Pregenerated sensors for HDGFL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025104Ensembl transcript IDs: ENSMUST00000026094.6, ENSMUST00000107305.8
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGGCAGGAGCAAGCCCAAAGGACAGTGATGTCCTGGAGGGAGGGGTaGGTAGACCAGTGCATCCAGAGCCCCACATCACCTCCATCTTCA | + |
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Preference number: 1 (lower is better) Translates to: RQEQAQRTVMSWREG*VDQCIQSPTSPPSS Trigger: TGAAGATGGAGGTGATGTGGGGCTCTGGATGCACTGGTCTACTCACCCCTCCCTCCAGGACATCACTGTCCTTTGGGCTTGCTCCTGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
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| 3UTR GCA 90 bp | CTAATGCTACCAAATGCTGCAAGACAGAGCAAGTGTCTTGCACCCTaGAGACCTGCACTCAGGAGGGTTAAGCTTGGGGCTATGGATCTG | + |
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Preference number: 1 (lower is better) Translates to: LMLPNAARQSKCLAP*RPALRRVKLGAMDL Trigger: CAGATCCATAGCCCCAAGCTTAACCCTCCTGAGTGCAGGTCTGCAGGGTGCAAGACACTTGCTCTGTCTTGCAGCATTTGGTAGCATTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
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| 3UTR CCA 90 bp | AGGCTTCTGCCAGAGTCCCCAGACTGTTCACAGCAGTGTCTCTTCTaGGCAGCTTCCAAAGTGCCCTTTATTCTCAAGGACTCTGTCTGT | + |
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Preference number: 1 (lower is better) Translates to: RLLPESPDCSQQCLF*AASKVPFILKDSVC Trigger: ACAGACAGAGTCCTTGAGAATAAAGGGCACTTTGGAAGCTGCCCAGAAGAGACACTGCTGTGAACAGTCTGGGGACTCTGGCAGAAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
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| 3UTR CCA 90 bp | TGTCTGCGGGCAGAACCTTCTCAGTGCCCGAGGAGAATCACAGTGTaGGTAAGCCACTTGTTGGTCCTTGTCAACACACATCAGGAATTT | + |
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Preference number: 1 (lower is better) Translates to: CLRAEPSQCPRRITV*VSHLLVLVNTHQEF Trigger: AAATTCCTGATGTGTGTTGACAAGGACCAACAAGTGGCTTACCCACACTGTGATTCTCCTCGGGCACTGAGAAGGTTCTGCCCGCAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
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| 3UTR TCA 90 bp | GCCAGCGCTCTGCGCTCAAGTGCTCAGCCTTCATGGGTCATTATGTaGAGACGAGGAGTGTACAAAGAAGAAATGCTATGGGAAATGCCT | + |
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Preference number: 1 (lower is better) Translates to: ASALRSSAQPSWVIM*RRGVYKEEMLWEMP Trigger: AGGCATTTCCCATAGCATTTCTTCTTTGTACACTCCTCGTCTTCACATAATGACCCATGAAGGCTGAGCACTTGAGCGCAGAGCGCTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
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| 3UTR TCA 90 bp | GTAGCACACGCCTTTAATCCTTGCACTTGGGATTCAGAGACAGGCTaGTCTTTTGAGTTCCAGGCTAGCCTGGTCTACAGAGTGAGTTCC | + |
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Preference number: 1 (lower is better) Translates to: VAHAFNPCTWDSETG*SFEFQASLVYRVSS Trigger: GGAACTCACTCTGTAGACCAGGCTAGCCTGGAACTCAAAAGATCAGCCTGTCTCTGAATCCCAAGTGCAAGGATTAAAGGCGTGTGCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
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| 3UTR GCA 90 bp | ACTGTAAGCAAGAGTCAATCCTTAGGCCAGCGCTCTGCGCTCAAGTaGTCAGCCTTCATGGGTCATTATGTGAAGACGAGGAGTGTACAA | + |
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Preference number: 1 (lower is better) Translates to: TVSKSQSLGQRSALK*SAFMGHYVKTRSVQ Trigger: TTGTACACTCCTCGTCTTCACATAATGACCCATGAAGGCTGAGCACTTGAGCGCAGAGCGCTGGCCTAAGGATTGACTCTTGCTTACAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
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| 3UTR GCA 90 bp | TCATTCCATCACTGTAAGCAAGAGTCAATCCTTAGGCCAGCGCTCTaGGCTCAAGTGCTCAGCCTTCATGGGTCATTATGTGAAGACGAG | + |
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Preference number: 1 (lower is better) Translates to: SFHHCKQESILRPAL*AQVLSLHGSLCEDE Trigger: CTCGTCTTCACATAATGACCCATGAAGGCTGAGCACTTGAGCGCAGAGCGCTGGCCTAAGGATTGACTCTTGCTTACAGTGATGGAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
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| 3UTR GCA 90 bp | AAAGTGCCCTTTATTCTCAAGGACTCTGTCTGTGTAGCCTTGAGATaGACTCATTTGCTGGGCCTTTGGCTTTGTGCCCTAGGGAGTGTG | + |
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Preference number: 1 (lower is better) Translates to: KVPFILKDSVCVALR*THLLGLWLCALGSV Trigger: CACACTCCCTAGGGCACAAAGCCAAAGGCCCAGCAAATGAGTGCATCTCAAGGCTACACAGACAGAGTCCTTGAGAATAAAGGGCACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
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| 3UTR GCA 90 bp | GCTGGTAAAGAAAGTCAGAACAAACTGCCTAATGCTACCAAATGCTaGAAGACAGAGCAAGTGTCTTGCACCCTGCAGACCTGCACTCAG | + |
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Preference number: 1 (lower is better) Translates to: AGKESQNKLPNATKC*KTEQVSCTLQTCTQ Trigger: CTGAGTGCAGGTCTGCAGGGTGCAAGACACTTGCTCTGTCTTGCAGCATTTGGTAGCATTAGGCAGTTTGTTCTGACTTTCTTTACCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
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| 3UTR GCA 90 bp | GTGGCTGGTAAAGAAAGTCAGAACAAACTGCCTAATGCTACCAAATaGTGCAAGACAGAGCAAGTGTCTTGCACCCTGCAGACCTGCACT | + |
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Preference number: 1 (lower is better) Translates to: VAGKESQNKLPNATK*CKTEQVSCTLQTCT Trigger: AGTGCAGGTCTGCAGGGTGCAAGACACTTGCTCTGTCTTGCAGCATTTGGTAGCATTAGGCAGTTTGTTCTGACTTTCTTTACCAGCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
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| 3UTR TCA 90 bp | GTATTAACTGCACTGTTCAGTGCAGAGAAGGGCCCACACAATCACTaGCCTTTCATACAGGTTTACCTATATAGGTACACCCAGCTGCTC | + |
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Preference number: 1 (lower is better) Translates to: VLTALFSAEKGPHNH*PFIQVYLYRYTQLL Trigger: GAGCAGCTGGGTGTACCTATATAGGTAAACCTGTATGAAAGGTCAGTGATTGTGTGGGCCCTTCTCTGCACTGAACAGTGCAGTTAATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
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| 3UTR CCA 90 bp | CAGTGCATCCAGAGCCCCACATCACCTCCATCTTCACAACGACACTaGGCTCTTAGGTCTTCTTCTATTTTCTCTTCACGTTCATTAGTT | + |
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Preference number: 1 (lower is better) Translates to: QCIQSPTSPPSSQRH*ALRSSSIFSSRSLV Trigger: AACTAATGAACGTGAAGAGAAAATAGAAGAAGACCTAAGAGCCCAGTGTCGTTGTGAAGATGGAGGTGATGTGGGGCTCTGGATGCACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
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| 3UTR GCA 90 bp | AGACGAGGAGTGTACAAAGAAGAAATGCTATGGGAAATGCCTATGTaGACAAATGACCGTTACCACACTATGAATGCGGACCTGCCTGTA | + |
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Preference number: 1 (lower is better) Translates to: RRGVYKEEMLWEMPM*TNDRYHTMNADLPV Trigger: TACAGGCAGGTCCGCATTCATAGTGTGGTAACGGTCATTTGTGCACATAGGCATTTCCCATAGCATTTCTTCTTTGTACACTCCTCGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
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| 3UTR GCA 90 bp | CTTCATGGGTCATTATGTGAAGACGAGGAGTGTACAAAGAAGAAATaGTATGGGAAATGCCTATGTGCACAAATGACCGTTACCACACTA | + |
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Preference number: 1 (lower is better) Translates to: LHGSLCEDEECTKKK*YGKCLCAQMTVTTL Trigger: TAGTGTGGTAACGGTCATTTGTGCACATAGGCATTTCCCATAGCATTTCTTCTTTGTACACTCCTCGTCTTCACATAATGACCCATGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
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| 3UTR GCA 90 bp | TGCACTATGGAAGGTTTACCTTTGCTATTCAAGTACTTATTTCTCTaGCCTCATATCATACCTGGACATGGCATTGCGATGCTTATACCA | + |
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Preference number: 1 (lower is better) Translates to: CTMEGLPLLFKYLFL*PHIIPGHGIAMLIP Trigger: TGGTATAAGCATCGCAATGCCATGTCCAGGTATGATATGAGGGCAGAGAAATAAGTACTTGAATAGCAAAGGTAAACCTTCCATAGTGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
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| 3UTR GCA 90 bp | CTTTATCCCCTCCATACAGGAATACTCACAAGAACACACTTGTTCTaGAGCATACATGTGAGTGAAACTAAGGGTAGTATCTGGGTATAT | + |
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Preference number: 1 (lower is better) Translates to: LYPLHTGILTRTHLF*SIHVSETKGSIWVY Trigger: ATATACCCAGATACTACCCTTAGTTTCACTCACATGTATGCTGCAGAACAAGTGTGTTCTTGTGAGTATTCCTGTATGGAGGGGATAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
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| 3UTR TCA 90 bp | AGGTATTTTGCCTTTAAGACAGGTTTTGAGGGCACATGGTCTGAATaGGACACTCAGAATTCATCATTAATCCAAGTGAACAGAGCTCAT | + |
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Preference number: 1 (lower is better) Translates to: RYFAFKTGFEGTWSE*DTQNSSLIQVNRAH Trigger: ATGAGCTCTGTTCACTTGGATTAATGATGAATTCTGAGTGTCTCATTCAGACCATGTGCCCTCAAAACCTGTCTTAAAGGCAAAATACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
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| 3UTR CCA 90 bp | GCTATTCAAGTACTTATTTCTCTGCCCTCATATCATACCTGGACATaGCATTGCGATGCTTATACCAAGAATCTCCTGTTAAGTTTGTGT | + |
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Preference number: 1 (lower is better) Translates to: AIQVLISLPSYHTWT*HCDAYTKNLLLSLC Trigger: ACACAAACTTAACAGGAGATTCTTGGTATAAGCATCGCAATGCCATGTCCAGGTATGATATGAGGGCAGAGAAATAAGTACTTGAATAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
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| 3UTR CCA 90 bp | ACCTTTGCTATTCAAGTACTTATTTCTCTGCCCTCATATCATACCTaGACATGGCATTGCGATGCTTATACCAAGAATCTCCTGTTAAGT | + |
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Preference number: 1 (lower is better) Translates to: TFAIQVLISLPSYHT*TWHCDAYTKNLLLS Trigger: ACTTAACAGGAGATTCTTGGTATAAGCATCGCAATGCCATGTCCAGGTATGATATGAGGGCAGAGAAATAAGTACTTGAATAGCAAAGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
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| 3UTR GCA 90 bp | CAAGTACTTATTTCTCTGCCCTCATATCATACCTGGACATGGCATTaGGATGCTTATACCAAGAATCTCCTGTTAAGTTTGTGTAAACAT | + |
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Preference number: 1 (lower is better) Translates to: QVLISLPSYHTWTWH*DAYTKNLLLSLCKH Trigger: ATGTTTACACAAACTTAACAGGAGATTCTTGGTATAAGCATCGCAATGCCATGTCCAGGTATGATATGAGGGCAGAGAAATAAGTACTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
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| 3UTR-3UTR CCA 90 bp | AGCCTGAGCTACACGGTGAGGCAGACAGCGGTATACACACAGCAAGACCTTGTCTGTAGCCAGGCGTGGTaGTGCACGCCTTTAATCCCA | + |
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Preference number: 2 (lower is better) Translates to: SLSYTVRQTAVYTQQDLVCSQAW*CTPLIP Trigger: TGGGATTAAAGGCGTGCACCACCACGCCTGGCTACA...GACAAGGTCTTGCTGTGTGTATACCGCTGTCTGCCTCACCGTGTAGCTCAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
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| 3UTR-3UTR TCA 90 bp | CCTCAGCTCTTGGCCTACCGTTGTACCTACAATCCCGAGTTCTTCCTAAGAACTTCCTGGAGGGAGGGGTaGGTAGACCAGTGCATCCAG | + |
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Preference number: 2 (lower is better) Translates to: PQLLAYRCTYNPEFFLRTSWREG*VDQCIQ Trigger: CTGGATGCACTGGTCTACTCACCCCTCCCTCCAGGA...AGTTCTTAGGAAGAACTCGGGATTGTAGGTACAACGGTAGGCCAAGAGCTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
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| 3UTR CAA 90 bp | TTTATTCTCAAGGACTCTGTCTGTGTAGCCTTGAGATGCACTCATTaGCTGGGCCTTTGGCTTTGTGCCCTAGGGAGTGTGTCTGCGGGC | + |
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Preference number: 2 (lower is better) Translates to: FILKDSVCVALRCTH*LGLWLCALGSVSAG Trigger: GCCCGCAGACACACTCCCTAGGGCACAAAGCCAAAGGCCCAGCAAATGAGTGCATCTCAAGGCTACACAGACAGAGTCCTTGAGAATAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTTTATCCCCTCCATACAGGAATACTCACAAGAACACACTTGTTCTGCAGCAGCAGACAGCCCCTGCTaGTGCAGCTCCTGCTGTTGC | + |
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Preference number: 2 (lower is better) Translates to: SFIPSIQEYSQEHTCSAAADSPC*CSSCCC Trigger: GCAACAGCAGGAGCTGCAGCAGCAGGGGCTGTCTGC...TGCTGCAGAACAAGTGTGTTCTTGTGAGTATTCCTGTATGGAGGGGATAAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
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| 3UTR CAA 90 bp | GCTTCCAAAGTGCCCTTTATTCTCAAGGACTCTGTCTGTGTAGCCTaGAGATGCACTCATTTGCTGGGCCTTTGGCTTTGTGCCCTAGGG | + |
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Preference number: 2 (lower is better) Translates to: ASKVPFILKDSVCVA*RCTHLLGLWLCALG Trigger: CCCTAGGGCACAAAGCCAAAGGCCCAGCAAATGAGTGCATCTCAAGGCTACACAGACAGAGTCCTTGAGAATAAAGGGCACTTTGGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
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| 3UTR-3UTR TCA 90 bp | AAATTCCTAAACATGCTCTTTTCTTTGCCAAGGTCACATCAAATGCCAAGTAGCAAATGCAGGGTCCCCTaGGCTGGGCTGTCGCAGACG | + |
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Preference number: 2 (lower is better) Translates to: KFLNMLFSLPRSHQMPSSKCRVP*AGLSQT Trigger: CGTCTGCGACAGCCCAGCTCAGGGGACCCTGCATTT...GCTACTTGGCATTTGATGTGACCTTGGCAAAGAAAAGAGCATGTTTAGGAATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
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| 3UTR-3UTR GCA 90 bp | AGACAGCGGTATACACACAGCAAGACCTTGTCTCAAATACTGAGAGGAGGGATGGCATCTAGCCAGTCATaGAGGCTTTGTGAATGGGCA | + |
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Preference number: 2 (lower is better) Translates to: RQRYTHSKTLSQILRGGMASSQS*RLCEWA Trigger: TGCCCATTCACAAAGCCTGCATGACTGGCTAGATGC...CATCCCTCCTCTCAGTATTTGAGACAAGGTCTTGCTGTGTGTATACCGCTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
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| 3UTR-3UTR GCA 90 bp | AGCCTGAGCTACACGGTGAGGCAGACAGCGGTATACACACAGCAAGACCTTGTCAAGTACTTATTTCTCTaGCCTCATATCATACCTGGA | + |
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Preference number: 2 (lower is better) Translates to: SLSYTVRQTAVYTQQDLVKYLFL*PHIIPG Trigger: TCCAGGTATGATATGAGGGCAGAGAAATAAGTACTT...GACAAGGTCTTGCTGTGTGTATACCGCTGTCTGCCTCACCGTGTAGCTCAGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
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| 3UTR-3UTR GCA 90 bp | GTTTTGTGCACTATGGAAGGTTTACCTTTGCTATTCAAGTACTTATTTCTCTGCCTAGGGTGGGACATTTaGAGCGAAGAGGGGCGGGGA | + |
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Preference number: 2 (lower is better) Translates to: VLCTMEGLPLLFKYLFLCLGWDI*SEEGRG Trigger: TCCCCGCCCCTCTTCGCTGCAAATGTCCCACCCTAG...GCAGAGAAATAAGTACTTGAATAGCAAAGGTAAACCTTCCATAGTGCACAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
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| 3UTR-3UTR GCA 90 bp | CTACACGGTGAGGCAGACAGCGGTATACACACAGCAAGACCTTGTCTCAAATACGGACCTGCCTGTAAATaGCTAAGTCAAGAGCATTTA | + |
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Preference number: 2 (lower is better) Translates to: LHGEADSGIHTARPCLKYGPACK*LSQEHL Trigger: TAAATGCTCTTGACTTAGGCATTTACAGGCAGGTCC...GTATTTGAGACAAGGTCTTGCTGTGTGTATACCGCTGTCTGCCTCACCGTGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
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| 3UTR-3UTR GCA 90 bp | AGACAGCGGTATACACACAGCAAGACCTTGTCTCAAATACTGAGAGGAGGGATGTGGGAAATGCCTATGTaGACAAATGACCGTTACCAC | + |
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Preference number: 2 (lower is better) Translates to: RQRYTHSKTLSQILRGGMWEMPM*TNDRYH Trigger: GTGGTAACGGTCATTTGTGCACATAGGCATTTCCCA...CATCCCTCCTCTCAGTATTTGAGACAAGGTCTTGCTGTGTGTATACCGCTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
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| 3UTR CAA 90 bp | AGCAAGACCTTGTCTCAAATACTGAGAGGAGGGATGAGGAGGATGTaGAGGAAGGTTAACCTGAGTGACAGGAGTAAGACAACACTGAAA | + |
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Preference number: 2 (lower is better) Translates to: SKTLSQILRGGMRRM*RKVNLSDRSKTTLK Trigger: TTTCAGTGTTGTCTTACTCCTGTCACTCAGGTTAACCTTCCTCAACATCCTCCTCATCCCTCCTCTCAGTATTTGAGACAAGGTCTTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
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| 3UTR-3UTR TCA 90 bp | AGACAGCGGTATACACACAGCAAGACCTTGTCTCAAATACTGAGAGGAGGGATGGAAATGACGGAGAAATaGGATGAAAGAAGACAGAGC | + |
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Preference number: 2 (lower is better) Translates to: RQRYTHSKTLSQILRGGMEMTEK*DERRQS Trigger: GCTCTGTCTTCTTTCATCTCATTTCTCCGTCATTTC...CATCCCTCCTCTCAGTATTTGAGACAAGGTCTTGCTGTGTGTATACCGCTGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
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| 3UTR-3UTR TCA 90 bp | AGACACTCAGAATTCATCATTAATCCAAGTGAACAGAGCTCATCCTTACTGTTTAAGCCCAAAGGACAGTaGTGTCCTGGAGGGAGGGGT | + |
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Preference number: 2 (lower is better) Translates to: RHSEFIINPSEQSSSLLFKPKGQ*CPGGRG Trigger: ACCCCTCCCTCCAGGACATCACTGTCCTTTGGGCTT...AAACAGTAAGGATGAGCTCTGTTCACTTGGATTAATGATGAATTCTGAGTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
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| 3UTR-3UTR TCA 90 bp | TCCTTTATCCCCTCCATACAGGAATACTCACAAGAACACACTTGTTCTGCAGCAGATTCAGAGACAGGCTaGTCTTTTGAGTTCCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: SFIPSIQEYSQEHTCSAADSETG*SFEFQA Trigger: AGCCTGGAACTCAAAAGATCAGCCTGTCTCTGAATC...TGCTGCAGAACAAGTGTGTTCTTGTGAGTATTCCTGTATGGAGGGGATAAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
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| 3UTR-3UTR GCA 90 bp | AATGTACCTGGTGGGCATCACCATTCACCCACTCATTCCATCACTGTAAGCAAGACCTGGACATGGCATTaGGATGCTTATACCAAGAAT | + |
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Preference number: 2 (lower is better) Translates to: NVPGGHHHSPTHSITVSKTWTWH*DAYTKN Trigger: ATTCTTGGTATAAGCATCGCAATGCCATGTCCAGGT...CTTGCTTACAGTGATGGAATGAGTGGGTGAATGGTGATGCCCACCAGGTACATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
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| 3UTR-3UTR GCA 90 bp | GGTACACCCAGCTGCTCATGTTACTTATTCTTGGGAATTGTGGGTAGTATTTTTGCAGAACCTTCTCAGTaGCCGAGGAGAATCACAGTG | + |
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Preference number: 2 (lower is better) Translates to: GTPSCSCYLFLGIVGSIFAEPSQ*PRRITV Trigger: CACTGTGATTCTCCTCGGGCACTGAGAAGGTTCTGC...AAAAATACTACCCACAATTCCCAAGAATAAGTAACATGAGCAGCTGGGTGTACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCTTCATGGGTCATTATGTGAAGACGAGGAGTGTACAAAGAAGAAATGCTATGGAGAGAGACTAGGGTaGGACATTTGCAGCGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: SLHGSLCEDEECTKKKCYGERLG*DICSEE Trigger: CTCTTCGCTGCAAATGTCCCACCCTAGTCTCTCTCC...ATAGCATTTCTTCTTTGTACACTCCTCGTCTTCACATAATGACCCATGAAGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
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| 3UTR CAA 90 bp | CCTTCTCAGTGCCCGAGGAGAATCACAGTGTGGGTAAGCCACTTGTaGGTCCTTGTCAACACACATCAGGAATTTAATTTTTATTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: PSQCPRRITVWVSHL*VLVNTHQEFNFYFQ Trigger: CTGGAAATAAAAATTAAATTCCTGATGTGTGTTGACAAGGACCAACAAGTGGCTTACCCACACTGTGATTCTCCTCGGGCACTGAGAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
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| 3UTR-3UTR TCA 90 bp | GGTACACCCAGCTGCTCATGTTACTTATTCTTGGGAATTGTGGGTAGTATTTTTCTGGGGCTCTGTCAATaGCAACAAAGACCGTTGGTT | + |
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Preference number: 2 (lower is better) Translates to: GTPSCSCYLFLGIVGSIFLGLCQ*QQRPLV Trigger: AACCAACGGTCTTTGTTGTCATTGACAGAGCCCCAG...AAAAATACTACCCACAATTCCCAAGAATAAGTAACATGAGCAGCTGGGTGTACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
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| 3UTR-3UTR TCA 90 bp | AGAACACACTCTCTAGTGATTCACTGTTACTTCTGTCTCTTTAGATTGCAGGATACATGTGATGGTCTCTaGGCTCTGGCATCCAGTGGT | + |
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Preference number: 2 (lower is better) Translates to: RTHSLVIHCYFCLFRLQDTCDGL*ALASSG Trigger: ACCACTGGATGCCAGAGCTCAGAGACCATCACATGT...ATCCTGCAATCTAAAGAGACAGAAGTAACAGTGAATCACTAGAGAGTGTGTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
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| 3UTR-3UTR GCA 90 bp | GGTACACCCAGCTGCTCATGTTACTTATTCTTGGGAATTGTGGGTAGTATTTTTTTCCATACATGGAACTaGGTGAGCACAACAGGGGAC | + |
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Preference number: 2 (lower is better) Translates to: GTPSCSCYLFLGIVGSIFFHTWN*VSTTGD Trigger: GTCCCCTGTTGTGCTCACGCAGTTCCATGTATGGAA...AAAAATACTACCCACAATTCCCAAGAATAAGTAACATGAGCAGCTGGGTGTACC 44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
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| 3UTR-3UTR CCA 90 bp | AGAACACACTCTCTAGTGATTCACTGTTACTTCTGTCTCTTTAGATTGCAGGATATGGTCTCTGAGCTCTaGCATCCAGTGGTTGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: RTHSLVIHCYFCLFRLQDMVSEL*HPVVGL Trigger: CAGACCAACCACTGGATGCCAGAGCTCAGAGACCAT...ATCCTGCAATCTAAAGAGACAGAAGTAACAGTGAATCACTAGAGAGTGTGTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
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| 3UTR CAA 90 bp | GAACCTTCTCAGTGCCCGAGGAGAATCACAGTGTGGGTAAGCCACTaGTTGGTCCTTGTCAACACACATCAGGAATTTAATTTTTATTTC | + |
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Preference number: 2 (lower is better) Translates to: EPSQCPRRITVWVSH*LVLVNTHQEFNFYF Trigger: GAAATAAAAATTAAATTCCTGATGTGTGTTGACAAGGACCAACAAGTGGCTTACCCACACTGTGATTCTCCTCGGGCACTGAGAAGGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
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| 3UTR-3UTR TCA 90 bp | ACCAAGAATCTCCTGTTAAGTTTGTGTAAACATTCTTACCATTATTCTCTGCCGGTCATGCAGGCTTTGTaGATGGGCAAGCTGACTGAC | + |
|
Preference number: 2 (lower is better) Translates to: TKNLLLSLCKHSYHYSLPVMQAL*MGKLTD Trigger: GTCAGTCAGCTTGCCCATTCACAAAGCCTGCATGAC...CGGCAGAGAATAATGGTAAGAATGTTTACACAAACTTAACAGGAGATTCTTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| 3UTR-3UTR TCA 90 bp | AGACAGCGGTATACACACAGCAAGACCTTGTCTCAAATACTGAGAGGAGGGATGCTTATCTCTTCTGTGTaGTTATTGGGGAATAGCATA | + |
|
Preference number: 2 (lower is better) Translates to: RQRYTHSKTLSQILRGGMLISSV*LLGNSI Trigger: TATGCTATTCCCCAATAATCACACAGAAGAGATAAG...CATCCCTCCTCTCAGTATTTGAGACAAGGTCTTGCTGTGTGTATACCGCTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| 3UTR-3UTR TCA 90 bp | CCTCCATACAGGAATACTCACAAGAACACACTTGTTCTGCAGCATACATGTGAGGAATTACTGTTTAGCTaGGTATCTGATGATGGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: PPYRNTHKNTLVLQHTCEELLFS*VSDDGG Trigger: CCCACCATCATCAGATACTCAGCTAAACAGTAATTC...CTCACATGTATGCTGCAGAACAAGTGTGTTCTTGTGAGTATTCCTGTATGGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR-3UTR GCA 90 bp | AATGTACCTGGTGGGCATCACCATTCACCCACTCATTCCATCACTGTAAGCAAGAGGCAATCATTTAATTaGTCAGTGATTGAAACAAGC | + |
|
Preference number: 2 (lower is better) Translates to: NVPGGHHHSPTHSITVSKRQSFN*SVIETS Trigger: GCTTGTTTCAATCACTGAGCAATTAAATGATTGCCT...CTTGCTTACAGTGATGGAATGAGTGGGTGAATGGTGATGCCCACCAGGTACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| 3UTR-3UTR CCA 90 bp | AGAACACACTCTCTAGTGATTCACTGTTACTTCTGTCTCTTTAGATTGCAGGATACACCAAAAGCAAACTaGATGCACGGAAGGCTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: RTHSLVIHCYFCLFRLQDTPKAN*MHGRLC Trigger: ACACAGCCTTCCGTGCATCCAGTTTGCTTTTGGTGT...ATCCTGCAATCTAAAGAGACAGAAGTAACAGTGAATCACTAGAGAGTGTGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR-3UTR TCA 90 bp | GGTACACCCAGCTGCTCATGTTACTTATTCTTGGGAATTGTGGGTAGTATTTTTGAACAGAGAGGAATGTaGCTAATGCACACACATACT | + |
|
Preference number: 2 (lower is better) Translates to: GTPSCSCYLFLGIVGSIFEQRGM*LMHTHT Trigger: AGTATGTGTGTGCATTAGTCACATTCCTCTCTGTTC...AAAAATACTACCCACAATTCCCAAGAATAAGTAACATGAGCAGCTGGGTGTACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTCCATACAGGAATACTCACAAGAACACACTTGTTCTGCAGCATACATGTGAGATTCAAAACAGCAATTaGAGGTTGGAGAAATGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: PPYRNTHKNTLVLQHTCEIQNSN*RLEKWL Trigger: AAGCCATTTCTCCAACCTGCAATTGCTGTTTTGAAT...CTCACATGTATGCTGCAGAACAAGTGTGTTCTTGTGAGTATTCCTGTATGGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR-3UTR CCA 90 bp | ACCAAGAATCTCCTGTTAAGTTTGTGTAAACATTCTTACCATTATTCTCTGCCGGGTACACTTTCCACATaGCTCTCTTTCGTCCTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: TKNLLLSLCKHSYHYSLPGTLST*LSFVLR Trigger: TCTCAGGACGAAAGAGAGCCATGTGGAAAGTGTACC...CGGCAGAGAATAATGGTAAGAATGTTTACACAAACTTAACAGGAGATTCTTGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| 3UTR-3UTR CCA 90 bp | ACTTGGAAAAGGAGCCTAGACACAGAGAAGTCTGCAAAATCTTCATCATTCTTACAGTTAACCTTCTTGTaGTGTCTCTCAATATGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: TWKRSLDTEKSAKSSSFLQLTFL*CLSICS Trigger: GCTGCATATTGAGAGACACCACAAGAAGGTTAACTG...TAAGAATGATGAAGATTTTGCAGACTTCTCTGTGTCTAGGCTCCTTTTCCAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTACACCCAGCTGCTCATGTTACTTATTCTTGGGAATTGTGGGTAGTATTTTTCTAGGAGTTGGTTCTTaGGTTCTGCTACAAAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: GTPSCSCYLFLGIVGSIFLGVGS*VLLQRK Trigger: TTTTCTTTGTAGCAGAACCCAAGAACCAACTCCTAG...AAAAATACTACCCACAATTCCCAAGAATAAGTAACATGAGCAGCTGGGTGTACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR-3UTR CCA 90 bp | GCCTGTGTATATATTTGCCATTTTATAATCATATTGCTATCCACAGCCAAGCTATTCTTCCTCAGCTCTTaGCCTACCGTTGTACCTACA | + |
|
Preference number: 2 (lower is better) Translates to: ACVYICHFIIILLSTAKLFFLSS*PTVVPT Trigger: TGTAGGTACAACGGTAGGCCAAGAGCTGAGGAAGAA...TAGCTTGGCTGTGGATAGCAATATGATTATAAAATGGCAAATATATACACAGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR-3UTR TCA 90 bp | AGACACTCAGAATTCATCATTAATCCAAGTGAACAGAGCTCATCCTTACTGTTTTCTGCAGCATACATGTaGGTGAAACTAAGGGTAGTA | + |
|
Preference number: 2 (lower is better) Translates to: RHSEFIINPSEQSSSLLFSAAYM*VKLRVV Trigger: TACTACCCTTAGTTTCACTCACATGTATGCTGCAGA...AAACAGTAAGGATGAGCTCTGTTCACTTGGATTAATGATGAATTCTGAGTGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR-3UTR GCA 90 bp | AAATTCCTAAACATGCTCTTTTCTTTGCCAAGGTCACATCAAATGCCAAGTAGCTTGGTTCTTGGGTTCTaGTACAAAGAAAATCCCATC | + |
|
Preference number: 2 (lower is better) Translates to: KFLNMLFSLPRSHQMPSSLVLGF*YKENPI Trigger: GATGGGATTTTCTTTGTAGCAGAACCCAAGAACCAA...GCTACTTGGCATTTGATGTGACCTTGGCAAAGAAAAGAGCATGTTTAGGAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR-3UTR CCA 90 bp | AAATTCCTAAACATGCTCTTTTCTTTGCCAAGGTCACATCAAATGCCAAGTAGCTGCAGGTTGGAGAAATaGCTTCATATGAAATGTATG | + |
|
Preference number: 2 (lower is better) Translates to: KFLNMLFSLPRSHQMPSSCRLEK*LHMKCM Trigger: CATACATTTCATATGAAGCCATTTCTCCAACCTGCA...GCTACTTGGCATTTGATGTGACCTTGGCAAAGAAAAGAGCATGTTTAGGAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR CAA 90 bp | AGAACACACTCTCTAGTGATTCACTGTTACTTCTGTCTCTTTAGATaGCAGGATCCTTTATCGTCTCACTTTGATCATAGTATACTGATA | + |
|
Preference number: 2 (lower is better) Translates to: RTHSLVIHCYFCLFR*QDPLSSHFDHSILI Trigger: TATCAGTATACTATGATCAAAGTGAGACGATAAAGGATCCTGCAATCTAAAGAGACAGAAGTAACAGTGAATCACTAGAGAGTGTGTTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR-3UTR GCA 90 bp | GCCTGTGTATATATTTGCCATTTTATAATCATATTGCTATCCACAGCCAAGCTAAGAACACACTTGTTCTaGAGCATACATGTGAGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: ACVYICHFIIILLSTAKLRTHLF*SIHVSE Trigger: TTCACTCACATGTATGCTGCAGAACAAGTGTGTTCT...TAGCTTGGCTGTGGATAGCAATATGATTATAAAATGGCAAATATATACACAGGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR-3UTR CCA 90 bp | AAATTCCTAAACATGCTCTTTTCTTTGCCAAGGTCACATCAAATGCCAAGTAGCGACAACAAAGACCGTTaGTTCATATCAAATCCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: KFLNMLFSLPRSHQMPSSDNKDR*FISNPN Trigger: ATTTGGATTTGATATGAACCAACGGTCTTTGTTGTC...GCTACTTGGCATTTGATGTGACCTTGGCAAAGAAAAGAGCATGTTTAGGAATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR GCA 72 bp | AATGTCTGGGCAGGAGAGAGACTAGGGTGGGACATTTaGAGCGAAGAGGGGCGGGGAGAGGAGACCAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: NVWAGERLGWDI*SEEGRGEETSS Trigger: GCTGCTGGTCTCCTCTCCCCGCCCCTCTTCGCTGCAAATGTCCCACCCTAGTCTCTCTCCTGCCCAGACATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| 3UTR GCA 72 bp | GCTGGGCCTTTGGCTTTGTGCCCTAGGGAGTGTGTCTaGGGGCAGAACCTTCTCAGTGCCCGAGGAGAATCA | + |
|
Preference number: 3 (lower is better) Translates to: AGPLALCPRECV*GQNLLSARGES Trigger: TGATTCTCCTCGGGCACTGAGAAGGTTCTGCCCGCAGACACACTCCCTAGGGCACAAAGCCAAAGGCCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR TCA 72 bp | CAAGCCCAAAGGACAGTGATGTCCTGGAGGGAGGGGTaGGTAGACCAGTGCATCCAGAGCCCCACATCACCT | + |
|
Preference number: 3 (lower is better) Translates to: QAQRTVMSWREG*VDQCIQSPTSP Trigger: AGGTGATGTGGGGCTCTGGATGCACTGGTCTACTCACCCCTCCCTCCAGGACATCACTGTCCTTTGGGCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR TCA 72 bp | GCCAGTCATGCAGGCTTTGTGAATGGGCAAGCTGACTaGCCGGCCCCTAACATTAGGCCATGGACACTGATC | + |
|
Preference number: 3 (lower is better) Translates to: ASHAGFVNGQAD*PAPNIRPWTLI Trigger: GATCAGTGTCCATGGCCTAATGTTAGGGGCCGGTCAGTCAGCTTGCCCATTCACAAAGCCTGCATGACTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| 3UTR GCA 72 bp | CCAAATGCTGCAAGACAGAGCAAGTGTCTTGCACCCTaGAGACCTGCACTCAGGAGGGTTAAGCTTGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PNAARQSKCLAP*RPALRRVKLGA Trigger: AGCCCCAAGCTTAACCCTCCTGAGTGCAGGTCTGCAGGGTGCAAGACACTTGCTCTGTCTTGCAGCATTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| 3UTR CCA 72 bp | TGTGTAGCCTTGAGATGCACTCATTTGCTGGGCCTTTaGCTTTGTGCCCTAGGGAGTGTGTCTGCGGGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: CVALRCTHLLGL*LCALGSVSAGR Trigger: TCTGCCCGCAGACACACTCCCTAGGGCACAAAGCCAAAGGCCCAGCAAATGAGTGCATCTCAAGGCTACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR GCA 72 bp | CACTGTAAGCAAGAGTCAATCCTTAGGCCAGCGCTCTaGGCTCAAGTGCTCAGCCTTCATGGGTCATTATGT | + |
|
Preference number: 3 (lower is better) Translates to: HCKQESILRPAL*AQVLSLHGSLC Trigger: ACATAATGACCCATGAAGGCTGAGCACTTGAGCGCAGAGCGCTGGCCTAAGGATTGACTCTTGCTTACAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| 3UTR CCA 72 bp | GATCTGTGGCCTTTTAAGGAAGTGTACCTAGACAGATaGAAGGAAGGGTTCTGGGAGCCTGAGGGAAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: DLWPFKEVYLDR*KEGFWEPEGSR Trigger: TCTGCTTCCCTCAGGCTCCCAGAACCCTTCCTTCCATCTGTCTAGGTACACTTCCTTAAAAGGCCACAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| 3UTR CCA 72 bp | GCAGAACCTTCTCAGTGCCCGAGGAGAATCACAGTGTaGGTAAGCCACTTGTTGGTCCTTGTCAACACACAT | + |
|
Preference number: 3 (lower is better) Translates to: AEPSQCPRRITV*VSHLLVLVNTH Trigger: ATGTGTGTTGACAAGGACCAACAAGTGGCTTACCCACACTGTGATTCTCCTCGGGCACTGAGAAGGTTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTCAGCTCTTGGCCTACCGTTGTACCTACAATCCCGAGTTCTTCCTAAGAACTCAGGAAGCTGATGACTaGGAAAAGGAGCCTAGACAC | + |
|
Preference number: 3 (lower is better) Translates to: PQLLAYRCTYNPEFFLRTQEADD*EKEPRH Trigger: GTGTCTAGGCTCCTTTTCCAAGTCATCAGCTTCCTG...AGTTCTTAGGAAGAACTCGGGATTGTAGGTACAACGGTAGGCCAAGAGCTGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTCAGCTCTTGGCCTACCGTTGTACCTACAATCCCGAGTTCTTCCTAAGAACTTCAAGAGTCAATGCTTaGTTTCCCACAGTGCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: PQLLAYRCTYNPEFFLRTSRVNA*FPTVLL Trigger: CAGGAGCACTGTGGGAAACAAAGCATTGACTCTTGA...AGTTCTTAGGAAGAACTCGGGATTGTAGGTACAACGGTAGGCCAAGAGCTGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR GCA 72 bp | GAAAGTCAGAACAAACTGCCTAATGCTACCAAATGCTaGAAGACAGAGCAAGTGTCTTGCACCCTGCAGACC | + |
|
Preference number: 3 (lower is better) Translates to: ESQNKLPNATKC*KTEQVSCTLQT Trigger: GGTCTGCAGGGTGCAAGACACTTGCTCTGTCTTGCAGCATTTGGTAGCATTAGGCAGTTTGTTCTGACTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| 3UTR CCA 72 bp | CAGAGCCCCACATCACCTCCATCTTCACAACGACACTaGGCTCTTAGGTCTTCTTCTATTTTCTCTTCACGT | + |
|
Preference number: 3 (lower is better) Translates to: QSPTSPPSSQRH*ALRSSSIFSSR Trigger: ACGTGAAGAGAAAATAGAAGAAGACCTAAGAGCCCAGTGTCGTTGTGAAGATGGAGGTGATGTGGGGCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTACACCCAGCTGCTCATGTTACTTATTCTTGGGAATTGTGGGTAGTATTTTTTCATTTGCTGGGCCTTaGGCTTTGTGCCCTAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: GTPSCSCYLFLGIVGSIFSFAGP*ALCPRE Trigger: CTCCCTAGGGCACAAAGCCAAAGGCCCAGCAAATGA...AAAAATACTACCCACAATTCCCAAGAATAAGTAACATGAGCAGCTGGGTGTACC 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR TCA 72 bp | GCACTGTTCAGTGCAGAGAAGGGCCCACACAATCACTaGCCTTTCATACAGGTTTACCTATATAGGTACACC | + |
|
Preference number: 3 (lower is better) Translates to: ALFSAEKGPHNH*PFIQVYLYRYT Trigger: GGTGTACCTATATAGGTAAACCTGTATGAAAGGTCAGTGATTGTGTGGGCCCTTCTCTGCACTGAACAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR GCA 72 bp | TTTATTCTCAAGGACTCTGTCTGTGTAGCCTTGAGATaGACTCATTTGCTGGGCCTTTGGCTTTGTGCCCTA | + |
|
Preference number: 3 (lower is better) Translates to: FILKDSVCVALR*THLLGLWLCAL Trigger: TAGGGCACAAAGCCAAAGGCCCAGCAAATGAGTGCATCTCAAGGCTACACAGACAGAGTCCTTGAGAATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTACACCCAGCTGCTCATGTTACTTATTCTTGGGAATTGTGGGTAGTATTTTTGTTCTTCCTCAGCTCTaGGCCTACCGTTGTACCTAC | + |
|
Preference number: 3 (lower is better) Translates to: GTPSCSCYLFLGIVGSIFVLPQL*AYRCTY Trigger: GTAGGTACAACGGTAGGCCAAGAGCTGAGGAAGAAC...AAAAATACTACCCACAATTCCCAAGAATAAGTAACATGAGCAGCTGGGTGTACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR TCA 72 bp | ATTCTTACCATTATTCTCTGCCGTGTCAATAAATGCTaGTCACCCAATGTCTGGGCAGGAGAGAGACTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: ILTIILCRVNKC*SPNVWAGERLG Trigger: CCCTAGTCTCTCTCCTGCCCAGACATTGGGTGATCAGCATTTATTGACACGGCAGAGAATAATGGTAAGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| 3UTR TCA 72 bp | AGAAGAAATGCTATGGGAAATGCCTATGTGCACAAATaGCCGTTACCACACTATGAATGCGGACCTGCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: RRNAMGNAYVHK*PLPHYECGPAC Trigger: ACAGGCAGGTCCGCATTCATAGTGTGGTAACGGTCATTTGTGCACATAGGCATTTCCCATAGCATTTCTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| 3UTR GCA 72 bp | AAAGAAAGTCAGAACAAACTGCCTAATGCTACCAAATaGTGCAAGACAGAGCAAGTGTCTTGCACCCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: KESQNKLPNATK*CKTEQVSCTLQ Trigger: CTGCAGGGTGCAAGACACTTGCTCTGTCTTGCAGCATTTGGTAGCATTAGGCAGTTTGTTCTGACTTTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| 3UTR GCA 72 bp | GTGATAGGTGCCACACAAAACATTAGACACAGTATCTaGCCAGTGGGCGTACAATCTAATCTAAGGACGCAT | + |
|
Preference number: 3 (lower is better) Translates to: VIGATQNIRHSI*PVGVQSNLRTH Trigger: ATGCGTCCTTAGATTAGATTGTACGCCCACTGGGCAGATACTGTGTCTAATGTTTTGTGTGGCACCTATCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR-3UTR CAA 90 bp | AAATTCCTAAACATGCTCTTTTCTTTGCCAAGGTCACATCAAATGCCAAGTAGCGCTCTTGGCCTACCGTaGTACCTACAATCCCGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: KFLNMLFSLPRSHQMPSSALGLP*YLQSRV Trigger: AACTCGGGATTGTAGGTACAACGGTAGGCCAAGAGC...GCTACTTGGCATTTGATGTGACCTTGGCAAAGAAAAGAGCATGTTTAGGAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR GCA 72 bp | CCGTTACCACACTATGAATGCGGACCTGCCTGTAAATaGCTAAGTCAAGAGCATTTAACAAGAGTCAAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: PLPHYECGPACK*LSQEHLTRVKV Trigger: TACCTTGACTCTTGTTAAATGCTCTTGACTTAGGCATTTACAGGCAGGTCCGCATTCATAGTGTGGTAACGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| 3UTR GCA 72 bp | GAGCTTGACTCCTACTCCTGTAGGTCTCATGTTTTGTaGACTATGGAAGGTTTACCTTTGCTATTCAAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: ELDSYSCRSHVL*TMEGLPLLFKY Trigger: GTACTTGAATAGCAAAGGTAAACCTTCCATAGTGCACAAAACATGAGACCTACAGGAGTAGGAGTCAAGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| 3UTR GCA 72 bp | GTGTACAAAGAAGAAATGCTATGGGAAATGCCTATGTaGACAAATGACCGTTACCACACTATGAATGCGGAC | + |
|
Preference number: 3 (lower is better) Translates to: VYKEEMLWEMPM*TNDRYHTMNAD Trigger: GTCCGCATTCATAGTGTGGTAACGGTCATTTGTGCACATAGGCATTTCCCATAGCATTTCTTCTTTGTACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| 3UTR GCA 72 bp | GAAAAGTCTATTTTAAACTCTGTACTCAAGAGTCAATaGTTTGTTTCCCACAGTGCTCCTGCTGAGCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: EKSILNSVLKSQ*FVSHSAPAELS Trigger: GCTGAGCTCAGCAGGAGCACTGTGGGAAACAAAGCATTGACTCTTGAGTACAGAGTTTAAAATAGACTTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCATACAGGAATACTCACAAGAACACACTTGTTCTGCAGCATACATGTGAGAGGGATTGGCTCAAATaGTATTGGCTTTGGGAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: PPYRNTHKNTLVLQHTCERDWLK*YWLWEK Trigger: TTTTTCCCAAAGCCAATACAATTTGAGCCAATCCCT...CTCACATGTATGCTGCAGAACAAGTGTGTTCTTGTGAGTATTCCTGTATGGAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR-3UTR CAA 90 bp | CACTCTCTAGTGATTCACTGTTACTTCTGTCTCTTTAGATTGCAGGATCCTTTACTCAGTTTTCTCACATaGGTGCGTCCCTTCATGCTA | + |
|
Preference number: 3 (lower is better) Translates to: HSLVIHCYFCLFRLQDPLLSFLT*VRPFML Trigger: TAGCATGAAGGGACGCACCAATGTGAGAAAACTGAG...TAAAGGATCCTGCAATCTAAAGAGACAGAAGTAACAGTGAATCACTAGAGAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR-3UTR CAA 90 bp | AAATTCCTAAACATGCTCTTTTCTTTGCCAAGGTCACATCAAATGCCAAGTAGCAAACAGAGGGAGCCCTaGCTGTTCTGTTCTGAAACT | + |
|
Preference number: 3 (lower is better) Translates to: KFLNMLFSLPRSHQMPSSKQREP*LFCSET Trigger: AGTTTCAGAACAGAACAGCAAGGGCTCCCTCTGTTT...GCTACTTGGCATTTGATGTGACCTTGGCAAAGAAAAGAGCATGTTTAGGAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR TCA 72 bp | GCCTTTAAGACAGGTTTTGAGGGCACATGGTCTGAATaGGACACTCAGAATTCATCATTAATCCAAGTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: AFKTGFEGTWSE*DTQNSSLIQVN Trigger: GTTCACTTGGATTAATGATGAATTCTGAGTGTCTCATTCAGACCATGTGCCCTCAAAACCTGTCTTAAAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR GCA 72 bp | ATTTCTCTGCCCTCATATCATACCTGGACATGGCATTaGGATGCTTATACCAAGAATCTCCTGTTAAGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: ISLPSYHTWTWH*DAYTKNLLLSL Trigger: CAAACTTAACAGGAGATTCTTGGTATAAGCATCGCAATGCCATGTCCAGGTATGATATGAGGGCAGAGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| 3UTR GCA 72 bp | CTCCATACAGGAATACTCACAAGAACACACTTGTTCTaGAGCATACATGTGAGTGAAACTAAGGGTAGTATC | + |
|
Preference number: 3 (lower is better) Translates to: LHTGILTRTHLF*SIHVSETKGSI Trigger: GATACTACCCTTAGTTTCACTCACATGTATGCTGCAGAACAAGTGTGTTCTTGTGAGTATTCCTGTATGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR CCA 72 bp | TCATCTCCAATACACCAACAGTATGTATCTAGGAGTTaGTTCTTGGGTTCTGCTACAAAGAAAATCCCATCC | + |
|
Preference number: 3 (lower is better) Translates to: SSPIHQQYVSRS*FLGSATKKIPS Trigger: GGATGGGATTTTCTTTGTAGCAGAACCCAAGAACCAACTCCTAGATACATACTGTTGGTGTATTGGAGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAGAAATGCTATGGGAAATGCCTATGTGCACAAATGACCGTTACCACACTATGTGTAGGTCTCATGTTTaGTGCACTATGGAAGGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: EEMLWEMPMCTNDRYHTMCRSHV*CTMEGL Trigger: TAAACCTTCCATAGTGCACAAAACATGAGACCTACA...CATAGTGTGGTAACGGTCATTTGTGCACATAGGCATTTCCCATAGCATTTCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| 3UTR-3UTR CAA 90 bp | CAAAACAGCAATTGCAGGTTGGAGAAATGGCTTCATATGAAATGTATGAGTTGTGACCATCTTGAGGGATaGGCTCAAATTGTATTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: QNSNCRLEKWLHMKCMSCDHLEG*AQIVLA Trigger: AGCCAATACAATTTGAGCCAATCCCTCAAGATGGTC...ACAACTCATACATTTCATATGAAGCCATTTCTCCAACCTGCAATTGCTGTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR-3UTR CAA 90 bp | AAATTCCTAAACATGCTCTTTTCTTTGCCAAGGTCACATCAAATGCCAAGTAGCAACAGCAATTGCAGGTaGGAGAAATGGCTTCATATG | + |
|
Preference number: 3 (lower is better) Translates to: KFLNMLFSLPRSHQMPSSNSNCR*EKWLHM Trigger: CATATGAAGCCATTTCTCCAACCTGCAATTGCTGTT...GCTACTTGGCATTTGATGTGACCTTGGCAAAGAAAAGAGCATGTTTAGGAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTACACCCAGCTGCTCATGTTACTTATTCTTGGGAATTGTGGGTAGTATTTTTCCAATTTGTGAGACCTaGCTGAGTGTCTATATAGTT | + |
|
Preference number: 3 (lower is better) Translates to: GTPSCSCYLFLGIVGSIFPICET*LSVYIV Trigger: AACTATATAGACACTCAGCAAGGTCTCACAAATTGG...AAAAATACTACCCACAATTCCCAAGAATAAGTAACATGAGCAGCTGGGTGTACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR TCA 72 bp | AGCCCTTGCTGTTCTGTTCTGAAACTTCAAACATGCTaGCCAGTCACAATTCTAAGTAGATTTCAGTCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: SPCCSVLKLQTC*PVTILSRFQSD Trigger: ATCAGACTGAAATCTACTTAGAATTGTGACTGGTCAGCATGTTTGAAGTTTCAGAACAGAACAGCAAGGGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR GCA 72 bp | TCATTATGTGAAGACGAGGAGTGTACAAAGAAGAAATaGTATGGGAAATGCCTATGTGCACAAATGACCGTT | + |
|
Preference number: 3 (lower is better) Translates to: SLCEDEECTKKK*YGKCLCAQMTV Trigger: AACGGTCATTTGTGCACATAGGCATTTCCCATAGCATTTCTTCTTTGTACACTCCTCGTCTTCACATAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| 3UTR GCA 72 bp | CTTTCATACAGGTTTACCTATATAGGTACACCCAGCTaGTCATGTTACTTATTCTTGGGAATTGTGGGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: LSYRFTYIGTPS*SCYLFLGIVGS Trigger: ACTACCCACAATTCCCAAGAATAAGTAACATGAGCAGCTGGGTGTACCTATATAGGTAAACCTGTATGAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR CCA 72 bp | CAATACACCAACAGTATGTATCTAGGAGTTGGTTCTTaGGTTCTGCTACAAAGAAAATCCCATCCTGAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: QYTNSMYLGVGS*VLLQRKSHPEV Trigger: TACTTCAGGATGGGATTTTCTTTGTAGCAGAACCCAAGAACCAACTCCTAGATACATACTGTTGGTGTATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR TCA 72 bp | AAAGAGGGGGAGATTTTGTTGTTGTTGTTGTTGAATTaGGCCAGTATTGTTTGTTATTTGGCACAGGATAGG | + |
|
Preference number: 3 (lower is better) Translates to: KEGEILLLLLLN*ASIVCYLAQDR Trigger: CCTATCCTGTGCCAAATAACAAACAATACTGGCTCAATTCAACAACAACAACAACAAAATCTCCCCCTCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR GCA 72 bp | GGTCTCATGTTTTGTGCACTATGGAAGGTTTACCTTTaGTATTCAAGTACTTATTTCTCTGCCCTCATATCA | + |
|
Preference number: 3 (lower is better) Translates to: GLMFCALWKVYL*YSSTYFSALIS Trigger: TGATATGAGGGCAGAGAAATAAGTACTTGAATAGCAAAGGTAAACCTTCCATAGTGCACAAAACATGAGACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| 3UTR CCA 72 bp | ACTCCTACTCCTGTAGGTCTCATGTTTTGTGCACTATaGAAGGTTTACCTTTGCTATTCAAGTACTTATTTC | + |
|
Preference number: 3 (lower is better) Translates to: TPTPVGLMFCAL*KVYLCYSSTYF Trigger: GAAATAAGTACTTGAATAGCAAAGGTAAACCTTCCATAGTGCACAAAACATGAGACCTACAGGAGTAGGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| 3UTR CCA 72 bp | ATTAACAAACTGAACAATGTTGACAAGACAGATCTGTaGCCTTTTAAGGAAGTGTACCTAGACAGATGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: INKLNNVDKTDL*PFKEVYLDRWK Trigger: CTTCCATCTGTCTAGGTACACTTCCTTAAAAGGCCACAGATCTGTCTTGTCAACATTGTTCAGTTTGTTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| 3UTR CCA 72 bp | CACCCAGCTGCTCATGTTACTTATTCTTGGGAATTGTaGGTAGTATTTTTCTGTCATTTTATGATGAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: HPAAHVTYSWEL*VVFFCHFMMST Trigger: TGTGCTCATCATAAAATGACAGAAAAATACTACCCACAATTCCCAAGAATAAGTAACATGAGCAGCTGGGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR TCA 72 bp | ATTAGAAAGAGGGGGAGATTTTGTTGTTGTTGTTGTTaGATTGAGCCAGTATTGTTTGTTATTTGGCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: IRKRGRFCCCCC*IEPVLFVIWHR Trigger: CCTGTGCCAAATAACAAACAATACTGGCTCAATTCAACAACAACAACAACAAAATCTCCCCCTCTTTCTAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR-3UTR CAA 90 bp | AGACACTCAGAATTCATCATTAATCCAAGTGAACAGAGCTCATCCTTACTGTTTACATATAAACTTAGTTaGTGGACACAGGAACATGAG | + |
|
Preference number: 3 (lower is better) Translates to: RHSEFIINPSEQSSSLLFTYKLS*WTQEHE Trigger: CTCATGTTCCTGTGTCCACAAACTAAGTTTATATGT...AAACAGTAAGGATGAGCTCTGTTCACTTGGATTAATGATGAATTCTGAGTGTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR CAA 72 bp | CAATGTCTGGGCAGGAGAGAGACTAGGGTGGGACATTaGCAGCGAAGAGGGGCGGGGAGAGGAGACCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QCLGRRETRVGH*QRRGAGRGDQQ Trigger: CTGCTGGTCTCCTCTCCCCGCCCCTCTTCGCTGCAAATGTCCCACCCTAGTCTCTCTCCTGCCCAGACATTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| CDS-3UTR CCA 90 bp | TGGGACATTTGCAGCGAAGAGGGGCGGGGAGAGGAGACCAGCAGCAGATGGAGGAGGGTACTTGTTTGCTaGAGGCTTCACAGCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: WDICSEEGRGEETSSRWRRVLVC*RLHSSL Trigger: GAGGGAGCTGTGAAGCCTCCAGCAAACAAGTACCCT...CCTCCATCTGCTGCTGGTCTCCTCTCCCCGCCCCTCTTCGCTGCAAATGTCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| CDS-3UTR TCA 90 bp | GACATTTGCAGCGAAGAGGGGCGGGGAGAGGAGACCAGCAGCAGATGGAGGGATGAAGAGCTCTGTTGCTaGATTGTCTGGTACCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: DICSEEGRGEETSSRWRDEELCC*IVWYPV Trigger: TACTGGGTACCAGACAATTCAGCAACAGAGCTCTTC...ATCCCTCCATCTGCTGCTGGTCTCCTCTCCCCGCCCCTCTTCGCTGCAAATGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| 3UTR CAA 72 bp | AGCCTTGAGATGCACTCATTTGCTGGGCCTTTGGCTTaGTGCCCTAGGGAGTGTGTCTGCGGGCAGAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLEMHSFAGPLA*CPRECVCGQNL Trigger: AAGGTTCTGCCCGCAGACACACTCCCTAGGGCACAAAGCCAAAGGCCCAGCAAATGAGTGCATCTCAAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| CDS-3UTR GCA 90 bp | GACATTTGCAGCGAAGAGGGGCGGGGAGAGGAGACCAGCAGCAGATGGAGGGATTTCTTCCTCACTGCTTaGATCTGCAGTATTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: DICSEEGRGEETSSRWRDFFLTA*ICSIST Trigger: GGTGGAAATACTGCAGATGCAAGCAGTGAGGAAGAA...ATCCCTCCATCTGCTGCTGGTCTCCTCTCCCCGCCCCTCTTCGCTGCAAATGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| 3UTR CAA 72 bp | AAGGACTCTGTCTGTGTAGCCTTGAGATGCACTCATTaGCTGGGCCTTTGGCTTTGTGCCCTAGGGAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KDSVCVALRCTH*LGLWLCALGSV Trigger: CACACTCCCTAGGGCACAAAGCCAAAGGCCCAGCAAATGAGTGCATCTCAAGGCTACACAGACAGAGTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| CDS-3UTR CCA 90 bp | AGACAGCGGTATACACACAGCAAGACCTTGTCTCAAATACTGAGAGGAGGGATGCTTCACAGCTCCCTCTaGGAGTTCATCAATCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RQRYTHSKTLSQILRGGMLHSSL*EFINPG Trigger: GCCCGGATTGATGAACTCCCAGAGGGAGCTGTGAAG...CATCCCTCCTCTCAGTATTTGAGACAAGGTCTTGCTGTGTGTATACCGCTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| CDS-3UTR CCA 90 bp | AGCCTGAGCTACACGGTGAGGCAGACAGCGGTATACACACAGCAAGACCTTGTCATCATCTTCGTCTCCTaGAGATTTCCGGGACTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLSYTVRQTAVYTQQDLVIIFVS*RFPGLF Trigger: AAACAGTCCCGGAAATCTCCAGGAGACGAAGATGAT...GACAAGGTCTTGCTGTGTGTATACCGCTGTCTGCCTCACCGTGTAGCTCAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| CDS-3UTR GCA 90 bp | CTACACGGTGAGGCAGACAGCGGTATACACACAGCAAGACCTTGTCTCAAATACCTCCGCCCTCAGAGCTaGTTTTGTTCTCCTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LHGEADSGIHTARPCLKYLRPQS*FCSPLL Trigger: AAGAAGAGGAGAACAAAAGCAGCTCTGAGGGCGGAG...GTATTTGAGACAAGGTCTTGCTGTGTGTATACCGCTGTCTGCCTCACCGTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| 3UTR CAA 72 bp | GTGCCCTTTATTCTCAAGGACTCTGTCTGTGTAGCCTaGAGATGCACTCATTTGCTGGGCCTTTGGCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VPFILKDSVCVA*RCTHLLGLWLC Trigger: ACAAAGCCAAAGGCCCAGCAAATGAGTGCATCTCAAGGCTACACAGACAGAGTCCTTGAGAATAAAGGGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| CDS-3UTR GCA 90 bp | CTACACGGTGAGGCAGACAGCGGTATACACACAGCAAGACCTTGTCTCAAATACCACCTTCTTCCTCACTaGTTGCATCTGCAGTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LHGEADSGIHTARPCLKYHLLPH*LHLQYF Trigger: GAAATACTGCAGATGCAAGCAGTGAGGAAGAAGGTG...GTATTTGAGACAAGGTCTTGCTGTGTGTATACCGCTGTCTGCCTCACCGTGTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| 3UTR CAA 72 bp | GCACTAAACATAGCATATGGAGTTCTTCCTCAGCTCTaGGCCTACCGTTGTACCTACAATCCCGAGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALNIAYGVLPQL*AYRCTYNPEFF Trigger: GAAGAACTCGGGATTGTAGGTACAACGGTAGGCCAAGAGCTGAGGAAGAACTCCATATGCTATGTTTAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| CDS-3UTR TCA 90 bp | CTACACGGTGAGGCAGACAGCGGTATACACACAGCAAGACCTTGTCTCAAATACTTTAGAAGACTTCTTTaGCGTGTAGGACTTTTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LHGEADSGIHTARPCLKYFRRLL*RVGLFP Trigger: CGGAAAAAGTCCTACACGTCAAAGAAGTCTTCTAAA...GTATTTGAGACAAGGTCTTGCTGTGTGTATACCGCTGTCTGCCTCACCGTGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| CDS-3UTR TCA 90 bp | CTACACGGTGAGGCAGACAGCGGTATACACACAGCAAGACCTTGTCTCAAATACTCCTTTCCGTTTGTTTaGCTTTCCAAACTTGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LHGEADSGIHTARPCLKYSFPFV*LSKLVF Trigger: AAAGACAAGTTTGGAAAGTCAAACAAACGGAAAGGA...GTATTTGAGACAAGGTCTTGCTGTGTGTATACCGCTGTCTGCCTCACCGTGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| CDS-3UTR GCA 90 bp | AGCCTTCATGGGTCATTATGTGAAGACGAGGAGTGTACAAAGAAGAAATGCTATGGCTTTCTGCAAGTCTaGAGTCGTGTTTCTCGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLHGSLCEDEECTKKKCYGFLQV*SRVSRV Trigger: GACACGAGAAACACGACTGCAGACTTGCAGAAAGCC...ATAGCATTTCTTCTTTGTACACTCCTCGTCTTCACATAATGACCCATGAAGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| CDS-3UTR CCA 90 bp | CAAAACAGCAATTGCAGGTTGGAGAAATGGCTTCATATGAAATGTATGAGTTGTCTTCACAGCTCCCTCTaGGAGTTCATCAATCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QNSNCRLEKWLHMKCMSCLHSSL*EFINPG Trigger: GCCCGGATTGATGAACTCCCAGAGGGAGCTGTGAAG...ACAACTCATACATTTCATATGAAGCCATTTCTCCAACCTGCAATTGCTGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| CDS-3UTR CCA 90 bp | ACTTGGAAAAGGAGCCTAGACACAGAGAAGTCTGCAAAATCTTCATCATTCTTAAGGGTACTTGTTTGCTaGAGGCTTCACAGCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TWKRSLDTEKSAKSSSFLRVLVC*RLHSSL Trigger: GAGGGAGCTGTGAAGCCTCCAGCAAACAAGTACCCT...TAAGAATGATGAAGATTTTGCAGACTTCTCTGTGTCTAGGCTCCTTTTCCAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR CAA 72 bp | TGCCCGAGGAGAATCACAGTGTGGGTAAGCCACTTGTaGGTCCTTGTCAACACACATCAGGAATTTAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: CPRRITVWVSHL*VLVNTHQEFNF Trigger: AAAATTAAATTCCTGATGTGTGTTGACAAGGACCAACAAGTGGCTTACCCACACTGTGATTCTCCTCGGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| CDS-3UTR TCA 90 bp | GGTACACCCAGCTGCTCATGTTACTTATTCTTGGGAATTGTGGGTAGTATTTTTGAAGAGCTCTGTTGCTaGATTGTCTGGTACCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GTPSCSCYLFLGIVGSIFEELCC*IVWYPV Trigger: TACTGGGTACCAGACAATTCAGCAACAGAGCTCTTC...AAAAATACTACCCACAATTCCCAAGAATAAGTAACATGAGCAGCTGGGTGTACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| CDS-3UTR GCA 90 bp | AGACAGCGGTATACACACAGCAAGACCTTGTCTCAAATACTGAGAGGAGGGATGTGTTCTCCTCTTCTTTaGAGTCTTTATCATCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: RQRYTHSKTLSQILRGGMCSPLL*SLYHLR Trigger: ACGAAGATGATAAAGACTGCAAAGAAGAGGAGAACA...CATCCCTCCTCTCAGTATTTGAGACAAGGTCTTGCTGTGTGTATACCGCTGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| CDS-3UTR GCA 90 bp | AGAACACACTCTCTAGTGATTCACTGTTACTTCTGTCTCTTTAGATTGCAGGATCTCCGCCCTCAGAGCTaGTTTTGTTCTCCTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RTHSLVIHCYFCLFRLQDLRPQS*FCSPLL Trigger: AAGAAGAGGAGAACAAAAGCAGCTCTGAGGGCGGAG...ATCCTGCAATCTAAAGAGACAGAAGTAACAGTGAATCACTAGAGAGTGTGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| CDS-3UTR GCA 90 bp | AAATTCCTAAACATGCTCTTTTCTTTGCCAAGGTCACATCAAATGCCAAGTAGCGGCTTTCTGCAAGTCTaGAGTCGTGTTTCTCGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KFLNMLFSLPRSHQMPSSGFLQV*SRVSRV Trigger: GACACGAGAAACACGACTGCAGACTTGCAGAAAGCC...GCTACTTGGCATTTGATGTGACCTTGGCAAAGAAAAGAGCATGTTTAGGAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR CAA 72 bp | TATCCCCTCCATACAGGAATACTCACAAGAACACACTaGTTCTGCAGCATACATGTGAGTGAAACTAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: YPLHTGILTRTH*FCSIHVSETKG Trigger: ACCCTTAGTTTCACTCACATGTATGCTGCAGAACAAGTGTGTTCTTGTGAGTATTCCTGTATGGAGGGGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR CAA 72 bp | ATAGAGCTTGACTCCTACTCCTGTAGGTCTCATGTTTaGTGCACTATGGAAGGTTTACCTTTGCTATTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: IELDSYSCRSHV*CTMEGLPLLFK Trigger: CTTGAATAGCAAAGGTAAACCTTCCATAGTGCACAAAACATGAGACCTACAGGAGTAGGAGTCAAGCTCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| CDS-3UTR GCA 90 bp | ACTTGGAAAAGGAGCCTAGACACAGAGAAGTCTGCAAAATCTTCATCATTCTTATTCTTCCTCACTGCTTaGATCTGCAGTATTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: TWKRSLDTEKSAKSSSFLFFLTA*ICSIST Trigger: GGTGGAAATACTGCAGATGCAAGCAGTGAGGAAGAA...TAAGAATGATGAAGATTTTGCAGACTTCTCTGTGTCTAGGCTCCTTTTCCAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| CDS-3UTR GCA 90 bp | AAATTCCTAAACATGCTCTTTTCTTTGCCAAGGTCACATCAAATGCCAAGTAGCCACCTTCTTCCTCACTaGTTGCATCTGCAGTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: KFLNMLFSLPRSHQMPSSHLLPH*LHLQYF Trigger: GAAATACTGCAGATGCAAGCAGTGAGGAAGAAGGTG...GCTACTTGGCATTTGATGTGACCTTGGCAAAGAAAAGAGCATGTTTAGGAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR CAA 72 bp | TATTTCTCTGCCCTCATATCATACCTGGACATGGCATaGCGATGCTTATACCAAGAATCTCCTGTTAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: YFSALISYLDMA*RCLYQESPVKF Trigger: AAACTTAACAGGAGATTCTTGGTATAAGCATCGCAATGCCATGTCCAGGTATGATATGAGGGCAGAGAAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| CDS-3UTR TCA 90 bp | GGCTCTGTCAATGACAACAAAGACCGTTGGTTCATATCAAATCCAAATCCAAGATCCTTTCCGTTTGTTTaGCTTTCCAAACTTGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GSVNDNKDRWFISNPNPRSFPFV*LSKLVF Trigger: AAAGACAAGTTTGGAAAGTCAAACAAACGGAAAGGA...TCTTGGATTTGGATTTGATATGAACCAACGGTCTTTGTTGTCATTGACAGAGCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR CAA 72 bp | AGGTCTCATGTTTTGTGCACTATGGAAGGTTTACCTTaGCTATTCAAGTACTTATTTCTCTGCCCTCATATC | + |
|
Preference number: 4 (lower is better) Translates to: RSHVLCTMEGLP*LFKYLFLCPHI Trigger: GATATGAGGGCAGAGAAATAAGTACTTGAATAGCAAAGGTAAACCTTCCATAGTGCACAAAACATGAGACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| 3UTR CAA 72 bp | GTACACCCAGCTGCTCATGTTACTTATTCTTGGGAATaGTGGGTAGTATTTTTCTGTCATTTTATGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VHPAAHVTYSWE*WVVFFCHFMMS Trigger: GCTCATCATAAAATGACAGAAAAATACTACCCACAATTCCCAAGAATAAGTAACATGAGCAGCTGGGTGTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR CAA 72 bp | CATTGCGATGCTTATACCAAGAATCTCCTGTTAAGTTaGTGTAAACATTCTTACCATTATTCTCTGCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HCDAYTKNLLLS*CKHSYHYSLPC Trigger: ACACGGCAGAGAATAATGGTAAGAATGTTTACACAAACTTAACAGGAGATTCTTGGTATAAGCATCGCAATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
||
| 3UTR CAA 72 bp | TCTCTAGTGATTCACTGTTACTTCTGTCTCTTTAGATaGCAGGATCCTTTATCGTCTCACTTTGATCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLVIHCYFCLFR*QDPLSSHFDHS Trigger: ACTATGATCAAAGTGAGACGATAAAGGATCCTGCAATCTAAAGAGACAGAAGTAACAGTGAATCACTAGAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
||
| 3UTR CAA 72 bp | TGCCATTTATACAAATTCCTAAACATGCTCTTTTCTTaGCCAAGGTCACATCAAATGCCAAGTAGCACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CHLYKFLNMLFS*PRSHQMPSSTF Trigger: AAAAGTGCTACTTGGCATTTGATGTGACCTTGGCAAAGAAAAGAGCATGTTTAGGAATTTGTATAAATGGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
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| 3UTR CAA 72 bp | TATATAGGTACACCCAGCTGCTCATGTTACTTATTCTaGGGAATTGTGGGTAGTATTTTTCTGTCATTTTAT | + |
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Preference number: 4 (lower is better) Translates to: YIGTPSCSCYLF*GIVGSIFLSFY Trigger: ATAAAATGACAGAAAAATACTACCCACAATTCCCAAGAATAAGTAACATGAGCAGCTGGGTGTACCTATATA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
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| CDS-3UTR CAA 90 bp | TCCTTTATCCCCTCCATACAGGAATACTCACAAGAACACACTTGTTCTGCAGCAACCAGGTCTCCCGCTTaGTACTCGCGGGGCCGCGGA | + |
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Preference number: 5 (lower is better) Translates to: SFIPSIQEYSQEHTCSAATRSPA*YSRGRG Trigger: TCCGCGGCCCCGCGAGTACAAAGCGGGAGACCTGGT...TGCTGCAGAACAAGTGTGTTCTTGTGAGTATTCCTGTATGGAGGGGATAAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
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| CDS GCA 90 bp | TGCCAGCGTCTCCGCCCTCAGAGCTGCTTTTGTTCTCCTCTTCTTTaGAGTCTTTATCATCTTCGTCTCCTGGAGATTTCCGGGACTGTT | + |
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Preference number: 5 (lower is better) Translates to: CQRLRPQSCFCSPLL*SLYHLRLLEISGTV Trigger: AACAGTCCCGGAAATCTCCAGGAGACGAAGATGATAAAGACTGCAAAGAAGAGGAGAACAAAAGCAGCTCTGAGGGCGGAGACGCTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026094.6 ENSMUST00000107305.8 |
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| CDS-3UTR CAA 90 bp | GTTTTGTGCACTATGGAAGGTTTACCTTTGCTATTCAAGTACTTATTTCTCTGCACCAGGTCTCCCGCTTaGTACTCGCGGGGCCGCGGA | + |
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Preference number: 5 (lower is better) Translates to: VLCTMEGLPLLFKYLFLCTRSPA*YSRGRG Trigger: TCCGCGGCCCCGCGAGTACAAAGCGGGAGACCTGGT...GCAGAGAAATAAGTACTTGAATAGCAAAGGTAAACCTTCCATAGTGCACAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
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| CDS-3UTR CAA 90 bp | CCTCCATACAGGAATACTCACAAGAACACACTTGTTCTGCAGCATACATGTGAGCTTCTTCCTCACTGCTaGCATCTGCAGTATTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: PPYRNTHKNTLVLQHTCELLPHC*HLQYFH Trigger: GTGGAAATACTGCAGATGCAAGCAGTGAGGAAGAAG...CTCACATGTATGCTGCAGAACAAGTGTGTTCTTGTGAGTATTCCTGTATGGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
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| CDS-3UTR CAA 90 bp | AATGTACCTGGTGGGCATCACCATTCACCCACTCATTCCATCACTGTAAGCAAGATCCTTTCCGTTTGTTaGACTTTCCAAACTTGTCTT | + |
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Preference number: 5 (lower is better) Translates to: NVPGGHHHSPTHSITVSKILSVC*TFQTCL Trigger: AAGACAAGTTTGGAAAGTCAAACAAACGGAAAGGAT...CTTGCTTACAGTGATGGAATGAGTGGGTGAATGGTGATGCCCACCAGGTACATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
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| CDS-3UTR CAA 90 bp | AGCCTTCATGGGTCATTATGTGAAGACGAGGAGTGTACAAAGAAGAAATGCTATCTTCTTCCTCACTGCTaGCATCTGCAGTATTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: SLHGSLCEDEECTKKKCYLLPHC*HLQYFH Trigger: GTGGAAATACTGCAGATGCAAGCAGTGAGGAAGAAG...ATAGCATTTCTTCTTTGTACACTCCTCGTCTTCACATAATGACCCATGAAGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
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| CDS-3UTR CAA 90 bp | AGCCTTCATGGGTCATTATGTGAAGACGAGGAGTGTACAAAGAAGAAATGCTATAAGAAGATAGGGTACTaGTTTGCTGGAGGCTTCACA | + |
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Preference number: 5 (lower is better) Translates to: SLHGSLCEDEECTKKKCYKKIGY*FAGGFT Trigger: TGTGAAGCCTCCAGCAAACAAGTACCCTATCTTCTT...ATAGCATTTCTTCTTTGTACACTCCTCGTCTTCACATAATGACCCATGAAGGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
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| CDS-3UTR CAA 90 bp | GGCTCTGTCAATGACAACAAAGACCGTTGGTTCATATCAAATCCAAATCCAAGAAAGAAGATAGGGTACTaGTTTGCTGGAGGCTTCACA | + |
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Preference number: 5 (lower is better) Translates to: GSVNDNKDRWFISNPNPRKKIGY*FAGGFT Trigger: TGTGAAGCCTCCAGCAAACAAGTACCCTATCTTCTT...TCTTGGATTTGGATTTGATATGAACCAACGGTCTTTGTTGTCATTGACAGAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
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| CDS-3UTR CAA 90 bp | TTTGCTATTCAAGTACTTATTTCTCTGCCCTCATATCATACCTGGACATGGCATAGGACTTTTTCCGTTTaGAGCCTCCTTTTTCATTCT | + |
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Preference number: 5 (lower is better) Translates to: FAIQVLISLPSYHTWTWHRTFSV*SLLFHS Trigger: AGAATGAAAAAGGAGGCTCAAAACGGAAAAAGTCCT...ATGCCATGTCCAGGTATGATATGAGGGCAGAGAAATAAGTACTTGAATAGCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026094.6 |
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| CDS-3UTR CAA 90 bp | ACTTGGAAAAGGAGCCTAGACACAGAGAAGTCTGCAAAATCTTCATCATTCTTAAGGACTTTTTCCGTTTaGAGCCTCCTTTTTCATTCT | + |
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Preference number: 5 (lower is better) Translates to: TWKRSLDTEKSAKSSSFLRTFSV*SLLFHS Trigger: AGAATGAAAAAGGAGGCTCAAAACGGAAAAAGTCCT...TAAGAATGATGAAGATTTTGCAGACTTCTCTGTGTCTAGGCTCCTTTTCCAAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000107305.8 |
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