Pregenerated sensors for HDHD5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058979Ensembl transcript IDs: ENSMUST00000075303.7
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TACAGTAAACACTATGGAGAGTGCCAGCCACACCCCTCCCTGGCATaGCACAGCGCTTCCTTCAGTGTGACCAAAGGCTCTCCCTCCACA | + |
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Preference number: 1 (lower is better) Translates to: YSKHYGECQPHPSLA*HSASFSVTKGSPST Trigger: TGTGGAGGGAGAGCCTTTGGTCACACTGAAGGAAGCGCTGTGCCATGCCAGGGAGGGGTGTGGCTGGCACTCTCCATAGTGTTTACTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| 3UTR TCA 90 bp | GGAACTACAATAGTGAGACGCTGTCTGGAAAAAGAAGGTCCTCACTaGGAGGACCTGACACTGAGGCACAGAGGTAAAGGGACCAGCATG | + |
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Preference number: 1 (lower is better) Translates to: GTTIVRRCLEKEGPH*EDLTLRHRGKGTSM Trigger: CATGCTGGTCCCTTTACCTCTGTGCCTCAGTGTCAGGTCCTCTCAGTGAGGACCTTCTTTTTCCAGACAGCGTCTCACTATTGTAGTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| 3UTR-3UTR GCA 90 bp | ACTATGGAGAGTGCCAGCCACACCCCTCCCTGGCATGGCACAGCGCTTCCTTCAAGCATGAGGTCAGACTaGAAGAGACGCACAGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: TMESASHTPPWHGTALPSSMRSD*KRRTGR Trigger: CCTTCCTGTGCGTCTCTTGCAGTCTGACCTCATGCT...TGAAGGAAGCGCTGTGCCATGCCAGGGAGGGGTGTGGCTGGCACTCTCCATAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| 3UTR CAA 90 bp | GCTACAGTCTTCTCTGTCCCAGGAAGTAATGGCAAGAAGCCAGGCTaGGACTTGATGCCTGTGACCCAGACCACAGCCGGGCACACAGGA | + |
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Preference number: 2 (lower is better) Translates to: ATVFSVPGSNGKKPG*DLMPVTQTTAGHTG Trigger: TCCTGTGTGCCCGGCTGTGGTCTGGGTCACAGGCATCAAGTCCAAGCCTGGCTTCTTGCCATTACTTCCTGGGACAGAGAAGACTGTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| 3UTR-3UTR TCA 90 bp | ACTGGGGAGGCAGAGGCAGGCAGATCTGAGTTTCAGGACAACCTGGGCTACATAATCCATCCCTTCTCCTaGGATGCTGCCCCAAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: TGEAEAGRSEFQDNLGYIIHPFS*DAAPRA Trigger: AGCCCTTGGGGCAGCATCTCAGGAGAAGGGATGGAT...TATGTAGCCCAGGTTGTCCTGAAACTCAGATCTGCCTGCCTCTGCCTCCCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| 3UTR-3UTR TCA 90 bp | CTAAAATACAGTAAACACTATGGAGAGTGCCAGCCACACCCCTCCCTGGCATGGGATGGCACCCACCTTTaGTGCCAGCACTGGGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: LKYSKHYGECQPHPSLAWDGTHL*CQHWGG Trigger: GCCTCCCCAGTGCTGGCATCAAAGGTGGGTGCCATC...CCATGCCAGGGAGGGGTGTGGCTGGCACTCTCCATAGTGTTTACTGTATTTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| 3UTR-3UTR GCA 90 bp | GACCAGCATGAGGTCAGACTGCAAGAGACGCACAGGAAGGGCCCAGAAATCCATTCCAACAGCCCCCTCTaGCTCTGCTACATCTCCGTC | + |
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Preference number: 2 (lower is better) Translates to: DQHEVRLQETHRKGPEIHSNSPL*LCYISV Trigger: GACGGAGATGTAGCAGAGGCAGAGGGGGCTGTTGGA...ATGGATTTCTGGGCCCTTCCTGTGCGTCTCTTGCAGTCTGACCTCATGCTGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| 3UTR-3UTR TCA 90 bp | GCACTGGGGAGGCAGAGGCAGGCAGATCTGAGTTTCAGGACAACCTGGGCTACAGCTTTCTGTAGCTACTaGAGCTACAGTCTTCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: ALGRQRQADLSFRTTWATAFCSY*SYSLLC Trigger: ACAGAGAAGACTGTAGCTTCAGTAGCTACAGAAAGC...TGTAGCCCAGGTTGTCCTGAAACTCAGATCTGCCTGCCTCTGCCTCCCCAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| 3UTR-3UTR GCA 90 bp | CTAAAATACAGTAAACACTATGGAGAGTGCCAGCCACACCCCTCCCTGGCATGGTCCCTTCTCCTGAGATaGTGCCCCAAGGGCTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: LKYSKHYGECQPHPSLAWSLLLR*CPKGFL Trigger: CAGAAAGCCCTTGGGGCAGCATCTCAGGAGAAGGGA...CCATGCCAGGGAGGGGTGTGGCTGGCACTCTCCATAGTGTTTACTGTATTTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| 3UTR CAA 90 bp | TTCAGTGTGACCAAAGGCTCTCCCTCCACAAGTTTCCACATAACGTaGCACTGTGCGGTTTTTAAAGTCCTGACTGAGGCAGGTGTGATG | + |
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Preference number: 2 (lower is better) Translates to: FSVTKGSPSTSFHIT*HCAVFKVLTEAGVM Trigger: CATCACACCTGCCTCAGTCAGGACTTTAAAAACCGCACAGTGCAACGTTATGTGGAAACTTGTGGAGGGAGAGCCTTTGGTCACACTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| 3UTR GCA 72 bp | AGACCACAGCCGGGCACACAGGATTCCCTGAGCGCATaGTCCAACAGCCCCCTCTGCCTCTGCTACATCTCC | + |
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Preference number: 3 (lower is better) Translates to: RPQPGTQDSLSA*SNSPLCLCYIS Trigger: GGAGATGTAGCAGAGGCAGAGGGGGCTGTTGGAGCATGCGCTCAGGGAATCCTGTGTGCCCGGCTGTGGTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| 3UTR CCA 72 bp | CACTATGGAGAGTGCCAGCCACACCCCTCCCTGGCATaGCACAGCGCTTCCTTCAGTGTGACCAAAGGCTCT | + |
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Preference number: 3 (lower is better) Translates to: HYGECQPHPSLA*HSASFSVTKGS Trigger: AGAGCCTTTGGTCACACTGAAGGAAGCGCTGTGCCATGCCAGGGAGGGGTGTGGCTGGCACTCTCCATAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| 3UTR GCA 72 bp | AGGCACAGAGGTAAAGGGACCAGCATGAGGTCAGACTaGAAGAGACGCACAGGAAGGGCCCAGAAATCCATC | + |
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Preference number: 3 (lower is better) Translates to: RHRGKGTSMRSD*KRRTGRAQKSI Trigger: GATGGATTTCTGGGCCCTTCCTGTGCGTCTCTTGCAGTCTGACCTCATGCTGGTCCCTTTACCTCTGTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| 3UTR-3UTR CAA 90 bp | ACTATGGAGAGTGCCAGCCACACCCCTCCCTGGCATGGCACAGCGCTTCCTTCAAGTTTCCACATAACGTaGCACTGTGCGGTTTTTAAA | + |
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Preference number: 3 (lower is better) Translates to: TMESASHTPPWHGTALPSSFHIT*HCAVFK Trigger: TTTAAAAACCGCACAGTGCAACGTTATGTGGAAACT...TGAAGGAAGCGCTGTGCCATGCCAGGGAGGGGTGTGGCTGGCACTCTCCATAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR GCA 90 bp | CACCCCTCCCTGGCATGGCACAGCGCTTCCTTCAGTGTGACCAAAGGCTCTCCCCCCCGCCTCTCAGCCTaGTGCCTGATCACGTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: HPSLAWHSASFSVTKGSPPRLSA*CLITSS Trigger: AGAGGACGTGATCAGGCAGCAGGCTGAGAGGCGGGG...GGGAGAGCCTTTGGTCACACTGAAGGAAGCGCTGTGCCATGCCAGGGAGGGGTG 63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR CCA 90 bp | AAACACTATGGAGAGTGCCAGCCACACCCCTCCCTGGCATGGCACAGCGCTTCCGGAAGCCTAGTGCTCTaGCGTTCTCCACCAGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: KHYGECQPHPSLAWHSASGSLVL*RSPPGA Trigger: GGCCCCTGGTGGAGAACGCCAGAGCACTAGGCTTCC...GGAAGCGCTGTGCCATGCCAGGGAGGGGTGTGGCTGGCACTCTCCATAGTGTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR CCA 90 bp | CCAGCCACACCCCTCCCTGGCATGGCACAGCGCTTCCTTCAGTGTGACCAAAGGGCCAGAACAGGCAGGTaGGGATACGGAGCTGTTGCC | + |
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Preference number: 4 (lower is better) Translates to: PATPLPGMAQRFLQCDQRARTGR*GYGAVA Trigger: GGCAACAGCTCCGTATCCCCACCTGCCTGTTCTGGC...CCTTTGGTCACACTGAAGGAAGCGCTGTGCCATGCCAGGGAGGGGTGTGGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR TCA 90 bp | CCTGTGACCCAGACCACAGCCGGGCACACAGGATTCCCTGAGCGCATGCTCCAATCTCAGCCTGCTGCCTaGTCACGTCCTCTGCATACT | + |
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Preference number: 4 (lower is better) Translates to: PVTQTTAGHTGFPERMLQSQPAA*SRPLHT Trigger: AGTATGCAGAGGACGTGATCAGGCAGCAGGCTGAGA...TTGGAGCATGCGCTCAGGGAATCCTGTGTGCCCGGCTGTGGTCTGGGTCACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR TCA 90 bp | CCAGCCACACCCCTCCCTGGCATGGCACAGCGCTTCCTTCAGTGTGACCAAAGGTGGGAGCCTGGGTCCTaGGAACTGTATATGCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: PATPLPGMAQRFLQCDQRWEPGS*ELYMPV Trigger: CACTGGCATATACAGTTCTCAGGACCCAGGCTCCCA...CCTTTGGTCACACTGAAGGAAGCGCTGTGCCATGCCAGGGAGGGGTGTGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR TCA 90 bp | CCTGTGACCCAGACCACAGCCGGGCACACAGGATTCCCTGAGCGCATGCTCCAAGGCTGTGAGAGAGAATaGCTTGGTCTGGATCCACCT | + |
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Preference number: 4 (lower is better) Translates to: PVTQTTAGHTGFPERMLQGCERE*LGLDPP Trigger: AGGTGGATCCAGACCAAGTCATTCTCTCTCACAGCC...TTGGAGCATGCGCTCAGGGAATCCTGTGTGCCCGGCTGTGGTCTGGGTCACAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR GCA 90 bp | ACTATGGAGAGTGCCAGCCACACCCCTCCCTGGCATGGCACAGCGCTTCCTTCATGTTGCCCACCAGTCTaGTGTTCCTCCTCTCCACGA | + |
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Preference number: 4 (lower is better) Translates to: TMESASHTPPWHGTALPSCCPPV*CSSSPR Trigger: TCGTGGAGAGGAGGAACAGCAGACTGGTGGGCAACA...TGAAGGAAGCGCTGTGCCATGCCAGGGAGGGGTGTGGCTGGCACTCTCCATAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR CCA 90 bp | CCAGCCACACCCCTCCCTGGCATGGCACAGCGCTTCCTTCAGTGTGACCAAAGGCAAACCTGGGCATCTTaGCTTCAGCCATCCACAGGA | + |
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Preference number: 4 (lower is better) Translates to: PATPLPGMAQRFLQCDQRQTWAS*LQPSTG Trigger: TCCTGTGGATGGCTGAAGCCAAGATGCCCAGGTTTG...CCTTTGGTCACACTGAAGGAAGCGCTGTGCCATGCCAGGGAGGGGTGTGGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR CCA 90 bp | AAACACTATGGAGAGTGCCAGCCACACCCCTCCCTGGCATGGCACAGCGCTTCCATGGAAGCACAACTCTaGGTTGCTGAAGGCCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: KHYGECQPHPSLAWHSASMEAQL*VAEGRC Trigger: GCAGCGGCCTTCAGCAACCCAGAGTTGTGCTTCCAT...GGAAGCGCTGTGCCATGCCAGGGAGGGGTGTGGCTGGCACTCTCCATAGTGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR TCA 90 bp | CACCCCTCCCTGGCATGGCACAGCGCTTCCTTCAGTGTGACCAAAGGCTCTCCCAGTTTACCAGCTTGCTaGATGCTTCCAGAGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: HPSLAWHSASFSVTKGSPSLPAC*MLPEQL Trigger: CAGCTGCTCTGGAAGCATTCAGCAAGCTGGTAAACT...GGGAGAGCCTTTGGTCACACTGAAGGAAGCGCTGTGCCATGCCAGGGAGGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR TCA 90 bp | CCTGGCATGGCACAGCGCTTCCTTCAGTGTGACCAAAGGCTCTCCCTCCACAAGGCACCTCAGCAGGTCTaGCAGTTCCTGGGCTTTGTT | + |
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Preference number: 4 (lower is better) Translates to: PGMAQRFLQCDQRLSLHKAPQQV*QFLGFV Trigger: AACAAAGCCCAGGAACTGTCAGACCTGCTGAGGTGC...CTTGTGGAGGGAGAGCCTTTGGTCACACTGAAGGAAGCGCTGTGCCATGCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR GCA 90 bp | GCACTGGGGAGGCAGAGGCAGGCAGATCTGAGTTTCAGGACAACCTGGGCTACAGGTCTGGATCCACCTTaGACCTCAGCAGGTCTGACA | + |
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Preference number: 4 (lower is better) Translates to: ALGRQRQADLSFRTTWATGLDPP*TSAGLT Trigger: TGTCAGACCTGCTGAGGTGCAAGGTGGATCCAGACC...TGTAGCCCAGGTTGTCCTGAAACTCAGATCTGCCTGCCTCTGCCTCCCCAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR GCA 90 bp | CTGTCTGGAAAAAGAAGGTCCTCACTGAGAGGACCTGACACTGAGGCACAGAGGGGGATACGGAGCTGTTaGCAGGCCAGTTCCGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: LSGKRRSSLRGPDTEAQRGIRSC*QASSGV Trigger: CACCCCGGAACTGGCCTGGCAACAGCTCCGTATCCC...CCTCTGTGCCTCAGTGTCAGGTCCTCTCAGTGAGGACCTTCTTTTTCCAGACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR GCA 90 bp | AAAGTCCTGACTGAGGCAGGTGTGATGGCACCCACCTTTGATGCCAGCACTGGGGTTGCTGAAGGCCGCTaGTTCTGTTGCCCACCAGTC | + |
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Preference number: 4 (lower is better) Translates to: KVLTEAGVMAPTFDASTGVAEGR*FCCPPV Trigger: GACTGGTGGGCAACAGAAGCAGCGGCCTTCAGCAAC...CCCAGTGCTGGCATCAAAGGTGGGTGCCATCACACCTGCCTCAGTCAGGACTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR CCA 90 bp | AGCATGAGGTCAGACTGCAAGAGACGCACAGGAAGGGCCCAGAAATCCATCCCTTGTCTCCCAGCGGACTaGCTCCCCAAGAAGGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: SMRSDCKRRTGRAQKSIPCLPAD*LPKKED Trigger: GTCCTCCTTCTTGGGGAGCCAGTCCGCTGGGAGACA...AGGGATGGATTTCTGGGCCCTTCCTGTGCGTCTCTTGCAGTCTGACCTCATGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR CCA 90 bp | AAACACTATGGAGAGTGCCAGCCACACCCCTCCCTGGCATGGCACAGCGCTTCCTGCCATGACCAAACCTaGGCATCTTGGCTTCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: KHYGECQPHPSLAWHSASCHDQT*ASWLQP Trigger: TGGCTGAAGCCAAGATGCCCAGGTTTGGTCATGGCA...GGAAGCGCTGTGCCATGCCAGGGAGGGGTGTGGCTGGCACTCTCCATAGTGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR GCA 90 bp | AGCATGAGGTCAGACTGCAAGAGACGCACAGGAAGGGCCCAGAAATCCATCCCTACAGGTACCCTCAGCTaGCCCTGGGAGTTTACCAGC | + |
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Preference number: 4 (lower is better) Translates to: SMRSDCKRRTGRAQKSIPTGTLS*PWEFTS Trigger: GCTGGTAAACTCCCAGGGGCAGCTGAGGGTACCTGT...AGGGATGGATTTCTGGGCCCTTCCTGTGCGTCTCTTGCAGTCTGACCTCATGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR CCA 90 bp | CTGACTGAGGCAGGTGTGATGGCACCCACCTTTGATGCCAGCACTGGGGAGGCAATTGTCACCACATTCTaGAAGCCTAGTGCTCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: LTEAGVMAPTFDASTGEAIVTTF*KPSALA Trigger: CGCCAGAGCACTAGGCTTCCAGAATGTGGTGACAAT...TGCCTCCCCAGTGCTGGCATCAAAGGTGGGTGCCATCACACCTGCCTCAGTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| 3UTR CAA 72 bp | TTCTCTGTCCCAGGAAGTAATGGCAAGAAGCCAGGCTaGGACTTGATGCCTGTGACCCAGACCACAGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: FSVPGSNGKKPG*DLMPVTQTTAG Trigger: CCCGGCTGTGGTCTGGGTCACAGGCATCAAGTCCAAGCCTGGCTTCTTGCCATTACTTCCTGGGACAGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR GCA 90 bp | GTAAACACTATGGAGAGTGCCAGCCACACCCCTCCCTGGCATGGCACAGCGCTTACATCCATAATCAGCTaGAGGTTTGTCTCCCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: VNTMESASHTPPWHGTALTSIIS*RFVSQR Trigger: CCGCTGGGAGACAAACCTGCAGCTGATTATGGATGT...AAGCGCTGTGCCATGCCAGGGAGGGGTGTGGCTGGCACTCTCCATAGTGTTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR CCA 90 bp | GACCAGCATGAGGTCAGACTGCAAGAGACGCACAGGAAGGGCCCAGAAATCCATCAAGCCCAACCCTCCTaGTGGAAAACCAGCTGCACA | + |
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Preference number: 4 (lower is better) Translates to: DQHEVRLQETHRKGPEIHQAQPS*WKTSCT Trigger: TGTGCAGCTGGTTTTCCACCAGGAGGGTTGGGCTTG...ATGGATTTCTGGGCCCTTCCTGTGCGTCTCTTGCAGTCTGACCTCATGCTGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR TCA 90 bp | TCTGTAGCTACTGAAGCTACAGTCTTCTCTGTCCCAGGAAGTAATGGCAAGAAGGTCTTCGGCCGCCGCTaGAGGTCCACCATGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: SVATEATVFSVPGSNGKKVFGRR*RSTMSS Trigger: GCTGGACATGGTGGACCTTCAGCGGCGGCCGAAGAC...CTTCTTGCCATTACTTCCTGGGACAGAGAAGACTGTAGCTTCAGTAGCTACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR TCA 90 bp | CTGTCTGGAAAAAGAAGGTCCTCACTGAGAGGACCTGACACTGAGGCACAGAGGACAACTCTGGGTTGCTaGAGGCCGCTGCTTCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: LSGKRRSSLRGPDTEAQRTTLGC*RPLLLL Trigger: CAACAGAAGCAGCGGCCTTCAGCAACCCAGAGTTGT...CCTCTGTGCCTCAGTGTCAGGTCCTCTCAGTGAGGACCTTCTTTTTCCAGACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR GCA 90 bp | GACCAGCATGAGGTCAGACTGCAAGAGACGCACAGGAAGGGCCCAGAAATCCATGGCAAAGCAGAAAGGTaGCATGACCAAACCTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: DQHEVRLQETHRKGPEIHGKAER*HDQTWA Trigger: TGCCCAGGTTTGGTCATGGCACCTTTCTGCTTTGCC...ATGGATTTCTGGGCCCTTCCTGTGCGTCTCTTGCAGTCTGACCTCATGCTGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR GCA 90 bp | GCACTGGGGAGGCAGAGGCAGGCAGATCTGAGTTTCAGGACAACCTGGGCTACACCTGAGAACTGTATATaGCAGTGCATACCAGGATGG | + |
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Preference number: 4 (lower is better) Translates to: ALGRQRQADLSFRTTWATPENCI*QCIPGW Trigger: CCATCCTGGTATGCACTGGCATATACAGTTCTCAGG...TGTAGCCCAGGTTGTCCTGAAACTCAGATCTGCCTGCCTCTGCCTCCCCAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR CCA 90 bp | CCTGAGATGCTGCCCCAAGGGCTTTCTGTAGCTACTGAAGCTACAGTCTTCTCTGCTGGGATCACTCTGTaGCCTCGAACCAGCACTCCA | + |
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Preference number: 4 (lower is better) Translates to: PEMLPQGLSVATEATVFSAGITL*PRTSTP Trigger: TGGAGTGCTGGTTCGAGGCCACAGAGTGATCCCAGC...AGAGAAGACTGTAGCTTCAGTAGCTACAGAAAGCCCTTGGGGCAGCATCTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR CCA 90 bp | CCTGAGATGCTGCCCCAAGGGCTTTCTGTAGCTACTGAAGCTACAGTCTTCTCTTGCTTCCAGAGCAGCTaGGATCACTCTGTGGCCTCG | + |
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Preference number: 4 (lower is better) Translates to: PEMLPQGLSVATEATVFSCFQSS*DHSVAS Trigger: CGAGGCCACAGAGTGATCCCAGCTGCTCTGGAAGCA...AGAGAAGACTGTAGCTTCAGTAGCTACAGAAAGCCCTTGGGGCAGCATCTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR CCA 90 bp | CTGCCCCAAGGGCTTTCTGTAGCTACTGAAGCTACAGTCTTCTCTGTCCCAGGAGGAGGACCCCTTCAATaGCAGGGAAGTCACTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: LPQGLSVATEATVFSVPGGGPLQ*QGSHSS Trigger: TGAGGAGTGACTTCCCTGCCATTGAAGGGGTCCTCC...TCCTGGGACAGAGAAGACTGTAGCTTCAGTAGCTACAGAAAGCCCTTGGGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR CCA 90 bp | CTGGCATGGCACAGCGCTTCCTTCAGTGTGACCAAAGGCTCTCCCTCCACAAGTAAGTCTCGGTGTCCGTaGAATGGAAGCTCTCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: LAWHSASFSVTKGSPSTSKSRCP*NGSSLL Trigger: AAGGAGAGAGCTTCCATTCCACGGACACCGAGACTT...ACTTGTGGAGGGAGAGCCTTTGGTCACACTGAAGGAAGCGCTGTGCCATGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR TCA 90 bp | GACCAGCATGAGGTCAGACTGCAAGAGACGCACAGGAAGGGCCCAGAAATCCATTGTTCCCAGCATTTGTaGCAAAAACCACAGGTACCC | + |
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Preference number: 4 (lower is better) Translates to: DQHEVRLQETHRKGPEIHCSQHL*QKPQVP Trigger: GGGTACCTGTGGTTTTTGTCACAAATGCTGGGAACA...ATGGATTTCTGGGCCCTTCCTGTGCGTCTCTTGCAGTCTGACCTCATGCTGGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR TCA 90 bp | CTAAAATACAGTAAACACTATGGAGAGTGCCAGCCACACCCCTCCCTGGCATGGAGCAGAAAGGTGCCATaGCCAAACCTGGGCATCTTG | + |
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Preference number: 4 (lower is better) Translates to: LKYSKHYGECQPHPSLAWSRKVP*PNLGIL Trigger: CAAGATGCCCAGGTTTGGTCATGGCACCTTTCTGCT...CCATGCCAGGGAGGGGTGTGGCTGGCACTCTCCATAGTGTTTACTGTATTTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR GCA 90 bp | GCACTGGGGAGGCAGAGGCAGGCAGATCTGAGTTTCAGGACAACCTGGGCTACATGGGCTTTGTTATGCTaGAAGATGTTCCCAGCATTT | + |
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Preference number: 4 (lower is better) Translates to: ALGRQRQADLSFRTTWATWALLC*KMFPAF Trigger: AAATGCTGGGAACATCTTGCAGCATAACAAAGCCCA...TGTAGCCCAGGTTGTCCTGAAACTCAGATCTGCCTGCCTCTGCCTCCCCAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR CCA 90 bp | CTGCCCCAAGGGCTTTCTGTAGCTACTGAAGCTACAGTCTTCTCTGTCCCAGGAGAGAATGACTTGGTCTaGATCCACCTTGCACCTCAG | + |
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Preference number: 4 (lower is better) Translates to: LPQGLSVATEATVFSVPGENDLV*IHLAPQ Trigger: CTGAGGTGCAAGGTGGATCCAGACCAAGTCATTCTC...TCCTGGGACAGAGAAGACTGTAGCTTCAGTAGCTACAGAAAGCCCTTGGGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR GCA 90 bp | GACCAGCATGAGGTCAGACTGCAAGAGACGCACAGGAAGGGCCCAGAAATCCATACACTAGCATCTGTTTaGTGTGGTACTGCAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: DQHEVRLQETHRKGPEIHTLASV*CGTAGR Trigger: TCTTCCTGCAGTACCACAGCAAACAGATGCTAGTGT...ATGGATTTCTGGGCCCTTCCTGTGCGTCTCTTGCAGTCTGACCTCATGCTGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR CCA 90 bp | AACTACAATAGTGAGACGCTGTCTGGAAAAAGAAGGTCCTCACTGAGAGGACCTACCCTCAGCTGCCCCTaGGAGTTTACCAGCTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: NYNSETLSGKRRSSLRGPTLSCP*EFTSLL Trigger: CAGCAAGCTGGTAAACTCCCAGGGGCAGCTGAGGGT...AGGTCCTCTCAGTGAGGACCTTCTTTTTCCAGACAGCGTCTCACTATTGTAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR GCA 90 bp | CTAAAATACAGTAAACACTATGGAGAGTGCCAGCCACACCCCTCCCTGGCATGGTCCTGGGCTTTGTTATaGTGCAAGATGTTCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LKYSKHYGECQPHPSLAWSWALL*CKMFPA Trigger: TGCTGGGAACATCTTGCAGCATAACAAAGCCCAGGA...CCATGCCAGGGAGGGGTGTGGCTGGCACTCTCCATAGTGTTTACTGTATTTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR GCA 90 bp | CTACTGAAGCTACAGTCTTCTCTGTCCCAGGAAGTAATGGCAAGAAGCCAGGCTTGTTTGCTGTGGTACTaGAGGAAGAGCTTCATGGGG | + |
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Preference number: 4 (lower is better) Translates to: LLKLQSSLSQEVMARSQACLLWY*RKSFMG Trigger: CCCCATGAAGCTCTTCCTGCAGTACCACAGCAAACA...AGCCTGGCTTCTTGCCATTACTTCCTGGGACAGAGAAGACTGTAGCTTCAGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR GCA 90 bp | CTGTCTGGAAAAAGAAGGTCCTCACTGAGAGGACCTGACACTGAGGCACAGAGGCCTGATCACGTCCTCTaGATACTGGTAAGTAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSGKRRSSLRGPDTEAQRPDHVL*ILVSKD Trigger: ATCCTTACTTACCAGTATGCAGAGGACGTGATCAGG...CCTCTGTGCCTCAGTGTCAGGTCCTCTCAGTGAGGACCTTCTTTTTCCAGACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR CCA 90 bp | CTAAAATACAGTAAACACTATGGAGAGTGCCAGCCACACCCCTCCCTGGCATGGAGGTCTGACAGTTCCTaGGCTTTGTTATGCTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LKYSKHYGECQPHPSLAWRSDSS*ALLCCK Trigger: CTTGCAGCATAACAAAGCCCAGGAACTGTCAGACCT...CCATGCCAGGGAGGGGTGTGGCTGGCACTCTCCATAGTGTTTACTGTATTTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR CCA 90 bp | AACTACAATAGTGAGACGCTGTCTGGAAAAAGAAGGTCCTCACTGAGAGGACCTAGGCACTTGGGAGCCTaGGTCCTGAGAACTGTATAT | + |
|
Preference number: 4 (lower is better) Translates to: NYNSETLSGKRRSSLRGPRHLGA*VLRTVY Trigger: ATATACAGTTCTCAGGACCCAGGCTCCCAAGTGCCT...AGGTCCTCTCAGTGAGGACCTTCTTTTTCCAGACAGCGTCTCACTATTGTAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR CCA 90 bp | TCTGTAGCTACTGAAGCTACAGTCTTCTCTGTCCCAGGAAGTAATGGCAAGAAGAGCATCTGTTTGCTGTaGTACTGCAGGAAGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SVATEATVFSVPGSNGKKSICLL*YCRKSF Trigger: GAAGCTCTTCCTGCAGTACCACAGCAAACAGATGCT...CTTCTTGCCATTACTTCCTGGGACAGAGAAGACTGTAGCTTCAGTAGCTACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR CCA 90 bp | CTAAAATACAGTAAACACTATGGAGAGTGCCAGCCACACCCCTCCCTGGCATGGTTATTTTCCGGTAGATaGTTTCCAGGCAAAGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LKYSKHYGECQPHPSLAWLFSGR*FPGKAE Trigger: TTCTGCTTTGCCTGGAAACCATCTACCGGAAAATAA...CCATGCCAGGGAGGGGTGTGGCTGGCACTCTCCATAGTGTTTACTGTATTTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS CCA 90 bp | GGCCTCGAACCAGCACTCCATCAATGTCGAACAGTAAGCCAAAGGTaGGAGAACGCTCAGCGCTGCCCGCGATGTAGCCCCTCCGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GLEPALHQCRTVSQR*ENAQRCPRCSPSGA Trigger: GGCCCCGGAGGGGCTACATCGCGGGCAGCGCTGAGCGTTCTCCCACCTTTGGCTTACTGTTCGACATTGATGGAGTGCTGGTTCGAGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS CCA 90 bp | TTGTCTCCCAGCGGACTGGCTCCCCAAGAAGGAGGACCCCTTCAATaGCAGGGAAGTCACTCCTCAGGCGCATGGTCTTCGGCCGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: LSPSGLAPQEGGPLQ*QGSHSSGAWSSAAA Trigger: AGCGGCGGCCGAAGACCATGCGCCTGAGGAGTGACTTCCCTGCCATTGAAGGGGTCCTCCTTCTTGGGGAGCCAGTCCGCTGGGAGACAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS TCA 90 bp | ATGGCAGGGAAGTCACTCCTCAGGCGCATGGTCTTCGGCCGCCGCTaGAGGTCCACCATGTCCAGCTCTGGGAAGGCTAACCGCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: MAGKSLLRRMVFGRR*RSTMSSSGKANRSS Trigger: TGAGCTGCGGTTAGCCTTCCCAGAGCTGGACATGGTGGACCTTCAGCGGCGGCCGAAGACCATGCGCCTGAGGAGTGACTTCCCTGCCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS GCA 90 bp | GGCGGCCCAGCCCCGCCTCTCAGCCTGCTGCCTGATCACGTCCTCTaGATACTGGTAAGTAAGGATGCTGGGTTTGCCCATCAGACCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GGPAPPLSLLPDHVL*ILVSKDAGFAHQTL Trigger: GAGGGTCTGATGGGCAAACCCAGCATCCTTACTTACCAGTATGCAGAGGACGTGATCAGGCAGCAGGCTGAGAGGCGGGGCTGGGCCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS CCA 90 bp | GAAGGAGGACCCCTTCAATGGCAGGGAAGTCACTCCTCAGGCGCATaGTCTTCGGCCGCCGCTGAAGGTCCACCATGTCCAGCTCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: EGGPLQWQGSHSSGA*SSAAAEGPPCPALG Trigger: TCCCAGAGCTGGACATGGTGGACCTTCAGCGGCGGCCGAAGACCATGCGCCTGAGGAGTGACTTCCCTGCCATTGAAGGGGTCCTCCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR CAA 90 bp | CACCCCTCCCTGGCATGGCACAGCGCTTCCTTCAGTGTGACCAAAGGCTCTCCCTGGTCTGGATCCACCTaGCACCTCAGCAGGTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: HPSLAWHSASFSVTKGSPWSGST*HLSRSD Trigger: GTCAGACCTGCTGAGGTGCAAGGTGGATCCAGACCA...GGGAGAGCCTTTGGTCACACTGAAGGAAGCGCTGTGCCATGCCAGGGAGGGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS CCA 90 bp | AGCTCTGGGAAGGCTAACCGCAGCTCATCTATTGTCACCACATTCTaGAAGCCTAGTGCTCTGGCGTTCTCCACCAGGGGCCCCTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSGKANRSSSIVTTF*KPSALAFSTRGPCP Trigger: GGGGCAGGGGCCCCTGGTGGAGAACGCCAGAGCACTAGGCTTCCAGAATGTGGTGACAATAGATGAGCTGCGGTTAGCCTTCCCAGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS GCA 90 bp | CACAGGTACCCTCAGCTGCCCCTGGGAGTTTACCAGCTTGCTGAATaGTTCCAGAGCAGCTGGGATCACTCTGTGGCCTCGAACCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: HRYPQLPLGVYQLAE*FQSSWDHSVASNQH Trigger: GTGCTGGTTCGAGGCCACAGAGTGATCCCAGCTGCTCTGGAAGCATTCAGCAAGCTGGTAAACTCCCAGGGGCAGCTGAGGGTACCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS CCA 90 bp | GAGGCTTCTAGGAGCCCTGGACTGAAGCTGAAGTCTCGGTGTCCGTaGAATGGAAGCTCTCTCCTTCCAGGAGGAGGCACTTGGGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: EASRSPGLKLKSRCP*NGSSLLPGGGTWEP Trigger: AGGCTCCCAAGTGCCTCCTCCTGGAAGGAGAGAGCTTCCATTCCACGGACACCGAGACTTCAGCTTCAGTCCAGGGCTCCTAGAAGCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR CAA 90 bp | ACTATGGAGAGTGCCAGCCACACCCCTCCCTGGCATGGCACAGCGCTTCCTTCAAAGCACAACTCTGGGTaGCTGAAGGCCGCTGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TMESASHTPPWHGTALPSKHNSG*LKAAAS Trigger: AGAAGCAGCGGCCTTCAGCAACCCAGAGTTGTGCTT...TGAAGGAAGCGCTGTGCCATGCCAGGGAGGGGTGTGGCTGGCACTCTCCATAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS GCA 90 bp | CCAGTTCCGGGGTGGCCGTTACTAAGAAGGACATCCATAATCAGCTaGAGGTTTGTCTCCCAGCGGACTGGCTCCCCAAGAAGGAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: PVPGWPLLRRTSIIS*RFVSQRTGSPRRRT Trigger: GGTCCTCCTTCTTGGGGAGCCAGTCCGCTGGGAGACAAACCTGCAGCTGATTATGGATGTCCTTCTTAGTAACGGCCACCCCGGAACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS GCA 90 bp | GTCCATGTTGCTAGCCAGAACAGGCAGGTGGGGATACGGAGCTGTTaGCAGGCCAGTTCCGGGGTGGCCGTTACTAAGAAGGACATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VHVASQNRQVGIRSC*QASSGVAVTKKDIH Trigger: ATGGATGTCCTTCTTAGTAACGGCCACCCCGGAACTGGCCTGGCAACAGCTCCGTATCCCCACCTGCCTGTTCTGGCTAGCAACATGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR CAA 90 bp | ACTGGGGAGGCAGAGGCAGGCAGATCTGAGTTTCAGGACAACCTGGGCTACATAAGGCCGCTGCTTCTGTaGCCCACCAGTCTGCTGTTC | + |
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Preference number: 5 (lower is better) Translates to: TGEAEAGRSEFQDNLGYIRPLLL*PTSLLF Trigger: GAACAGCAGACTGGTGGGCAACAGAAGCAGCGGCCT...TATGTAGCCCAGGTTGTCCTGAAACTCAGATCTGCCTGCCTCTGCCTCCCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR CAA 90 bp | CTGTCTGGAAAAAGAAGGTCCTCACTGAGAGGACCTGACACTGAGGCACAGAGGTCCAGGAGGAGGCACTaGGGAGCCTGGGTCCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LSGKRRSSLRGPDTEAQRSRRRH*GAWVLR Trigger: TCTCAGGACCCAGGCTCCCAAGTGCCTCCTCCTGGA...CCTCTGTGCCTCAGTGTCAGGTCCTCTCAGTGAGGACCTTCTTTTTCCAGACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS TCA 90 bp | AAACCACAGGTACCCTCAGCTGCCCCTGGGAGTTTACCAGCTTGCTaGATGCTTCCAGAGCAGCTGGGATCACTCTGTGGCCTCGAACCA | + |
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Preference number: 5 (lower is better) Translates to: KPQVPSAAPGSLPAC*MLPEQLGSLCGLEP Trigger: TGGTTCGAGGCCACAGAGTGATCCCAGCTGCTCTGGAAGCATTCAGCAAGCTGGTAAACTCCCAGGGGCAGCTGAGGGTACCTGTGGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS GCA 90 bp | GAGGAGGCACTTGGGAGCCTGGGTCCTGAGAACTGTATATGCCAGTaGATACCAGGATGGAAGCACAACTCTGGGTTGCTGAAGGCCGCT | + |
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Preference number: 5 (lower is better) Translates to: EEALGSLGPENCICQ*IPGWKHNSGLLKAA Trigger: AGCGGCCTTCAGCAACCCAGAGTTGTGCTTCCATCCTGGTATGCACTGGCATATACAGTTCTCAGGACCCAGGCTCCCAAGTGCCTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS CCA 90 bp | ACAGGCAGGTGGGGATACGGAGCTGTTGCCAGGCCAGTTCCGGGGTaGCCGTTACTAAGAAGGACATCCATAATCAGCTGCAGGTTTGTC | + |
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Preference number: 5 (lower is better) Translates to: TGRWGYGAVARPVPG*PLLRRTSIISCRFV Trigger: GACAAACCTGCAGCTGATTATGGATGTCCTTCTTAGTAACGGCCACCCCGGAACTGGCCTGGCAACAGCTCCGTATCCCCACCTGCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR CAA 90 bp | TGGCAAGAAGCCAGGCTTGGACTTGATGCCTGTGACCCAGACCACAGCCGGGCAGTGAGAGAGAATGACTaGGTCTGGATCCACCTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: WQEARLGLDACDPDHSRAVREND*VWIHLA Trigger: TGCAAGGTGGATCCAGACCAAGTCATTCTCTCTCAC...TGCCCGGCTGTGGTCTGGGTCACAGGCATCAAGTCCAAGCCTGGCTTCTTGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR CAA 90 bp | GACCAGCATGAGGTCAGACTGCAAGAGACGCACAGGAAGGGCCCAGAAATCCATCCAAACCTGGGCATCTaGGCTTCAGCCATCCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: DQHEVRLQETHRKGPEIHPNLGI*ASAIHR Trigger: CCTGTGGATGGCTGAAGCCAAGATGCCCAGGTTTGG...ATGGATTTCTGGGCCCTTCCTGTGCGTCTCTTGCAGTCTGACCTCATGCTGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS TCA 90 bp | GGAAGCTCTCTCCTTCCAGGAGGAGGCACTTGGGAGCCTGGGTCCTaGGAACTGTATATGCCAGTGCATACCAGGATGGAAGCACAACTC | + |
|
Preference number: 5 (lower is better) Translates to: GSSLLPGGGTWEPGS*ELYMPVHTRMEAQL Trigger: GAGTTGTGCTTCCATCCTGGTATGCACTGGCATATACAGTTCTCAGGACCCAGGCTCCCAAGTGCCTCCTCCTGGAAGGAGAGAGCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS CCA 90 bp | GTGGAATGGAAGCTCTCTCCTTCCAGGAGGAGGCACTTGGGAGCCTaGGTCCTGAGAACTGTATATGCCAGTGCATACCAGGATGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: VEWKLSPSRRRHLGA*VLRTVYASAYQDGS Trigger: GCTTCCATCCTGGTATGCACTGGCATATACAGTTCTCAGGACCCAGGCTCCCAAGTGCCTCCTCCTGGAAGGAGAGAGCTTCCATTCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS GCA 90 bp | TTCCAGGAGGAGGCACTTGGGAGCCTGGGTCCTGAGAACTGTATATaGCAGTGCATACCAGGATGGAAGCACAACTCTGGGTTGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FQEEALGSLGPENCI*QCIPGWKHNSGLLK Trigger: CTTCAGCAACCCAGAGTTGTGCTTCCATCCTGGTATGCACTGGCATATACAGTTCTCAGGACCCAGGCTCCCAAGTGCCTCCTCCTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR CAA 90 bp | CTGGCATGGCACAGCGCTTCCTTCAGTGTGACCAAAGGCTCTCCCTCCACAAGTACCGCAGCTCATCTATaGTCACCACATTCTGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LAWHSASFSVTKGSPSTSTAAHL*SPHSGS Trigger: GCTTCCAGAATGTGGTGACAATAGATGAGCTGCGGT...ACTTGTGGAGGGAGAGCCTTTGGTCACACTGAAGGAAGCGCTGTGCCATGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS TCA 90 bp | TGCTGTGGTACTGCAGGAAGAGCTTCATGGGGCTGTGAGAGAGAATaGCTTGGTCTGGATCCACCTTGCACCTCAGCAGGTCTGACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: CCGTAGRASWGCERE*LGLDPPCTSAGLTV Trigger: AACTGTCAGACCTGCTGAGGTGCAAGGTGGATCCAGACCAAGTCATTCTCTCTCACAGCCCCATGAAGCTCTTCCTGCAGTACCACAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS TCA 90 bp | AGCATCTGTTTGCTGTGGTACTGCAGGAAGAGCTTCATGGGGCTGTaGGAGAGAATGACTTGGTCTGGATCCACCTTGCACCTCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SICLLWYCRKSFMGL*ERMTWSGSTLHLSR Trigger: CCTGCTGAGGTGCAAGGTGGATCCAGACCAAGTCATTCTCTCTCACAGCCCCATGAAGCTCTTCCTGCAGTACCACAGCAAACAGATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS CCA 90 bp | TTCCCAGCATTTGTGACAAAAACCACAGGTACCCTCAGCTGCCCCTaGGAGTTTACCAGCTTGCTGAATGCTTCCAGAGCAGCTGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: FPAFVTKTTGTLSCP*EFTSLLNASRAAGI Trigger: GATCCCAGCTGCTCTGGAAGCATTCAGCAAGCTGGTAAACTCCCAGGGGCAGCTGAGGGTACCTGTGGTTTTTGTCACAAATGCTGGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS CCA 90 bp | GCTGCTTCTGTTGCCCACCAGTCTGCTGTTCCTCCTCTCCACGATTaGCCATTTGCAGGTACTGATGGAATAGGTTGGCACCGTAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: AASVAHQSAVPPLHD*PFAGTDGIGWHRRH Trigger: ATGTCTACGGTGCCAACCTATTCCATCAGTACCTGCAAATGGCCAATCGTGGAGAGGAGGAACAGCAGACTGGTGGGCAACAGAAGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR CAA 90 bp | CTGCCCCAAGGGCTTTCTGTAGCTACTGAAGCTACAGTCTTCTCTGTCCCAGGAGTAAGGATGCTGGGTTaGCCCATCAGACCCTCGTAT | + |
|
Preference number: 5 (lower is better) Translates to: LPQGLSVATEATVFSVPGVRMLG*PIRPSY Trigger: ATACGAGGGTCTGATGGGCAAACCCAGCATCCTTAC...TCCTGGGACAGAGAAGACTGTAGCTTCAGTAGCTACAGAAAGCCCTTGGGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS GCA 90 bp | AAGATGTTCCCAGCATTTGTGACAAAAACCACAGGTACCCTCAGCTaGCCCTGGGAGTTTACCAGCTTGCTGAATGCTTCCAGAGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: KMFPAFVTKTTGTLS*PWEFTSLLNASRAA Trigger: AGCTGCTCTGGAAGCATTCAGCAAGCTGGTAAACTCCCAGGGGCAGCTGAGGGTACCTGTGGTTTTTGTCACAAATGCTGGGAACATCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS CCA 90 bp | TTTACCAGCTTGCTGAATGCTTCCAGAGCAGCTGGGATCACTCTGTaGCCTCGAACCAGCACTCCATCAATGTCGAACAGTAAGCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: FTSLLNASRAAGITL*PRTSTPSMSNSKPK Trigger: CTTTGGCTTACTGTTCGACATTGATGGAGTGCTGGTTCGAGGCCACAGAGTGATCCCAGCTGCTCTGGAAGCATTCAGCAAGCTGGTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS TCA 90 bp | ACAGTTCCTGGGCTTTGTTATGCTGCAAGATGTTCCCAGCATTTGTaGCAAAAACCACAGGTACCCTCAGCTGCCCCTGGGAGTTTACCA | + |
|
Preference number: 5 (lower is better) Translates to: TVPGLCYAARCSQHL*QKPQVPSAAPGSLP Trigger: TGGTAAACTCCCAGGGGCAGCTGAGGGTACCTGTGGTTTTTGTCACAAATGCTGGGAACATCTTGCAGCATAACAAAGCCCAGGAACTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS TCA 90 bp | AGAGAGAATGACTTGGTCTGGATCCACCTTGCACCTCAGCAGGTCTaGCAGTTCCTGGGCTTTGTTATGCTGCAAGATGTTCCCAGCATT | + |
|
Preference number: 5 (lower is better) Translates to: RENDLVWIHLAPQQV*QFLGFVMLQDVPSI Trigger: AATGCTGGGAACATCTTGCAGCATAACAAAGCCCAGGAACTGTCAGACCTGCTGAGGTGCAAGGTGGATCCAGACCAAGTCATTCTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS GCA 90 bp | ACCTTGCACCTCAGCAGGTCTGACAGTTCCTGGGCTTTGTTATGCTaGAAGATGTTCCCAGCATTTGTGACAAAAACCACAGGTACCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TLHLSRSDSSWALLC*KMFPAFVTKTTGTL Trigger: GAGGGTACCTGTGGTTTTTGTCACAAATGCTGGGAACATCTTGCAGCATAACAAAGCCCAGGAACTGTCAGACCTGCTGAGGTGCAAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS GCA 90 bp | TCCACCTTGCACCTCAGCAGGTCTGACAGTTCCTGGGCTTTGTTATaGTGCAAGATGTTCCCAGCATTTGTGACAAAAACCACAGGTACC | + |
|
Preference number: 5 (lower is better) Translates to: STLHLSRSDSSWALL*CKMFPAFVTKTTGT Trigger: GGTACCTGTGGTTTTTGTCACAAATGCTGGGAACATCTTGCAGCATAACAAAGCCCAGGAACTGTCAGACCTGCTGAGGTGCAAGGTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS-3UTR CAA 90 bp | CTAAAATACAGTAAACACTATGGAGAGTGCCAGCCACACCCCTCCCTGGCATGGGACAGTTCCTGGGCTTaGTTATGCTGCAAGATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LKYSKHYGECQPHPSLAWDSSWA*LCCKMF Trigger: GAACATCTTGCAGCATAACAAAGCCCAGGAACTGTC...CCATGCCAGGGAGGGGTGTGGCTGGCACTCTCCATAGTGTTTACTGTATTTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS CCA 90 bp | ACTTGGTCTGGATCCACCTTGCACCTCAGCAGGTCTGACAGTTCCTaGGCTTTGTTATGCTGCAAGATGTTCCCAGCATTTGTGACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: TWSGSTLHLSRSDSS*ALLCCKMFPAFVTK Trigger: TTTTGTCACAAATGCTGGGAACATCTTGCAGCATAACAAAGCCCAGGAACTGTCAGACCTGCTGAGGTGCAAGGTGGATCCAGACCAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS CCA 72 bp | AGCCCCGCAGACAGGCGCACAGGCAGTTTCCACAGATaGCGCCCGGCGCCGAGAACCCCTAACCCGGCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SPADRRTGSFHR*RPAPRTPNPAS Trigger: GCTCGCCGGGTTAGGGGTTCTCGGCGCCGGGCGCCATCTGTGGAAACTGCCTGTGCGCCTGTCTGCGGGGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS CCA 72 bp | CCCCTTCAATGGCAGGGAAGTCACTCCTCAGGCGCATaGTCTTCGGCCGCCGCTGAAGGTCCACCATGTCCA | + |
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Preference number: 6 (lower is better) Translates to: PLQWQGSHSSGA*SSAAAEGPPCP Trigger: TGGACATGGTGGACCTTCAGCGGCGGCCGAAGACCATGCGCCTGAGGAGTGACTTCCCTGCCATTGAAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS TCA 72 bp | AAGTCACTCCTCAGGCGCATGGTCTTCGGCCGCCGCTaGAGGTCCACCATGTCCAGCTCTGGGAAGGCTAAC | + |
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Preference number: 6 (lower is better) Translates to: KSLLRRMVFGRR*RSTMSSSGKAN Trigger: GTTAGCCTTCCCAGAGCTGGACATGGTGGACCTTCAGCGGCGGCCGAAGACCATGCGCCTGAGGAGTGACTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS CCA 72 bp | AGCGGACTGGCTCCCCAAGAAGGAGGACCCCTTCAATaGCAGGGAAGTCACTCCTCAGGCGCATGGTCTTCG | + |
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Preference number: 6 (lower is better) Translates to: SGLAPQEGGPLQ*QGSHSSGAWSS Trigger: CGAAGACCATGCGCCTGAGGAGTGACTTCCCTGCCATTGAAGGGGTCCTCCTTCTTGGGGAGCCAGTCCGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS CCA 72 bp | CCAGCACTCCATCAATGTCGAACAGTAAGCCAAAGGTaGGAGAACGCTCAGCGCTGCCCGCGATGTAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: PALHQCRTVSQR*ENAQRCPRCSP Trigger: GGGGCTACATCGCGGGCAGCGCTGAGCGTTCTCCCACCTTTGGCTTACTGTTCGACATTGATGGAGTGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS TCA 72 bp | GTACCCTCAGCTGCCCCTGGGAGTTTACCAGCTTGCTaGATGCTTCCAGAGCAGCTGGGATCACTCTGTGGC | + |
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Preference number: 6 (lower is better) Translates to: VPSAAPGSLPAC*MLPEQLGSLCG Trigger: GCCACAGAGTGATCCCAGCTGCTCTGGAAGCATTCAGCAAGCTGGTAAACTCCCAGGGGCAGCTGAGGGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS GCA 72 bp | GCCCCGCCTCTCAGCCTGCTGCCTGATCACGTCCTCTaGATACTGGTAAGTAAGGATGCTGGGTTTGCCCAT | + |
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Preference number: 6 (lower is better) Translates to: APPLSLLPDHVL*ILVSKDAGFAH Trigger: ATGGGCAAACCCAGCATCCTTACTTACCAGTATGCAGAGGACGTGATCAGGCAGCAGGCTGAGAGGCGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS CCA 72 bp | AGGAGCCCTGGACTGAAGCTGAAGTCTCGGTGTCCGTaGAATGGAAGCTCTCTCCTTCCAGGAGGAGGCACT | + |
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Preference number: 6 (lower is better) Translates to: RSPGLKLKSRCP*NGSSLLPGGGT Trigger: AGTGCCTCCTCCTGGAAGGAGAGAGCTTCCATTCCACGGACACCGAGACTTCAGCTTCAGTCCAGGGCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS CAA 90 bp | TCGGTGTCCGTGGAATGGAAGCTCTCTCCTTCCAGGAGGAGGCACTaGGGAGCCTGGGTCCTGAGAACTGTATATGCCAGTGCATACCAG | + |
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Preference number: 6 (lower is better) Translates to: SVSVEWKLSPSRRRH*GAWVLRTVYASAYQ Trigger: CTGGTATGCACTGGCATATACAGTTCTCAGGACCCAGGCTCCCAAGTGCCTCCTCCTGGAAGGAGAGAGCTTCCATTCCACGGACACCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS CCA 72 bp | TGGGGATACGGAGCTGTTGCCAGGCCAGTTCCGGGGTaGCCGTTACTAAGAAGGACATCCATAATCAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: WGYGAVARPVPG*PLLRRTSIISC Trigger: GCAGCTGATTATGGATGTCCTTCTTAGTAACGGCCACCCCGGAACTGGCCTGGCAACAGCTCCGTATCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS CAA 72 bp | ACAGGTACCCTCAGCTGCCCCTGGGAGTTTACCAGCTaGCTGAATGCTTCCAGAGCAGCTGGGATCACTCTG | + |
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Preference number: 6 (lower is better) Translates to: TGTLSCPWEFTS*LNASRAAGITL Trigger: CAGAGTGATCCCAGCTGCTCTGGAAGCATTCAGCAAGCTGGTAAACTCCCAGGGGCAGCTGAGGGTACCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS CAA 72 bp | TGCCAGTGCATACCAGGATGGAAGCACAACTCTGGGTaGCTGAAGGCCGCTGCTTCTGTTGCCCACCAGTCT | + |
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Preference number: 6 (lower is better) Translates to: CQCIPGWKHNSG*LKAAASVAHQS Trigger: AGACTGGTGGGCAACAGAAGCAGCGGCCTTCAGCAACCCAGAGTTGTGCTTCCATCCTGGTATGCACTGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS CAA 90 bp | ACAAAAACCACAGGTACCCTCAGCTGCCCCTGGGAGTTTACCAGCTaGCTGAATGCTTCCAGAGCAGCTGGGATCACTCTGTGGCCTCGA | + |
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Preference number: 6 (lower is better) Translates to: TKTTGTLSCPWEFTS*LNASRAAGITLWPR Trigger: TCGAGGCCACAGAGTGATCCCAGCTGCTCTGGAAGCATTCAGCAAGCTGGTAAACTCCCAGGGGCAGCTGAGGGTACCTGTGGTTTTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS CAA 90 bp | GGTCCACCATGTCCAGCTCTGGGAAGGCTAACCGCAGCTCATCTATaGTCACCACATTCTGGAAGCCTAGTGCTCTGGCGTTCTCCACCA | + |
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Preference number: 6 (lower is better) Translates to: GPPCPALGRLTAAHL*SPHSGSLVLWRSPP Trigger: TGGTGGAGAACGCCAGAGCACTAGGCTTCCAGAATGTGGTGACAATAGATGAGCTGCGGTTAGCCTTCCCAGAGCTGGACATGGTGGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS TCA 72 bp | CTCCTTCCAGGAGGAGGCACTTGGGAGCCTGGGTCCTaGGAACTGTATATGCCAGTGCATACCAGGATGGAA | + |
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Preference number: 6 (lower is better) Translates to: LLPGGGTWEPGS*ELYMPVHTRME Trigger: TTCCATCCTGGTATGCACTGGCATATACAGTTCTCAGGACCCAGGCTCCCAAGTGCCTCCTCCTGGAAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS GCA 72 bp | GGGTGGCCGTTACTAAGAAGGACATCCATAATCAGCTaGAGGTTTGTCTCCCAGCGGACTGGCTCCCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: GWPLLRRTSIIS*RFVSQRTGSPR Trigger: TCTTGGGGAGCCAGTCCGCTGGGAGACAAACCTGCAGCTGATTATGGATGTCCTTCTTAGTAACGGCCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS CCA 72 bp | AAGGCTAACCGCAGCTCATCTATTGTCACCACATTCTaGAAGCCTAGTGCTCTGGCGTTCTCCACCAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: KANRSSSIVTTF*KPSALAFSTRG Trigger: GCCCCTGGTGGAGAACGCCAGAGCACTAGGCTTCCAGAATGTGGTGACAATAGATGAGCTGCGGTTAGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS CCA 72 bp | AAGCTCTCTCCTTCCAGGAGGAGGCACTTGGGAGCCTaGGTCCTGAGAACTGTATATGCCAGTGCATACCAG | + |
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Preference number: 6 (lower is better) Translates to: KLSPSRRRHLGA*VLRTVYASAYQ Trigger: CTGGTATGCACTGGCATATACAGTTCTCAGGACCCAGGCTCCCAAGTGCCTCCTCCTGGAAGGAGAGAGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS CAA 72 bp | GTGGAATGGAAGCTCTCTCCTTCCAGGAGGAGGCACTaGGGAGCCTGGGTCCTGAGAACTGTATATGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: VEWKLSPSRRRH*GAWVLRTVYAS Trigger: ACTGGCATATACAGTTCTCAGGACCCAGGCTCCCAAGTGCCTCCTCCTGGAAGGAGAGAGCTTCCATTCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS TCA 72 bp | ACTGCAGGAAGAGCTTCATGGGGCTGTGAGAGAGAATaGCTTGGTCTGGATCCACCTTGCACCTCAGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: TAGRASWGCERE*LGLDPPCTSAG Trigger: ACCTGCTGAGGTGCAAGGTGGATCCAGACCAAGTCATTCTCTCTCACAGCCCCATGAAGCTCTTCCTGCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS GCA 72 bp | CTTGGGAGCCTGGGTCCTGAGAACTGTATATGCCAGTaGATACCAGGATGGAAGCACAACTCTGGGTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: LGSLGPENCICQ*IPGWKHNSGLL Trigger: CAGCAACCCAGAGTTGTGCTTCCATCCTGGTATGCACTGGCATATACAGTTCTCAGGACCCAGGCTCCCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS CCA 72 bp | TATATGCCAGTGCATACCAGGATGGAAGCACAACTCTaGGTTGCTGAAGGCCGCTGCTTCTGTTGCCCACCA | + |
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Preference number: 6 (lower is better) Translates to: YMPVHTRMEAQL*VAEGRCFCCPP Trigger: TGGTGGGCAACAGAAGCAGCGGCCTTCAGCAACCCAGAGTTGTGCTTCCATCCTGGTATGCACTGGCATATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS CAA 72 bp | TGTCCAGCTCTGGGAAGGCTAACCGCAGCTCATCTATaGTCACCACATTCTGGAAGCCTAGTGCTCTGGCGT | + |
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Preference number: 6 (lower is better) Translates to: CPALGRLTAAHL*SPHSGSLVLWR Trigger: ACGCCAGAGCACTAGGCTTCCAGAATGTGGTGACAATAGATGAGCTGCGGTTAGCCTTCCCAGAGCTGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS CAA 90 bp | AACTGTATATGCCAGTGCATACCAGGATGGAAGCACAACTCTGGGTaGCTGAAGGCCGCTGCTTCTGTTGCCCACCAGTCTGCTGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: NCICQCIPGWKHNSG*LKAAASVAHQSAVP Trigger: AGGAACAGCAGACTGGTGGGCAACAGAAGCAGCGGCCTTCAGCAACCCAGAGTTGTGCTTCCATCCTGGTATGCACTGGCATATACAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS TCA 72 bp | GGGCTTTGTTATGCTGCAAGATGTTCCCAGCATTTGTaGCAAAAACCACAGGTACCCTCAGCTGCCCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: GLCYAARCSQHL*QKPQVPSAAPG Trigger: CCCAGGGGCAGCTGAGGGTACCTGTGGTTTTTGTCACAAATGCTGGGAACATCTTGCAGCATAACAAAGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS GCA 72 bp | CCAGCATTTGTGACAAAAACCACAGGTACCCTCAGCTaGCCCTGGGAGTTTACCAGCTTGCTGAATGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: PAFVTKTTGTLS*PWEFTSLLNAS Trigger: GGAAGCATTCAGCAAGCTGGTAAACTCCCAGGGGCAGCTGAGGGTACCTGTGGTTTTTGTCACAAATGCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS CCA 72 bp | TTGCTGAATGCTTCCAGAGCAGCTGGGATCACTCTGTaGCCTCGAACCAGCACTCCATCAATGTCGAACAGT | + |
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Preference number: 6 (lower is better) Translates to: LLNASRAAGITL*PRTSTPSMSNS Trigger: ACTGTTCGACATTGATGGAGTGCTGGTTCGAGGCCACAGAGTGATCCCAGCTGCTCTGGAAGCATTCAGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS TCA 72 bp | TGGTGGAAAACCAGCTGCACAGCTTCGTTTACATCATaGACAATGTGGGAGGCTTCTAGGAGCCCTGGACTG | + |
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Preference number: 6 (lower is better) Translates to: WWKTSCTASFTS*TMWEASRSPGL Trigger: CAGTCCAGGGCTCCTAGAAGCCTCCCACATTGTTCATGATGTAAACGAAGCTGTGCAGCTGGTTTTCCACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS CCA 72 bp | GGATCCACCTTGCACCTCAGCAGGTCTGACAGTTCCTaGGCTTTGTTATGCTGCAAGATGTTCCCAGCATTT | + |
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Preference number: 6 (lower is better) Translates to: GSTLHLSRSDSS*ALLCCKMFPAF Trigger: AAATGCTGGGAACATCTTGCAGCATAACAAAGCCCAGGAACTGTCAGACCTGCTGAGGTGCAAGGTGGATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS CAA 72 bp | ACCTTGCACCTCAGCAGGTCTGACAGTTCCTGGGCTTaGTTATGCTGCAAGATGTTCCCAGCATTTGTGACA | + |
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Preference number: 6 (lower is better) Translates to: TLHLSRSDSSWA*LCCKMFPAFVT Trigger: TGTCACAAATGCTGGGAACATCTTGCAGCATAACAAAGCCCAGGAACTGTCAGACCTGCTGAGGTGCAAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS CAA 90 bp | TCTGGATCCACCTTGCACCTCAGCAGGTCTGACAGTTCCTGGGCTTaGTTATGCTGCAAGATGTTCCCAGCATTTGTGACAAAAACCACA | + |
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Preference number: 6 (lower is better) Translates to: SGSTLHLSRSDSSWA*LCCKMFPAFVTKTT Trigger: TGTGGTTTTTGTCACAAATGCTGGGAACATCTTGCAGCATAACAAAGCCCAGGAACTGTCAGACCTGCTGAGGTGCAAGGTGGATCCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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| CDS GCA 72 bp | CTCAGCAGGTCTGACAGTTCCTGGGCTTTGTTATGCTaGAAGATGTTCCCAGCATTTGTGACAAAAACCACA | + |
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Preference number: 6 (lower is better) Translates to: LSRSDSSWALLC*KMFPAFVTKTT Trigger: TGTGGTTTTTGTCACAAATGCTGGGAACATCTTGCAGCATAACAAAGCCCAGGAACTGTCAGACCTGCTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075303.7 |
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