Pregenerated sensors for HEATR3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031657Ensembl transcript IDs: ENSMUST00000034079.14, ENSMUST00000121949.2
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACATTCAAACTAACACGGAGAACAGAGGCAGTGAAAGAAGGCTTTTaGAGGTCAGGTGTGGTGTTGAATACCTTAAAGCCCAGCAATCAG | + |
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Preference number: 1 (lower is better) Translates to: TFKLTRRTEAVKEGF*RSGVVLNTLKPSNQ Trigger: CTGATTGCTGGGCTTTAAGGTATTCAACACCACACCTGACCTCCAAAAGCCTTCTTTCACTGCCTCTGTTCTCCGTGTTAGTTTGAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| 3UTR GCA 90 bp | ATTCTGTATCAAATTAAGACAGGAAATGCTGTTACCCAGAGTAACTaGTCAGACCCCTATACAGAATTCAATCATCTCACTATCTACACA | + |
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Preference number: 1 (lower is better) Translates to: ILYQIKTGNAVTQSN*SDPYTEFNHLTIYT Trigger: TGTGTAGATAGTGAGATGATTGAATTCTGTATAGGGGTCTGAGCAGTTACTCTGGGTAACAGCATTTCCTGTCTTAATTTGATACAGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAGGGCTGGGGTGGAGTTAGTGGTAGAGCTCACGACACAGGAGCAAGGCCCTGTGGCTAAAATATGTTaGAGATGTAACACACATTTC | + |
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Preference number: 2 (lower is better) Translates to: LRAGVELVVELTTQEQGPVAKIC*RCNTHF Trigger: GAAATGTGTGTTACATCTCCAACATATTTTAGCCAC...AGGGCCTTGCTCCTGTGTCGTGAGCTCTACCACTAACTCCACCCCAGCCCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| 3UTR-3UTR TCA 90 bp | AGATCTGGGATTAAAGGTGTGCACCACCATGTCCAGCATTTTCTACTAATTTCTGGAGAACAGAGGCAGTaGAAGAAGGCTTTTGGAGGT | + |
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Preference number: 2 (lower is better) Translates to: RSGIKGVHHHVQHFLLISGEQRQ*KKAFGG Trigger: ACCTCCAAAAGCCTTCTTTCACTGCCTCTGTTCTCC...AGAAATTAGTAGAAAATGCTGGACATGGTGGTGCACACCTTTAATCCCAGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGGGATTAAAGGTGTGCACCACCATGTCCAGCATTTTCTACTAATTTCTGATTTGAAGTCTCTTTACTaGCCTTCCATTAAGAACCAC | + |
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Preference number: 2 (lower is better) Translates to: SGIKGVHHHVQHFLLISDLKSLY*PSIKNH Trigger: GTGGTTCTTAATGGAAGGGCAGTAAAGAGACTTCAA...ATCAGAAATTAGTAGAAAATGCTGGACATGGTGGTGCACACCTTTAATCCCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| 3UTR-3UTR CAA 90 bp | TGTTGGAGATGTAACACACATTTCCTACAGGTTCTCACATTCAAACTAACACGGATAGACCCAGGGCTGTaGTGCCAGCTAGGCACGCAG | + |
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Preference number: 3 (lower is better) Translates to: CWRCNTHFLQVLTFKLTRIDPGL*CQLGTQ Trigger: CTGCGTGCCTAGCTGGCACAACAGCCCTGGGTCTAT...CCGTGTTAGTTTGAATGTGAGAACCTGTAGGAAATGTGTGTTACATCTCCAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| 3UTR GCA 72 bp | CAAATTAAGACAGGAAATGCTGTTACCCAGAGTAACTaGTCAGACCCCTATACAGAATTCAATCATCTCACT | + |
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Preference number: 3 (lower is better) Translates to: QIKTGNAVTQSN*SDPYTEFNHLT Trigger: AGTGAGATGATTGAATTCTGTATAGGGGTCTGAGCAGTTACTCTGGGTAACAGCATTTCCTGTCTTAATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR CCA 90 bp | CCCAGGGCTGTTGTGCCAGCTAGGCACGCAGATGCTCAGCCAGCCCTAGCTCTGTCGGCGCTCGGGTGCTaGAGCTTCTCCAGAAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PRAVVPARHADAQPALALSALGC*SFSRSS Trigger: GGAGCTTCTGGAGAAGCTCCAGCACCCGAGCGCCGA...CAGAGCTAGGGCTGGCTGAGCATCTGCGTGCCTAGCTGGCACAACAGCCCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034079.14 |
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| CDS-3UTR GCA 90 bp | GTAGACCTCTGTGAGCTCCAGGCCAGGAGGGGCTACCTAGAGAGAACCTGTCTCGGTAGTGCGGGCCGCTaGTGCACTAGCCGGGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: VDLCELQARRGYLERTCLGSAGR*CTSRAS Trigger: ACTGGCCCGGCTAGTGCAGCAGCGGCCCGCACTACC...GAGACAGGTTCTCTCTAGGTAGCCCCTCCTGGCCTGGAGCTCACAGAGGTCTAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034079.14 |
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| 3UTR CAA 72 bp | CTTTTTCCTCAGGAACTAGGGATAGACCCAGGGCTGTaGTGCCAGCTAGGCACGCAGATGCTCAGCCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: LFPQELGIDPGL*CQLGTQMLSQP Trigger: GGGCTGGCTGAGCATCTGCGTGCCTAGCTGGCACAACAGCCCTGGGTCTATCCCTAGTTCCTGAGGAAAAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR GCA 90 bp | GTAGACCTCTGTGAGCTCCAGGCCAGGAGGGGCTACCTAGAGAGAACCTGTCTCTATGAATGCCTTCTCTaGACAGCGTCATCAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: VDLCELQARRGYLERTCLYECLL*TASSAA Trigger: AGCAGCTGATGACGCTGTGCAGAGAAGGCATTCATA...GAGACAGGTTCTCTCTAGGTAGCCCCTCCTGGCCTGGAGCTCACAGAGGTCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR TCA 90 bp | AAGCAGCTTCTCTTACTCCTTTTTCCTCAGGAACTAGGGATAGACCCAGGGCTGTCCAGAGCAGTCTGCTaGGCTGTCAGCAACGCCATG | + |
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Preference number: 4 (lower is better) Translates to: KQLLLLLFPQELGIDPGLSRAVC*AVSNAM Trigger: CATGGCGTTGCTGACAGCTCAGCAGACTGCTCTGGA...CAGCCCTGGGTCTATCCCTAGTTCCTGAGGAAAAAGGAGTAAGAGAAGCTGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR GCA 90 bp | ATTCTGTATCAAATTAAGACAGGAAATGCTGTTACCCAGAGTAACTGCTCAGACAGTGCGGGCCGCTGCTaGACTAGCCGGGCCAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: ILYQIKTGNAVTQSNCSDSAGRC*TSRASP Trigger: GGGACTGGCCCGGCTAGTGCAGCAGCGGCCCGCACT...GTCTGAGCAGTTACTCTGGGTAACAGCATTTCCTGTCTTAATTTGATACAGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034079.14 |
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| CDS-3UTR TCA 90 bp | GGGAAACCCTTCAGTATTCTCAGCACTAAATCCATCAGGAGAAGCAGCTTCTCTTCCAGAGCAGTCTGCTaGGCTGTCAGCAACGCCATG | + |
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Preference number: 4 (lower is better) Translates to: GKPFSILSTKSIRRSSFSSRAVC*AVSNAM Trigger: CATGGCGTTGCTGACAGCTCAGCAGACTGCTCTGGA...AGAGAAGCTGCTTCTCCTGATGGATTTAGTGCTGAGAATACTGAAGGGTTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR TCA 90 bp | CAAGGGAAACCCTTCAGTATTCTCAGCACTAAATCCATCAGGAGAAGCAGCTTCAGAACTGAGGTCGCTTaGAGCGCTTCGTCCGACTCT | + |
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Preference number: 4 (lower is better) Translates to: QGKPFSILSTKSIRRSSFRTEVA*SASSDS Trigger: AGAGTCGGACGAAGCGCTTCAAGCGACCTCAGTTCT...GAAGCTGCTTCTCCTGATGGATTTAGTGCTGAGAATACTGAAGGGTTTCCCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034079.14 |
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| CDS-3UTR TCA 90 bp | TCAGGTGTGGTGTTGAATACCTTAAAGCCCAGCAATCAGAAAACTGAGGCAGGTTCGATAGGGGAGAACTaGGGTCGCTTGAAGCGCTTC | + |
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Preference number: 4 (lower is better) Translates to: SGVVLNTLKPSNQKTEAGSIGEN*GRLKRF Trigger: GAAGCGCTTCAAGCGACCTCAGTTCTCCCCTATCGA...ACCTGCCTCAGTTTTCTGATTGCTGGGCTTTAAGGTATTCAACACCACACCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034079.14 |
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| CDS-3UTR TCA 90 bp | GAGGCAGTGAAAGAAGGCTTTTGGAGGTCAGGTGTGGTGTTGAATACCTTAAAGAACCTCCACAAGCACTaGGGTTTCTCAGAGCTCCGG | + |
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Preference number: 4 (lower is better) Translates to: EAVKEGFWRSGVVLNTLKNLHKH*GFSELR Trigger: CCGGAGCTCTGAGAAACCTCAGTGCTTGTGGAGGTT...CTTTAAGGTATTCAACACCACACCTGACCTCCAAAAGCCTTCTTTCACTGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034079.14 |
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| CDS-3UTR GCA 90 bp | AGTATTCTCAGCACTAAATCCATCAGGAGAAGCAGCTTCTCTTACTCCTTTTTCACCTCGGCGCTCGGGTaGTGGAGCTTCTCCAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: SILSTKSIRRSSFSYSFFTSALG*WSFSRS Trigger: GCTTCTGGAGAAGCTCCAGCACCCGAGCGCCGAGGT...GAAAAAGGAGTAAGAGAAGCTGCTTCTCCTGATGGATTTAGTGCTGAGAATACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034079.14 |
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| CDS-3UTR GCA 90 bp | TGTTTGAAGTCTCTTTACTGCCCTTCCATTAAGAACCACCTGAGGGCTGGGGTGTTGGAGGCCATTGTTTaGAAAAGGGCCCTCAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: CLKSLYCPSIKNHLRAGVLEAIV*KRALKA Trigger: TGCTTTGAGGGCCCTTTTGCAAACAATGGCCTCCAA...CACCCCAGCCCTCAGGTGGTTCTTAATGGAAGGGCAGTAAAGAGACTTCAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR GCA 90 bp | GCTCCATCTGTAGTCCAGGTTGGCCTTGAACTCAAGAGATCCTCCTGCCTCTGCGGCATTAATGATTTCTaGCTGACTCTTAGATGGAAT | + |
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Preference number: 4 (lower is better) Translates to: APSVVQVGLELKRSSCLCGINDF*LTLRWN Trigger: ATTCCATCTAAGAGTCAGGCAGAAATCATTAATGCC...GCAGAGGCAGGAGGATCTCTTGAGTTCAAGGCCAACCTGGACTACAGATGGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR GCA 90 bp | ATTCAAGGGAAACCCTTCAGTATTCTCAGCACTAAATCCATCAGGAGAAGCAGCAATGGGGACATCAGGTaGCCACTGCACTCACTGAAG | + |
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Preference number: 4 (lower is better) Translates to: IQGKPFSILSTKSIRRSSNGDIR*PLHSLK Trigger: CTTCAGTGAGTGCAGTGGGCACCTGATGTCCCCATT...GCTGCTTCTCCTGATGGATTTAGTGCTGAGAATACTGAAGGGTTTCCCTTGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR CCA 90 bp | GGAAACCCTTCAGTATTCTCAGCACTAAATCCATCAGGAGAAGCAGCTTCTCTTCCTTTAGGTTCCAGATaGTGCCTGCCACCAGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: GNPSVFSALNPSGEAASLPLGSR*CLPPVS Trigger: AGACACTGGTGGCAGGCACCATCTGGAACCTAAAGG...AAGAGAAGCTGCTTCTCCTGATGGATTTAGTGCTGAGAATACTGAAGGGTTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR CCA 90 bp | TCAGCACTAAATCCATCAGGAGAAGCAGCTTCTCTTACTCCTTTTTCCTCAGGACCTTTAGGTTCCAGATaGTGCCTGCCACCAGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: SALNPSGEAASLTPFSSGPLGSR*CLPPVS Trigger: AGACACTGGTGGCAGGCACCATCTGGAACCTAAAGG...TCCTGAGGAAAAAGGAGTAAGAGAAGCTGCTTCTCCTGATGGATTTAGTGCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR CCA 90 bp | ACAGAGGCAGTGAAAGAAGGCTTTTGGAGGTCAGGTGTGGTGTTGAATACCTTAGCAGTCTTTAGCCGCTaGGTTTCAGCTTCCTTCATC | + |
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Preference number: 4 (lower is better) Translates to: TEAVKEGFWRSGVVLNTLAVFSR*VSASFI Trigger: GATGAAGGAAGCTGAAACCCAGCGGCTAAAGACTGC...TAAGGTATTCAACACCACACCTGACCTCCAAAAGCCTTCTTTCACTGCCTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR GCA 90 bp | CAGGAGAAGCAGCTTCTCTTACTCCTTTTTCCTCAGGAACTAGGGATAGACCCATCACTCGAACCCCAATaGTACTGCTATGAATGCCTT | + |
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Preference number: 4 (lower is better) Translates to: QEKQLLLLLFPQELGIDPSLEPQ*YCYECL Trigger: AAGGCATTCATAGCAGTAGCATTGGGGTTCGAGTGA...TGGGTCTATCCCTAGTTCCTGAGGAAAAAGGAGTAAGAGAAGCTGCTTCTCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR CCA 90 bp | CAAGGGAAACCCTTCAGTATTCTCAGCACTAAATCCATCAGGAGAAGCAGCTTCAGGGGTCATACACTGTaGAATGTTCTTGGAGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: QGKPFSILSTKSIRRSSFRGHTL*NVLGGH Trigger: ATGGCCTCCAAGAACATTCCACAGTGTATGACCCCT...GAAGCTGCTTCTCCTGATGGATTTAGTGCTGAGAATACTGAAGGGTTTCCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR TCA 90 bp | CAGGAGAAGCAGCTTCTCTTACTCCTTTTTCCTCAGGAACTAGGGATAGACCCACTTCCTTCATCTGAATaGCCATGTTGCCAGTATTCA | + |
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Preference number: 4 (lower is better) Translates to: QEKQLLLLLFPQELGIDPLPSSE*PCCQYS Trigger: TGAATACTGGCAACATGGTCATTCAGATGAAGGAAG...TGGGTCTATCCCTAGTTCCTGAGGAAAAAGGAGTAAGAGAAGCTGCTTCTCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR GCA 90 bp | AATCCATCAGGAGAAGCAGCTTCTCTTACTCCTTTTTCCTCAGGAACTAGGGATTTGGAGGCCATTGTTTaGAAAAGGGCCCTCAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: NPSGEAASLTPFSSGTRDLEAIV*KRALKA Trigger: TGCTTTGAGGGCCCTTTTGCAAACAATGGCCTCCAA...ATCCCTAGTTCCTGAGGAAAAAGGAGTAAGAGAAGCTGCTTCTCCTGATGGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR GCA 90 bp | ACAGAGGCAGTGAAAGAAGGCTTTTGGAGGTCAGGTGTGGTGTTGAATACCTTATCACTCGAACCCCAATaGTACTGCTATGAATGCCTT | + |
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Preference number: 4 (lower is better) Translates to: TEAVKEGFWRSGVVLNTLSLEPQ*YCYECL Trigger: AAGGCATTCATAGCAGTAGCATTGGGGTTCGAGTGA...TAAGGTATTCAACACCACACCTGACCTCCAAAAGCCTTCTTTCACTGCCTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR CCA 90 bp | TCAGGTGTGGTGTTGAATACCTTAAAGCCCAGCAATCAGAAAACTGAGGCAGGTAGATTTCAGGAGCTCTaGGTTATCTTCCGTCACTGT | + |
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Preference number: 4 (lower is better) Translates to: SGVVLNTLKPSNQKTEAGRFQEL*VIFRHC Trigger: ACAGTGACGGAAGATAACCCAGAGCTCCTGAAATCT...ACCTGCCTCAGTTTTCTGATTGCTGGGCTTTAAGGTATTCAACACCACACCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR CCA 90 bp | TTTTGGAGGTCAGGTGTGGTGTTGAATACCTTAAAGCCCAGCAATCAGAAAACTGCAGTCTTTAGCCGCTaGGTTTCAGCTTCCTTCATC | + |
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Preference number: 4 (lower is better) Translates to: FWRSGVVLNTLKPSNQKTAVFSR*VSASFI Trigger: GATGAAGGAAGCTGAAACCCAGCGGCTAAAGACTGC...AGTTTTCTGATTGCTGGGCTTTAAGGTATTCAACACCACACCTGACCTCCAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR CCA 90 bp | AAGCAGCTTCTCTTACTCCTTTTTCCTCAGGAACTAGGGATAGACCCAGGGCTGACTGTGGAATGTTCTTaGAGGCCATTGTTTGCAAAA | + |
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Preference number: 4 (lower is better) Translates to: KQLLLLLFPQELGIDPGLTVECS*RPLFAK Trigger: TTTTGCAAACAATGGCCTCCAAGAACATTCCACAGT...CAGCCCTGGGTCTATCCCTAGTTCCTGAGGAAAAAGGAGTAAGAGAAGCTGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| 3UTR CAA 72 bp | GCAGTGAAAGAAGGCTTTTGGAGGTCAGGTGTGGTGTaGAATACCTTAAAGCCCAGCAATCAGAAAACTGAG | + |
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Preference number: 4 (lower is better) Translates to: AVKEGFWRSGVV*NTLKPSNQKTE Trigger: CTCAGTTTTCTGATTGCTGGGCTTTAAGGTATTCAACACCACACCTGACCTCCAAAAGCCTTCTTTCACTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR TCA 90 bp | TCAGCACTAAATCCATCAGGAGAAGCAGCTTCTCTTACTCCTTTTTCCTCAGGATCAGCTTCCTTCATCTaGATGACCATGTTGCCAGTA | + |
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Preference number: 4 (lower is better) Translates to: SALNPSGEAASLTPFSSGSASFI*MTMLPV Trigger: TACTGGCAACATGGTCATTCAGATGAAGGAAGCTGA...TCCTGAGGAAAAAGGAGTAAGAGAAGCTGCTTCTCCTGATGGATTTAGTGCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR TCA 90 bp | AATCCATCAGGAGAAGCAGCTTCTCTTACTCCTTTTTCCTCAGGAACTAGGGATTCAGCTTCCTTCATCTaGATGACCATGTTGCCAGTA | + |
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Preference number: 4 (lower is better) Translates to: NPSGEAASLTPFSSGTRDSASFI*MTMLPV Trigger: TACTGGCAACATGGTCATTCAGATGAAGGAAGCTGA...ATCCCTAGTTCCTGAGGAAAAAGGAGTAAGAGAAGCTGCTTCTCCTGATGGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR TCA 90 bp | TGTTTGAAGTCTCTTTACTGCCCTTCCATTAAGAACCACCTGAGGGCTGGGGTGTGCAACACTGTTTGGTaGAGATGTTTTCTCAAAAAC | + |
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Preference number: 4 (lower is better) Translates to: CLKSLYCPSIKNHLRAGVCNTVW*RCFLKN Trigger: GTTTTTGAGAAAACATCTTCACCAAACAGTGTTGCA...CACCCCAGCCCTCAGGTGGTTCTTAATGGAAGGGCAGTAAAGAGACTTCAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR CCA 90 bp | AATCCATCAGGAGAAGCAGCTTCTCTTACTCCTTTTTCCTCAGGAACTAGGGATAGATTTCAGGAGCTCTaGGTTATCTTCCGTCACTGT | + |
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Preference number: 4 (lower is better) Translates to: NPSGEAASLTPFSSGTRDRFQEL*VIFRHC Trigger: ACAGTGACGGAAGATAACCCAGAGCTCCTGAAATCT...ATCCCTAGTTCCTGAGGAAAAAGGAGTAAGAGAAGCTGCTTCTCCTGATGGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR TCA 90 bp | AGAACAGAGGCAGTGAAAGAAGGCTTTTGGAGGTCAGGTGTGGTGTTGAATACCTCCGTATCTTCATTTTaGAGACTGGTTGGAATTCTT | + |
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Preference number: 4 (lower is better) Translates to: RTEAVKEGFWRSGVVLNTSVSSF*RLVGIL Trigger: AAGAATTCCAACCAGTCTTCAAAATGAAGATACGGA...GGTATTCAACACCACACCTGACCTCCAAAAGCCTTCTTTCACTGCCTCTGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR GCA 90 bp | AATCCATCAGGAGAAGCAGCTTCTCTTACTCCTTTTTCCTCAGGAACTAGGGATGTTGAATATAGACACTaGTCTGCCACTGCATTCACA | + |
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Preference number: 4 (lower is better) Translates to: NPSGEAASLTPFSSGTRDVEYRH*SATAFT Trigger: TGTGAATGCAGTGGCAGAGCAGTGTCTATATTCAAC...ATCCCTAGTTCCTGAGGAAAAAGGAGTAAGAGAAGCTGCTTCTCCTGATGGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR GCA 90 bp | TTTCTGATTCTGTATCAAATTAAGACAGGAAATGCTGTTACCCAGAGTAACTGCAATGGGGACATCAGGTaGCCACTGCACTCACTGAAG | + |
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Preference number: 4 (lower is better) Translates to: FLILYQIKTGNAVTQSNCNGDIR*PLHSLK Trigger: CTTCAGTGAGTGCAGTGGGCACCTGATGTCCCCATT...GCAGTTACTCTGGGTAACAGCATTTCCTGTCTTAATTTGATACAGAATCAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR GCA 90 bp | TGTTGGAGATGTAACACACATTTCCTACAGGTTCTCACATTCAAACTAACACGGTATGAATGCCTTCTCTaGACAGCGTCATCAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: CWRCNTHFLQVLTFKLTRYECLL*TASSAA Trigger: AGCAGCTGATGACGCTGTGCAGAGAAGGCATTCATA...CCGTGTTAGTTTGAATGTGAGAACCTGTAGGAAATGTGTGTTACATCTCCAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR CCA 90 bp | CTGCTCAGACCCCTATACAGAATTCAATCATCTCACTATCTACACAGTGACAAAAGGGGTCATACACTGTaGAATGTTCTTGGAGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: LLRPLYRIQSSHYLHSDKRGHTL*NVLGGH Trigger: ATGGCCTCCAAGAACATTCCACAGTGTATGACCCCT...TTTGTCACTGTGTAGATAGTGAGATGATTGAATTCTGTATAGGGGTCTGAGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR TCA 90 bp | TTTTGGAGGTCAGGTGTGGTGTTGAATACCTTAAAGCCCAGCAATCAGAAAACTCTTCCTTCATCTGAATaGCCATGTTGCCAGTATTCA | + |
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Preference number: 4 (lower is better) Translates to: FWRSGVVLNTLKPSNQKTLPSSE*PCCQYS Trigger: TGAATACTGGCAACATGGTCATTCAGATGAAGGAAG...AGTTTTCTGATTGCTGGGCTTTAAGGTATTCAACACCACACCTGACCTCCAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR TCA 90 bp | GAGGCAGTGAAAGAAGGCTTTTGGAGGTCAGGTGTGGTGTTGAATACCTTAAAGCAATTTAATTTGAACTaGAGCCTTTTCAGCTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: EAVKEGFWRSGVVLNTLKQFNLN*SLFSCF Trigger: GAAGCAGCTGAAAAGGCTTCAGTTCAAATTAAATTG...CTTTAAGGTATTCAACACCACACCTGACCTCCAAAAGCCTTCTTTCACTGCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
||
| CDS-3UTR TCA 90 bp | GAGGCAGTGAAAGAAGGCTTTTGGAGGTCAGGTGTGGTGTTGAATACCTTAAAGTCCGTATCTTCATTTTaGAGACTGGTTGGAATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EAVKEGFWRSGVVLNTLKSVSSF*RLVGIL Trigger: AAGAATTCCAACCAGTCTTCAAAATGAAGATACGGA...CTTTAAGGTATTCAACACCACACCTGACCTCCAAAAGCCTTCTTTCACTGCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
||
| CDS-3UTR GCA 90 bp | AGTATTCTCAGCACTAAATCCATCAGGAGAAGCAGCTTCTCTTACTCCTTTTTCCAGCCTCATTGGCTATaGTCTCTACAGGATTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SILSTKSIRRSSFSYSFFQPHWL*SLQDFS Trigger: AGAGAAATCCTGTAGAGAGCATAGCCAATGAGGCTG...GAAAAAGGAGTAAGAGAAGCTGCTTCTCCTGATGGATTTAGTGCTGAGAATACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
||
| CDS-3UTR GCA 90 bp | GGGAAACCCTTCAGTATTCTCAGCACTAAATCCATCAGGAGAAGCAGCTTCTCTGGCATTAATGATTTCTaGCTGACTCTTAGATGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GKPFSILSTKSIRRSSFSGINDF*LTLRWN Trigger: ATTCCATCTAAGAGTCAGGCAGAAATCATTAATGCC...AGAGAAGCTGCTTCTCCTGATGGATTTAGTGCTGAGAATACTGAAGGGTTTCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR CCA 90 bp | TCAGGTGTGGTGTTGAATACCTTAAAGCCCAGCAATCAGAAAACTGAGGCAGGTATTTTGAAGACTGGTTaGAATTCTTTCAAAGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SGVVLNTLKPSNQKTEAGILKTG*NSFKAA Trigger: AGCGGCTTTGAAAGAATTCCAACCAGTCTTCAAAAT...ACCTGCCTCAGTTTTCTGATTGCTGGGCTTTAAGGTATTCAACACCACACCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR CCA 90 bp | GAGGCAGTGAAAGAAGGCTTTTGGAGGTCAGGTGTGGTGTTGAATACCTTAAAGATTTTGAAGACTGGTTaGAATTCTTTCAAAGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: EAVKEGFWRSGVVLNTLKILKTG*NSFKAA Trigger: AGCGGCTTTGAAAGAATTCCAACCAGTCTTCAAAAT...CTTTAAGGTATTCAACACCACACCTGACCTCCAAAAGCCTTCTTTCACTGCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR TCA 90 bp | TCAGCACTAAATCCATCAGGAGAAGCAGCTTCTCTTACTCCTTTTTCCTCAGGATGCAACACTGTTTGGTaGAGATGTTTTCTCAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SALNPSGEAASLTPFSSGCNTVW*RCFLKN Trigger: GTTTTTGAGAAAACATCTTCACCAAACAGTGTTGCA...TCCTGAGGAAAAAGGAGTAAGAGAAGCTGCTTCTCCTGATGGATTTAGTGCTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
||
| CDS-3UTR GCA 90 bp | ATTCTGTATCAAATTAAGACAGGAAATGCTGTTACCCAGAGTAACTGCTCAGACCGTCATGATGTCCTTTaGCACCATGTCATCACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ILYQIKTGNAVTQSNCSDRHDVL*HHVITN Trigger: GTTTGTGATGACATGGTGGCAAAGGACATCATGACG...GTCTGAGCAGTTACTCTGGGTAACAGCATTTCCTGTCTTAATTTGATACAGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034079.14 |
||
| CDS-3UTR TCA 90 bp | TTTTGGAGGTCAGGTGTGGTGTTGAATACCTTAAAGCCCAGCAATCAGAAAACTATAAGGGCTCTACACTaGATAGTGTTCATTTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: FWRSGVVLNTLKPSNQKTIRALH*IVFIFL Trigger: TAGGAAAATGAACACTATTCAGTGTAGAGCCCTTAT...AGTTTTCTGATTGCTGGGCTTTAAGGTATTCAACACCACACCTGACCTCCAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
||
| CDS-3UTR GCA 90 bp | CTGATTCTGTATCAAATTAAGACAGGAAATGCTGTTACCCAGAGTAACTGCTCAGTTGAATATAGACACTaGTCTGCCACTGCATTCACA | + |
|
Preference number: 4 (lower is better) Translates to: LILYQIKTGNAVTQSNCSVEYRH*SATAFT Trigger: TGTGAATGCAGTGGCAGAGCAGTGTCTATATTCAAC...TGAGCAGTTACTCTGGGTAACAGCATTTCCTGTCTTAATTTGATACAGAATCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR CCA 90 bp | AGATCTGGGATTAAAGGTGTGCACCACCATGTCCAGCATTTTCTACTAATTTCTACTGTGGAATGTTCTTaGAGGCCATTGTTTGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RSGIKGVHHHVQHFLLISTVECS*RPLFAK Trigger: TTTTGCAAACAATGGCCTCCAAGAACATTCCACAGT...AGAAATTAGTAGAAAATGCTGGACATGGTGGTGCACACCTTTAATCCCAGATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR TCA 90 bp | AGTATTCTCAGCACTAAATCCATCAGGAGAAGCAGCTTCTCTTACTCCTTTTTCCAATTTAATTTGAACTaGAGCCTTTTCAGCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SILSTKSIRRSSFSYSFFQFNLN*SLFSCF Trigger: GAAGCAGCTGAAAAGGCTTCAGTTCAAATTAAATTG...GAAAAAGGAGTAAGAGAAGCTGCTTCTCCTGATGGATTTAGTGCTGAGAATACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR TCA 90 bp | CTGATTCTGTATCAAATTAAGACAGGAAATGCTGTTACCCAGAGTAACTGCTCAATAAGGGCTCTACACTaGATAGTGTTCATTTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LILYQIKTGNAVTQSNCSIRALH*IVFIFL Trigger: TAGGAAAATGAACACTATTCAGTGTAGAGCCCTTAT...TGAGCAGTTACTCTGGGTAACAGCATTTCCTGTCTTAATTTGATACAGAATCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS GCA 90 bp | CGGGCCAGTCCCGCGCAGGCGCACTCGCGGACCTCGGCGCTCGGGTaGTGGAGCTTCTCCAGAAGCTCCGCCGCGGGCCCATCGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RASPAQAHSRTSALG*WSFSRSSAAGPSSS Trigger: GGAGGACGATGGGCCCGCGGCGGAGCTTCTGGAGAAGCTCCAGCACCCGAGCGCCGAGGTCCGCGAGTGCGCCTGCGCGGGACTGGCCCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034079.14 |
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| CDS CCA 90 bp | GCCAGTCCCGCGCAGGCGCACTCGCGGACCTCGGCGCTCGGGTGCTaGAGCTTCTCCAGAAGCTCCGCCGCGGGCCCATCGTCCTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: ASPAQAHSRTSALGC*SFSRSSAAGPSSSS Trigger: CGAGGAGGACGATGGGCCCGCGGCGGAGCTTCTGGAGAAGCTCCAGCACCCGAGCGCCGAGGTCCGCGAGTGCGCCTGCGCGGGACTGGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034079.14 |
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| CDS GCA 90 bp | CGGCGCACAGCATCCCGACGGGCTAAGTCTGGTAGTGCGGGCCGCTaGTGCACTAGCCGGGCCAGTCCCGCGCAGGCGCACTCGCGGACC | + |
|
Preference number: 5 (lower is better) Translates to: RRTASRRAKSGSAGR*CTSRASPAQAHSRT Trigger: GGTCCGCGAGTGCGCCTGCGCGGGACTGGCCCGGCTAGTGCAGCAGCGGCCCGCACTACCAGACTTAGCCCGTCGGGATGCTGTGCGCCG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034079.14 |
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| CDS GCA 90 bp | CGCACAGCATCCCGACGGGCTAAGTCTGGTAGTGCGGGCCGCTGCTaGACTAGCCGGGCCAGTCCCGCGCAGGCGCACTCGCGGACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RTASRRAKSGSAGRC*TSRASPAQAHSRTS Trigger: CGAGGTCCGCGAGTGCGCCTGCGCGGGACTGGCCCGGCTAGTGCAGCAGCGGCCCGCACTACCAGACTTAGCCCGTCGGGATGCTGTGCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034079.14 |
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| CDS TCA 90 bp | CCTTTGCCACCATGTCATCACAAACGTCAAAACCTCCACAAGCACTaGGGTTTCTCAGAGCTCCGGCCGCCGTCTCCCTTACCGCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: PLPPCHHKRQNLHKH*GFSELRPPSPLPPD Trigger: GTCTGGCGGTAAGGGAGACGGCGGCCGGAGCTCTGAGAAACCTCAGTGCTTGTGGAGGTTTTGACGTTTGTGATGACATGGTGGCAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034079.14 |
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| CDS-3UTR CAA 90 bp | CCCAGGGCTGTTGTGCCAGCTAGGCACGCAGATGCTCAGCCAGCCCTAGCTCTGCACTGTGGAATGTTCTaGGAGGCCATTGTTTGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PRAVVPARHADAQPALALHCGMF*EAIVCK Trigger: TTTGCAAACAATGGCCTCCAAGAACATTCCACAGTG...CAGAGCTAGGGCTGGCTGAGCATCTGCGTGCCTAGCTGGCACAACAGCCCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS CCA 90 bp | CAAGGGAAGGGTCTTTGGTGGCGACTTCCAGCAGAAAGCACCCAATaGTCTTCAGAGTGTCAAGTGTGCCGTCGTCTTTGGCTAGGACGC | + |
|
Preference number: 5 (lower is better) Translates to: QGKGLWWRLPAESTQ*SSECQVCRRLWLGR Trigger: GCGTCCTAGCCAAAGACGACGGCACACTTGACACTCTGAAGACCATTGGGTGCTTTCTGCTGGAAGTCGCCACCAAAGACCCTTCCCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS CCA 90 bp | GGGCATCCAGAGCCTCGCCTGTTACCACAAGGGAAGGGTCTTTGGTaGCGACTTCCAGCAGAAAGCACCCAATGGTCTTCAGAGTGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: GHPEPRLLPQGKGLW*RLPAESTQWSSECQ Trigger: TTGACACTCTGAAGACCATTGGGTGCTTTCTGCTGGAAGTCGCCACCAAAGACCCTTCCCTTGTGGTAACAGGCGAGGCTCTGGATGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS CCA 90 bp | AGAGGGCATCCAGAGCCTCGCCTGTTACCACAAGGGAAGGGTCTTTaGTGGCGACTTCCAGCAGAAAGCACCCAATGGTCTTCAGAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: RGHPEPRLLPQGKGL*WRLPAESTQWSSEC Trigger: ACACTCTGAAGACCATTGGGTGCTTTCTGCTGGAAGTCGCCACCAAAGACCCTTCCCTTGTGGTAACAGGCGAGGCTCTGGATGCCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR CAA 90 bp | CTGAGGGCTGGGGTGGAGTTAGTGGTAGAGCTCACGACACAGGAGCAAGGCCCTACATTCACAGCCTCATaGGCTATGCTCTCTACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LRAGVELVVELTTQEQGPTFTAS*AMLSTG Trigger: TCCTGTAGAGAGCATAGCCAATGAGGCTGTGAATGT...AGGGCCTTGCTCCTGTGTCGTGAGCTCTACCACTAACTCCACCCCAGCCCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS CCA 90 bp | GAGGCAGTTGGTAAGGGCAGAGTGAATCTCGTGGGACAGGCACAATaGGGACATCAGGTGCCCACTGCACTCACTGAAGGAGTTTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: EAVGKGRVNLVGQAQ*GHQVPTALTEGVFH Trigger: ATGGAAAACTCCTTCAGTGAGTGCAGTGGGCACCTGATGTCCCCATTGTGCCTGTCCCACGAGATTCACTCTGCCCTTACCAACTGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS TCA 90 bp | CCAGTCCAGAGAGACACTCTCTCAGTAGTGCCACCAGGGGCGTCATaGTGTCCTTTGCCACCATGTCATCACAAACGTCAAAACCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PVQRDTLSVVPPGAS*CPLPPCHHKRQNLH Trigger: GTGGAGGTTTTGACGTTTGTGATGACATGGTGGCAAAGGACATCATGACGCCCCTGGTGGCACTACTGAGAGAGTGTCTCTCTGGACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034079.14 |
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| CDS-3UTR CAA 90 bp | GTAGACCTCTGTGAGCTCCAGGCCAGGAGGGGCTACCTAGAGAGAACCTGTCTCTCACTGCAGCACATGTaGACAATAACTTCCAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VDLCELQARRGYLERTCLSLQHM*TITSRA Trigger: TGCTCTGGAAGTTATTGTCAACATGTGCTGCAGTGA...GAGACAGGTTCTCTCTAGGTAGCCCCTCCTGGCCTGGAGCTCACAGAGGTCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS TCA 90 bp | TCTTCACTGCAGCACATGTTGACAATAACTTCCAGAGCAGTCTGCTaGGCTGTCAGCAACGCCATGGCCTCTCGCAGCTCCTTGTCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SSLQHMLTITSRAVC*AVSNAMASRSSLSV Trigger: TACTGACAAGGAGCTGCGAGAGGCCATGGCGTTGCTGACAGCTCAGCAGACTGCTCTGGAAGTTATTGTCAACATGTGCTGCAGTGAAGA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR CAA 90 bp | GTAGACCTCTGTGAGCTCCAGGCCAGGAGGGGCTACCTAGAGAGAACCTGTCTCCATTTTGAAGACTGGTaGGAATTCTTTCAAAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: VDLCELQARRGYLERTCLHFEDW*EFFQSR Trigger: GCGGCTTTGAAAGAATTCCAACCAGTCTTCAAAATG...GAGACAGGTTCTCTCTAGGTAGCCCCTCCTGGCCTGGAGCTCACAGAGGTCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS GCA 90 bp | AGGCGACAGGACAAAGCAAAGCAGACTCCAGCACACGTAGTGCTGTaGCATCAAAAGATTTCAGGAGCTCTGGGTTATCTTCCGTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: RRQDKAKQTPAHVVL*HQKISGALGYLPSL Trigger: CAGTGACGGAAGATAACCCAGAGCTCCTGAAATCTTTTGATGGCACAGCACTACGTGTGCTGGAGTCTGCTTTGCTTTGTCCTGTCGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS GCA 90 bp | CCACATTCACTCGAACCCCAATGCTACTGCTATGAATGCCTTCTCTaGACAGCGTCATCAGCTGCTCAGGGGTCATACACTGTGGAATGT | + |
|
Preference number: 5 (lower is better) Translates to: PHSLEPQCYCYECLL*TASSAAQGSYTVEC Trigger: ACATTCCACAGTGTATGACCCCTGAGCAGCTGATGACGCTGTGCAGAGAAGGCATTCATAGCAGTAGCATTGGGGTTCGAGTGAATGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR CAA 90 bp | GAGGCAGTGAAAGAAGGCTTTTGGAGGTCAGGTGTGGTGTTGAATACCTTAAAGCTTGGAGGCCATTGTTaGCAAAAGGGCCCTCAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: EAVKEGFWRSGVVLNTLKLGGHC*QKGPQS Trigger: GCTTTGAGGGCCCTTTTGCAAACAATGGCCTCCAAG...CTTTAAGGTATTCAACACCACACCTGACCTCCAAAAGCCTTCTTTCACTGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR CAA 90 bp | TCAGCACTAAATCCATCAGGAGAAGCAGCTTCTCTTACTCCTTTTTCCTCAGGAACAAGGGAAGGGTCTTaGGTGGCGACTTCCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SALNPSGEAASLTPFSSGTREGS*VATSSR Trigger: TCTGCTGGAAGTCGCCACCAAAGACCCTTCCCTTGT...TCCTGAGGAAAAAGGAGTAAGAGAAGCTGCTTCTCCTGATGGATTTAGTGCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR CAA 90 bp | AATCCATCAGGAGAAGCAGCTTCTCTTACTCCTTTTTCCTCAGGAACTAGGGATACAAGGGAAGGGTCTTaGGTGGCGACTTCCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: NPSGEAASLTPFSSGTRDTREGS*VATSSR Trigger: TCTGCTGGAAGTCGCCACCAAAGACCCTTCCCTTGT...ATCCCTAGTTCCTGAGGAAAAAGGAGTAAGAGAAGCTGCTTCTCCTGATGGATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR CAA 90 bp | AAGCAGCTTCTCTTACTCCTTTTTCCTCAGGAACTAGGGATAGACCCAGGGCTGCACTGTGGAATGTTCTaGGAGGCCATTGTTTGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: KQLLLLLFPQELGIDPGLHCGMF*EAIVCK Trigger: TTTGCAAACAATGGCCTCCAAGAACATTCCACAGTG...CAGCCCTGGGTCTATCCCTAGTTCCTGAGGAAAAAGGAGTAAGAGAAGCTGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS CCA 90 bp | CTGTCTGTAAACAATACGCTACGGAGACAGCCAGGTCAATACTGGTaGGGAACCTACGTAAGTACTGTAACACAATCTCCAAACACCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LSVNNTLRRQPGQYW*GTYVSTVTQSPNTL Trigger: AAGGGTGTTTGGAGATTGTGTTACAGTACTTACGTAGGTTCCCCACCAGTATTGACCTGGCTGTCTCCGTAGCGTATTGTTTACAGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS CCA 90 bp | TCACTGTCTGTAAACAATACGCTACGGAGACAGCCAGGTCAATACTaGTGGGGAACCTACGTAAGTACTGTAACACAATCTCCAAACACC | + |
|
Preference number: 5 (lower is better) Translates to: SLSVNNTLRRQPGQY*WGTYVSTVTQSPNT Trigger: GGTGTTTGGAGATTGTGTTACAGTACTTACGTAGGTTCCCCACCAGTATTGACCTGGCTGTCTCCGTAGCGTATTGTTTACAGACAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
||
| CDS-3UTR CAA 90 bp | TCAGGTGTGGTGTTGAATACCTTAAAGCCCAGCAATCAGAAAACTGAGGCAGGTGTGGAGACATCTCATTaGAATCCAGTCCAGAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SGVVLNTLKPSNQKTEAGVETSH*NPVQRD Trigger: GTCTCTCTGGACTGGATTCAAATGAGATGTCTCCAC...ACCTGCCTCAGTTTTCTGATTGCTGGGCTTTAAGGTATTCAACACCACACCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR CAA 90 bp | GGGAAACCCTTCAGTATTCTCAGCACTAAATCCATCAGGAGAAGCAGCTTCTCTACATTCACAGCCTCATaGGCTATGCTCTCTACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GKPFSILSTKSIRRSSFSTFTAS*AMLSTG Trigger: TCCTGTAGAGAGCATAGCCAATGAGGCTGTGAATGT...AGAGAAGCTGCTTCTCCTGATGGATTTAGTGCTGAGAATACTGAAGGGTTTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
||
| CDS-3UTR CAA 90 bp | TTTTGGAGGTCAGGTGTGGTGTTGAATACCTTAAAGCCCAGCAATCAGAAAACTCTTGGAGGCCATTGTTaGCAAAAGGGCCCTCAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: FWRSGVVLNTLKPSNQKTLGGHC*QKGPQS Trigger: GCTTTGAGGGCCCTTTTGCAAACAATGGCCTCCAAG...AGTTTTCTGATTGCTGGGCTTTAAGGTATTCAACACCACACCTGACCTCCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
||
| CDS CCA 90 bp | CCGTCTCAAATTCATCTTCACATTGTCGAGAACACACAGCTGGTCTaGACTGTACTTGCCCCTCCCTTCTTTCCGTATCTTCATTTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: PSQIHLHIVENTQLV*TVLAPPFFPYLHFE Trigger: TTCAAAATGAAGATACGGAAAGAAGGGAGGGGCAAGTACAGTCCAGACCAGCTGTGTGTTCTCGACAATGTGAAGATGAATTTGAGACGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
||
| CDS CCA 90 bp | ATAAACCGTCTCAAATTCATCTTCACATTGTCGAGAACACACAGCTaGTCTGGACTGTACTTGCCCCTCCCTTCTTTCCGTATCTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: INRLKFIFTLSRTHS*SGLYLPLPSFRIFI Trigger: AATGAAGATACGGAAAGAAGGGAGGGGCAAGTACAGTCCAGACCAGCTGTGTGTTCTCGACAATGTGAAGATGAATTTGAGACGGTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
||
| CDS-3UTR CAA 90 bp | GGGAAACCCTTCAGTATTCTCAGCACTAAATCCATCAGGAGAAGCAGCTTCTCTCATTTTGAAGACTGGTaGGAATTCTTTCAAAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: GKPFSILSTKSIRRSSFSHFEDW*EFFQSR Trigger: GCGGCTTTGAAAGAATTCCAACCAGTCTTCAAAATG...AGAGAAGCTGCTTCTCCTGATGGATTTAGTGCTGAGAATACTGAAGGGTTTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
||
| CDS-3UTR CAA 90 bp | AAGCAGCTTCTCTTACTCCTTTTTCCTCAGGAACTAGGGATAGACCCAGGGCTGTTCCGTATCTTCATTTaGAAGACTGGTTGGAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: KQLLLLLFPQELGIDPGLFRIFI*KTGWNS Trigger: AGAATTCCAACCAGTCTTCAAAATGAAGATACGGAA...CAGCCCTGGGTCTATCCCTAGTTCCTGAGGAAAAAGGAGTAAGAGAAGCTGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
||
| CDS TCA 90 bp | AGAACTTCAGACAAGGCACCTAGGATGGCATTAATGATTTCTGCCTaGCTCTTAGATGGAATAATGTCCTTTAGGTTCCAGATGGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RTSDKAPRMALMISA*LLDGIMSFRFQMVP Trigger: AGGCACCATCTGGAACCTAAAGGACATTATTCCATCTAAGAGTCAGGCAGAAATCATTAATGCCATCCTAGGTGCCTTGTCTGAAGTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR CAA 90 bp | TGTTGGAGATGTAACACACATTTCCTACAGGTTCTCACATTCAAACTAACACGGGTGGAGACATCTCATTaGAATCCAGTCCAGAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: CWRCNTHFLQVLTFKLTRVETSH*NPVQRD Trigger: GTCTCTCTGGACTGGATTCAAATGAGATGTCTCCAC...CCGTGTTAGTTTGAATGTGAGAACCTGTAGGAAATGTGTGTTACATCTCCAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR CAA 90 bp | TCAGGTGTGGTGTTGAATACCTTAAAGCCCAGCAATCAGAAAACTGAGGCAGGTTCCAAACACCCTTCTTaGTTGAATATAGACACTGCT | + |
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Preference number: 5 (lower is better) Translates to: SGVVLNTLKPSNQKTEAGSKHPS*LNIDTA Trigger: AGCAGTGTCTATATTCAACAAAGAAGGGTGTTTGGA...ACCTGCCTCAGTTTTCTGATTGCTGGGCTTTAAGGTATTCAACACCACACCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR CAA 90 bp | TGTTGGAGATGTAACACACATTTCCTACAGGTTCTCACATTCAAACTAACACGGTCACTGCAGCACATGTaGACAATAACTTCCAGAGCA | + |
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Preference number: 5 (lower is better) Translates to: CWRCNTHFLQVLTFKLTRSLQHM*TITSRA Trigger: TGCTCTGGAAGTTATTGTCAACATGTGCTGCAGTGA...CCGTGTTAGTTTGAATGTGAGAACCTGTAGGAAATGTGTGTTACATCTCCAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR CAA 90 bp | AATCCATCAGGAGAAGCAGCTTCTCTTACTCCTTTTTCCTCAGGAACTAGGGATCAACTGCAACACTGTTaGGTGAAGATGTTTTCTCAA | + |
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Preference number: 5 (lower is better) Translates to: NPSGEAASLTPFSSGTRDQLQHC*VKMFSQ Trigger: TTGAGAAAACATCTTCACCAAACAGTGTTGCAGTTG...ATCCCTAGTTCCTGAGGAAAAAGGAGTAAGAGAAGCTGCTTCTCCTGATGGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR CAA 90 bp | GAGGCAGTGAAAGAAGGCTTTTGGAGGTCAGGTGTGGTGTTGAATACCTTAAAGTTCCGTATCTTCATTTaGAAGACTGGTTGGAATTCT | + |
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Preference number: 5 (lower is better) Translates to: EAVKEGFWRSGVVLNTLKFRIFI*KTGWNS Trigger: AGAATTCCAACCAGTCTTCAAAATGAAGATACGGAA...CTTTAAGGTATTCAACACCACACCTGACCTCCAAAAGCCTTCTTTCACTGCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS TCA 90 bp | CCAAGTAGGGTTCTTAGAACATATGTCAACTGCAACACTGTTTGGTaGAGATGTTTTCTCAAAAACCTTCTCTGGAATGAGGCAGTTGGT | + |
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Preference number: 5 (lower is better) Translates to: PSRVLRTYVNCNTVW*RCFLKNLLWNEAVG Trigger: ACCAACTGCCTCATTCCAGAGAAGGTTTTTGAGAAAACATCTTCACCAAACAGTGTTGCAGTTGACATATGTTCTAAGAACCCTACTTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR CAA 90 bp | TTTTGGAGGTCAGGTGTGGTGTTGAATACCTTAAAGCCCAGCAATCAGAAAACTTCCAAACACCCTTCTTaGTTGAATATAGACACTGCT | + |
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Preference number: 5 (lower is better) Translates to: FWRSGVVLNTLKPSNQKTSKHPS*LNIDTA Trigger: AGCAGTGTCTATATTCAACAAAGAAGGGTGTTTGGA...AGTTTTCTGATTGCTGGGCTTTAAGGTATTCAACACCACACCTGACCTCCAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR CAA 90 bp | AGTATTCTCAGCACTAAATCCATCAGGAGAAGCAGCTTCTCTTACTCCTTTTTCAAATTCATCTTCACATaGTCGAGAACACACAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: SILSTKSIRRSSFSYSFFKFIFT*SRTHSW Trigger: CCAGCTGTGTGTTCTCGACAATGTGAAGATGAATTT...GAAAAAGGAGTAAGAGAAGCTGCTTCTCCTGATGGATTTAGTGCTGAGAATACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS TCA 90 bp | TTGAAGACTGGTTGGAATTCTTTCAAAGCCGCTAACAATTTAATTTaGACTGAAGCCTTTTCAGCTGCTTCGCCATCTGCAAAAACATCG | + |
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Preference number: 5 (lower is better) Translates to: LKTGWNSFKAANNLI*TEAFSAASPSAKTS Trigger: CGATGTTTTTGCAGATGGCGAAGCAGCTGAAAAGGCTTCAGTTCAAATTAAATTGTTAGCGGCTTTGAAAGAATTCCAACCAGTCTTCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR CAA 90 bp | AGATCTGGGATTAAAGGTGTGCACCACCATGTCCAGCATTTTCTACTAATTTCTAAACACCCTTCTTTGTaGAATATAGACACTGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: RSGIKGVHHHVQHFLLISKHPSL*NIDTAL Trigger: CAGAGCAGTGTCTATATTCAACAAAGAAGGGTGTTT...AGAAATTAGTAGAAAATGCTGGACATGGTGGTGCACACCTTTAATCCCAGATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR CAA 90 bp | AGATCTGGGATTAAAGGTGTGCACCACCATGTCCAGCATTTTCTACTAATTTCTCAACTGCAACACTGTTaGGTGAAGATGTTTTCTCAA | + |
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Preference number: 5 (lower is better) Translates to: RSGIKGVHHHVQHFLLISQLQHC*VKMFSQ Trigger: TTGAGAAAACATCTTCACCAAACAGTGTTGCAGTTG...AGAAATTAGTAGAAAATGCTGGACATGGTGGTGCACACCTTTAATCCCAGATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS-3UTR CAA 90 bp | ATTCTGTATCAAATTAAGACAGGAAATGCTGTTACCCAGAGTAACTGCTCAGACAAATTCATCTTCACATaGTCGAGAACACACAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: ILYQIKTGNAVTQSNCSDKFIFT*SRTHSW Trigger: CCAGCTGTGTGTTCTCGACAATGTGAAGATGAATTT...GTCTGAGCAGTTACTCTGGGTAACAGCATTTCCTGTCTTAATTTGATACAGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS GCA 72 bp | CCCGCGCAGGCGCACTCGCGGACCTCGGCGCTCGGGTaGTGGAGCTTCTCCAGAAGCTCCGCCGCGGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: PAQAHSRTSALG*WSFSRSSAAGP Trigger: TGGGCCCGCGGCGGAGCTTCTGGAGAAGCTCCAGCACCCGAGCGCCGAGGTCCGCGAGTGCGCCTGCGCGGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034079.14 |
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| CDS CCA 72 bp | GCGCAGGCGCACTCGCGGACCTCGGCGCTCGGGTGCTaGAGCTTCTCCAGAAGCTCCGCCGCGGGCCCATCG | + |
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Preference number: 6 (lower is better) Translates to: AQAHSRTSALGC*SFSRSSAAGPS Trigger: CGATGGGCCCGCGGCGGAGCTTCTGGAGAAGCTCCAGCACCCGAGCGCCGAGGTCCGCGAGTGCGCCTGCGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034079.14 |
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| CDS GCA 72 bp | TCCCGACGGGCTAAGTCTGGTAGTGCGGGCCGCTGCTaGACTAGCCGGGCCAGTCCCGCGCAGGCGCACTCG | + |
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Preference number: 6 (lower is better) Translates to: SRRAKSGSAGRC*TSRASPAQAHS Trigger: CGAGTGCGCCTGCGCGGGACTGGCCCGGCTAGTGCAGCAGCGGCCCGCACTACCAGACTTAGCCCGTCGGGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034079.14 |
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| CDS GCA 72 bp | GCATCCCGACGGGCTAAGTCTGGTAGTGCGGGCCGCTaGTGCACTAGCCGGGCCAGTCCCGCGCAGGCGCAC | + |
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Preference number: 6 (lower is better) Translates to: ASRRAKSGSAGR*CTSRASPAQAH Trigger: GTGCGCCTGCGCGGGACTGGCCCGGCTAGTGCAGCAGCGGCCCGCACTACCAGACTTAGCCCGTCGGGATGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034079.14 |
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| CDS CCA 72 bp | GGTAAGGGCAGAGTGAATCTCGTGGGACAGGCACAATaGGGACATCAGGTGCCCACTGCACTCACTGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: GKGRVNLVGQAQ*GHQVPTALTEG Trigger: TCCTTCAGTGAGTGCAGTGGGCACCTGATGTCCCCATTGTGCCTGTCCCACGAGATTCACTCTGCCCTTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS CCA 72 bp | CCAGAGCCTCGCCTGTTACCACAAGGGAAGGGTCTTTaGTGGCGACTTCCAGCAGAAAGCACCCAATGGTCT | + |
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Preference number: 6 (lower is better) Translates to: PEPRLLPQGKGL*WRLPAESTQWS Trigger: AGACCATTGGGTGCTTTCTGCTGGAAGTCGCCACCAAAGACCCTTCCCTTGTGGTAACAGGCGAGGCTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS CAA 72 bp | TCCAGAGCCTCGCCTGTTACCACAAGGGAAGGGTCTTaGGTGGCGACTTCCAGCAGAAAGCACCCAATGGTC | + |
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Preference number: 6 (lower is better) Translates to: SRASPVTTREGS*VATSSRKHPMV Trigger: GACCATTGGGTGCTTTCTGCTGGAAGTCGCCACCAAAGACCCTTCCCTTGTGGTAACAGGCGAGGCTCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS CAA 90 bp | AAGAGGGCATCCAGAGCCTCGCCTGTTACCACAAGGGAAGGGTCTTaGGTGGCGACTTCCAGCAGAAAGCACCCAATGGTCTTCAGAGTG | + |
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Preference number: 6 (lower is better) Translates to: KRASRASPVTTREGS*VATSSRKHPMVFRV Trigger: CACTCTGAAGACCATTGGGTGCTTTCTGCTGGAAGTCGCCACCAAAGACCCTTCCCTTGTGGTAACAGGCGAGGCTCTGGATGCCCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS TCA 72 bp | CAGCACATGTTGACAATAACTTCCAGAGCAGTCTGCTaGGCTGTCAGCAACGCCATGGCCTCTCGCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: QHMLTITSRAVC*AVSNAMASRSS Trigger: GGAGCTGCGAGAGGCCATGGCGTTGCTGACAGCTCAGCAGACTGCTCTGGAAGTTATTGTCAACATGTGCTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS CCA 72 bp | GGTCTTTGGTGGCGACTTCCAGCAGAAAGCACCCAATaGTCTTCAGAGTGTCAAGTGTGCCGTCGTCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: GLWWRLPAESTQ*SSECQVCRRLW Trigger: CCAAAGACGACGGCACACTTGACACTCTGAAGACCATTGGGTGCTTTCTGCTGGAAGTCGCCACCAAAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS GCA 72 bp | CTCGAACCCCAATGCTACTGCTATGAATGCCTTCTCTaGACAGCGTCATCAGCTGCTCAGGGGTCATACACT | + |
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Preference number: 6 (lower is better) Translates to: LEPQCYCYECLL*TASSAAQGSYT Trigger: AGTGTATGACCCCTGAGCAGCTGATGACGCTGTGCAGAGAAGGCATTCATAGCAGTAGCATTGGGGTTCGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS TCA 72 bp | AGAGACACTCTCTCAGTAGTGCCACCAGGGGCGTCATaGTGTCCTTTGCCACCATGTCATCACAAACGTCAA | + |
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Preference number: 6 (lower is better) Translates to: RDTLSVVPPGAS*CPLPPCHHKRQ Trigger: TTGACGTTTGTGATGACATGGTGGCAAAGGACATCATGACGCCCCTGGTGGCACTACTGAGAGAGTGTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034079.14 |
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| CDS TCA 72 bp | CTGACCACATTCACTCGAACCCCAATGCTACTGCTATaGATGCCTTCTCTGCACAGCGTCATCAGCTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: LTTFTRTPMLLL*MPSLHSVISCS Trigger: TGAGCAGCTGATGACGCTGTGCAGAGAAGGCATTCATAGCAGTAGCATTGGGGTTCGAGTGAATGTGGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS CAA 90 bp | TTCATCTTCACATTGTCGAGAACACACAGCTGGTCTGGACTGTACTaGCCCCTCCCTTCTTTCCGTATCTTCATTTTGAAGACTGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: FIFTLSRTHSWSGLY*PLPSFRIFILKTGW Trigger: CCAACCAGTCTTCAAAATGAAGATACGGAAAGAAGGGAGGGGCAAGTACAGTCCAGACCAGCTGTGTGTTCTCGACAATGTGAAGATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS TCA 72 bp | GCAGTCTTTAGCCGCTGGGTTTCAGCTTCCTTCATCTaGATGACCATGTTGCCAGTATTCATACCCAGAACT | + |
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Preference number: 6 (lower is better) Translates to: AVFSRWVSASFI*MTMLPVFIPRT Trigger: AGTTCTGGGTATGAATACTGGCAACATGGTCATTCAGATGAAGGAAGCTGAAACCCAGCGGCTAAAGACTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS CCA 72 bp | AACAATACGCTACGGAGACAGCCAGGTCAATACTGGTaGGGAACCTACGTAAGTACTGTAACACAATCTCCA | + |
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Preference number: 6 (lower is better) Translates to: NNTLRRQPGQYW*GTYVSTVTQSP Trigger: TGGAGATTGTGTTACAGTACTTACGTAGGTTCCCCACCAGTATTGACCTGGCTGTCTCCGTAGCGTATTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS CAA 72 bp | ACATTGTCGAGAACACACAGCTGGTCTGGACTGTACTaGCCCCTCCCTTCTTTCCGTATCTTCATTTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: TLSRTHSWSGLY*PLPSFRIFILK Trigger: CTTCAAAATGAAGATACGGAAAGAAGGGAGGGGCAAGTACAGTCCAGACCAGCTGTGTGTTCTCGACAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS TCA 72 bp | TCTTTAGCCGCTGGGTTTCAGCTTCCTTCATCTGAATaGCCATGTTGCCAGTATTCATACCCAGAACTTCAG | + |
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Preference number: 6 (lower is better) Translates to: SLAAGFQLPSSE*PCCQYSYPELQ Trigger: CTGAAGTTCTGGGTATGAATACTGGCAACATGGTCATTCAGATGAAGGAAGCTGAAACCCAGCGGCTAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS CCA 72 bp | GTAAACAATACGCTACGGAGACAGCCAGGTCAATACTaGTGGGGAACCTACGTAAGTACTGTAACACAATCT | + |
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Preference number: 6 (lower is better) Translates to: VNNTLRRQPGQY*WGTYVSTVTQS Trigger: AGATTGTGTTACAGTACTTACGTAGGTTCCCCACCAGTATTGACCTGGCTGTCTCCGTAGCGTATTGTTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS GCA 72 bp | AATCTCCAAACACCCTTCTTTGTTGAATATAGACACTaGTCTGCCACTGCATTCACACACATTCCACAGCAC | + |
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Preference number: 6 (lower is better) Translates to: NLQTPFFVEYRH*SATAFTHIPQH Trigger: GTGCTGTGGAATGTGTGTGAATGCAGTGGCAGAGCAGTGTCTATATTCAACAAAGAAGGGTGTTTGGAGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS CAA 72 bp | TTCTCTTATCAGCTTTCTCCTGTGGAGACATCTCATTaGAATCCAGTCCAGAGAGACACTCTCTCAGTAGTG | + |
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Preference number: 6 (lower is better) Translates to: FSYQLSPVETSH*NPVQRDTLSVV Trigger: CACTACTGAGAGAGTGTCTCTCTGGACTGGATTCAAATGAGATGTCTCCACAGGAGAAAGCTGATAAGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS CAA 72 bp | CATTCACACACATTCCACAGCACATTCACAGCCTCATaGGCTATGCTCTCTACAGGATTTCTCTTATCAGCT | + |
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Preference number: 6 (lower is better) Translates to: HSHTFHSTFTAS*AMLSTGFLLSA Trigger: AGCTGATAAGAGAAATCCTGTAGAGAGCATAGCCAATGAGGCTGTGAATGTGCTGTGGAATGTGTGTGAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS CAA 90 bp | GGGAACCTACGTAAGTACTGTAACACAATCTCCAAACACCCTTCTTaGTTGAATATAGACACTGCTCTGCCACTGCATTCACACACATTC | + |
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Preference number: 6 (lower is better) Translates to: GNLRKYCNTISKHPS*LNIDTALPLHSHTF Trigger: GAATGTGTGTGAATGCAGTGGCAGAGCAGTGTCTATATTCAACAAAGAAGGGTGTTTGGAGATTGTGTTACAGTACTTACGTAGGTTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS TCA 72 bp | TGTACTTGCCCCTCCCTTCTTTCCGTATCTTCATTTTaGAGACTGGTTGGAATTCTTTCAAAGCCGCTAACA | + |
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Preference number: 6 (lower is better) Translates to: CTCPSLLSVSSF*RLVGILSKPLT Trigger: TGTTAGCGGCTTTGAAAGAATTCCAACCAGTCTTCAAAATGAAGATACGGAAAGAAGGGAGGGGCAAGTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS CAA 90 bp | AACCTACGTAAGTACTGTAACACAATCTCCAAACACCCTTCTTTGTaGAATATAGACACTGCTCTGCCACTGCATTCACACACATTCCAC | + |
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Preference number: 6 (lower is better) Translates to: NLRKYCNTISKHPSL*NIDTALPLHSHTFH Trigger: GTGGAATGTGTGTGAATGCAGTGGCAGAGCAGTGTCTATATTCAACAAAGAAGGGTGTTTGGAGATTGTGTTACAGTACTTACGTAGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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| CDS CAA 72 bp | CGTAAGTACTGTAACACAATCTCCAAACACCCTTCTTaGTTGAATATAGACACTGCTCTGCCACTGCATTCA | + |
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Preference number: 6 (lower is better) Translates to: RKYCNTISKHPS*LNIDTALPLHS Trigger: TGAATGCAGTGGCAGAGCAGTGTCTATATTCAACAAAGAAGGGTGTTTGGAGATTGTGTTACAGTACTTACG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034079.14 ENSMUST00000121949.2 |
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