lower is better)
Translates to: ASVAACSGSIER*ACPVSPEQWLP
Trigger: GGGAAGCCATTGTTCTGGAGAAACTGGACAAGCGCACCTCTCGATGGATCCAGAGCAAGCGGCCACCGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS GCA 72 bp AGCTCCCACGGCACATCCTCCTCCACGGGTTGGACCTaGTTCTTTTGTCTCCTTGTCTTGGCAGACGTGGCC +
Preference number: 6 (lower is better)
Translates to: SSHGTSSSTGWT*FFCLLVLADVA
Trigger: GGCCACGTCTGCCAAGACAAGGAGACAAAAGAAGCAGGTCCAACCCGTGGAGGAGGATGTGCCGTGGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS GCA 72 bp GAGAAAGCACGGCAGGCCACGATGCGGTCCTTCCATTaGCTGCTGTTCAGCTCCACAGCAAGCATCGTGTGG +
Preference number: 6 (lower is better)
Translates to: EKARQATMRSFH*LLFSSTASIVW
Trigger: CCACACGATGCTTGCTGTGGAGCTGAACAGCAGGCAATGGAAGGACCGCATCGTGGCCTGCCGTGCTTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CCA 72 bp GGCCTCCTTACCTACCTGCAGCAGGCTGGCCTCAGTTaGCAATGCAGTCCAACGCTGGACTCCTTTCCTGAG +
Preference number: 6 (lower is better)
Translates to: GLLTYLQQAGLS*QCSPTLDSFPE
Trigger: CTCAGGAAAGGAGTCCAGCGTTGGACTGCATTGCCAACTGAGGCCAGCCTGCTGCAGGTAGGTAAGGAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CAA 90 bp ACGGCACATCCTCCTCCACGGGTTGGACCTGCTTCTTTTGTCTCCTaGTCTTGGCAGACGTGGCCTCCTTACCTACCTGCAGCAGGCTGG +
Preference number: 6 (lower is better)
Translates to: TAHPPPRVGPASFVS*SWQTWPPYLPAAGW
Trigger: CCAGCCTGCTGCAGGTAGGTAAGGAGGCCACGTCTGCCAAGACAAGGAGACAAAAGAAGCAGGTCCAACCCGTGGAGGAGGATGTGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CAA 90 bp CAGCTCCCACGGCACATCCTCCTCCACGGGTTGGACCTGCTTCTTTaGTCTCCTTGTCTTGGCAGACGTGGCCTCCTTACCTACCTGCAG +
Preference number: 6 (lower is better)
Translates to: QLPRHILLHGLDLLL*SPCLGRRGLLTYLQ
Trigger: CTGCAGGTAGGTAAGGAGGCCACGTCTGCCAAGACAAGGAGACAAAAGAAGCAGGTCCAACCCGTGGAGGAGGATGTGCCGTGGGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CAA 90 bp ACATCCTCCTCCACGGGTTGGACCTGCTTCTTTTGTCTCCTTGTCTaGGCAGACGTGGCCTCCTTACCTACCTGCAGCAGGCTGGCCTCA +
Preference number: 6 (lower is better)
Translates to: TSSSTGWTCFFCLLV*ADVASLPTCSRLAS
Trigger: TGAGGCCAGCCTGCTGCAGGTAGGTAAGGAGGCCACGTCTGCCAAGACAAGGAGACAAAAGAAGCAGGTCCAACCCGTGGAGGAGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS GCA 72 bp CTCCTTGTCTTGGCAGACGTGGCCTCCTTACCTACCTaGAGCAGGCTGGCCTCAGTTGGCAATGCAGTCCAA +
Preference number: 6 (lower is better)
Translates to: LLVLADVASLPT*SRLASVGNAVQ
Trigger: TTGGACTGCATTGCCAACTGAGGCCAGCCTGCTGCAGGTAGGTAAGGAGGCCACGTCTGCCAAGACAAGGAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS GCA 72 bp AAGCACGGCAGGCCACGATGCGGTCCTTCCATTGCCTaGTGTTCAGCTCCACAGCAAGCATCGTGTGGATCA +
Preference number: 6 (lower is better)
Translates to: KHGRPRCGPSIA*CSAPQQASCGS
Trigger: TGATCCACACGATGCTTGCTGTGGAGCTGAACAGCAGGCAATGGAAGGACCGCATCGTGGCCTGCCGTGCTT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CCA 72 bp GTACTCTGGAGACTGAGGCACACCCAGCCTTGTCCGTaGGTCTTGAGTGGAGGAAGACCATGCCCCATCCTA +
Preference number: 6 (lower is better)
Translates to: VLWRLRHTQPCP*VLSGGRPCPIL
Trigger: TAGGATGGGGCATGGTCTTCCTCCACTCAAGACCCACGGACAAGGCTGGGTGTGCCTCAGTCTCCAGAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CCA 72 bp TGGGTCTTGAGTCTCTCGCAGTGCCGTGGGCTGAAGTaGAAGACAGGTGGTACTCTGGAGACTGAGGCACAC +
Preference number: 6 (lower is better)
Translates to: WVLSLSQCRGLK*KTGGTLETEAH
Trigger: GTGTGCCTCAGTCTCCAGAGTACCACCTGTCTTCCACTTCAGCCCACGGCACTGCGAGAGACTCAAGACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CCA 72 bp GGACCTGCTTCTTTTGTCTCCTTGTCTTGGCAGACGTaGCCTCCTTACCTACCTGCAGCAGGCTGGCCTCAG +
Preference number: 6 (lower is better)
Translates to: GPASFVSLSWQT*PPYLPAAGWPQ
Trigger: CTGAGGCCAGCCTGCTGCAGGTAGGTAAGGAGGCCACGTCTGCCAAGACAAGGAGACAAAAGAAGCAGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CCA 72 bp CCACGGGTTGGACCTGCTTCTTTTGTCTCCTTGTCTTaGCAGACGTGGCCTCCTTACCTACCTGCAGCAGGC +
Preference number: 6 (lower is better)
Translates to: PRVGPASFVSLS*QTWPPYLPAAG
Trigger: GCCTGCTGCAGGTAGGTAAGGAGGCCACGTCTGCCAAGACAAGGAGACAAAAGAAGCAGGTCCAACCCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CAA 72 bp GGTGGCCGCTTGCTCTGGATCCATCGAGAGGTGCGCTaGTCCAGTTTCTCCAGAACAATGGCTTCCCAGCCT +
Preference number: 6 (lower is better)
Translates to: GGRLLWIHREVR*SSFSRTMASQP
Trigger: AGGCTGGGAAGCCATTGTTCTGGAGAAACTGGACAAGCGCACCTCTCGATGGATCCAGAGCAAGCGGCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CAA 90 bp AGTGATCTGAGAGAAAGCACGGCAGGCCACGATGCGGTCCTTCCATaGCCTGCTGTTCAGCTCCACAGCAAGCATCGTGTGGATCAGGGT +
Preference number: 6 (lower is better)
Translates to: SDLRESTAGHDAVLP*PAVQLHSKHRVDQG
Trigger: ACCCTGATCCACACGATGCTTGCTGTGGAGCTGAACAGCAGGCAATGGAAGGACCGCATCGTGGCCTGCCGTGCTTTCTCTCAGATCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS GCA 72 bp GAAGTGAGCTCATCCCTAATGTGGCTCCAGTCGTACTaGTGGCGGAGAAAGGACTGCCACTTGTTGGGCGAC +
Preference number: 6 (lower is better)
Translates to: EVSSSLMWLQSY*WRRKDCHLLGD
Trigger: GTCGCCCAACAAGTGGCAGTCCTTTCTCCGCCAGCAGTACGACTGGAGCCACATTAGGGATGAGCTCACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CCA 72 bp GTGAGCTCATCCCTAATGTGGCTCCAGTCGTACTGCTaGCGGAGAAAGGACTGCCACTTGTTGGGCGACTGT +
Preference number: 6 (lower is better)
Translates to: VSSSLMWLQSYC*RRKDCHLLGDC
Trigger: ACAGTCGCCCAACAAGTGGCAGTCCTTTCTCCGCCAGCAGTACGACTGGAGCCACATTAGGGATGAGCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CAA 72 bp TCCACGGGTTGGACCTGCTTCTTTTGTCTCCTTGTCTaGGCAGACGTGGCCTCCTTACCTACCTGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: STGWTCFFCLLV*ADVASLPTCSR
Trigger: CCTGCTGCAGGTAGGTAAGGAGGCCACGTCTGCCAAGACAAGGAGACAAAAGAAGCAGGTCCAACCCGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CAA 72 bp CCTCCTCCACGGGTTGGACCTGCTTCTTTTGTCTCCTaGTCTTGGCAGACGTGGCCTCCTTACCTACCTGCA +
Preference number: 6 (lower is better)
Translates to: PPPRVGPASFVS*SWQTWPPYLPA
Trigger: TGCAGGTAGGTAAGGAGGCCACGTCTGCCAAGACAAGGAGACAAAAGAAGCAGGTCCAACCCGTGGAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS TCA 72 bp CATACTGCGGCCGCCATCCTCACGTTGGGATTTCTGTaGGAAAGAGCATCCTCTAGAACAGGCAGGAGGACC +
Preference number: 6 (lower is better)
Translates to: HTAAAILTLGFL*ERASSRTGRRT
Trigger: GGTCCTCCTGCCTGTTCTAGAGGATGCTCTTTCTCACAGAAATCCCAACGTGAGGATGGCGGCCGCAGTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS TCA 72 bp TCGTGTGGATCAGGGTCTTATTTACCCGGAGGTGGTTaGGGAGTATACACGCCTGCTCCTCAGTGGCCTGGT +
Preference number: 6 (lower is better)
Translates to: SCGSGSYLPGGG*GVYTPAPQWPG
Trigger: ACCAGGCCACTGAGGAGCAGGCGTGTATACTCCTCAACCACCTCCGGGTAAATAAGACCCTGATCCACACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS GCA 72 bp AGGGCTGTCTGCATGATGTCTCGGGCAGTGGGATTATaGGATTGTATGCAATACTGGCATACTGCGGCCGCC +
Preference number: 6 (lower is better)
Translates to: RAVCMMSRAVGL*DCMQYWHTAAA
Trigger: GGCGGCCGCAGTATGCCAGTATTGCATACAATCGCATAATCCCACTGCCCGAGACATCATGCAGACAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CCA 72 bp GAGAAGGAAAGGTTGGCCGCTGCCCTTTTCAAATACTaGGTCTTGAGTCTCTCGCAGTGCCGTGGGCTGAAG +
Preference number: 6 (lower is better)
Translates to: EKERLAAALFKY*VLSLSQCRGLK
Trigger: CTTCAGCCCACGGCACTGCGAGAGACTCAAGACCCAGTATTTGAAAAGGGCAGCGGCCAACCTTTCCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CCA 72 bp ATACACGCCTGCTCCTCAGTGGCCTGGTTGTTCTTGTaGAAAAGCTGGTGGAGGATCCTCTTGATCACCGGG +
Preference number: 6 (lower is better)
Translates to: IHACSSVAWLFL*KSWWRILLITG
Trigger: CCCGGTGATCAAGAGGATCCTCCACCAGCTTTTCCACAAGAACAACCAGGCCACTGAGGAGCAGGCGTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CCA 72 bp AGCATCGTGTGGATCAGGGTCTTATTTACCCGGAGGTaGTTGAGGAGTATACACGCCTGCTCCTCAGTGGCC +
Preference number: 6 (lower is better)
Translates to: SIVWIRVLFTRR*LRSIHACSSVA
Trigger: GGCCACTGAGGAGCAGGCGTGTATACTCCTCAACCACCTCCGGGTAAATAAGACCCTGATCCACACGATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CAA 90 bp TATGAGGGCTGTCTGCATGATGTCTCGGGCAGTGGGATTATGCGATaGTATGCAATACTGGCATACTGCGGCCGCCATCCTCACGTTGGG +
Preference number: 6 (lower is better)
Translates to: YEGCLHDVSGSGIMR*YAILAYCGRHPHVG
Trigger: CCCAACGTGAGGATGGCGGCCGCAGTATGCCAGTATTGCATACAATCGCATAATCCCACTGCCCGAGACATCATGCAGACAGCCCTCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CAA 90 bp GAGAAGCAGGTCAGGAAGCTTGGAAGAAGCTTGGCTGTCATGAGTTaGAGCACACGGATCAGCGAGAGGGCCTTAATCCGCTCCTGGGAA +
Preference number: 6 (lower is better)
Translates to: EKQVRKLGRSLAVMS*STRISERALIRSWE
Trigger: TTCCCAGGAGCGGATTAAGGCCCTCTCGCTGATCCGTGTGCTCAAACTCATGACAGCCAAGCTTCTTCCAAGCTTCCTGACCTGCTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS GCA 72 bp CTTACCTACCTGCAGCAGGCTGGCCTCAGTTGGCAATaGAGTCCAACGCTGGACTCCTTTCCTGAGTTTGTA +
Preference number: 6 (lower is better)
Translates to: LTYLQQAGLSWQ*SPTLDSFPEFV
Trigger: TACAAACTCAGGAAAGGAGTCCAGCGTTGGACTGCATTGCCAACTGAGGCCAGCCTGCTGCAGGTAGGTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS GCA 72 bp CCAAGGTTCATTCGCCCCAGGGCTTTGGCAGCCGATTaGCTTACTTCCTTGTTCCAGTCATTCCACATCAGC +
Preference number: 6 (lower is better)
Translates to: PRFIRPRALAAD*LTSLFQSFHIS
Trigger: GCTGATGTGGAATGACTGGAACAAGGAAGTAAGGCAATCGGCTGCCAAAGCCCTGGGGCGAATGAACCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS GCA 72 bp GTCACGGATCTGCAAGGCACCTGCCGCCAAACAAGCTaGCTGTCGAATTCCTGTGAACTCATCAGAGAAGCA +
Preference number: 6 (lower is better)
Translates to: VTDLQGTCRQTS*LSNSCELIREA
Trigger: TGCTTCTCTGATGAGTTCACAGGAATTCGACAGGCAGCTTGTTTGGCGGCAGGTGCCTTGCAGATCCGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CCA 72 bp CATTGCCTGCTGTTCAGCTCCACAGCAAGCATCGTGTaGATCAGGGTCTTATTTACCCGGAGGTGGTTGAGG +
Preference number: 6 (lower is better)
Translates to: HCLLFSSTASIV*IRVLFTRRWLR
Trigger: CCTCAACCACCTCCGGGTAAATAAGACCCTGATCCACACGATGCTTGCTGTGGAGCTGAACAGCAGGCAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CAA 72 bp GCCAAGGTTCATTCGCCCCAGGGCTTTGGCAGCCGATaGCCTTACTTCCTTGTTCCAGTCATTCCACATCAG +
Preference number: 6 (lower is better)
Translates to: AKVHSPQGFGSR*PYFLVPVIPHQ
Trigger: CTGATGTGGAATGACTGGAACAAGGAAGTAAGGCAATCGGCTGCCAAAGCCCTGGGGCGAATGAACCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CAA 72 bp GTCAGGAAGCTTGGAAGAAGCTTGGCTGTCATGAGTTaGAGCACACGGATCAGCGAGAGGGCCTTAATCCGC +
Preference number: 6 (lower is better)
Translates to: VRKLGRSLAVMS*STRISERALIR
Trigger: GCGGATTAAGGCCCTCTCGCTGATCCGTGTGCTCAAACTCATGACAGCCAAGCTTCTTCCAAGCTTCCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CAA 90 bp ACAGCAAGCATCGTGTGGATCAGGGTCTTATTTACCCGGAGGTGGTaGAGGAGTATACACGCCTGCTCCTCAGTGGCCTGGTTGTTCTTG +
Preference number: 6 (lower is better)
Translates to: TASIVWIRVLFTRRW*RSIHACSSVAWLFL
Trigger: CAAGAACAACCAGGCCACTGAGGAGCAGGCGTGTATACTCCTCAACCACCTCCGGGTAAATAAGACCCTGATCCACACGATGCTTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CCA 72 bp TTTCAAATACTGGGTCTTGAGTCTCTCGCAGTGCCGTaGGCTGAAGTGGAAGACAGGTGGTACTCTGGAGAC +
Preference number: 6 (lower is better)
Translates to: FQILGLESLAVP*AEVEDRWYSGD
Trigger: GTCTCCAGAGTACCACCTGTCTTCCACTTCAGCCCACGGCACTGCGAGAGACTCAAGACCCAGTATTTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CCA 72 bp AGCACACGGATCAGCGAGAGGGCCTTAATCCGCTCCTaGGAATTTCCTTGGCACAGCTTAACTCTGATCATG +
Preference number: 6 (lower is better)
Translates to: STRISERALIRS*EFPWHSLTLIM
Trigger: CATGATCAGAGTTAAGCTGTGCCAAGGAAATTCCCAGGAGCGGATTAAGGCCCTCTCGCTGATCCGTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CAA 72 bp TGTCTGCATGATGTCTCGGGCAGTGGGATTATGCGATaGTATGCAATACTGGCATACTGCGGCCGCCATCCT +
Preference number: 6 (lower is better)
Translates to: CLHDVSGSGIMR*YAILAYCGRHP
Trigger: AGGATGGCGGCCGCAGTATGCCAGTATTGCATACAATCGCATAATCCCACTGCCCGAGACATCATGCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CAA 72 bp TTGAGGAGTATACACGCCTGCTCCTCAGTGGCCTGGTaGTTCTTGTGGAAAAGCTGGTGGAGGATCCTCTTG +
Preference number: 6 (lower is better)
Translates to: LRSIHACSSVAW*FLWKSWWRILL
Trigger: CAAGAGGATCCTCCACCAGCTTTTCCACAAGAACAACCAGGCCACTGAGGAGCAGGCGTGTATACTCCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CAA 90 bp GGAATGGGCTGGAAGCTCCACTTCTCTGGGGTTTCCGGGAAGACCTaGGTTAGGTGCTTGTCATACCGATTGAGGTTTTCCAGGACAATC +
Preference number: 6 (lower is better)
Translates to: GMGWKLHFSGVSGKT*VRCLSYRLRFSRTI
Trigger: GATTGTCCTGGAAAACCTCAATCGGTATGACAAGCACCTAACCAAGGTCTTCCCGGAAACCCCAGAGAAGTGGAGCTTCCAGCCCATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS TCA 72 bp GAGGCTGACAGCTCCAGGGTTTCTGGCTTTAAGTTGTaGTGGCGGCTTTGTCCAGGAAATGCTTTCTGCTCT +
Preference number: 6 (lower is better)
Translates to: EADSSRVSGFKL*WRLCPGNAFCS
Trigger: AGAGCAGAAAGCATTTCCTGGACAAAGCCGCCATCACAACTTAAAGCCAGAAACCCTGGAGCTGTCAGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS TCA 72 bp TCCAGGACAATCTGGTCTTTCCTCCCGCCAATCTGGTaGACAATCCTCACTCCGTCAAAGTACATCTCCTGC +
Preference number: 6 (lower is better)
Translates to: SRTIWSFLPPIW*TILTPSKYISC
Trigger: GCAGGAGATGTACTTTGACGGAGTGAGGATTGTTCACCAGATTGGCGGGAGGAAAGACCAGATTGTCCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS TCA 72 bp CAGTTGGCAATGCAGTCCAACGCTGGACTCCTTTCCTaGGTTTGTAAGGCATTTCAGGAATGGGCTGGAAGC +
Preference number: 6 (lower is better)
Translates to: QLAMQSNAGLLS*VCKAFQEWAGS
Trigger: GCTTCCAGCCCATTCCTGAAATGCCTTACAAACTCAGGAAAGGAGTCCAGCGTTGGACTGCATTGCCAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CCA 72 bp TGCAATACTGGCATACTGCGGCCGCCATCCTCACGTTaGGATTTCTGTGAGAAAGAGCATCCTCTAGAACAG +
Preference number: 6 (lower is better)
Translates to: CNTGILRPPSSR*DFCEKEHPLEQ
Trigger: CTGTTCTAGAGGATGCTCTTTCTCACAGAAATCCCAACGTGAGGATGGCGGCCGCAGTATGCCAGTATTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CAA 72 bp CCCATAAACTCGGCTGTTTCTTCCGCCTCCAGCATTTaGAGGAGCTCCAAGTCACTGGATGAAGTGAGCTCA +
Preference number: 6 (lower is better)
Translates to: PINSAVSSASSI*RSSKSLDEVSS
Trigger: TGAGCTCACTTCATCCAGTGACTTGGAGCTCCTCAAAATGCTGGAGGCGGAAGAAACAGCCGAGTTTATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CAA 72 bp CTTATCTCTGCTTGGATAACCTCGGCTGTCATGTTGTaGCCGGACATGGCTTCAGCTGTGTGTACTTGTGGG +
Preference number: 6 (lower is better)
Translates to: LISAWITSAVML*PDMASAVCTCG
Trigger: CCCACAAGTACACACAGCTGAAGCCATGTCCGGCAACAACATGACAGCCGAGGTTATCCAAGCAGAGATAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CAA 90 bp AAGCTCCACTTCTCTGGGGTTTCCGGGAAGACCTTGGTTAGGTGCTaGTCATACCGATTGAGGTTTTCCAGGACAATCTGGTCTTTCCTC +
Preference number: 6 (lower is better)
Translates to: KLHFSGVSGKTLVRC*SYRLRFSRTIWSFL
Trigger: GAGGAAAGACCAGATTGTCCTGGAAAACCTCAATCGGTATGACAAGCACCTAACCAAGGTCTTCCCGGAAACCCCAGAGAAGTGGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CAA 90 bp CACACGGATCAGCGAGAGGGCCTTAATCCGCTCCTGGGAATTTCCTaGGCACAGCTTAACTCTGATCATGTCATGAATCTCTTTGCCAAG +
Preference number: 6 (lower is better)
Translates to: HTDQREGLNPLLGIS*AQLNSDHVMNLFAK
Trigger: CTTGGCAAAGAGATTCATGACATGATCAGAGTTAAGCTGTGCCAAGGAAATTCCCAGGAGCGGATTAAGGCCCTCTCGCTGATCCGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS GCA 72 bp CACTTCTCTGGGGTTTCCGGGAAGACCTTGGTTAGGTaGTTGTCATACCGATTGAGGTTTTCCAGGACAATC +
Preference number: 6 (lower is better)
Translates to: HFSGVSGKTLVR*LSYRLRFSRTI
Trigger: GATTGTCCTGGAAAACCTCAATCGGTATGACAAGCACCTAACCAAGGTCTTCCCGGAAACCCCAGAGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CAA 72 bp TTCTCTGGGGTTTCCGGGAAGACCTTGGTTAGGTGCTaGTCATACCGATTGAGGTTTTCCAGGACAATCTGG +
Preference number: 6 (lower is better)
Translates to: FSGVSGKTLVRC*SYRLRFSRTIW
Trigger: CCAGATTGTCCTGGAAAACCTCAATCGGTATGACAAGCACCTAACCAAGGTCTTCCCGGAAACCCCAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CAA 72 bp CAGCGAGAGGGCCTTAATCCGCTCCTGGGAATTTCCTaGGCACAGCTTAACTCTGATCATGTCATGAATCTC +
Preference number: 6 (lower is better)
Translates to: QREGLNPLLGIS*AQLNSDHVMNL
Trigger: GAGATTCATGACATGATCAGAGTTAAGCTGTGCCAAGGAAATTCCCAGGAGCGGATTAAGGCCCTCTCGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS CAA 90 bp AATCTCTTTGCCAAGGTTCATTCGCCCCAGGGCTTTGGCAGCCGATaGCCTTACTTCCTTGTTCCAGTCATTCCACATCAGCTGGATTAT +
Preference number: 6 (lower is better)
Translates to: NLFAKVHSPQGFGSR*PYFLVPVIPHQLDY
Trigger: ATAATCCAGCTGATGTGGAATGACTGGAACAAGGAAGTAAGGCAATCGGCTGCCAAAGCCCTGGGGCGAATGAACCTTGGCAAAGAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3
CDS TCA 72 bp CTTTGTATGCCCCGTAGTAGGTTCTCCACTGTCTCGTaGTACCATTCAATAATCAGTCCCCAGGAAGTCTTC +
Preference number: 6 (lower is better)
Translates to: LCMPRSRFSTVS*YHSIISPQEVF
Trigger: GAAGACTTCCTGGGGACTGATTATTGAATGGTATCACGAGACAGTGGAGAACCTACTACGGGGCATACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164935.3