Pregenerated sensors for HDHD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025421Ensembl transcript IDs: ENSMUST00000026485.15, ENSMUST00000097521.12, ENSMUST00000097522.11, ENSMUST00000145634.9, ENSMUST00000148955.3, ENSMUST00000150990.9
Found 277 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACCAGAGGAGGGTCACATGGGGAGCAGCACTGCCTGGCAACGGGGTaGAGGCCAGTCCTTTCCTGTGAGCTCAGGTCAGCTTACACAGGT | + |
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Preference number: 1 (lower is better) Translates to: TRGGSHGEQHCLATG*RPVLSCELRSAYTG Trigger: ACCTGTGTAAGCTGACCTGAGCTCACAGGAAAGGACTGGCCTGCACCCCGTTGCCAGGCAGTGCTGCTCCCCATGTGACCCTCCTCTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097521.12 |
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| 3UTR GCA 90 bp | CATGGTTCTCCGGGACACTGGAGCCGGCTGCTGCTCCAGGCTGGATaGCTGGCTGAGGTCTTCCATCTTGTGAGCATGATACACCTGGAC | + |
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Preference number: 1 (lower is better) Translates to: HGSPGHWSRLLLQAG*LAEVFHLVSMIHLD Trigger: GTCCAGGTGTATCATGCTCACAAGATGGAAGACCTCAGCCAGGCATCCAGCCTGGAGCAGCAGCCGGCTCCAGTGTCCCGGAGAACCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| 3UTR CCA 90 bp | AGAGCAGGAAGCGGACATAGTGACAGAAACCAGAGGAGGGTCACATaGGGAGCAGCACTGCCTGGCAACGGGGTGCAGGCCAGTCCTTTC | + |
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Preference number: 1 (lower is better) Translates to: RAGSGHSDRNQRRVT*GAALPGNGVQASPF Trigger: GAAAGGACTGGCCTGCACCCCGTTGCCAGGCAGTGCTGCTCCCCATGTGACCCTCCTCTGGTTTCTGTCACTATGTCCGCTTCCTGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097521.12 |
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| 3UTR TCA 90 bp | TCCGGGACACTGGAGCCGGCTGCTGCTCCAGGCTGGATGCCTGGCTaGGGTCTTCCATCTTGTGAGCATGATACACCTGGACCATTTCCA | + |
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Preference number: 1 (lower is better) Translates to: SGTLEPAAAPGWMPG*GLPSCEHDTPGPFP Trigger: TGGAAATGGTCCAGGTGTATCATGCTCACAAGATGGAAGACCTCAGCCAGGCATCCAGCCTGGAGCAGCAGCCGGCTCCAGTGTCCCGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| 3UTR CCA 90 bp | CCGCCTCGTTCCATCCTGCAGGTGGGGAAGTCAGCAGAGAGGACGTaGACTCCAGTCTTCCTAGTGATCTTCAGCAGTGTCCCTCAGCTC | + |
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Preference number: 1 (lower is better) Translates to: PPRSILQVGKSAERT*TPVFLVIFSSVPQL Trigger: GAGCTGAGGGACACTGCTGAAGATCACTAGGAAGACTGGAGTCCACGTCCTCTCTGCTGACTTCCCCACCTGCAGGATGGAACGAGGCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| 3UTR GCA 90 bp | ATCCTCTCACTTCCACCACGGAGGAGTGGAGAGCTACTGCTCCTCTaGGCCCACAGGAGCTTCTCCTCCAGCCCAGTGAACCTGATGAAT | + |
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Preference number: 1 (lower is better) Translates to: ILSLPPRRSGELLLL*AHRSFSSSPVNLMN Trigger: ATTCATCAGGTTCACTGGGCTGGAGGAGAAGCTCCTGTGGGCGCAGAGGAGCAGTAGCTCTCCACTCCTCCGTGGTGGAAGTGAGAGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| 3UTR GCA 90 bp | GCTCTGACAGATGTGGTATGGCAGGCAGGTAGAGCTGCACCCACCTaGAGCTGTGTGTGTGGTGTGATGGAAGCACATCTGGCCACCAAG | + |
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Preference number: 1 (lower is better) Translates to: ALTDVVWQAGRAAPT*SCVCGVMEAHLATK Trigger: CTTGGTGGCCAGATGTGCTTCCATCACACCACACACACAGCTGCAGGTGGGTGCAGCTCTACCTGCCTGCCATACCACATCTGTCAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
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| 3UTR TCA 90 bp | GGCAGGCAGGTAGAGCTGCACCCACCTGCAGCTGTGTGTGTGGTGTaGTGGAAGCACATCTGGCCACCAAGAGGTTGGCTCTACATTCTA | + |
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Preference number: 1 (lower is better) Translates to: GRQVELHPPAAVCVV*WKHIWPPRGWLYIL Trigger: TAGAATGTAGAGCCAACCTCTTGGTGGCCAGATGTGCTTCCATCACACCACACACACAGCTGCAGGTGGGTGCAGCTCTACCTGCCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
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| 3UTR CCA 90 bp | GAAACAGCAGCGGCTGAGTCGCACCTGAACATCGCTCTCAAACTCTaGCAACTAGGGCTGGTGACCCCTTGCTCCTGTATCATCTGCATC | + |
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Preference number: 1 (lower is better) Translates to: ETAAAESHLNIALKL*QLGLVTPCSCIICI Trigger: GATGCAGATGATACAGGAGCAAGGGGTCACCAGCCCTAGTTGCCAGAGTTTGAGAGCGATGTTCAGGTGCGACTCAGCCGCTGCTGTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
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| 3UTR TCA 90 bp | GCACAGCAGTGCGTATGCAGCAGCTTCAGAGGACCTGGTAATTCCTaGGCAATCAACAACGAACCCTGGCTCCCAAATCCCAGACCGCAT | + |
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Preference number: 1 (lower is better) Translates to: AQQCVCSSFRGPGNS*AINNEPWLPNPRPH Trigger: ATGCGGTCTGGGATTTGGGAGCCAGGGTTCGTTGTTGATTGCTCAGGAATTACCAGGTCCTCTGAAGCTGCTGCATACGCACTGCTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| 3UTR TCA 90 bp | ATCTGCTGCCTCTTAGACAGACATGTGCGTCTGGCTAGTAGGTCTTaGTGGCTGGTATGGCAAAGCCAGCAAGGCCCTCATGAGCGTATG | + |
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Preference number: 1 (lower is better) Translates to: ICCLLDRHVRLASRS*WLVWQSQQGPHERM Trigger: CATACGCTCATGAGGGCCTTGCTGGCTTTGCCATACCAGCCATCAAGACCTACTAGCCAGACGCACATGTCTGTCTAAGAGGCAGCAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
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| 3UTR GCA 90 bp | AAGAGCCCCGTAAAACAACTGCCACGGCCGAGGATTGGCACAGCATaGAAATGCAGCAGGAAAGCCATTCCCTACTTCATCTCCTTCATC | + |
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Preference number: 1 (lower is better) Translates to: KSPVKQLPRPRIGTA*KCSRKAIPYFISFI Trigger: GATGAAGGAGATGAAGTAGGGAATGGCTTTCCTGCTGCATTTGCATGCTGTGCCAATCCTCGGCCGTGGCAGTTGTTTTACGGGGCTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| 3UTR TCA 90 bp | GTATTTAGTTCCTACATTCCATGTTCAATACTGCACAGAAGGGGGTaGGGTGAGTTACGTGCTCTCAGTCAGAGCACCGGGCACCTGCCA | + |
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Preference number: 1 (lower is better) Translates to: VFSSYIPCSILHRRG*GELRALSQSTGHLP Trigger: TGGCAGGTGCCCGGTGCTCTGACTGAGAGCACGTAACTCACCTCACCCCCTTCTGTGCAGTATTGAACATGGAATGTAGGAACTAAATAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| 3UTR CCA 90 bp | TACAGTGGAAGATCTGGCTTTCCACATCTGTTAAAGCAACTTCACTaGATCTCAGCTGAAGGGCTCGCCACACTGCTGCTAGCTTGCTTC | + |
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Preference number: 1 (lower is better) Translates to: YSGRSGFPHLLKQLH*ISAEGLATLLLACF Trigger: GAAGCAAGCTAGCAGCAGTGTGGCGAGCCCTTCAGCTGAGATCCAGTGAAGTTGCTTTAACAGATGTGGAAAGCCAGATCTTCCACTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| 3UTR TCA 90 bp | AGGCCAGTCCTTTCCTGTGAGCTCAGGTCAGCTTACACAGGTGCCTaGAATCTTCTGGGTTGTATTTCTATGTTTCTCATGCCCAAGGCT | + |
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Preference number: 1 (lower is better) Translates to: RPVLSCELRSAYTGA*NLLGCISMFLMPKA Trigger: AGCCTTGGGCATGAGAAACATAGAAATACAACCCAGAAGATTTCAGGCACCTGTGTAAGCTGACCTGAGCTCACAGGAAAGGACTGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097521.12 |
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| 3UTR CCA 90 bp | TTTGTTCATCTGGTTGACCACACTCACCTCCGTCAAAACCATTCCTaGTTGTCTTTATCACTTCCCAGCCACTCATACTGTCTGAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: FVHLVDHTHLRQNHS*LSLSLPSHSYCLRQ Trigger: CTGCCTCAGACAGTATGAGTGGCTGGGAAGTGATAAAGACAACCAGGAATGGTTTTGACGGAGGTGAGTGTGGTCAACCAGATGAACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
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| 3UTR CCA 90 bp | AGAAAAGAAACTAAGACAGCTGACAAAGGAAGCTCCAAAGACACTTaGATCACATTTCCTCCAGGTGGTCAAGATGACCAGCCAGCTGAG | + |
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Preference number: 1 (lower is better) Translates to: RKETKTADKGSSKDT*ITFPPGGQDDQPAE Trigger: CTCAGCTGGCTGGTCATCTTGACCACCTGGAGGAAATGTGATCCAAGTGTCTTTGGAGCTTCCTTTGTCAGCTGTCTTAGTTTCTTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
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| 3UTR TCA 90 bp | CAAAGCCAGCAAGGCCCTCATGAGCGTATGTGGAAAAGGCCTTTGTaGTTTATGACAGCTAAACATGATAATGTAAGCATGGCTCCATGC | + |
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Preference number: 1 (lower is better) Translates to: QSQQGPHERMWKRPL*FMTAKHDNVSMAPC Trigger: GCATGGAGCCATGCTTACATTATCATGTTTAGCTGTCATAAATCACAAAGGCCTTTTCCACATACGCTCATGAGGGCCTTGCTGGCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
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| 3UTR GCA 90 bp | CCTAAATCCACACCCATGAGAATAATGTGCATGTCCCCACAGACATaGAGAAGAGTGTTCATCACAGCAGCAAGACTGGAAACAAAGCAA | + |
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Preference number: 1 (lower is better) Translates to: PKSTPMRIMCMSPQT*RRVFITAARLETKQ Trigger: TTGCTTTGTTTCCAGTCTTGCTGCTGTGATGAACACTCTTCTGCATGTCTGTGGGGACATGCACATTATTCTCATGGGTGTGGATTTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097521.12 |
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| 3UTR TCA 90 bp | AAAGCCATTCCCTACTTCATCTCCTTCATCTGGGTGGGTATAACATaGGAAGAATCATCCAGGCACCGAGACGAGATCTCATTTTACAAC | + |
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Preference number: 1 (lower is better) Translates to: KAIPYFISFIWVGIT*EESSRHRDEISFYN Trigger: GTTGTAAAATGAGATCTCGTCTCGGTGCCTGGATGATTCTTCTCATGTTATACCCACCCAGATGAAGGAGATGAAGTAGGGAATGGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| 3UTR TCA 90 bp | AGACACCATTTCCCTAGCTTTGTTCCCTTCCATCTAAGACGGAGCTaGGCTCTAAACAAGCATCAAAGCCTGAAGCTCATTAACATCAGT | + |
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Preference number: 1 (lower is better) Translates to: RHHFPSFVPFHLRRS*ALNKHQSLKLINIS Trigger: ACTGATGTTAATGAGCTTCAGGCTTTGATGCTTGTTTAGAGCTCAGCTCCGTCTTAGATGGAAGGGAACAAAGCTAGGGAAATGGTGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| 3UTR GCA 90 bp | GTGCTAGGTAGGAGTCATTTGTGTGGCGCCACGCTTACATTATTGTaGTTACTTGTCATAAATCCCAAAGGCCTTTCCTCACATAAATTC | + |
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Preference number: 1 (lower is better) Translates to: VLGRSHLCGATLTLL*LLVINPKGLSSHKF Trigger: GAATTTATGTGAGGAAAGGCCTTTGGGATTTATGACAAGTAAGCACAATAATGTAAGCGTGGCGCCACACAAATGACTCCTACCTAGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
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| 3UTR-3UTR TCA 90 bp | GATTGCCATGGTTCTCCGGGACACTGGAGCCGGCTGCTGCTCCAGGCTGGATGCCTGCACAGAAGGGGGTaGGGTGAGTTACGTGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: DCHGSPGHWSRLLLQAGCLHRRG*GELRAL Trigger: GAGAGCACGTAACTCACCTCACCCCCTTCTGTGCAG...GCATCCAGCCTGGAGCAGCAGCCGGCTCCAGTGTCCCGGAGAACCATGGCAATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| 3UTR-3UTR GCA 90 bp | ACAAAGCAAGAGCCAGGATCAGCACACAAAGAGGCCCGGGAAACTCGTCCAACACATGGGGAGCAGCACTaGCTGGCAACGGGGTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: TKQEPGSAHKEARETRPTHGEQH*LATGCR Trigger: CCTGCACCCCGTTGCCAGGCAGTGCTGCTCCCCATG...TGTTGGACGAGTTTCCCGGGCCTCTTTGTGTGCTGATCCTGGCTCTTGCTTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097521.12 |
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| 3UTR-3UTR CCA 90 bp | CGCCACACTGCTGCTAGCTTGCTTCTCTGTGGCTTGTCTGCAGAGCTTCACGGCTCCACCACGGAGGAGTaGAGAGCTACTGCTCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: RHTAASLLLCGLSAELHGSTTEE*RATAPL Trigger: CAGAGGAGCAGTAGCTCTCCACTCCTCCGTGGTGGA...GCCGTGAAGCTCTGCAGACAAGCCACAGAGAAGCAAGCTAGCAGCAGTGTGGCG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| 3UTR-3UTR GCA 90 bp | ATACCTCTAACTAAGATTGCCATGGTTCTCCGGGACACTGGAGCCGGCTGCTGCGAGCTACTGCTCCTCTaGGCCCACAGGAGCTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: IPLTKIAMVLRDTGAGCCELLLL*AHRSFS Trigger: GGAGAAGCTCCTGTGGGCGCAGAGGAGCAGTAGCTC...GCAGCAGCCGGCTCCAGTGTCCCGGAGAACCATGGCAATCTTAGTTAGAGGTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| 3UTR-3UTR GCA 90 bp | ATACCTCTAACTAAGATTGCCATGGTTCTCCGGGACACTGGAGCCGGCTGCTGCCGCCTCGTTCCATCCTaGAGGTGGGGAAGTCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: IPLTKIAMVLRDTGAGCCRLVPS*RWGSQQ Trigger: CTGCTGACTTCCCCACCTGCAGGATGGAACGAGGCG...GCAGCAGCCGGCTCCAGTGTCCCGGAGAACCATGGCAATCTTAGTTAGAGGTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| 3UTR-3UTR CCA 90 bp | ATACCTCTAACTAAGATTGCCATGGTTCTCCGGGACACTGGAGCCGGCTGCTGCGCCACGGCCGAGGATTaGCACAGCATGCAAATGCAG | + |
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Preference number: 2 (lower is better) Translates to: IPLTKIAMVLRDTGAGCCATAED*HSMQMQ Trigger: CTGCATTTGCATGCTGTGCCAATCCTCGGCCGTGGC...GCAGCAGCCGGCTCCAGTGTCCCGGAGAACCATGGCAATCTTAGTTAGAGGTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| 3UTR-3UTR TCA 90 bp | GCTCTCAGTCAGAGCACCGGGCACCTGCCAGTGTGTGAGTACGAAGTTAGGGCACAGTGCATCTCTGTGTaGGTCAGTCATGCTCACAGA | + |
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Preference number: 2 (lower is better) Translates to: ALSQSTGHLPVCEYEVRAQCISV*VSHAHR Trigger: TCTGTGAGCATGACTGACTCACACAGAGATGCACTG...TGCCCTAACTTCGTACTCACACACTGGCAGGTGCCCGGTGCTCTGACTGAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| 3UTR-3UTR CCA 90 bp | GCTCTCAGTCAGAGCACCGGGCACCTGCCAGTGTGTGAGTACGAAGTTAGGGCAGCGCTGGGAATACAGTaGAAGATCTGGCTTTCCACA | + |
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Preference number: 2 (lower is better) Translates to: ALSQSTGHLPVCEYEVRAALGIQ*KIWLST Trigger: TGTGGAAAGCCAGATCTTCCACTGTATTCCCAGCGC...TGCCCTAACTTCGTACTCACACACTGGCAGGTGCCCGGTGCTCTGACTGAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| 3UTR-3UTR TCA 90 bp | AAGGAAATACCTCTAACTAAGATTGCCATGGTTCTCCGGGACACTGGAGCCGGCTCACTGGATCTCAGCTaGAGGGCTCGCCACACTGCT | + |
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Preference number: 2 (lower is better) Translates to: KEIPLTKIAMVLRDTGAGSLDLS*RARHTA Trigger: AGCAGTGTGGCGAGCCCTTCAGCTGAGATCCAGTGA...GCCGGCTCCAGTGTCCCGGAGAACCATGGCAATCTTAGTTAGAGGTATTTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| 3UTR-3UTR TCA 90 bp | AAGGAAATACCTCTAACTAAGATTGCCATGGTTCTCCGGGACACTGGAGCCGGCCTGCACAGAAGGGGGTaGGGTGAGTTACGTGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: KEIPLTKIAMVLRDTGAGLHRRG*GELRAL Trigger: GAGAGCACGTAACTCACCTCACCCCCTTCTGTGCAG...GCCGGCTCCAGTGTCCCGGAGAACCATGGCAATCTTAGTTAGAGGTATTTCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| 3UTR-3UTR GCA 90 bp | GTGATGGAAGCACATCTGGCCACCAAGAGGTTGGCTCTACATTCTACAACAGTGCAGGCAGTGAGAATGTaGACTCCCCAGTGGGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: VMEAHLATKRLALHSTTVQAVRM*TPQWGW Trigger: CCACCCCCACTGGGGAGTGCACATTCTCACTGCCTG...CACTGTTGTAGAATGTAGAGCCAACCTCTTGGTGGCCAGATGTGCTTCCATCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
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| 3UTR-3UTR CCA 90 bp | TGCACAGAAGGGGGTGAGGTGAGTTACGTGCTCTCAGTCAGAGCACCGGGCACCTTAAAGCAACTTCACTaGATCTCAGCTGAAGGGCTC | + |
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Preference number: 2 (lower is better) Translates to: CTEGGEVSYVLSVRAPGTLKQLH*ISAEGL Trigger: GAGCCCTTCAGCTGAGATCCAGTGAAGTTGCTTTAA...GGTGCCCGGTGCTCTGACTGAGAGCACGTAACTCACCTCACCCCCTTCTGTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| 3UTR-3UTR CCA 90 bp | GATTGCCATGGTTCTCCGGGACACTGGAGCCGGCTGCTGCTCCAGGCTGGATGCTCCTGTGAGGTTTTCTaGGCTAAGTCCTTAGTATTT | + |
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Preference number: 2 (lower is better) Translates to: DCHGSPGHWSRLLLQAGCSCEVF*AKSLVF Trigger: AAATACTAAGGACTTAGCCCAGAAAACCTCACAGGA...GCATCCAGCCTGGAGCAGCAGCCGGCTCCAGTGTCCCGGAGAACCATGGCAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| 3UTR-3UTR TCA 90 bp | GTGATGGAAGCACATCTGGCCACCAAGAGGTTGGCTCTACATTCTACAACAGTGAGAAGCCTCCCGCAATaGGCAGAGCTGCACAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: VMEAHLATKRLALHSTTVRSLPQ*AELHSS Trigger: ACTGCTGTGCAGCTCTGCTCATTGCGGGAGGCTTCT...CACTGTTGTAGAATGTAGAGCCAACCTCTTGGTGGCCAGATGTGCTTCCATCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
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| 3UTR-3UTR CCA 90 bp | ACTCCTAAATCCACACCCATGAGAATAATGTGCATGTCCCCACAGACATGCAGACAGAGGAGGGTCACATaGGGAGCAGCACTGCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: TPKSTPMRIMCMSPQTCRQRRVT*GAALPG Trigger: GCCAGGCAGTGCTGCTCCCCATGTGACCCTCCTCTG...TCTGCATGTCTGTGGGGACATGCACATTATTCTCATGGGTGTGGATTTAGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097521.12 |
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| 3UTR-3UTR CCA 90 bp | AAGGAAATACCTCTAACTAAGATTGCCATGGTTCTCCGGGACACTGGAGCCGGCGTTCCATCCTGCAGGTaGGGAAGTCAGCAGAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: KEIPLTKIAMVLRDTGAGVPSCR*GSQQRG Trigger: TCCTCTCTGCTGACTTCCCCACCTGCAGGATGGAAC...GCCGGCTCCAGTGTCCCGGAGAACCATGGCAATCTTAGTTAGAGGTATTTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| 3UTR-3UTR CCA 90 bp | ACTCACCTCCGTCAAAACCATTCCTGGTTGTCTTTATCACTTCCCAGCCACTCAACTCCCCAGTGGGGGTaGACAGCTGTTTCATGCGCC | + |
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Preference number: 2 (lower is better) Translates to: THLRQNHSWLSLSLPSHSTPQWG*TAVSCA Trigger: GGCGCATGAAACAGCTGTCCACCCCCACTGGGGAGT...TGAGTGGCTGGGAAGTGATAAAGACAACCAGGAATGGTTTTGACGGAGGTGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
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| 3UTR-3UTR TCA 90 bp | CTGTTAAAGCAACTTCACTGGATCTCAGCTGAAGGGCTCGCCACACTGCTGCTACAGTGCATCTCTGTGTaGGTCAGTCATGCTCACAGA | + |
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Preference number: 2 (lower is better) Translates to: LLKQLHWISAEGLATLLLQCISV*VSHAHR Trigger: TCTGTGAGCATGACTGACTCACACAGAGATGCACTG...TAGCAGCAGTGTGGCGAGCCCTTCAGCTGAGATCCAGTGAAGTTGCTTTAACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| 3UTR-3UTR GCA 90 bp | TTGCAGGTGCCTAAGGACTTTAATTTCATGTTACTGGAGCCATTGATCCAACGCGAGCTACTGCTCCTCTaGGCCCACAGGAGCTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: LQVPKDFNFMLLEPLIQRELLLL*AHRSFS Trigger: GGAGAAGCTCCTGTGGGCGCAGAGGAGCAGTAGCTC...GCGTTGGATCAATGGCTCCAGTAACATGAAATTAAAGTCCTTAGGCACCTGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
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| 3UTR-3UTR GCA 90 bp | AAAAAGTCATCTGCGCTGGGAATACAGTGGAAGATCTGGCTTTCCACATCTGTTGAGCTACTGCTCCTCTaGGCCCACAGGAGCTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: KKSSALGIQWKIWLSTSVELLLL*AHRSFS Trigger: GGAGAAGCTCCTGTGGGCGCAGAGGAGCAGTAGCTC...AACAGATGTGGAAAGCCAGATCTTCCACTGTATTCCCAGCGCAGATGACTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| 3UTR-3UTR TCA 90 bp | TCCGTAAAGCCAAGAACAGAGCACTCACTAAGACACCATTTCCCTAGCTTTGTTTCACTGGATCTCAGCTaGAGGGCTCGCCACACTGCT | + |
|
Preference number: 2 (lower is better) Translates to: SVKPRTEHSLRHHFPSFVSLDLS*RARHTA Trigger: AGCAGTGTGGCGAGCCCTTCAGCTGAGATCCAGTGA...AACAAAGCTAGGGAAATGGTGTCTTAGTGAGTGCTCTGTTCTTGGCTTTACGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR-3UTR TCA 90 bp | TGCAGGAGTAGGTTCTCTTCTTCCACATGGGCTCCAGAGACGGTACTCAGGCCATATCTGGCATCTCGCTaGCCCTTTTTGGACTTTAAT | + |
|
Preference number: 2 (lower is better) Translates to: CRSRFSSSTWAPETVLRPYLASR*PFLDFN Trigger: ATTAAAGTCCAAAAAGGGTCAGCGAGATGCCAGATA...TGGCCTGAGTACCGTCTCTGGAGCCCATGTGGAAGAAGAGAACCTACTCCTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097521.12 |
||
| 3UTR-3UTR TCA 90 bp | ACTCCTAAATCCACACCCATGAGAATAATGTGCATGTCCCCACAGACATGCAGAGCCAGTCCTTTCCTGTaGGCTCAGGTCAGCTTACAC | + |
|
Preference number: 2 (lower is better) Translates to: TPKSTPMRIMCMSPQTCRASPFL*AQVSLH Trigger: GTGTAAGCTGACCTGAGCTCACAGGAAAGGACTGGC...TCTGCATGTCTGTGGGGACATGCACATTATTCTCATGGGTGTGGATTTAGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097521.12 |
||
| 3UTR-3UTR TCA 90 bp | TCTACAACAGTGTTCACTGCTTCCGATACCCATCATTTCCCATTGCGCCCACTGAGATGTGGGACCTCTTaGGGGCACTGTTATAGTACC | + |
|
Preference number: 2 (lower is better) Translates to: STTVFTASDTHHFPLRPLRCGTS*GHCYST Trigger: GGTACTATAACAGTGCCCTCAAGAGGTCCCACATCT...CAGTGGGCGCAATGGGAAATGATGGGTATCGGAAGCAGTGAACACTGTTGTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR-3UTR GCA 90 bp | TACAGTGGAAGATCTGGCTTTCCACATCTGTTAAAGCAACTTCACTGGATCTCAGAGCTACTGCTCCTCTaGGCCCACAGGAGCTTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: YSGRSGFPHLLKQLHWISELLLL*AHRSFS Trigger: GGAGAAGCTCCTGTGGGCGCAGAGGAGCAGTAGCTC...TGAGATCCAGTGAAGTTGCTTTAACAGATGTGGAAAGCCAGATCTTCCACTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR-3UTR GCA 90 bp | ATACAGTGGAAGATCTGGCTTTCCACATCTGTTAAAGCAACTTCACTGGATCTCGGAGTGGAGAGCTACTaGTCCTCTGCGCCCACAGGA | + |
|
Preference number: 2 (lower is better) Translates to: IQWKIWLSTSVKATSLDLGVESY*SSAPTG Trigger: TCCTGTGGGCGCAGAGGAGCAGTAGCTCTCCACTCC...GAGATCCAGTGAAGTTGCTTTAACAGATGTGGAAAGCCAGATCTTCCACTGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR-3UTR GCA 90 bp | CTCCATGCAAATGACTGTAGTAAGAAAAAGGGATTCACCCTCCCACTCATGCTGCGCAATGAGCAGAGCTaGACAGCAGTGCGTATGCAG | + |
|
Preference number: 2 (lower is better) Translates to: LHANDCSKKKGFTLPLMLRNEQS*TAVRMQ Trigger: CTGCATACGCACTGCTGTGCAGCTCTGCTCATTGCG...CAGCATGAGTGGGAGGGTGAATCCCTTTTTCTTACTACAGTCATTTGCATGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR-3UTR CCA 90 bp | AAAAAGTCATCTGCGCTGGGAATACAGTGGAAGATCTGGCTTTCCACATCTGTTTCCACCACGGAGGAGTaGAGAGCTACTGCTCCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: KKSSALGIQWKIWLSTSVSTTEE*RATAPL Trigger: CAGAGGAGCAGTAGCTCTCCACTCCTCCGTGGTGGA...AACAGATGTGGAAAGCCAGATCTTCCACTGTATTCCCAGCGCAGATGACTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR-3UTR TCA 90 bp | GTGTTGACTTATTTTAGAGTTCACAACTCAAATGCGCGTGGTAGCGCAGAAACTAAAGGCCCCAGGCAGTaGGAATGTGCACTCCCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: VLTYFRVHNSNARGSAETKGPRQ*ECALPS Trigger: ACTGGGGAGTGCACATTCTCACTGCCTGGGGCCTTT...AGTTTCTGCGCTACCACGCGCATTTGAGTTGTGAACTCTAAAATAAGTCAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR-3UTR GCA 90 bp | CATTCTACAACAGTGTTCACTGCTTCCGATACCCATCATTTCCCATTGCGCCCAACACTGCTGCTAGCTTaGTTCTCTGTGGCTTGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: HSTTVFTASDTHHFPLRPTLLLA*FSVACL Trigger: CAGACAAGCCACAGAGAAGCAAGCTAGCAGCAGTGT...TGGGCGCAATGGGAAATGATGGGTATCGGAAGCAGTGAACACTGTTGTAGAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR-3UTR GCA 90 bp | AGCAGAGCTGCACAGCAGTGCGTATGCAGCAGCTTCAGAGGACCTGGTAATTCCATGAAATCTTGCAAATaGACAGTTAATAGGTCCCCG | + |
|
Preference number: 2 (lower is better) Translates to: SRAAQQCVCSSFRGPGNSMKSCK*TVNRSP Trigger: CGGGGACCTATTAACTGTGCATTTGCAAGATTTCAT...GGAATTACCAGGTCCTCTGAAGCTGCTGCATACGCACTGCTGTGCAGCTCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR-3UTR CCA 90 bp | ATACAGTGGAAGATCTGGCTTTCCACATCTGTTAAAGCAACTTCACTGGATCTCTCCACCACGGAGGAGTaGAGAGCTACTGCTCCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: IQWKIWLSTSVKATSLDLSTTEE*RATAPL Trigger: CAGAGGAGCAGTAGCTCTCCACTCCTCCGTGGTGGA...GAGATCCAGTGAAGTTGCTTTAACAGATGTGGAAAGCCAGATCTTCCACTGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR-3UTR CCA 90 bp | GATGATGCACGATTCTATCCTAATAATTCAGTGCCCAAGAGCCCCGTAAAACAAGCCACGGCCGAGGATTaGCACAGCATGCAAATGCAG | + |
|
Preference number: 2 (lower is better) Translates to: DDARFYPNNSVPKSPVKQATAED*HSMQMQ Trigger: CTGCATTTGCATGCTGTGCCAATCCTCGGCCGTGGC...TTGTTTTACGGGGCTCTTGGGCACTGAATTATTAGGATAGAATCGTGCATCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR CAA 90 bp | CATTCTACAACAGTGTTCACTGCTTCCGATACCCATCATTTCCCATaGCGCCCACTGGCCTTCCTTCTCCCAAAGTCTTTAGTGCCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: HSTTVFTASDTHHFP*RPLAFLLPKSLVPF Trigger: AAAAGGCACTAAAGACTTTGGGAGAAGGAAGGCCAGTGGGCGCAATGGGAAATGATGGGTATCGGAAGCAGTGAACACTGTTGTAGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR-3UTR TCA 90 bp | AGCTCAGGTCAGCTTACACAGGTGCCTGAAATCTTCTGGGTTGTATTTCTATGTAGTAGCACAGTGCTGTaGAATGTCTCCTGCCCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: SSGQLTQVPEIFWVVFLCSSTVL*NVSCPG Trigger: ACCTGGGCAGGAGACATTTCACAGCACTGTGCTACT...ACATAGAAATACAACCCAGAAGATTTCAGGCACCTGTGTAAGCTGACCTGAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097521.12 |
||
| 3UTR-3UTR GCA 90 bp | GAGGTTGGCTCTACATTCTACAACAGTGTTCACTGCTTCCGATACCCATCATTTTCTCTGTGGCTTGTCTaGAGAGCTTCACGGCTCAAC | + |
|
Preference number: 2 (lower is better) Translates to: EVGSTFYNSVHCFRYPSFSLWLV*RASRLN Trigger: GTTGAGCCGTGAAGCTCTGCAGACAAGCCACAGAGA...AAATGATGGGTATCGGAAGCAGTGAACACTGTTGTAGAATGTAGAGCCAACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR-3UTR GCA 90 bp | AAAAAGTCATCTGCGCTGGGAATACAGTGGAAGATCTGGCTTTCCACATCTGTTTCTCTGTGGCTTGTCTaGAGAGCTTCACGGCTCAAC | + |
|
Preference number: 2 (lower is better) Translates to: KKSSALGIQWKIWLSTSVSLWLV*RASRLN Trigger: GTTGAGCCGTGAAGCTCTGCAGACAAGCCACAGAGA...AACAGATGTGGAAAGCCAGATCTTCCACTGTATTCCCAGCGCAGATGACTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR-3UTR GCA 90 bp | AAACAAAGCAAGAGCCAGGATCAGCACACAAAGAGGCCCGGGAAACTCGTCCAAGACTTTAATCAGGACTaGATAGCTGACAGCCATTTC | + |
|
Preference number: 2 (lower is better) Translates to: KQSKSQDQHTKRPGKLVQDFNQD*IADSHF Trigger: GAAATGGCTGTCAGCTATGCAGTCCTGATTAAAGTC...TTGGACGAGTTTCCCGGGCCTCTTTGTGTGCTGATCCTGGCTCTTGCTTTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097521.12 |
||
| 3UTR-3UTR GCA 90 bp | AAATACAGGGATGTTTCCACCTTCCCCACCCTACAGGATACTGGAGTTTTAAAGGGCACAGCATGCAAATaGAGCAGGAAAGCCATTCCC | + |
|
Preference number: 2 (lower is better) Translates to: KYRDVSTFPTLQDTGVLKGTACK*SRKAIP Trigger: GGGAATGGCTTTCCTGCTGCATTTGCATGCTGTGCC...CTTTAAAACTCCAGTATCCTGTAGGGTGGGGAAGGTGGAAACATCCCTGTATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR-3UTR TCA 90 bp | CTGGGAATACAGTGGAAGATCTGGCTTTCCACATCTGTTAAAGCAACTTCACTGCAGTGCATCTCTGTGTaGGTCAGTCATGCTCACAGA | + |
|
Preference number: 2 (lower is better) Translates to: LGIQWKIWLSTSVKATSLQCISV*VSHAHR Trigger: TCTGTGAGCATGACTGACTCACACAGAGATGCACTG...CAGTGAAGTTGCTTTAACAGATGTGGAAAGCCAGATCTTCCACTGTATTCCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR-3UTR TCA 90 bp | CTCCATGCAAATGACTGTAGTAAGAAAAAGGGATTCACCCTCCCACTCATGCTGCTTGATCTTGTCCAGTaGAGAGATGTGGGACCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: LHANDCSKKKGFTLPLMLLDLVQ*RDVGPL Trigger: AAGAGGTCCCACATCTCTTCACTGGACAAGATCAAG...CAGCATGAGTGGGAGGGTGAATCCCTTTTTCTTACTACAGTCATTTGCATGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR-3UTR TCA 90 bp | CATTCTACAACAGTGTTCACTGCTTCCGATACCCATCATTTCCCATTGCGCCCATCTAAGATAAACTTCTaGGTTATCCTCCTGGGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: HSTTVFTASDTHHFPLRPSKINF*VILLGL Trigger: GAGGCCCAGGAGGATAACTCAGAAGTTTATCTTAGA...TGGGCGCAATGGGAAATGATGGGTATCGGAAGCAGTGAACACTGTTGTAGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
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| 3UTR-3UTR GCA 90 bp | TACAGTGGAAGATCTGGCTTTCCACATCTGTTAAAGCAACTTCACTGGATCTCATCTCTGTGGCTTGTCTaGAGAGCTTCACGGCTCAAC | + |
|
Preference number: 2 (lower is better) Translates to: YSGRSGFPHLLKQLHWISSLWLV*RASRLN Trigger: GTTGAGCCGTGAAGCTCTGCAGACAAGCCACAGAGA...TGAGATCCAGTGAAGTTGCTTTAACAGATGTGGAAAGCCAGATCTTCCACTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR-3UTR CCA 90 bp | ATAAACTCATTAAGAAGCTACCATGGAGACCACATGGACAGCCACAGTTCCACAACTGCCTGTCATGCATaGGTGTCTCAAAGCAGCAAC | + |
|
Preference number: 2 (lower is better) Translates to: INSLRSYHGDHMDSHSSTTACHA*VSQSSN Trigger: GTTGCTGCTTTGAGACACCCATGCATGACAGGCAGT...TGTGGAACTGTGGCTGTCCATGTGGTCTCCATGGTAGCTTCTTAATGAGTTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097521.12 |
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| 3UTR-3UTR CCA 90 bp | AGAGTGTTCATCACAGCAGCAAGACTGGAAACAAAGCAAGAGCCAGGATCAGCACCTTTATCCTTTATCTaGCATCTCGCTGACCCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: RVFITAARLETKQEPGSAPLSFI*HLADPF Trigger: AAAAGGGTCAGCGAGATGCCAGATAAAGGATAAAGG...TGCTGATCCTGGCTCTTGCTTTGTTTCCAGTCTTGCTGCTGTGATGAACACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097521.12 |
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| 3UTR CAA 90 bp | AGGGTGCTAGGTAGGAGTCATTTGTGTGGCGCCACGCTTACATTATaGTGCTTACTTGTCATAAATCCCAAAGGCCTTTCCTCACATAAA | + |
|
Preference number: 2 (lower is better) Translates to: RVLGRSHLCGATLTL*CLLVINPKGLSSHK Trigger: TTTATGTGAGGAAAGGCCTTTGGGATTTATGACAAGTAAGCACAATAATGTAAGCGTGGCGCCACACAAATGACTCCTACCTAGCACCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR-3UTR TCA 90 bp | GAGGTTGGCTCTACATTCTACAACAGTGTTCACTGCTTCCGATACCCATCATTTATCTGTGACAGAAACTaGAATGTCTCCTCTCCTAGC | + |
|
Preference number: 2 (lower is better) Translates to: EVGSTFYNSVHCFRYPSFICDRN*NVSSPS Trigger: GCTAGGAGAGGAGACATTTCAGTTTCTGTCACAGAT...AAATGATGGGTATCGGAAGCAGTGAACACTGTTGTAGAATGTAGAGCCAACCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR-3UTR CCA 90 bp | ATTAACATCAGTGTGCGCCTCAATAAGGTGAGCACTGTGATGATGCACGATTCTTTAAAGCAACTTCACTaGATCTCAGCTGAAGGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: INISVRLNKVSTVMMHDSLKQLH*ISAEGL Trigger: GAGCCCTTCAGCTGAGATCCAGTGAAGTTGCTTTAA...AGAATCGTGCATCATCACAGTGCTCACCTTATTGAGGCGCACACTGATGTTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| 3UTR-3UTR CCA 90 bp | GCTACCATGGAGACCACATGGACAGCCACAGTTCCACAGATTACAAAAGACTGGGTGCCTGAAATCTTCTaGGTTGTATTTCTATGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: ATMETTWTATVPQITKDWVPEIF*VVFLCF Trigger: GAAACATAGAAATACAACCCAGAAGATTTCAGGCAC...CCAGTCTTTTGTAATCTGTGGAACTGTGGCTGTCCATGTGGTCTCCATGGTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097521.12 |
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| 3UTR CAA 90 bp | CCAATATATGATATGAAAATGAGCAGTGGAAGCTACTCAGAGTTTTaGATCTGCTGCCTCTTAGACAGACATGTGCGTCTGGCTAGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: PIYDMKMSSGSYSEF*ICCLLDRHVRLASR Trigger: CCTACTAGCCAGACGCACATGTCTGTCTAAGAGGCAGCAGATCAAAAACTCTGAGTAGCTTCCACTGCTCATTTTCATATCATATATTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR CAA 90 bp | GTCATAAATCCCAAAGGCCTTTCCTCACATAAATTCACGAGGGATTaGCTGGCCTTTTATGATATCAGCCACCAAGACCTACTAGCTAGA | + |
|
Preference number: 2 (lower is better) Translates to: VINPKGLSSHKFTRD*LAFYDISHQDLLAR Trigger: TCTAGCTAGTAGGTCTTGGTGGCTGATATCATAAAAGGCCAGCAAATCCCTCGTGAATTTATGTGAGGAAAGGCCTTTGGGATTTATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR-3UTR CCA 90 bp | GTGTTGACTTATTTTAGAGTTCACAACTCAAATGCGCGTGGTAGCGCAGAAACTCCAGCTGAGAGTTACTaGAGTGTTTCCGATTCTATC | + |
|
Preference number: 2 (lower is better) Translates to: VLTYFRVHNSNARGSAETPAESY*SVSDSI Trigger: GATAGAATCGGAAACACTCCAGTAACTCTCAGCTGG...AGTTTCTGCGCTACCACGCGCATTTGAGTTGTGAACTCTAAAATAAGTCAACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR-3UTR GCA 90 bp | TATGTTAAATATGTTAAGGAAATACCTCTAACTAAGATTGCCATGGTTCTCCGGTCTCTGTGGCTTGTCTaGAGAGCTTCACGGCTCAAC | + |
|
Preference number: 2 (lower is better) Translates to: YVKYVKEIPLTKIAMVLRSLWLV*RASRLN Trigger: GTTGAGCCGTGAAGCTCTGCAGACAAGCCACAGAGA...CCGGAGAACCATGGCAATCTTAGTTAGAGGTATTTCCTTAACATATTTAACATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| 3UTR CAA 90 bp | GTCTATGGTTGCTTTGAACTTGTCAGAGCCTTTTGTATTAGTGGCTaGTTTTCATATGCCTCAGTGCCCAGCATAGAAGATATACATCGT | + |
|
Preference number: 2 (lower is better) Translates to: VYGCFELVRAFCISG*FSYASVPSIEDIHR Trigger: ACGATGTATATCTTCTATGCTGGGCACTGAGGCATATGAAAACAAGCCACTAATACAAAAGGCTCTGACAAGTTCAAAGCAACCATAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR-3UTR TCA 90 bp | GTGTTGACTTATTTTAGAGTTCACAACTCAAATGCGCGTGGTAGCGCAGAAACTAAGTACATAAAAGCCTaGATCTGTCCCAATAGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: VLTYFRVHNSNARGSAETKYIKA*ICPNSS Trigger: GGAACTATTGGGACAGATTCAGGCTTTTATGTACTT...AGTTTCTGCGCTACCACGCGCATTTGAGTTGTGAACTCTAAAATAAGTCAACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR-3UTR TCA 90 bp | TATGTTAAATATGTTAAGGAAATACCTCTAACTAAGATTGCCATGGTTCTCCGGAAGTACATAAAAGCCTaGATCTGTCCCAATAGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: YVKYVKEIPLTKIAMVLRKYIKA*ICPNSS Trigger: GGAACTATTGGGACAGATTCAGGCTTTTATGTACTT...CCGGAGAACCATGGCAATCTTAGTTAGAGGTATTTCCTTAACATATTTAACATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR GCA 72 bp | GGGTCACATGGGGAGCAGCACTGCCTGGCAACGGGGTaGAGGCCAGTCCTTTCCTGTGAGCTCAGGTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: GSHGEQHCLATG*RPVLSCELRSA Trigger: AGCTGACCTGAGCTCACAGGAAAGGACTGGCCTGCACCCCGTTGCCAGGCAGTGCTGCTCCCCATGTGACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097521.12 |
||
| 3UTR GCA 72 bp | CACCTGGGCAGGACACTGTGCCGCCTCGTTCCATCCTaGAGGTGGGGAAGTCAGCAGAGAGGACGTGGACTC | + |
|
Preference number: 3 (lower is better) Translates to: HLGRTLCRLVPS*RWGSQQRGRGL Trigger: GAGTCCACGTCCTCTCTGCTGACTTCCCCACCTGCAGGATGGAACGAGGCGGCACAGTGTCCTGCCCAGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR GCA 72 bp | CTTCCACCACGGAGGAGTGGAGAGCTACTGCTCCTCTaGGCCCACAGGAGCTTCTCCTCCAGCCCAGTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: LPPRRSGELLLL*AHRSFSSSPVN Trigger: GTTCACTGGGCTGGAGGAGAAGCTCCTGTGGGCGCAGAGGAGCAGTAGCTCTCCACTCCTCCGTGGTGGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR GCA 72 bp | ATTGCCATGGTTCTCCGGGACACTGGAGCCGGCTGCTaGTCCAGGCTGGATGCCTGGCTGAGGTCTTCCATC | + |
|
Preference number: 3 (lower is better) Translates to: IAMVLRDTGAGC*SRLDAWLRSSI Trigger: GATGGAAGACCTCAGCCAGGCATCCAGCCTGGAGCAGCAGCCGGCTCCAGTGTCCCGGAGAACCATGGCAAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR GCA 72 bp | AAGATTGCCATGGTTCTCCGGGACACTGGAGCCGGCTaGTGCTCCAGGCTGGATGCCTGGCTGAGGTCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: KIAMVLRDTGAG*CSRLDAWLRSS Trigger: GGAAGACCTCAGCCAGGCATCCAGCCTGGAGCAGCAGCCGGCTCCAGTGTCCCGGAGAACCATGGCAATCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR CCA 72 bp | AAACCAGAGGAGGGTCACATGGGGAGCAGCACTGCCTaGCAACGGGGTGCAGGCCAGTCCTTTCCTGTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: KPEEGHMGSSTA*QRGAGQSFPVS Trigger: GCTCACAGGAAAGGACTGGCCTGCACCCCGTTGCCAGGCAGTGCTGCTCCCCATGTGACCCTCCTCTGGTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097521.12 |
||
| 3UTR CCA 72 bp | AGCGGACATAGTGACAGAAACCAGAGGAGGGTCACATaGGGAGCAGCACTGCCTGGCAACGGGGTGCAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: SGHSDRNQRRVT*GAALPGNGVQA Trigger: GGCCTGCACCCCGTTGCCAGGCAGTGCTGCTCCCCATGTGACCCTCCTCTGGTTTCTGTCACTATGTCCGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097521.12 |
||
| 3UTR CCA 72 bp | GGCAGGACACTGTGCCGCCTCGTTCCATCCTGCAGGTaGGGAAGTCAGCAGAGAGGACGTGGACTCCAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: GRTLCRLVPSCR*GSQQRGRGLQS Trigger: AGACTGGAGTCCACGTCCTCTCTGCTGACTTCCCCACCTGCAGGATGGAACGAGGCGGCACAGTGTCCTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR GCA 72 bp | ACAGAAACCAGAGGAGGGTCACATGGGGAGCAGCACTaGCTGGCAACGGGGTGCAGGCCAGTCCTTTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: TETRGGSHGEQH*LATGCRPVLSC Trigger: ACAGGAAAGGACTGGCCTGCACCCCGTTGCCAGGCAGTGCTGCTCCCCATGTGACCCTCCTCTGGTTTCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097521.12 |
||
| 3UTR GCA 72 bp | AACCCTGAGGCAGAAGCCTCCCGCAATGAGCAGAGCTaGACAGCAGTGCGTATGCAGCAGCTTCAGAGGACC | + |
|
Preference number: 3 (lower is better) Translates to: NPEAEASRNEQS*TAVRMQQLQRT Trigger: GGTCCTCTGAAGCTGCTGCATACGCACTGCTGTGCAGCTCTGCTCATTGCGGGAGGCTTCTGCCTCAGGGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR GCA 72 bp | TCTGGGTGGCACCACTTCCTGGTGGAGACCCTGGACTaGAGAAATGGAGAAAGGCCCCAGGCAGTGAGAATG | + |
|
Preference number: 3 (lower is better) Translates to: SGWHHFLVETLD*RNGERPQAVRM Trigger: CATTCTCACTGCCTGGGGCCTTTCTCCATTTCTGCAGTCCAGGGTCTCCACCAGGAAGTGGTGCCACCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR GCA 72 bp | ATCTCAGCTGAAGGGCTCGCCACACTGCTGCTAGCTTaGTTCTCTGTGGCTTGTCTGCAGAGCTTCACGGCT | + |
|
Preference number: 3 (lower is better) Translates to: ISAEGLATLLLA*FSVACLQSFTA Trigger: AGCCGTGAAGCTCTGCAGACAAGCCACAGAGAAGCAAGCTAGCAGCAGTGTGGCGAGCCCTTCAGCTGAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR GCA 72 bp | CAGAAGCCTCCCGCAATGAGCAGAGCTGCACAGCAGTaGGTATGCAGCAGCTTCAGAGGACCTGGTAATTCC | + |
|
Preference number: 3 (lower is better) Translates to: QKPPAMSRAAQQ*VCSSFRGPGNS Trigger: GGAATTACCAGGTCCTCTGAAGCTGCTGCATACGCACTGCTGTGCAGCTCTGCTCATTGCGGGAGGCTTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR GCA 72 bp | GATGTGGTATGGCAGGCAGGTAGAGCTGCACCCACCTaGAGCTGTGTGTGTGGTGTGATGGAAGCACATCTG | + |
|
Preference number: 3 (lower is better) Translates to: DVVWQAGRAAPT*SCVCGVMEAHL Trigger: CAGATGTGCTTCCATCACACCACACACACAGCTGCAGGTGGGTGCAGCTCTACCTGCCTGCCATACCACATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR CCA 72 bp | TCCATCCTGCAGGTGGGGAAGTCAGCAGAGAGGACGTaGACTCCAGTCTTCCTAGTGATCTTCAGCAGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: SILQVGKSAERT*TPVFLVIFSSV Trigger: GACACTGCTGAAGATCACTAGGAAGACTGGAGTCCACGTCCTCTCTGCTGACTTCCCCACCTGCAGGATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR-3UTR CAA 90 bp | ATACCTCTAACTAAGATTGCCATGGTTCTCCGGGACACTGGAGCCGGCTGCTGCCACACTGCTGCTAGCTaGCTTCTCTGTGGCTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: IPLTKIAMVLRDTGAGCCHTAAS*LLCGLS Trigger: AGACAAGCCACAGAGAAGCAAGCTAGCAGCAGTGTG...GCAGCAGCCGGCTCCAGTGTCCCGGAGAACCATGGCAATCTTAGTTAGAGGTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR GCA 72 bp | ATGCACCTTCCAGTGCATCTCTGTGTGAGTCAGTCATaGTCACAGAGGATCCTCTCACTTCCACCACGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: MHLPVHLCVSQS*SQRILSLPPRR Trigger: CCTCCGTGGTGGAAGTGAGAGGATCCTCTGTGAGCATGACTGACTCACACAGAGATGCACTGGAAGGTGCAT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR GCA 72 bp | CAACTGCCACGGCCGAGGATTGGCACAGCATGCAAATaGAGCAGGAAAGCCATTCCCTACTTCATCTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: QLPRPRIGTACK*SRKAIPYFISF Trigger: GAAGGAGATGAAGTAGGGAATGGCTTTCCTGCTGCATTTGCATGCTGTGCCAATCCTCGGCCGTGGCAGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR CCA 72 bp | ACAGACATGTGCGTCTGGCTAGTAGGTCTTGATGGCTaGTATGGCAAAGCCAGCAAGGCCCTCATGAGCGTA | + |
|
Preference number: 3 (lower is better) Translates to: TDMCVWLVGLDG*YGKASKALMSV Trigger: TACGCTCATGAGGGCCTTGCTGGCTTTGCCATACCAGCCATCAAGACCTACTAGCCAGACGCACATGTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR TCA 72 bp | TCCTACATTCCATGTTCAATACTGCACAGAAGGGGGTaGGGTGAGTTACGTGCTCTCAGTCAGAGCACCGGG | + |
|
Preference number: 3 (lower is better) Translates to: SYIPCSILHRRG*GELRALSQSTG Trigger: CCCGGTGCTCTGACTGAGAGCACGTAACTCACCTCACCCCCTTCTGTGCAGTATTGAACATGGAATGTAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR TCA 72 bp | TGCGTATGCAGCAGCTTCAGAGGACCTGGTAATTCCTaGGCAATCAACAACGAACCCTGGCTCCCAAATCCC | + |
|
Preference number: 3 (lower is better) Translates to: CVCSSFRGPGNS*AINNEPWLPNP Trigger: GGGATTTGGGAGCCAGGGTTCGTTGTTGATTGCTCAGGAATTACCAGGTCCTCTGAAGCTGCTGCATACGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR TCA 72 bp | ATCATGGGGTGGCCTGTGCCATGGTTAGTGCTGTTCTaGAATGATCTGGAATCACTCTGGGCTCCTTACGGG | + |
|
Preference number: 3 (lower is better) Translates to: IMGWPVPWLVLF*NDLESLWAPYG Trigger: CCCGTAAGGAGCCCAGAGTGATTCCAGATCATTTCAGAACAGCACTAACCATGGCACAGGCCACCCCATGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR TCA 72 bp | CTCTTAGACAGACATGTGCGTCTGGCTAGTAGGTCTTaGTGGCTGGTATGGCAAAGCCAGCAAGGCCCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LLDRHVRLASRS*WLVWQSQQGPH Trigger: ATGAGGGCCTTGCTGGCTTTGCCATACCAGCCATCAAGACCTACTAGCCAGACGCACATGTCTGTCTAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR GCA 72 bp | CAGCGTGCTGTCCCTCAGGCTGAGCTTTCATCCAAATaGAGCTTTTCAAGACCAACCCTCATCGAGCTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: QRAVPQAELSSK*SFSRPTLIELA Trigger: AGCAAGCTCGATGAGGGTTGGTCTTGAAAAGCTGCATTTGGATGAAAGCTCAGCCTGAGGGACAGCACGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR CCA 72 bp | AGAACGGGAAAAAGGAGGCCCACTGCCTGTCATGCATaGGTGTCTCAAAGCAGCAACAACAAAAGTGACCCG | + |
|
Preference number: 3 (lower is better) Translates to: RTGKRRPTACHA*VSQSSNNKSDP Trigger: CGGGTCACTTTTGTTGTTGCTGCTTTGAGACACCCATGCATGACAGGCAGTGGGCCTCCTTTTTCCCGTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097521.12 |
||
| 3UTR TCA 72 bp | GGTGAAATGACAGCGCCATCATTCCAAGGTGGTATCTaGCATCACACCAGGGGACATTTGTGGAGCCATCAC | + |
|
Preference number: 3 (lower is better) Translates to: GEMTAPSFQGGI*HHTRGHLWSHH Trigger: GTGATGGCTCCACAAATGTCCCCTGGTGTGATGTCAGATACCACCTTGGAATGATGGCGCTGTCATTTCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR TCA 72 bp | AGTGTAGGCCAGTGGCTACCTGAGCTCCAGGAGTTATaGATACTGTTCCTAGCACTCAGCCTACTGCACTCT | + |
|
Preference number: 3 (lower is better) Translates to: SVGQWLPELQEL*ILFLALSLLHS Trigger: AGAGTGCAGTAGGCTGAGTGCTAGGAACAGTATTCATAACTCCTGGAGCTCAGGTAGCCACTGGCCTACACT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR GCA 72 bp | GTAAAACAACTGCCACGGCCGAGGATTGGCACAGCATaGAAATGCAGCAGGAAAGCCATTCCCTACTTCATC | + |
|
Preference number: 3 (lower is better) Translates to: VKQLPRPRIGTA*KCSRKAIPYFI Trigger: GATGAAGTAGGGAATGGCTTTCCTGCTGCATTTGCATGCTGTGCCAATCCTCGGCCGTGGCAGTTGTTTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR GCA 72 bp | GTGAGCATGATACACCTGGACCATTTCCAGCTTCCTTaGTTTAGCCCTGTCCTGTTTCCAGAGCATCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: VSMIHLDHFQLP*FSPVLFPEHQQ Trigger: CTGCTGATGCTCTGGAAACAGGACAGGGCTAAAGCAAGGAAGCTGGAAATGGTCCAGGTGTATCATGCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR CCA 72 bp | CAGGCCACCGGTCAGCAAGCGCCTTTATCCTTTATCTaGCATCTCGCTGACCCTTTTTGGACTTTAATCAGG | + |
|
Preference number: 3 (lower is better) Translates to: QATGQQAPLSFI*HLADPFWTLIR Trigger: CCTGATTAAAGTCCAAAAAGGGTCAGCGAGATGCCAGATAAAGGATAAAGGCGCTTGCTGACCGGTGGCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097521.12 |
||
| 3UTR CCA 72 bp | CACACCAGGGGACATTTGTGGAGCCATCACACAAGGTaGTCCCTTGTTGTCACTATGATAGGCTCTGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: HTRGHLWSHHTR*SLVVTMIGSDR Trigger: TCTGTCAGAGCCTATCATAGTGACAACAAGGGACCACCTTGTGTGATGGCTCCACAAATGTCCCCTGGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR CCA 72 bp | AGATCTGGCTTTCCACATCTGTTAAAGCAACTTCACTaGATCTCAGCTGAAGGGCTCGCCACACTGCTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: RSGFPHLLKQLH*ISAEGLATLLL Trigger: TAGCAGCAGTGTGGCGAGCCCTTCAGCTGAGATCCAGTGAAGTTGCTTTAACAGATGTGGAAAGCCAGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR TCA 72 bp | TTGATGGCTGGTATGGCAAAGCCAGCAAGGCCCTCATaGGCGTATGTGGAAAAGGCCTTTGTGATTTATGAC | + |
|
Preference number: 3 (lower is better) Translates to: LMAGMAKPARPS*AYVEKAFVIYD Trigger: GTCATAAATCACAAAGGCCTTTTCCACATACGCTCATGAGGGCCTTGCTGGCTTTGCCATACCAGCCATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR GCA 72 bp | CAAGAGGTTGGCTCTACATTCTACAACAGTGTTCACTaGTTCCGATACCCATCATTTCCCATTGCGCCCACT | + |
|
Preference number: 3 (lower is better) Translates to: QEVGSTFYNSVH*FRYPSFPIAPT Trigger: AGTGGGCGCAATGGGAAATGATGGGTATCGGAAGCAGTGAACACTGTTGTAGAATGTAGAGCCAACCTCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR-3UTR CAA 90 bp | AAATACAGGGATGTTTCCACCTTCCCCACCCTACAGGATACTGGAGTTTTAAAGCACACTGCTGCTAGCTaGCTTCTCTGTGGCTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: KYRDVSTFPTLQDTGVLKHTAAS*LLCGLS Trigger: AGACAAGCCACAGAGAAGCAAGCTAGCAGCAGTGTG...CTTTAAAACTCCAGTATCCTGTAGGGTGGGGAAGGTGGAAACATCCCTGTATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR-3UTR CAA 90 bp | AAAAGTCATCTGCGCTGGGAATACAGTGGAAGATCTGGCTTTCCACATCTGTTACACACTGCTGCTAGCTaGCTTCTCTGTGGCTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: KSHLRWEYSGRSGFPHLLHTAAS*LLCGLS Trigger: AGACAAGCCACAGAGAAGCAAGCTAGCAGCAGTGTG...TAACAGATGTGGAAAGCCAGATCTTCCACTGTATTCCCAGCGCAGATGACTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR TCA 72 bp | TCATGCATGGGTGTCTCAAAGCAGCAACAACAAAAGTaGCCCGTGTACAATTTCATCCGTGTGAAGAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SCMGVSKQQQQK*PVYNFIRVKSR Trigger: CCTGCTCTTCACACGGATGAAATTGTACACGGGTCACTTTTGTTGTTGCTGCTTTGAGACACCCATGCATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097521.12 |
||
| 3UTR TCA 72 bp | AGTGTTTCCGATTCTATCGAGTCTAAGATAAACTTCTaGGTTATCCTCCTGGGCCTCTCTGTGGACAGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SVSDSIESKINF*VILLGLSVDRP Trigger: TGGCCTGTCCACAGAGAGGCCCAGGAGGATAACTCAGAAGTTTATCTTAGACTCGATAGAATCGGAAACACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR TCA 72 bp | AGAACTAGTGAGAGCCAGAGACTCTCTGAAGTTCTCTaGGAGTCGCAACTCAGCCCAGTTCAATATGGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: RTSESQRLSEVL*ESQLSPVQYGN Trigger: GTTTCCATATTGAACTGGGCTGAGTTGCGACTCTCAGAGAACTTCAGAGAGTCTCTGGCTCTCACTAGTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR GCA 72 bp | CAAATGCAGCTTTTCAAGACCAACCCTCATCGAGCTTaGTCCTGTGAGGTTTTCTGGGCTAAGTCCTTAGTA | + |
|
Preference number: 3 (lower is better) Translates to: QMQLFKTNPHRA*SCEVFWAKSLV Trigger: TACTAAGGACTTAGCCCAGAAAACCTCACAGGAGCAAGCTCGATGAGGGTTGGTCTTGAAAAGCTGCATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR CCA 72 bp | CCAGGTGGTCAAGATGACCAGCCAGCTGAGAGTTACTaGAGTGTTTCCGATTCTATCGAGTCTAAGATAAAC | + |
|
Preference number: 3 (lower is better) Translates to: PGGQDDQPAESY*SVSDSIESKIN Trigger: GTTTATCTTAGACTCGATAGAATCGGAAACACTCCAGTAACTCTCAGCTGGCTGGTCATCTTGACCACCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR-3UTR CAA 90 bp | GAGGTTGGCTCTACATTCTACAACAGTGTTCACTGCTTCCGATACCCATCATTTAAGCTCCAAAGACACTaGGATCACATTTCCTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: EVGSTFYNSVHCFRYPSFKLQRH*DHISSR Trigger: CCTGGAGGAAATGTGATCCAAGTGTCTTTGGAGCTT...AAATGATGGGTATCGGAAGCAGTGAACACTGTTGTAGAATGTAGAGCCAACCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR TCA 72 bp | TTCCCTAGCTTTGTTCCCTTCCATCTAAGACGGAGCTaGGCTCTAAACAAGCATCAAAGCCTGAAGCTCATT | + |
|
Preference number: 3 (lower is better) Translates to: FPSFVPFHLRRS*ALNKHQSLKLI Trigger: AATGAGCTTCAGGCTTTGATGCTTGTTTAGAGCTCAGCTCCGTCTTAGATGGAAGGGAACAAAGCTAGGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR TCA 72 bp | CTCAGGCACATCAGCCACGGAAACGGTGCCAATATATaGTATGAAAATGAGCAGTGGAAGCTACTCAGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LRHISHGNGANI*YENEQWKLLRV Trigger: AACTCTGAGTAGCTTCCACTGCTCATTTTCATATCATATATTGGCACCGTTTCCGTGGCTGATGTGCCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR GCA 72 bp | AAAATGAGCAGTGGAAGCTACTCAGAGTTTTTGATCTaGTGCCTCTTAGACAGACATGTGCGTCTGGCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: KMSSGSYSEFLI*CLLDRHVRLAS Trigger: ACTAGCCAGACGCACATGTCTGTCTAAGAGGCAGCAGATCAAAAACTCTGAGTAGCTTCCACTGCTCATTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR CCA 72 bp | ACCAACCCTCATCGAGCTTGCTCCTGTGAGGTTTTCTaGGCTAAGTCCTTAGTATTTAGTTCCTACATTCCA | + |
|
Preference number: 3 (lower is better) Translates to: TNPHRACSCEVF*AKSLVFSSYIP Trigger: TGGAATGTAGGAACTAAATACTAAGGACTTAGCCCAGAAAACCTCACAGGAGCAAGCTCGATGAGGGTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR CCA 72 bp | CTTGCTCCTGTATCATCTGCATCCTTTTTGTTCATCTaGTTGACCACACTCACCTCCGTCAAAACCATTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LAPVSSASFLFI*LTTLTSVKTIP Trigger: AGGAATGGTTTTGACGGAGGTGAGTGTGGTCAACCAGATGAACAAAAAGGATGCAGATGATACAGGAGCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR-3UTR CAA 90 bp | TATGTTAAATATGTTAAGGAAATACCTCTAACTAAGATTGCCATGGTTCTCCGGTGCCACGGCCGAGGATaGGCACAGCATGCAAATGCA | + |
|
Preference number: 3 (lower is better) Translates to: YVKYVKEIPLTKIAMVLRCHGRG*AQHANA Trigger: TGCATTTGCATGCTGTGCCAATCCTCGGCCGTGGCA...CCGGAGAACCATGGCAATCTTAGTTAGAGGTATTTCCTTAACATATTTAACATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR TCA 72 bp | CTTTCCTGTGAGCTCAGGTCAGCTTACACAGGTGCCTaGAATCTTCTGGGTTGTATTTCTATGTTTCTCATG | + |
|
Preference number: 3 (lower is better) Translates to: LSCELRSAYTGA*NLLGCISMFLM Trigger: CATGAGAAACATAGAAATACAACCCAGAAGATTTCAGGCACCTGTGTAAGCTGACCTGAGCTCACAGGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097521.12 |
||
| 3UTR GCA 72 bp | AGGAGTCATTTGTGTGGCGCCACGCTTACATTATTGTaGTTACTTGTCATAAATCCCAAAGGCCTTTCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: RSHLCGATLTLL*LLVINPKGLSS Trigger: TGAGGAAAGGCCTTTGGGATTTATGACAAGTAAGCACAATAATGTAAGCGTGGCGCCACACAAATGACTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR-3UTR CAA 90 bp | AAGCTCATTAACATCAGTGTGCGCCTCAATAAGGTGAGCACTGTGATGATGCACATTAAAGGCTTGATTTaGGTTTCTGCACTGTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: KLINISVRLNKVSTVMMHIKGLI*VSALFL Trigger: CAGGAACAGTGCAGAAACCAAAATCAAGCCTTTAAT...GTGCATCATCACAGTGCTCACCTTATTGAGGCGCACACTGATGTTAATGAGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR TCA 72 bp | AAACATTCTTTAAAACAGTGTAGGCCAGTGGCTACCTaGGCTCCAGGAGTTATGAATACTGTTCCTAGCACT | + |
|
Preference number: 3 (lower is better) Translates to: KHSLKQCRPVAT*APGVMNTVPST Trigger: AGTGCTAGGAACAGTATTCATAACTCCTGGAGCTCAGGTAGCCACTGGCCTACACTGTTTTAAAGAATGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR GCA 72 bp | ACTGTAGTAAGAAAAAGGGATTCACCCTCCCACTCATaGTGGAGGGTTTGGTCAAATAGATTAATGCAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: TVVRKRDSPSHS*WRVWSNRLMQF Trigger: AAACTGCATTAATCTATTTGACCAAACCCTCCAGCATGAGTGGGAGGGTGAATCCCTTTTTCTTACTACAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR CCA 72 bp | AGTTCTCTGAGAGTCGCAACTCAGCCCAGTTCAATATaGAAACTTAATCTAAGATTGCCAGATCTCCTAATC | + |
|
Preference number: 3 (lower is better) Translates to: SSLRVATQPSSI*KLNLRLPDLLI Trigger: GATTAGGAGATCTGGCAATCTTAGATTAAGTTTCCATATTGAACTGGGCTGAGTTGCGACTCTCAGAGAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| CDS-3UTR TCA 90 bp | GATTGCCATGGTTCTCCGGGACACTGGAGCCGGCTGCTGCTCCAGGCTGGATGCCCAGGAGCATGGGCCTaGCTTGCTTCTGCTCGATTA | + |
|
Preference number: 4 (lower is better) Translates to: DCHGSPGHWSRLLLQAGCPGAWA*LASARL Trigger: TAATCGAGCAGAAGCAAGTCAGGCCCATGCTCCTGG...GCATCCAGCCTGGAGCAGCAGCCGGCTCCAGTGTCCCGGAGAACCATGGCAATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR GCA 90 bp | ACTTCCACCACGGAGGAGTGGAGAGCTACTGCTCCTCTGCGCCCACAGGAGCTTGACGGCCTCCTCCGGTaGACAGTCAGCATCCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TSTTEEWRATAPLRPQELDGLLR*TVSIPQ Trigger: TTGAGGGATGCTGACTGTGCACCGGAGGAGGCCGTC...AAGCTCCTGTGGGCGCAGAGGAGCAGTAGCTCTCCACTCCTCCGTGGTGGAAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR TCA 90 bp | GAAGGGCTCGCCACACTGCTGCTAGCTTGCTTCTCTGTGGCTTGTCTGCAGAGCAATCGTCTCCTATCATaGCGGCCTCCTCCGGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: EGLATLLLACFSVACLQSNRLLS*RPPPVH Trigger: GTGCACCGGAGGAGGCCGTCATGATAGGAGACGATT...GCTCTGCAGACAAGCCACAGAGAAGCAAGCTAGCAGCAGTGTGGCGAGCCCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR TCA 90 bp | CACGGAGGAGTGGAGAGCTACTGCTCCTCTGCGCCCACAGGAGCTTCTCCTCCAAGCATGCCAATGTTCTaGGCCCCATCGACATCATCC | + |
|
Preference number: 4 (lower is better) Translates to: HGGVESYCSSAPTGASPPSMPMF*APSTSS Trigger: GGATGATGTCGATGGGGCTCAGAACATTGGCATGCT...TGGAGGAGAAGCTCCTGTGGGCGCAGAGGAGCAGTAGCTCTCCACTCCTCCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR GCA 90 bp | CGGAGGAGTGGAGAGCTACTGCTCCTCTGCGCCCACAGGAGCTTCTCCTCCAGCTGCGCCTGGCACAGCTaGATCTTCAATGTGAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RRSGELLLLCAHRSFSSSCAWHS*IFNVKC Trigger: ACACTTCACATTGAAGATGCAGCTGTGCCAGGCGCA...GCTGGAGGAGAAGCTCCTGTGGGCGCAGAGGAGCAGTAGCTCTCCACTCCTCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR GCA 90 bp | GATTGCCATGGTTCTCCGGGACACTGGAGCCGGCTGCTGCTCCAGGCTGGATGCTGCGCCTGGCACAGCTaGATCTTCAATGTGAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: DCHGSPGHWSRLLLQAGCCAWHS*IFNVKC Trigger: ACACTTCACATTGAAGATGCAGCTGTGCCAGGCGCA...GCATCCAGCCTGGAGCAGCAGCCGGCTCCAGTGTCCCGGAGAACCATGGCAATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR GCA 90 bp | GATTGCCATGGTTCTCCGGGACACTGGAGCCGGCTGCTGCTCCAGGCTGGATGCCTAAGATGCCCAGCATaGCAATGTTCTGAGCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: DCHGSPGHWSRLLLQAGCLRCPA*QCSEPH Trigger: ATGGGGCTCAGAACATTGGCATGCTGGGCATCTTAG...GCATCCAGCCTGGAGCAGCAGCCGGCTCCAGTGTCCCGGAGAACCATGGCAATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR TCA 90 bp | CGCCACACTGCTGCTAGCTTGCTTCTCTGTGGCTTGTCTGCAGAGCTTCACGGCATGTGGTCCACAGCGTaGGGGAAGCTCTCGCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RHTAASLLLCGLSAELHGMWSTA*GKLSQV Trigger: AACTTGCGAGAGCTTCCCTCACGCTGTGGACCACAT...GCCGTGAAGCTCTGCAGACAAGCCACAGAGAAGCAAGCTAGCAGCAGTGTGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR GCA 90 bp | CAACTTCACTGGATCTCAGCTGAAGGGCTCGCCACACTGCTGCTAGCTTGCTTCGACGGCCTCCTCCGGTaGACAGTCAGCATCCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QLHWISAEGLATLLLACFDGLLR*TVSIPQ Trigger: TTGAGGGATGCTGACTGTGCACCGGAGGAGGCCGTC...GAAGCAAGCTAGCAGCAGTGTGGCGAGCCCTTCAGCTGAGATCCAGTGAAGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR CCA 90 bp | TGCACAGAAGGGGGTGAGGTGAGTTACGTGCTCTCAGTCAGAGCACCGGGCACCAGCTTCCTGTGCGCCTaGCACAGCTGCATCTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: CTEGGEVSYVLSVRAPGTSFLCA*HSCIFN Trigger: ATTGAAGATGCAGCTGTGCCAGGCGCACAGGAAGCT...GGTGCCCGGTGCTCTGACTGAGAGCACGTAACTCACCTCACCCCCTTCTGTGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR TCA 90 bp | AGCAGAGCTGCACAGCAGTGCGTATGCAGCAGCTTCAGAGGACCTGGTAATTCCAATCGTCTCCTATCATaGCGGCCTCCTCCGGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SRAAQQCVCSSFRGPGNSNRLLS*RPPPVH Trigger: GTGCACCGGAGGAGGCCGTCATGATAGGAGACGATT...GGAATTACCAGGTCCTCTGAAGCTGCTGCATACGCACTGCTGTGCAGCTCTGCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR TCA 90 bp | CTCGCCACACTGCTGCTAGCTTGCTTCTCTGTGGCTTGTCTGCAGAGCTTCACGATGTGGTCCACAGCGTaGGGGAAGCTCTCGCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LATLLLACFSVACLQSFTMWSTA*GKLSQV Trigger: AACTTGCGAGAGCTTCCCTCACGCTGTGGACCACAT...CGTGAAGCTCTGCAGACAAGCCACAGAGAAGCAAGCTAGCAGCAGTGTGGCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR CAA 72 bp | GCTCGCCACACTGCTGCTAGCTTGCTTCTCTGTGGCTaGTCTGCAGAGCTTCACGGCTCAACTCTGGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: ARHTAASLLLCG*SAELHGSTLAS Trigger: AGATGCCAGAGTTGAGCCGTGAAGCTCTGCAGACAAGCCACAGAGAAGCAAGCTAGCAGCAGTGTGGCGAGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR TCA 90 bp | ACTTCCACCACGGAGGAGTGGAGAGCTACTGCTCCTCTGCGCCCACAGGAGCTTGCTGCATCTTCAATGTaGAGTGTGCCATTGAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: TSTTEEWRATAPLRPQELAASSM*SVPLRS Trigger: GGATCTCAATGGCACACTTCACATTGAAGATGCAGC...AAGCTCCTGTGGGCGCAGAGGAGCAGTAGCTCTCCACTCCTCCGTGGTGGAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR TCA 90 bp | CAACTTCACTGGATCTCAGCTGAAGGGCTCGCCACACTGCTGCTAGCTTGCTTCATGTGGTCCACAGCGTaGGGGAAGCTCTCGCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QLHWISAEGLATLLLACFMWSTA*GKLSQV Trigger: AACTTGCGAGAGCTTCCCTCACGCTGTGGACCACAT...GAAGCAAGCTAGCAGCAGTGTGGCGAGCCCTTCAGCTGAGATCCAGTGAAGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR CCA 90 bp | ACTTCCACCACGGAGGAGTGGAGAGCTACTGCTCCTCTGCGCCCACAGGAGCTTAAAGAATGTCTTCTCTaGTTTCCCCACCACCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: TSTTEEWRATAPLRPQELKECLL*FPHHHG Trigger: GCCATGGTGGTGGGGAAACCAGAGAAGACATTCTTT...AAGCTCCTGTGGGCGCAGAGGAGCAGTAGCTCTCCACTCCTCCGTGGTGGAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR TCA 90 bp | GAAGGGCTCGCCACACTGCTGCTAGCTTGCTTCTCTGTGGCTTGTCTGCAGAGCGCTGCATCTTCAATGTaGAGTGTGCCATTGAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: EGLATLLLACFSVACLQSAASSM*SVPLRS Trigger: GGATCTCAATGGCACACTTCACATTGAAGATGCAGC...GCTCTGCAGACAAGCCACAGAGAAGCAAGCTAGCAGCAGTGTGGCGAGCCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR TCA 90 bp | GAAACAAAGCAAGAGCCAGGATCAGCACACAAAGAGGCCCGGGAAACTCGTCCACCAGGAGCATGGGCCTaGCTTGCTTCTGCTCGATTA | + |
|
Preference number: 4 (lower is better) Translates to: ETKQEPGSAHKEARETRPPGAWA*LASARL Trigger: TAATCGAGCAGAAGCAAGTCAGGCCCATGCTCCTGG...TGGACGAGTTTCCCGGGCCTCTTTGTGTGCTGATCCTGGCTCTTGCTTTGTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097521.12 |
||
| CDS-3UTR TCA 90 bp | GTGCATCTCTGTGTGAGTCAGTCATGCTCACAGAGGATCCTCTCACTTCCACCAAATCGTCTCCTATCATaGCGGCCTCCTCCGGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VHLCVSQSCSQRILSLPPNRLLS*RPPPVH Trigger: GTGCACCGGAGGAGGCCGTCATGATAGGAGACGATT...TGGTGGAAGTGAGAGGATCCTCTGTGAGCATGACTGACTCACACAGAGATGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR GCA 90 bp | GCTCGCCACACTGCTGCTAGCTTGCTTCTCTGTGGCTTGTCTGCAGAGCTTCACTGCGCCTGGCACAGCTaGATCTTCAATGTGAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ARHTAASLLLCGLSAELHCAWHS*IFNVKC Trigger: ACACTTCACATTGAAGATGCAGCTGTGCCAGGCGCA...GTGAAGCTCTGCAGACAAGCCACAGAGAAGCAAGCTAGCAGCAGTGTGGCGAGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR GCA 90 bp | GCTCTCAGTCAGAGCACCGGGCACCTGCCAGTGTGTGAGTACGAAGTTAGGGCAATGAAAATGCTCTGGTaGCAGTCCAATGACCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALSQSTGHLPVCEYEVRAMKMLW*QSNDHS Trigger: GCTGTGGTCATTGGACTGGCACCAGAGCATTTTCAT...TGCCCTAACTTCGTACTCACACACTGGCAGGTGCCCGGTGCTCTGACTGAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR TCA 90 bp | GTGCATCTCTGTGTGAGTCAGTCATGCTCACAGAGGATCCTCTCACTTCCACCACCAGGAGCATGGGCCTaGCTTGCTTCTGCTCGATTA | + |
|
Preference number: 4 (lower is better) Translates to: VHLCVSQSCSQRILSLPPPGAWA*LASARL Trigger: TAATCGAGCAGAAGCAAGTCAGGCCCATGCTCCTGG...TGGTGGAAGTGAGAGGATCCTCTGTGAGCATGACTGACTCACACAGAGATGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR TCA 90 bp | TTCACGGCTCAACTCTGGCATCTTGCTGACAGCCTAATGCACCTTCCAGTGCATCCAGGAGCATGGGCCTaGCTTGCTTCTGCTCGATTA | + |
|
Preference number: 4 (lower is better) Translates to: FTAQLWHLADSLMHLPVHPGAWA*LASARL Trigger: TAATCGAGCAGAAGCAAGTCAGGCCCATGCTCCTGG...ATGCACTGGAAGGTGCATTAGGCTGTCAGCAAGATGCCAGAGTTGAGCCGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR TCA 90 bp | TTCACGGCTCAACTCTGGCATCTTGCTGACAGCCTAATGCACCTTCCAGTGCATATGTGGTCCACAGCGTaGGGGAAGCTCTCGCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FTAQLWHLADSLMHLPVHMWSTA*GKLSQV Trigger: AACTTGCGAGAGCTTCCCTCACGCTGTGGACCACAT...ATGCACTGGAAGGTGCATTAGGCTGTCAGCAAGATGCCAGAGTTGAGCCGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR CCA 90 bp | ACAAAGCAAGAGCCAGGATCAGCACACAAAGAGGCCCGGGAAACTCGTCCAACAAGCTTCCTGTGCGCCTaGCACAGCTGCATCTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TKQEPGSAHKEARETRPTSFLCA*HSCIFN Trigger: ATTGAAGATGCAGCTGTGCCAGGCGCACAGGAAGCT...TGTTGGACGAGTTTCCCGGGCCTCTTTGTGTGCTGATCCTGGCTCTTGCTTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097521.12 |
||
| CDS-3UTR CCA 90 bp | CACGGAGGAGTGGAGAGCTACTGCTCCTCTGCGCCCACAGGAGCTTCTCCTCCATCTCTTTGGTTGTATTaGTCACAAACCGAACCATCA | + |
|
Preference number: 4 (lower is better) Translates to: HGGVESYCSSAPTGASPPSLWLY*SQTEPS Trigger: TGATGGTTCGGTTTGTGACCAATACAACCAAAGAGA...TGGAGGAGAAGCTCCTGTGGGCGCAGAGGAGCAGTAGCTCTCCACTCCTCCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR TCA 90 bp | AGCAGTGCGTATGCAGCAGCTTCAGAGGACCTGGTAATTCCTGAGCAATCAACACCAGGAGCATGGGCCTaGCTTGCTTCTGCTCGATTA | + |
|
Preference number: 4 (lower is better) Translates to: SSAYAAASEDLVIPEQSTPGAWA*LASARL Trigger: TAATCGAGCAGAAGCAAGTCAGGCCCATGCTCCTGG...TGTTGATTGCTCAGGAATTACCAGGTCCTCTGAAGCTGCTGCATACGCACTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR TCA 90 bp | CAGGAGCTTCTCCTCCAGCCCAGTGAACCTGATGAATATTTTAACAGGAATGGCAATCGTCTCCTATCATaGCGGCCTCCTCCGGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QELLLQPSEPDEYFNRNGNRLLS*RPPPVH Trigger: GTGCACCGGAGGAGGCCGTCATGATAGGAGACGATT...GCCATTCCTGTTAAAATATTCATCAGGTTCACTGGGCTGGAGGAGAAGCTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR GCA 90 bp | AGGAGCTTCTCCTCCAGCCCAGTGAACCTGATGAATATTTTAACAGGAATGGCAGACGGCCTCCTCCGGTaGACAGTCAGCATCCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RSFSSSPVNLMNILTGMADGLLR*TVSIPQ Trigger: TTGAGGGATGCTGACTGTGCACCGGAGGAGGCCGTC...TGCCATTCCTGTTAAAATATTCATCAGGTTCACTGGGCTGGAGGAGAAGCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR CCA 90 bp | ACTTCCACCACGGAGGAGTGGAGAGCTACTGCTCCTCTGCGCCCACAGGAGCTTTCTCTTTGGTTGTATTaGTCACAAACCGAACCATCA | + |
|
Preference number: 4 (lower is better) Translates to: TSTTEEWRATAPLRPQELSLWLY*SQTEPS Trigger: TGATGGTTCGGTTTGTGACCAATACAACCAAAGAGA...AAGCTCCTGTGGGCGCAGAGGAGCAGTAGCTCTCCACTCCTCCGTGGTGGAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR TCA 90 bp | CAGGAGCTTCTCCTCCAGCCCAGTGAACCTGATGAATATTTTAACAGGAATGGCCCAGGAGCATGGGCCTaGCTTGCTTCTGCTCGATTA | + |
|
Preference number: 4 (lower is better) Translates to: QELLLQPSEPDEYFNRNGPGAWA*LASARL Trigger: TAATCGAGCAGAAGCAAGTCAGGCCCATGCTCCTGG...GCCATTCCTGTTAAAATATTCATCAGGTTCACTGGGCTGGAGGAGAAGCTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR GCA 90 bp | CATCCGTGTGAAGAGCAGGAAGCGGACATAGTGACAGAAACCAGAGGAGGGTCAATGAAAATGCTCTGGTaGCAGTCCAATGACCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: HPCEEQEADIVTETRGGSMKMLW*QSNDHS Trigger: GCTGTGGTCATTGGACTGGCACCAGAGCATTTTCAT...TGACCCTCCTCTGGTTTCTGTCACTATGTCCGCTTCCTGCTCTTCACACGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097521.12 |
||
| CDS-3UTR GCA 90 bp | GAGGTTGGCTCTACATTCTACAACAGTGTTCACTGCTTCCGATACCCATCATTTGACGGCCTCCTCCGGTaGACAGTCAGCATCCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: EVGSTFYNSVHCFRYPSFDGLLR*TVSIPQ Trigger: TTGAGGGATGCTGACTGTGCACCGGAGGAGGCCGTC...AAATGATGGGTATCGGAAGCAGTGAACACTGTTGTAGAATGTAGAGCCAACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| CDS-3UTR CCA 90 bp | CTCGCCACACTGCTGCTAGCTTGCTTCTCTGTGGCTTGTCTGCAGAGCTTCACGATAATGAAAATGCTCTaGTGCCAGTCCAATGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LATLLLACFSVACLQSFTIMKML*CQSNDH Trigger: GTGGTCATTGGACTGGCACCAGAGCATTTTCATTAT...CGTGAAGCTCTGCAGACAAGCCACAGAGAAGCAAGCTAGCAGCAGTGTGGCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR TCA 90 bp | CATCCGTGTGAAGAGCAGGAAGCGGACATAGTGACAGAAACCAGAGGAGGGTCATGTGAAGTGTGCCATTaGGATCCACCAAAACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HPCEEQEADIVTETRGGSCEVCH*DPPKQL Trigger: AAGCTGTTTTGGTGGATCTCAATGGCACACTTCACA...TGACCCTCCTCTGGTTTCTGTCACTATGTCCGCTTCCTGCTCTTCACACGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097521.12 |
||
| CDS-3UTR TCA 90 bp | AAAAGTCATCTGCGCTGGGAATACAGTGGAAGATCTGGCTTTCCACATCTGTTAAATCGTCTCCTATCATaGCGGCCTCCTCCGGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KSHLRWEYSGRSGFPHLLNRLLS*RPPPVH Trigger: GTGCACCGGAGGAGGCCGTCATGATAGGAGACGATT...TAACAGATGTGGAAAGCCAGATCTTCCACTGTATTCCCAGCGCAGATGACTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR GCA 90 bp | GATGATGCACGATTCTATCCTAATAATTCAGTGCCCAAGAGCCCCGTAAAACAAGACGGCCTCCTCCGGTaGACAGTCAGCATCCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: DDARFYPNNSVPKSPVKQDGLLR*TVSIPQ Trigger: TTGAGGGATGCTGACTGTGCACCGGAGGAGGCCGTC...TTGTTTTACGGGGCTCTTGGGCACTGAATTATTAGGATAGAATCGTGCATCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR CCA 90 bp | CAGGAGCTTCTCCTCCAGCCCAGTGAACCTGATGAATATTTTAACAGGAATGGCAGCTTCCTGTGCGCCTaGCACAGCTGCATCTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: QELLLQPSEPDEYFNRNGSFLCA*HSCIFN Trigger: ATTGAAGATGCAGCTGTGCCAGGCGCACAGGAAGCT...GCCATTCCTGTTAAAATATTCATCAGGTTCACTGGGCTGGAGGAGAAGCTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR CCA 90 bp | CAACTTCACTGGATCTCAGCTGAAGGGCTCGCCACACTGCTGCTAGCTTGCTTCATAATGAAAATGCTCTaGTGCCAGTCCAATGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: QLHWISAEGLATLLLACFIMKML*CQSNDH Trigger: GTGGTCATTGGACTGGCACCAGAGCATTTTCATTAT...GAAGCAAGCTAGCAGCAGTGTGGCGAGCCCTTCAGCTGAGATCCAGTGAAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR CAA 72 bp | TGTGGTGTGATGGAAGCACATCTGGCCACCAAGAGGTaGGCTCTACATTCTACAACAGTGTTCACTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CGVMEAHLATKR*ALHSTTVFTAS Trigger: GGAAGCAGTGAACACTGTTGTAGAATGTAGAGCCAACCTCTTGGTGGCCAGATGTGCTTCCATCACACCACA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| CDS-3UTR TCA 90 bp | CTGTTAAAGCAACTTCACTGGATCTCAGCTGAAGGGCTCGCCACACTGCTGCTATGTGAAGTGTGCCATTaGGATCCACCAAAACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLKQLHWISAEGLATLLLCEVCH*DPPKQL Trigger: AAGCTGTTTTGGTGGATCTCAATGGCACACTTCACA...TAGCAGCAGTGTGGCGAGCCCTTCAGCTGAGATCCAGTGAAGTTGCTTTAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR TCA 90 bp | AAGGAAATACCTCTAACTAAGATTGCCATGGTTCTCCGGGACACTGGAGCCGGCTGTGAAGTGTGCCATTaGGATCCACCAAAACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KEIPLTKIAMVLRDTGAGCEVCH*DPPKQL Trigger: AAGCTGTTTTGGTGGATCTCAATGGCACACTTCACA...GCCGGCTCCAGTGTCCCGGAGAACCATGGCAATCTTAGTTAGAGGTATTTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR TCA 90 bp | GCCTGTCATGCATGGGTGTCTCAAAGCAGCAACAACAAAAGTGACCCGTGTACAGCTGCATCTTCAATGTaGAGTGTGCCATTGAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: ACHAWVSQSSNNKSDPCTAASSM*SVPLRS Trigger: GGATCTCAATGGCACACTTCACATTGAAGATGCAGC...TGTACACGGGTCACTTTTGTTGTTGCTGCTTTGAGACACCCATGCATGACAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097521.12 |
||
| CDS-3UTR TCA 90 bp | AATGCACCTTCCAGTGCATCTCTGTGTGAGTCAGTCATGCTCACAGAGGATCCTGCTGCATCTTCAATGTaGAGTGTGCCATTGAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: NAPSSASLCESVMLTEDPAASSM*SVPLRS Trigger: GGATCTCAATGGCACACTTCACATTGAAGATGCAGC...AGGATCCTCTGTGAGCATGACTGACTCACACAGAGATGCACTGGAAGGTGCATT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR TCA 90 bp | GCAAGGTTTAGGGTTGGCTGCAATCCAATCCCCCTCTTTCTAATTAATGCACAAATGTGGTCCACAGCGTaGGGGAAGCTCTCGCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: ARFRVGCNPIPLFLINAQMWSTA*GKLSQV Trigger: AACTTGCGAGAGCTTCCCTCACGCTGTGGACCACAT...TTGTGCATTAATTAGAAAGAGGGGGATTGGATTGCAGCCAACCCTAAACCTTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR GCA 90 bp | AATGCACCTTCCAGTGCATCTCTGTGTGAGTCAGTCATGCTCACAGAGGATCCTATGAAAATGCTCTGGTaGCAGTCCAATGACCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: NAPSSASLCESVMLTEDPMKMLW*QSNDHS Trigger: GCTGTGGTCATTGGACTGGCACCAGAGCATTTTCAT...AGGATCCTCTGTGAGCATGACTGACTCACACAGAGATGCACTGGAAGGTGCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR GCA 90 bp | CGCCACACTGCTGCTAGCTTGCTTCTCTGTGGCTTGTCTGCAGAGCTTCACGGCTTTTTCTTCATCTGCTaGTTTGTATTTCCCGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RHTAASLLLCGLSAELHGFFFIC*FVFPGF Trigger: AAAACCGGGAAATACAAAGCAGCAGATGAAGAAAAA...GCCGTGAAGCTCTGCAGACAAGCCACAGAGAAGCAAGCTAGCAGCAGTGTGGCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR CCA 90 bp | CTGCGCTGGGAATACAGTGGAAGATCTGGCTTTCCACATCTGTTAAAGCAACTTAGCTTCCTGTGCGCCTaGCACAGCTGCATCTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LRWEYSGRSGFPHLLKQLSFLCA*HSCIFN Trigger: ATTGAAGATGCAGCTGTGCCAGGCGCACAGGAAGCT...AAGTTGCTTTAACAGATGTGGAAAGCCAGATCTTCCACTGTATTCCCAGCGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR CCA 90 bp | AATGCACCTTCCAGTGCATCTCTGTGTGAGTCAGTCATGCTCACAGAGGATCCTTGGCTTTCGTGTCTGTaGCATACTCTAAGGCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NAPSSASLCESVMLTEDPWLSCL*HTLRQS Trigger: TGACTGCCTTAGAGTATGCCACAGACACGAAAGCCA...AGGATCCTCTGTGAGCATGACTGACTCACACAGAGATGCACTGGAAGGTGCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR CCA 90 bp | TGCGCCCACAGGAGCTTCTCCTCCAGCCCAGTGAACCTGATGAATATTTTAACATGGCTTTCGTGTCTGTaGCATACTCTAAGGCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CAHRSFSSSPVNLMNILTWLSCL*HTLRQS Trigger: TGACTGCCTTAGAGTATGCCACAGACACGAAAGCCA...TGTTAAAATATTCATCAGGTTCACTGGGCTGGAGGAGAAGCTCCTGTGGGCGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR CCA 90 bp | AGCAGTGCGTATGCAGCAGCTTCAGAGGACCTGGTAATTCCTGAGCAATCAACAAAAGAATGTCTTCTCTaGTTTCCCCACCACCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSAYAAASEDLVIPEQSTKECLL*FPHHHG Trigger: GCCATGGTGGTGGGGAAACCAGAGAAGACATTCTTT...TGTTGATTGCTCAGGAATTACCAGGTCCTCTGAAGCTGCTGCATACGCACTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR CAA 72 bp | GTTGACCACACTCACCTCCGTCAAAACCATTCCTGGTaGTCTTTATCACTTCCCAGCCACTCATACTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VDHTHLRQNHSW*SLSLPSHSYCL Trigger: CAGACAGTATGAGTGGCTGGGAAGTGATAAAGACAACCAGGAATGGTTTTGACGGAGGTGAGTGTGGTCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| CDS-3UTR TCA 90 bp | AAAAAGTCATCTGCGCTGGGAATACAGTGGAAGATCTGGCTTTCCACATCTGTTAGCATGCCAATGTTCTaGGCCCCATCGACATCATCC | + |
|
Preference number: 4 (lower is better) Translates to: KKSSALGIQWKIWLSTSVSMPMF*APSTSS Trigger: GGATGATGTCGATGGGGCTCAGAACATTGGCATGCT...AACAGATGTGGAAAGCCAGATCTTCCACTGTATTCCCAGCGCAGATGACTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR TCA 90 bp | TTGCAGGTGCCTAAGGACTTTAATTTCATGTTACTGGAGCCATTGATCCAACGCAGCATGCCAATGTTCTaGGCCCCATCGACATCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LQVPKDFNFMLLEPLIQRSMPMF*APSTSS Trigger: GGATGATGTCGATGGGGCTCAGAACATTGGCATGCT...GCGTTGGATCAATGGCTCCAGTAACATGAAATTAAAGTCCTTAGGCACCTGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| CDS-3UTR TCA 90 bp | ATTAACATCAGTGTGCGCCTCAATAAGGTGAGCACTGTGATGATGCACGATTCTAGCATGCCAATGTTCTaGGCCCCATCGACATCATCC | + |
|
Preference number: 4 (lower is better) Translates to: INISVRLNKVSTVMMHDSSMPMF*APSTSS Trigger: GGATGATGTCGATGGGGCTCAGAACATTGGCATGCT...AGAATCGTGCATCATCACAGTGCTCACCTTATTGAGGCGCACACTGATGTTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR GCA 90 bp | CTCCATGCAAATGACTGTAGTAAGAAAAAGGGATTCACCCTCCCACTCATGCTGCTAAGATGCCCAGCATaGCAATGTTCTGAGCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LHANDCSKKKGFTLPLMLLRCPA*QCSEPH Trigger: ATGGGGCTCAGAACATTGGCATGCTGGGCATCTTAG...CAGCATGAGTGGGAGGGTGAATCCCTTTTTCTTACTACAGTCATTTGCATGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| CDS-3UTR GCA 90 bp | CTCGCCACACTGCTGCTAGCTTGCTTCTCTGTGGCTTGTCTGCAGAGCTTCACGTTTTTCTTCATCTGCTaGTTTGTATTTCCCGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LATLLLACFSVACLQSFTFFFIC*FVFPGF Trigger: AAAACCGGGAAATACAAAGCAGCAGATGAAGAAAAA...CGTGAAGCTCTGCAGACAAGCCACAGAGAAGCAAGCTAGCAGCAGTGTGGCGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR TCA 90 bp | CTGCGCTGGGAATACAGTGGAAGATCTGGCTTTCCACATCTGTTAAAGCAACTTGCTGCATCTTCAATGTaGAGTGTGCCATTGAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: LRWEYSGRSGFPHLLKQLAASSM*SVPLRS Trigger: GGATCTCAATGGCACACTTCACATTGAAGATGCAGC...AAGTTGCTTTAACAGATGTGGAAAGCCAGATCTTCCACTGTATTCCCAGCGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR TCA 90 bp | TACAGTGGAAGATCTGGCTTTCCACATCTGTTAAAGCAACTTCACTGGATCTCAAGCATGCCAATGTTCTaGGCCCCATCGACATCATCC | + |
|
Preference number: 4 (lower is better) Translates to: YSGRSGFPHLLKQLHWISSMPMF*APSTSS Trigger: GGATGATGTCGATGGGGCTCAGAACATTGGCATGCT...TGAGATCCAGTGAAGTTGCTTTAACAGATGTGGAAAGCCAGATCTTCCACTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR GCA 90 bp | ATAAACTCATTAAGAAGCTACCATGGAGACCACATGGACAGCCACAGTTCCACATGCGCCTGGCACAGCTaGATCTTCAATGTGAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: INSLRSYHGDHMDSHSSTCAWHS*IFNVKC Trigger: ACACTTCACATTGAAGATGCAGCTGTGCCAGGCGCA...TGTGGAACTGTGGCTGTCCATGTGGTCTCCATGGTAGCTTCTTAATGAGTTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097521.12 |
||
| CDS-3UTR GCA 90 bp | TCCGTAAAGCCAAGAACAGAGCACTCACTAAGACACCATTTCCCTAGCTTTGTTTGCGCCTGGCACAGCTaGATCTTCAATGTGAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SVKPRTEHSLRHHFPSFVCAWHS*IFNVKC Trigger: ACACTTCACATTGAAGATGCAGCTGTGCCAGGCGCA...AACAAAGCTAGGGAAATGGTGTCTTAGTGAGTGCTCTGTTCTTGGCTTTACGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR GCA 90 bp | GCAAGGTTTAGGGTTGGCTGCAATCCAATCCCCCTCTTTCTAATTAATGCACAACTAAGATGCCCAGCATaGCAATGTTCTGAGCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ARFRVGCNPIPLFLINAQLRCPA*QCSEPH Trigger: ATGGGGCTCAGAACATTGGCATGCTGGGCATCTTAG...TTGTGCATTAATTAGAAAGAGGGGGATTGGATTGCAGCCAACCCTAAACCTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR CCA 90 bp | TACAGTGGAAGATCTGGCTTTCCACATCTGTTAAAGCAACTTCACTGGATCTCAAGCTTCCTGTGCGCCTaGCACAGCTGCATCTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: YSGRSGFPHLLKQLHWISSFLCA*HSCIFN Trigger: ATTGAAGATGCAGCTGTGCCAGGCGCACAGGAAGCT...TGAGATCCAGTGAAGTTGCTTTAACAGATGTGGAAAGCCAGATCTTCCACTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR CCA 90 bp | GTGCATCTCTGTGTGAGTCAGTCATGCTCACAGAGGATCCTCTCACTTCCACCATCTCTTTGGTTGTATTaGTCACAAACCGAACCATCA | + |
|
Preference number: 4 (lower is better) Translates to: VHLCVSQSCSQRILSLPPSLWLY*SQTEPS Trigger: TGATGGTTCGGTTTGTGACCAATACAACCAAAGAGA...TGGTGGAAGTGAGAGGATCCTCTGTGAGCATGACTGACTCACACAGAGATGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR CCA 90 bp | GTGCATCTCTGTGTGAGTCAGTCATGCTCACAGAGGATCCTCTCACTTCCACCACTTTCTTGCTCTCTTTaGTTGTATTGGTCACAAACC | + |
|
Preference number: 4 (lower is better) Translates to: VHLCVSQSCSQRILSLPPLSCSL*LYWSQT Trigger: GGTTTGTGACCAATACAACCAAAGAGAGCAAGAAAG...TGGTGGAAGTGAGAGGATCCTCTGTGAGCATGACTGACTCACACAGAGATGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR CCA 90 bp | CCGAGGATTGGCACAGCATGCAAATGCAGCAGGAAAGCCATTCCCTACTTCATCCTTTCTTGCTCTCTTTaGTTGTATTGGTCACAAACC | + |
|
Preference number: 4 (lower is better) Translates to: PRIGTACKCSRKAIPYFILSCSL*LYWSQT Trigger: GGTTTGTGACCAATACAACCAAAGAGAGCAAGAAAG...GATGAAGTAGGGAATGGCTTTCCTGCTGCATTTGCATGCTGTGCCAATCCTCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR CCA 90 bp | TTCACGGCTCAACTCTGGCATCTTGCTGACAGCCTAATGCACCTTCCAGTGCATCTTTCTTGCTCTCTTTaGTTGTATTGGTCACAAACC | + |
|
Preference number: 4 (lower is better) Translates to: FTAQLWHLADSLMHLPVHLSCSL*LYWSQT Trigger: GGTTTGTGACCAATACAACCAAAGAGAGCAAGAAAG...ATGCACTGGAAGGTGCATTAGGCTGTCAGCAAGATGCCAGAGTTGAGCCGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR CCA 90 bp | GCCTGTCATGCATGGGTGTCTCAAAGCAGCAACAACAAAAGTGACCCGTGTACAATAATGAAAATGCTCTaGTGCCAGTCCAATGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: ACHAWVSQSSNNKSDPCTIMKML*CQSNDH Trigger: GTGGTCATTGGACTGGCACCAGAGCATTTTCATTAT...TGTACACGGGTCACTTTTGTTGTTGCTGCTTTGAGACACCCATGCATGACAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097521.12 |
||
| 3UTR CAA 72 bp | GCTCCTGTATCATCTGCATCCTTTTTGTTCATCTGGTaGACCACACTCACCTCCGTCAAAACCATTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: APVSSASFLFIW*TTLTSVKTIPG Trigger: ACCAGGAATGGTTTTGACGGAGGTGAGTGTGGTCAACCAGATGAACAAAAAGGATGCAGATGATACAGGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| CDS-3UTR TCA 90 bp | AAGCTCATTAACATCAGTGTGCGCCTCAATAAGGTGAGCACTGTGATGATGCACTGTGAAGTGTGCCATTaGGATCCACCAAAACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KLINISVRLNKVSTVMMHCEVCH*DPPKQL Trigger: AAGCTGTTTTGGTGGATCTCAATGGCACACTTCACA...GTGCATCATCACAGTGCTCACCTTATTGAGGCGCACACTGATGTTAATGAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR GCA 90 bp | GGAATACAGTGGAAGATCTGGCTTTCCACATCTGTTAAAGCAACTTCACTGGATCTAAGATGCCCAGCATaGCAATGTTCTGAGCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GIQWKIWLSTSVKATSLDLRCPA*QCSEPH Trigger: ATGGGGCTCAGAACATTGGCATGCTGGGCATCTTAG...ATCCAGTGAAGTTGCTTTAACAGATGTGGAAAGCCAGATCTTCCACTGTATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR GCA 90 bp | GATGATGCACGATTCTATCCTAATAATTCAGTGCCCAAGAGCCCCGTAAAACAACTAAGATGCCCAGCATaGCAATGTTCTGAGCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: DDARFYPNNSVPKSPVKQLRCPA*QCSEPH Trigger: ATGGGGCTCAGAACATTGGCATGCTGGGCATCTTAG...TTGTTTTACGGGGCTCTTGGGCACTGAATTATTAGGATAGAATCGTGCATCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR CCA 90 bp | GCTACCATGGAGACCACATGGACAGCCACAGTTCCACAGATTACAAAAGACTGGCTTTCTTGCTCTCTTTaGTTGTATTGGTCACAAACC | + |
|
Preference number: 4 (lower is better) Translates to: ATMETTWTATVPQITKDWLSCSL*LYWSQT Trigger: GGTTTGTGACCAATACAACCAAAGAGAGCAAGAAAG...CCAGTCTTTTGTAATCTGTGGAACTGTGGCTGTCCATGTGGTCTCCATGGTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097521.12 |
||
| CDS-3UTR CCA 90 bp | AAAAGTCATCTGCGCTGGGAATACAGTGGAAGATCTGGCTTTCCACATCTGTTATGGCTTTCGTGTCTGTaGCATACTCTAAGGCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KSHLRWEYSGRSGFPHLLWLSCL*HTLRQS Trigger: TGACTGCCTTAGAGTATGCCACAGACACGAAAGCCA...TAACAGATGTGGAAAGCCAGATCTTCCACTGTATTCCCAGCGCAGATGACTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR CCA 90 bp | AAAAGTCATCTGCGCTGGGAATACAGTGGAAGATCTGGCTTTCCACATCTGTTAAAAGAATGTCTTCTCTaGTTTCCCCACCACCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: KSHLRWEYSGRSGFPHLLKECLL*FPHHHG Trigger: GCCATGGTGGTGGGGAAACCAGAGAAGACATTCTTT...TAACAGATGTGGAAAGCCAGATCTTCCACTGTATTCCCAGCGCAGATGACTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR CAA 72 bp | GGTAGGAGTCATTTGTGTGGCGCCACGCTTACATTATaGTGCTTACTTGTCATAAATCCCAAAGGCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GRSHLCGATLTL*CLLVINPKGLS Trigger: GGAAAGGCCTTTGGGATTTATGACAAGTAAGCACAATAATGTAAGCGTGGCGCCACACAAATGACTCCTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| CDS-3UTR GCA 90 bp | GGAATACAGTGGAAGATCTGGCTTTCCACATCTGTTAAAGCAACTTCACTGGATATGAAAATGCTCTGGTaGCAGTCCAATGACCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: GIQWKIWLSTSVKATSLDMKMLW*QSNDHS Trigger: GCTGTGGTCATTGGACTGGCACCAGAGCATTTTCAT...ATCCAGTGAAGTTGCTTTAACAGATGTGGAAAGCCAGATCTTCCACTGTATTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR GCA 90 bp | AAACAAAAGAGATTAGCAAGGTTTAGGGTTGGCTGCAATCCAATCCCCCTCTTTATGAAAATGCTCTGGTaGCAGTCCAATGACCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: KQKRLARFRVGCNPIPLFMKMLW*QSNDHS Trigger: GCTGTGGTCATTGGACTGGCACCAGAGCATTTTCAT...AAAGAGGGGGATTGGATTGCAGCCAACCCTAAACCTTGCTAATCTCTTTTGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR GCA 90 bp | CCGAGGATTGGCACAGCATGCAAATGCAGCAGGAAAGCCATTCCCTACTTCATCTTTTTCTTCATCTGCTaGTTTGTATTTCCCGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PRIGTACKCSRKAIPYFIFFFIC*FVFPGF Trigger: AAAACCGGGAAATACAAAGCAGCAGATGAAGAAAAA...GATGAAGTAGGGAATGGCTTTCCTGCTGCATTTGCATGCTGTGCCAATCCTCGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR CCA 90 bp | AAACAAAAGAGATTAGCAAGGTTTAGGGTTGGCTGCAATCCAATCCCCCTCTTTTGGCTTTCGTGTCTGTaGCATACTCTAAGGCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KQKRLARFRVGCNPIPLFWLSCL*HTLRQS Trigger: TGACTGCCTTAGAGTATGCCACAGACACGAAAGCCA...AAAGAGGGGGATTGGATTGCAGCCAACCCTAAACCTTGCTAATCTCTTTTGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR CCA 90 bp | GTGTTGACTTATTTTAGAGTTCACAACTCAAATGCGCGTGGTAGCGCAGAAACTTGGCTTTCGTGTCTGTaGCATACTCTAAGGCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLTYFRVHNSNARGSAETWLSCL*HTLRQS Trigger: TGACTGCCTTAGAGTATGCCACAGACACGAAAGCCA...AGTTTCTGCGCTACCACGCGCATTTGAGTTGTGAACTCTAAAATAAGTCAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| CDS-3UTR CCA 90 bp | ATACAGTGGAAGATCTGGCTTTCCACATCTGTTAAAGCAACTTCACTGGATCTCAAAGAATGTCTTCTCTaGTTTCCCCACCACCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: IQWKIWLSTSVKATSLDLKECLL*FPHHHG Trigger: GCCATGGTGGTGGGGAAACCAGAGAAGACATTCTTT...GAGATCCAGTGAAGTTGCTTTAACAGATGTGGAAAGCCAGATCTTCCACTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR CCA 90 bp | AAACAAAAGAGATTAGCAAGGTTTAGGGTTGGCTGCAATCCAATCCCCCTCTTTAAAGAATGTCTTCTCTaGTTTCCCCACCACCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: KQKRLARFRVGCNPIPLFKECLL*FPHHHG Trigger: GCCATGGTGGTGGGGAAACCAGAGAAGACATTCTTT...AAAGAGGGGGATTGGATTGCAGCCAACCCTAAACCTTGCTAATCTCTTTTGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR TCA 90 bp | TACAGTGGAAGATCTGGCTTTCCACATCTGTTAAAGCAACTTCACTGGATCTCATGTGAAGTGTGCCATTaGGATCCACCAAAACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: YSGRSGFPHLLKQLHWISCEVCH*DPPKQL Trigger: AAGCTGTTTTGGTGGATCTCAATGGCACACTTCACA...TGAGATCCAGTGAAGTTGCTTTAACAGATGTGGAAAGCCAGATCTTCCACTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR GCA 90 bp | AAAAAGTCATCTGCGCTGGGAATACAGTGGAAGATCTGGCTTTCCACATCTGTTCCAGTAGGTCTTTCTTaGTCTCTTTGGTTGTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: KKSSALGIQWKIWLSTSVPVGLS*SLWLYW Trigger: CCAATACAACCAAAGAGAGCAAGAAAGACCTACTGG...AACAGATGTGGAAAGCCAGATCTTCCACTGTATTCCCAGCGCAGATGACTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR GCA 90 bp | GTCATGCATGGGTGTCTCAAAGCAGCAACAACAAAAGTGACCCGTGTACAATTTCCAGTAGGTCTTTCTTaGTCTCTTTGGTTGTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: VMHGCLKAATTKVTRVQFPVGLS*SLWLYW Trigger: CCAATACAACCAAAGAGAGCAAGAAAGACCTACTGG...AAATTGTACACGGGTCACTTTTGTTGTTGCTGCTTTGAGACACCCATGCATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097521.12 |
||
| CDS-3UTR CCA 90 bp | CTGCGCTGGGAATACAGTGGAAGATCTGGCTTTCCACATCTGTTAAAGCAACTTCTTTCTTGCTCTCTTTaGTTGTATTGGTCACAAACC | + |
|
Preference number: 4 (lower is better) Translates to: LRWEYSGRSGFPHLLKQLLSCSL*LYWSQT Trigger: GGTTTGTGACCAATACAACCAAAGAGAGCAAGAAAG...AAGTTGCTTTAACAGATGTGGAAAGCCAGATCTTCCACTGTATTCCCAGCGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR CCA 90 bp | GCAAGGTTTAGGGTTGGCTGCAATCCAATCCCCCTCTTTCTAATTAATGCACAAATAATGAAAATGCTCTaGTGCCAGTCCAATGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: ARFRVGCNPIPLFLINAQIMKML*CQSNDH Trigger: GTGGTCATTGGACTGGCACCAGAGCATTTTCATTAT...TTGTGCATTAATTAGAAAGAGGGGGATTGGATTGCAGCCAACCCTAAACCTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR CAA 72 bp | GCCTACTGCACTCTGTATAGGAAGTCTATGGTTGCTTaGAACTTGTCAGAGCCTTTTGTATTAGTGGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AYCTLYRKSMVA*NLSEPFVLVAC Trigger: ACAAGCCACTAATACAAAAGGCTCTGACAAGTTCAAAGCAACCATAGACTTCCTATACAGAGTGCAGTAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| CDS-3UTR GCA 90 bp | AAACAAAAGAGATTAGCAAGGTTTAGGGTTGGCTGCAATCCAATCCCCCTCTTTCCAGTAGGTCTTTCTTaGTCTCTTTGGTTGTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: KQKRLARFRVGCNPIPLFPVGLS*SLWLYW Trigger: CCAATACAACCAAAGAGAGCAAGAAAGACCTACTGG...AAAGAGGGGGATTGGATTGCAGCCAACCCTAAACCTTGCTAATCTCTTTTGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR GCA 90 bp | TACAGTGGAAGATCTGGCTTTCCACATCTGTTAAAGCAACTTCACTGGATCTCACCAGTAGGTCTTTCTTaGTCTCTTTGGTTGTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: YSGRSGFPHLLKQLHWISPVGLS*SLWLYW Trigger: CCAATACAACCAAAGAGAGCAAGAAAGACCTACTGG...TGAGATCCAGTGAAGTTGCTTTAACAGATGTGGAAAGCCAGATCTTCCACTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR CCA 90 bp | CTGGGAATACAGTGGAAGATCTGGCTTTCCACATCTGTTAAAGCAACTTCACTGCTTTCTTGCTCTCTTTaGTTGTATTGGTCACAAACC | + |
|
Preference number: 4 (lower is better) Translates to: LGIQWKIWLSTSVKATSLLSCSL*LYWSQT Trigger: GGTTTGTGACCAATACAACCAAAGAGAGCAAGAAAG...CAGTGAAGTTGCTTTAACAGATGTGGAAAGCCAGATCTTCCACTGTATTCCCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR CCA 90 bp | GATGATGCACGATTCTATCCTAATAATTCAGTGCCCAAGAGCCCCGTAAAACAAATAATGAAAATGCTCTaGTGCCAGTCCAATGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: DDARFYPNNSVPKSPVKQIMKML*CQSNDH Trigger: GTGGTCATTGGACTGGCACCAGAGCATTTTCATTAT...TTGTTTTACGGGGCTCTTGGGCACTGAATTATTAGGATAGAATCGTGCATCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR CAA 72 bp | TGCTTTGAACTTGTCAGAGCCTTTTGTATTAGTGGCTaGTTTTCATATGCCTCAGTGCCCAGCATAGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: CFELVRAFCISG*FSYASVPSIED Trigger: ATCTTCTATGCTGGGCACTGAGGCATATGAAAACAAGCCACTAATACAAAAGGCTCTGACAAGTTCAAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR CAA 72 bp | ACTCAGCCCAGTTCAATATGGAAACTTAATCTAAGATaGCCAGATCTCCTAATCTTCCTAGAAACAGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: TQPSSIWKLNLR*PDLLIFLETAA Trigger: CGCTGCTGTTTCTAGGAAGATTAGGAGATCTGGCAATCTTAGATTAAGTTTCCATATTGAACTGGGCTGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| CDS-3UTR CCA 90 bp | AGGTGCCTGAAATCTTCTGGGTTGTATTTCTATGTTTCTCATGCCCAAGGCTTTTCTCTTTGGTTGTATTaGTCACAAACCGAACCATCA | + |
|
Preference number: 4 (lower is better) Translates to: RCLKSSGLYFYVSHAQGFSLWLY*SQTEPS Trigger: TGATGGTTCGGTTTGTGACCAATACAACCAAAGAGA...AAAGCCTTGGGCATGAGAAACATAGAAATACAACCCAGAAGATTTCAGGCACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097521.12 |
||
| CDS-3UTR CCA 90 bp | GGAATACAGTGGAAGATCTGGCTTTCCACATCTGTTAAAGCAACTTCACTGGATTCTCTTTGGTTGTATTaGTCACAAACCGAACCATCA | + |
|
Preference number: 4 (lower is better) Translates to: GIQWKIWLSTSVKATSLDSLWLY*SQTEPS Trigger: TGATGGTTCGGTTTGTGACCAATACAACCAAAGAGA...ATCCAGTGAAGTTGCTTTAACAGATGTGGAAAGCCAGATCTTCCACTGTATTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR TCA 90 bp | TATGTTAAATATGTTAAGGAAATACCTCTAACTAAGATTGCCATGGTTCTCCGGGCTGCATCTTCAATGTaGAGTGTGCCATTGAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: YVKYVKEIPLTKIAMVLRAASSM*SVPLRS Trigger: GGATCTCAATGGCACACTTCACATTGAAGATGCAGC...CCGGAGAACCATGGCAATCTTAGTTAGAGGTATTTCCTTAACATATTTAACATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR GCA 90 bp | ATTAACATCAGTGTGCGCCTCAATAAGGTGAGCACTGTGATGATGCACGATTCTTTTTTCTTCATCTGCTaGTTTGTATTTCCCGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: INISVRLNKVSTVMMHDSFFFIC*FVFPGF Trigger: AAAACCGGGAAATACAAAGCAGCAGATGAAGAAAAA...AGAATCGTGCATCATCACAGTGCTCACCTTATTGAGGCGCACACTGATGTTAAT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| 3UTR CAA 72 bp | ATGAATCTCTCCCTCAAGTGTCTTTATCAAGGCACTTaGTCACAGCAACAAGAAAAGAAACTAAGACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MNLSLKCLYQGT*SQQQEKKLRQL Trigger: CAGCTGTCTTAGTTTCTTTTCTTGTTGCTGTGACAAAGTGCCTTGATAAAGACACTTGAGGGAGAGATTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| CDS-3UTR GCA 90 bp | AAACAAAAGAGATTAGCAAGGTTTAGGGTTGGCTGCAATCCAATCCCCCTCTTTTTTTTCTTCATCTGCTaGTTTGTATTTCCCGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KQKRLARFRVGCNPIPLFFFFIC*FVFPGF Trigger: AAAACCGGGAAATACAAAGCAGCAGATGAAGAAAAA...AAAGAGGGGGATTGGATTGCAGCCAACCCTAAACCTTGCTAATCTCTTTTGTTT 39% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR CCA 90 bp | TATAGGAAGTCTATGGTTGCTTTGAACTTGTCAGAGCCTTTTGTATTAGTGGCTTCTCTTTGGTTGTATTaGTCACAAACCGAACCATCA | + |
|
Preference number: 4 (lower is better) Translates to: YRKSMVALNLSEPFVLVASLWLY*SQTEPS Trigger: TGATGGTTCGGTTTGTGACCAATACAACCAAAGAGA...AGCCACTAATACAAAAGGCTCTGACAAGTTCAAAGCAACCATAGACTTCCTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| 3UTR CAA 72 bp | TGCACTCTGTATAGGAAGTCTATGGTTGCTTTGAACTaGTCAGAGCCTTTTGTATTAGTGGCTTGTTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CTLYRKSMVALN*SEPFVLVACFH Trigger: ATGAAAACAAGCCACTAATACAAAAGGCTCTGACAAGTTCAAAGCAACCATAGACTTCCTATACAGAGTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
||
| CDS-3UTR GCA 90 bp | TATGTTAAATATGTTAAGGAAATACCTCTAACTAAGATTGCCATGGTTCTCCGGCCAGTAGGTCTTTCTTaGTCTCTTTGGTTGTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: YVKYVKEIPLTKIAMVLRPVGLS*SLWLYW Trigger: CCAATACAACCAAAGAGAGCAAGAAAGACCTACTGG...CCGGAGAACCATGGCAATCTTAGTTAGAGGTATTTCCTTAACATATTTAACATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097522.11 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS TCA 90 bp | TGCTCTGGTGCCAGTCCAATGACCACAGCGTTGGGGTCCTGGGTTTaGACTCCTGTGAACTCAGGCAGTGCGCGGTCATCAACCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: CSGASPMTTALGSWV*TPVNSGSARSSTRS Trigger: GCTCCTGGTTGATGACCGCGCACTGCCTGAGTTCACAGGAGTTCAAACCCAGGACCCCAACGCTGTGGTCATTGGACTGGCACCAGAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000026485.15 ENSMUST00000097521.12 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR CAA 90 bp | CACTTCCACCACGGAGGAGTGGAGAGCTACTGCTCCTCTGCGCCCACAGGAGCTTCTTGCTCTCTTTGGTaGTATTGGTCACAAACCGAA | + |
|
Preference number: 5 (lower is better) Translates to: HFHHGGVESYCSSAPTGASCSLW*YWSQTE Trigger: TTCGGTTTGTGACCAATACAACCAAAGAGAGCAAGA...AGCTCCTGTGGGCGCAGAGGAGCAGTAGCTCTCCACTCCTCCGTGGTGGAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR CAA 90 bp | CGGAGGAGTGGAGAGCTACTGCTCCTCTGCGCCCACAGGAGCTTCTCCTCCAGCTCTTTCTTGCTCTCTTaGGTTGTATTGGTCACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: RRSGELLLLCAHRSFSSSSFLLS*VVLVTN Trigger: GTTTGTGACCAATACAACCAAAGAGAGCAAGAAAGA...GCTGGAGGAGAAGCTCCTGTGGGCGCAGAGGAGCAGTAGCTCTCCACTCCTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS GCA 90 bp | GACATCATCCCTGCAATCGTCTCCTATCATGACGGCCTCCTCCGGTaGACAGTCAGCATCCCTCAAGGCTTCCAGAAAGAATGTCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: DIIPAIVSYHDGLLR*TVSIPQGFQKECLL Trigger: GAGAAGACATTCTTTCTGGAAGCCTTGAGGGATGCTGACTGTGCACCGGAGGAGGCCGTCATGATAGGAGACGATTGCAGGGATGATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR CAA 90 bp | CGCCACACTGCTGCTAGCTTGCTTCTCTGTGGCTTGTCTGCAGAGCTTCACGGCCTCTCTTTGGTTGTATaGGTCACAAACCGAACCATC | + |
|
Preference number: 5 (lower is better) Translates to: RHTAASLLLCGLSAELHGLSLVV*VTNRTI Trigger: GATGGTTCGGTTTGTGACCAATACAACCAAAGAGAG...GCCGTGAAGCTCTGCAGACAAGCCACAGAGAAGCAAGCTAGCAGCAGTGTGGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR CAA 90 bp | AGCACTGCCTGGCAACGGGGTGCAGGCCAGTCCTTTCCTGTGAGCTCAGGTCAGTCTTTCTTGCTCTCTTaGGTTGTATTGGTCACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: STAWQRGAGQSFPVSSGQSFLLS*VVLVTN Trigger: GTTTGTGACCAATACAACCAAAGAGAGCAAGAAAGA...CTGACCTGAGCTCACAGGAAAGGACTGGCCTGCACCCCGTTGCCAGGCAGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097521.12 |
||
| CDS-3UTR CAA 90 bp | CACGGAGGAGTGGAGAGCTACTGCTCCTCTGCGCCCACAGGAGCTTCTCCTCCATCTTTCTTGCTCTCTTaGGTTGTATTGGTCACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: HGGVESYCSSAPTGASPPSFLLS*VVLVTN Trigger: GTTTGTGACCAATACAACCAAAGAGAGCAAGAAAGA...TGGAGGAGAAGCTCCTGTGGGCGCAGAGGAGCAGTAGCTCTCCACTCCTCCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS GCA 90 bp | AGTGGCACGCAACCTTTTAAGAGCTTCCTGTGCGCCTGGCACAGCTaGATCTTCAATGTGAAGTGTGCCATTGAGATCCACCAAAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: SGTQPFKSFLCAWHS*IFNVKCAIEIHQNS Trigger: GCTGTTTTGGTGGATCTCAATGGCACACTTCACATTGAAGATGCAGCTGTGCCAGGCGCACAGGAAGCTCTTAAAAGGTTGCGTGCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000026485.15 ENSMUST00000097521.12 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS GCA 90 bp | TCTCCGGAATGCTTGGTTCAGAAGCTGATAATGAAAATGCTCTGGTaGCAGTCCAATGACCACAGCGTTGGGGTCCTGGGTTTGAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: SPECLVQKLIMKMLW*QSNDHSVGVLGLNS Trigger: GGAGTTCAAACCCAGGACCCCAACGCTGTGGTCATTGGACTGGCACCAGAGCATTTTCATTATCAGCTTCTGAACCAAGCATTCCGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097521.12 |
||
| CDS CCA 90 bp | AGAATGTCTTCTCTGGTTTCCCCACCACCATGGCTTTCGTGTCTGTaGCATACTCTAAGGCAGTCACAAATGGTCCTGGTCCCAAGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: RMSSLVSPPPWLSCL*HTLRQSQMVLVPRL Trigger: TAGCCTTGGGACCAGGACCATTTGTGACTGCCTTAGAGTATGCCACAGACACGAAAGCCATGGTGGTGGGGAAACCAGAGAAGACATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR CAA 90 bp | CAACTTCACTGGATCTCAGCTGAAGGGCTCGCCACACTGCTGCTAGCTTGCTTCTCTTGCTCTCTTTGGTaGTATTGGTCACAAACCGAA | + |
|
Preference number: 5 (lower is better) Translates to: QLHWISAEGLATLLLACFSCSLW*YWSQTE Trigger: TTCGGTTTGTGACCAATACAACCAAAGAGAGCAAGA...GAAGCAAGCTAGCAGCAGTGTGGCGAGCCCTTCAGCTGAGATCCAGTGAAGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS CCA 90 bp | TCAAGGCTTCCAGAAAGAATGTCTTCTCTGGTTTCCCCACCACCATaGCTTTCGTGTCTGTGGCATACTCTAAGGCAGTCACAAATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SRLPERMSSLVSPPP*LSCLWHTLRQSQMV Trigger: GACCATTTGTGACTGCCTTAGAGTATGCCACAGACACGAAAGCCATGGTGGTGGGGAAACCAGAGAAGACATTCTTTCTGGAAGCCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR CAA 90 bp | CTGTTAAAGCAACTTCACTGGATCTCAGCTGAAGGGCTCGCCACACTGCTGCTACTCTCTTTGGTTGTATaGGTCACAAACCGAACCATC | + |
|
Preference number: 5 (lower is better) Translates to: LLKQLHWISAEGLATLLLLSLVV*VTNRTI Trigger: GATGGTTCGGTTTGTGACCAATACAACCAAAGAGAG...TAGCAGCAGTGTGGCGAGCCCTTCAGCTGAGATCCAGTGAAGTTGCTTTAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS TCA 90 bp | TTGTATTTCCCGGTTTTAACTAAGATGCCCAGCATGCCAATGTTCTaGGCCCCATCGACATCATCCCTGCAATCGTCTCCTATCATGACG | + |
|
Preference number: 5 (lower is better) Translates to: LYFPVLTKMPSMPMF*APSTSSLQSSPIMT Trigger: CGTCATGATAGGAGACGATTGCAGGGATGATGTCGATGGGGCTCAGAACATTGGCATGCTGGGCATCTTAGTTAAAACCGGGAAATACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR CAA 90 bp | GCCTGTCATGCATGGGTGTCTCAAAGCAGCAACAACAAAAGTGACCCGTGTACACTCTCTTTGGTTGTATaGGTCACAAACCGAACCATC | + |
|
Preference number: 5 (lower is better) Translates to: ACHAWVSQSSNNKSDPCTLSLVV*VTNRTI Trigger: GATGGTTCGGTTTGTGACCAATACAACCAAAGAGAG...TGTACACGGGTCACTTTTGTTGTTGCTGCTTTGAGACACCCATGCATGACAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097521.12 |
||
| CDS-3UTR CAA 90 bp | TGCGCCCACAGGAGCTTCTCCTCCAGCCCAGTGAACCTGATGAATATTTTAACACTCTCTTTGGTTGTATaGGTCACAAACCGAACCATC | + |
|
Preference number: 5 (lower is better) Translates to: CAHRSFSSSPVNLMNILTLSLVV*VTNRTI Trigger: GATGGTTCGGTTTGTGACCAATACAACCAAAGAGAG...TGTTAAAATATTCATCAGGTTCACTGGGCTGGAGGAGAAGCTCCTGTGGGCGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
||
| CDS-3UTR CAA 90 bp | TTCACGGCTCAACTCTGGCATCTTGCTGACAGCCTAATGCACCTTCCAGTGCATTCTTGCTCTCTTTGGTaGTATTGGTCACAAACCGAA | + |
|
Preference number: 5 (lower is better) Translates to: FTAQLWHLADSLMHLPVHSCSLW*YWSQTE Trigger: TTCGGTTTGTGACCAATACAACCAAAGAGAGCAAGA...ATGCACTGGAAGGTGCATTAGGCTGTCAGCAAGATGCCAGAGTTGAGCCGTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| CDS-3UTR CAA 90 bp | CAGGAGCTTCTCCTCCAGCCCAGTGAACCTGATGAATATTTTAACAGGAATGGCCTCTCTTTGGTTGTATaGGTCACAAACCGAACCATC | + |
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Preference number: 5 (lower is better) Translates to: QELLLQPSEPDEYFNRNGLSLVV*VTNRTI Trigger: GATGGTTCGGTTTGTGACCAATACAACCAAAGAGAG...GCCATTCCTGTTAAAATATTCATCAGGTTCACTGGGCTGGAGGAGAAGCTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| CDS-3UTR CAA 90 bp | AATGCACCTTCCAGTGCATCTCTGTGTGAGTCAGTCATGCTCACAGAGGATCCTTCTTGCTCTCTTTGGTaGTATTGGTCACAAACCGAA | + |
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Preference number: 5 (lower is better) Translates to: NAPSSASLCESVMLTEDPSCSLW*YWSQTE Trigger: TTCGGTTTGTGACCAATACAACCAAAGAGAGCAAGA...AGGATCCTCTGTGAGCATGACTGACTCACACAGAGATGCACTGGAAGGTGCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| CDS-3UTR CAA 90 bp | AGGAGCTTCTCCTCCAGCCCAGTGAACCTGATGAATATTTTAACAGGAATGGCATCTTTCTTGCTCTCTTaGGTTGTATTGGTCACAAAC | + |
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Preference number: 5 (lower is better) Translates to: RSFSSSPVNLMNILTGMASFLLS*VVLVTN Trigger: GTTTGTGACCAATACAACCAAAGAGAGCAAGAAAGA...TGCCATTCCTGTTAAAATATTCATCAGGTTCACTGGGCTGGAGGAGAAGCTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| CDS-3UTR CAA 90 bp | ATACAGTGGAAGATCTGGCTTTCCACATCTGTTAAAGCAACTTCACTGGATCTCTCTTGCTCTCTTTGGTaGTATTGGTCACAAACCGAA | + |
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Preference number: 5 (lower is better) Translates to: IQWKIWLSTSVKATSLDLSCSLW*YWSQTE Trigger: TTCGGTTTGTGACCAATACAACCAAAGAGAGCAAGA...GAGATCCAGTGAAGTTGCTTTAACAGATGTGGAAAGCCAGATCTTCCACTGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| CDS-3UTR CAA 90 bp | AAATACAGGGATGTTTCCACCTTCCCCACCCTACAGGATACTGGAGTTTTAAAGTCTTTCTTGCTCTCTTaGGTTGTATTGGTCACAAAC | + |
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Preference number: 5 (lower is better) Translates to: KYRDVSTFPTLQDTGVLKSFLLS*VVLVTN Trigger: GTTTGTGACCAATACAACCAAAGAGAGCAAGAAAGA...CTTTAAAACTCCAGTATCCTGTAGGGTGGGGAAGGTGGAAACATCCCTGTATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097522.11 |
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| CDS-3UTR CAA 90 bp | CTGGGAATACAGTGGAAGATCTGGCTTTCCACATCTGTTAAAGCAACTTCACTGTCTTTCTTGCTCTCTTaGGTTGTATTGGTCACAAAC | + |
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Preference number: 5 (lower is better) Translates to: LGIQWKIWLSTSVKATSLSFLLS*VVLVTN Trigger: GTTTGTGACCAATACAACCAAAGAGAGCAAGAAAGA...CAGTGAAGTTGCTTTAACAGATGTGGAAAGCCAGATCTTCCACTGTATTCCCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| CDS-3UTR CAA 90 bp | ATTAGAGAAATAAACTCATTAAGAAGCTACCATGGAGACCACATGGACAGCCACTCTTGCTCTCTTTGGTaGTATTGGTCACAAACCGAA | + |
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Preference number: 5 (lower is better) Translates to: IREINSLRSYHGDHMDSHSCSLW*YWSQTE Trigger: TTCGGTTTGTGACCAATACAACCAAAGAGAGCAAGA...GTGGCTGTCCATGTGGTCTCCATGGTAGCTTCTTAATGAGTTTATTTCTCTAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097521.12 |
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| CDS GCA 72 bp | GGGGTCCTGGGTTTGAACTCCTGTGAACTCAGGCAGTaGGCGGTCATCAACCAGGAGCATGGGCCTGACTTG | + |
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Preference number: 6 (lower is better) Translates to: GVLGLNSCELRQ*AVINQEHGPDL Trigger: CAAGTCAGGCCCATGCTCCTGGTTGATGACCGCGCACTGCCTGAGTTCACAGGAGTTCAAACCCAGGACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000026485.15 ENSMUST00000097521.12 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| CDS CAA 90 bp | ATGCTCTGGTGCCAGTCCAATGACCACAGCGTTGGGGTCCTGGGTTaGAACTCCTGTGAACTCAGGCAGTGCGCGGTCATCAACCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: MLWCQSNDHSVGVLG*NSCELRQCAVINQE Trigger: CTCCTGGTTGATGACCGCGCACTGCCTGAGTTCACAGGAGTTCAAACCCAGGACCCCAACGCTGTGGTCATTGGACTGGCACCAGAGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000026485.15 ENSMUST00000097521.12 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| CDS TCA 72 bp | CAGGCAGTGCGCGGTCATCAACCAGGAGCATGGGCCTaGCTTGCTTCTGCTCGATTAAGTTTCGGGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: QAVRGHQPGAWA*LASARLSFGLL Trigger: CAGCAGCCCGAAACTTAATCGAGCAGAAGCAAGTCAGGCCCATGCTCCTGGTTGATGACCGCGCACTGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000026485.15 ENSMUST00000097521.12 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| CDS TCA 72 bp | CCCCATCGACATCATCCCTGCAATCGTCTCCTATCATaGCGGCCTCCTCCGGTGCACAGTCAGCATCCCTCA | + |
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Preference number: 6 (lower is better) Translates to: PHRHHPCNRLLS*RPPPVHSQHPS Trigger: TGAGGGATGCTGACTGTGCACCGGAGGAGGCCGTCATGATAGGAGACGATTGCAGGGATGATGTCGATGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| CDS GCA 72 bp | AGTGCGCGGTCATCAACCAGGAGCATGGGCCTGACTTaGTTCTGCTCGATTAAGTTTCGGGCTGCTGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: SARSSTRSMGLT*FCSIKFRAAVR Trigger: CCTGACAGCAGCCCGAAACTTAATCGAGCAGAAGCAAGTCAGGCCCATGCTCCTGGTTGATGACCGCGCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000026485.15 ENSMUST00000097521.12 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| CDS GCA 72 bp | CCTGCAATCGTCTCCTATCATGACGGCCTCCTCCGGTaGACAGTCAGCATCCCTCAAGGCTTCCAGAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: PAIVSYHDGLLR*TVSIPQGFQKE Trigger: TTCTTTCTGGAAGCCTTGAGGGATGCTGACTGTGCACCGGAGGAGGCCGTCATGATAGGAGACGATTGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| CDS CCA 72 bp | TCTCTGGTTTCCCCACCACCATGGCTTTCGTGTCTGTaGCATACTCTAAGGCAGTCACAAATGGTCCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: SLVSPPPWLSCL*HTLRQSQMVLV Trigger: GACCAGGACCATTTGTGACTGCCTTAGAGTATGCCACAGACACGAAAGCCATGGTGGTGGGGAAACCAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| CDS CCA 72 bp | AGCATCCCTCAAGGCTTCCAGAAAGAATGTCTTCTCTaGTTTCCCCACCACCATGGCTTTCGTGTCTGTGGC | + |
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Preference number: 6 (lower is better) Translates to: SIPQGFQKECLL*FPHHHGFRVCG Trigger: GCCACAGACACGAAAGCCATGGTGGTGGGGAAACCAGAGAAGACATTCTTTCTGGAAGCCTTGAGGGATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| CDS TCA 72 bp | CTGGCACAGCTGCATCTTCAATGTGAAGTGTGCCATTaGGATCCACCAAAACAGCTTTTAACGCACGGCGCG | + |
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Preference number: 6 (lower is better) Translates to: LAQLHLQCEVCH*DPPKQLLTHGA Trigger: CGCGCCGTGCGTTAAAAGCTGTTTTGGTGGATCTCAATGGCACACTTCACATTGAAGATGCAGCTGTGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000026485.15 ENSMUST00000097521.12 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| CDS TCA 72 bp | CCGGTTTTAACTAAGATGCCCAGCATGCCAATGTTCTaGGCCCCATCGACATCATCCCTGCAATCGTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: PVLTKMPSMPMF*APSTSSLQSSP Trigger: AGGAGACGATTGCAGGGATGATGTCGATGGGGCTCAGAACATTGGCATGCTGGGCATCTTAGTTAAAACCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| CDS TCA 72 bp | GCTTCCTGTGCGCCTGGCACAGCTGCATCTTCAATGTaGAGTGTGCCATTGAGATCCACCAAAACAGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: ASCAPGTAASSM*SVPLRSTKTAF Trigger: AAAAGCTGTTTTGGTGGATCTCAATGGCACACTTCACATTGAAGATGCAGCTGTGCCAGGCGCACAGGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000026485.15 ENSMUST00000097521.12 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| CDS GCA 72 bp | CAACCTTTTAAGAGCTTCCTGTGCGCCTGGCACAGCTaGATCTTCAATGTGAAGTGTGCCATTGAGATCCAC | + |
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Preference number: 6 (lower is better) Translates to: QPFKSFLCAWHS*IFNVKCAIEIH Trigger: GTGGATCTCAATGGCACACTTCACATTGAAGATGCAGCTGTGCCAGGCGCACAGGAAGCTCTTAAAAGGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000026485.15 ENSMUST00000097521.12 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| CDS CCA 72 bp | GAATGCTTGGTTCAGAAGCTGATAATGAAAATGCTCTaGTGCCAGTCCAATGACCACAGCGTTGGGGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: ECLVQKLIMKML*CQSNDHSVGVL Trigger: CAGGACCCCAACGCTGTGGTCATTGGACTGGCACCAGAGCATTTTCATTATCAGCTTCTGAACCAAGCATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000026485.15 ENSMUST00000097521.12 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| CDS CCA 72 bp | CCAGAAAGAATGTCTTCTCTGGTTTCCCCACCACCATaGCTTTCGTGTCTGTGGCATACTCTAAGGCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: PERMSSLVSPPP*LSCLWHTLRQS Trigger: TGACTGCCTTAGAGTATGCCACAGACACGAAAGCCATGGTGGTGGGGAAACCAGAGAAGACATTCTTTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026485.15 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| CDS CAA 72 bp | CTCTCCAGTAGGTCTTTCTTGCTCTCTTTGGTTGTATaGGTCACAAACCGAACCATCACAGAAGTGGCACGC | + |
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Preference number: 6 (lower is better) Translates to: LSSRSFLLSLVV*VTNRTITEVAR Trigger: GCGTGCCACTTCTGTGATGGTTCGGTTTGTGACCAATACAACCAAAGAGAGCAAGAAAGACCTACTGGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000026485.15 ENSMUST00000097521.12 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| CDS CAA 72 bp | TCAGTCTCTCCAGTAGGTCTTTCTTGCTCTCTTTGGTaGTATTGGTCACAAACCGAACCATCACAGAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: SVSPVGLSCSLW*YWSQTEPSQKW Trigger: CCACTTCTGTGATGGTTCGGTTTGTGACCAATACAACCAAAGAGAGCAAGAAAGACCTACTGGAGAGACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000026485.15 ENSMUST00000097521.12 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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| CDS CAA 90 bp | TTTTTCAGTCTCTCCAGTAGGTCTTTCTTGCTCTCTTTGGTTGTATaGGTCACAAACCGAACCATCACAGAAGTGGCACGCAACCTTTTA | + |
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Preference number: 6 (lower is better) Translates to: FFSLSSRSFLLSLVV*VTNRTITEVARNLL Trigger: TAAAAGGTTGCGTGCCACTTCTGTGATGGTTCGGTTTGTGACCAATACAACCAAAGAGAGCAAGAAAGACCTACTGGAGAGACTGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000026485.15 ENSMUST00000097521.12 ENSMUST00000097522.11 ENSMUST00000145634.9 ENSMUST00000148955.3 ENSMUST00000150990.9 |
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