Pregenerated sensors for HDAC3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024454Ensembl transcript IDs: ENSMUST00000043498.9, ENSMUST00000235700.2, ENSMUST00000236756.2
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCTTCAGCGTCGGCCTCGTCAGTCCTGTCATACGTCAGGAGGTCTaGCGGGACATCATGAATCTGGACACTGGGTGCATGGTTCAGCAT | + |
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Preference number: 1 (lower is better) Translates to: LFSVGLVSPVIRQEV*RDIMNLDTGCMVQH Trigger: ATGCTGAACCATGCACCCAGTGTCCAGATTCATGATGTCCCGGCAGACCTCCTGACGTATGACAGGACTGACGAGGCCGACGCTGAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236756.2 |
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| 3UTR CCA 90 bp | CACGATGCACGTCGGCTGGTAGAAGTCCACCACCTGGCTGATGACTaGCTGGAAAAGGTGCTTGTAACTCTGGTCATCAATGCCATCTCG | + |
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Preference number: 1 (lower is better) Translates to: HDARRLVEVHHLADD*LEKVLVTLVINAIS Trigger: CGAGATGGCATTGATGACCAGAGTTACAAGCACCTTTTCCAGCCAGTCATCAGCCAGGTGGTGGACTTCTACCAGCCGACGTGCATCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235700.2 |
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| 3UTR GCA 90 bp | GTTAAGGTTTCAGAGAGCCACGCCTTCCTCCCCTCAGGTTCACCTTaGATGGAAGCAAGAACTGTAGTAGGGGAACCCAGAAGGAAGTCA | + |
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Preference number: 1 (lower is better) Translates to: VKVSESHAFLPSGSP*MEARTVVGEPRRKS Trigger: TGACTTCCTTCTGGGTTCCCCTACTACAGTTCTTGCTTCCATGCAAGGTGAACCTGAGGGGAGGAAGGCGTGGCTCTCTGAAACCTTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| 3UTR GCA 90 bp | CACCACAGAGGTGACAAGGAACTCTTGGGGACACAGCATCCATGCTaGTCTAAATCTCCACATCACTTTCCTTGTCGTTGTCATGGTCGC | + |
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Preference number: 1 (lower is better) Translates to: HHRGDKELLGTQHPC*SKSPHHFPCRCHGR Trigger: GCGACCATGACAACGACAAGGAAAGTGATGTGGAGATTTAGAGCAGCATGGATGCTGTGTCCCCAAGAGTTCCTTGTCACCTCTGTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236756.2 |
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| 3UTR TCA 90 bp | GGTGCTTGTAACTCTGGTCATCAATGCCATCTCGTAAGGGCACATTaGGACAATAGTAGCGGCCACTCTCTGCTCCAACTTCATACATGT | + |
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Preference number: 1 (lower is better) Translates to: GACNSGHQCHLVRAH*DNSSGHSLLQLHTC Trigger: ACATGTATGAAGTTGGAGCAGAGAGTGGCCGCTACTATTGTCTCAATGTGCCCTTACGAGATGGCATTGATGACCAGAGTTACAAGCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235700.2 |
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| 3UTR TCA 90 bp | CCATGTCTCATCCCTGAGAGGGACAATCATCAGGCCGTGAGAGTTTaGGGGAAAGGGGAGTTAATTCTAGAACCACATATGGTTTCCAAA | + |
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Preference number: 1 (lower is better) Translates to: PCLIPERDNHQAVRV*GKGELILEPHMVSK Trigger: TTTGGAAACCATATGTGGTTCTAGAATTAACTCCCCTTTCCCTCAAACTCTCACGGCCTGATGATTGTCCCTCTCAGGGATGAGACATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| 3UTR-3UTR CCA 90 bp | GAGCACGATGCACGTCGGCTGGTAGAAGTCCACCACCTGGCTGATGACTGGCTGAGGCCTCAAATTTCTTaGCATGATGTAGACCACCGG | + |
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Preference number: 2 (lower is better) Translates to: EHDARRLVEVHHLADDWLRPQIS*HDVDHR Trigger: CCGGTGGTCTACATCATGCCAAGAAATTTGAGGCCT...CAGCCAGTCATCAGCCAGGTGGTGGACTTCTACCAGCCGACGTGCATCGTGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235700.2 |
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| 3UTR-3UTR TCA 90 bp | TTAAGGTTTCAGAGAGCCACGCCTTCCTCCCCTCAGGTTCACCTTGCATGGAAGGACAGAAGGAACAAATaGGGGGAAGAGGGGCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: LRFQRATPSSPQVHLAWKDRRNK*GEEGLR Trigger: CCTCAGCCCCTCTTCCCCTCATTTGTTCCTTCTGTC...CTTCCATGCAAGGTGAACCTGAGGGGAGGAAGGCGTGGCTCTCTGAAACCTTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| 3UTR-3UTR GCA 90 bp | TCTCTCTTCAGCGTCGGCCTCGTCAGTCCTGTCATACGTCAGGAGGTCTGCCGGAATCTGGACACTGGGTaGATGGTTCAGCATCTTCAA | + |
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Preference number: 2 (lower is better) Translates to: SLFSVGLVSPVIRQEVCRNLDTG*MVQHLQ Trigger: TTGAAGATGCTGAACCATGCACCCAGTGTCCAGATT...CCGGCAGACCTCCTGACGTATGACAGGACTGACGAGGCCGACGCTGAAGAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236756.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTCTCTTCAGCGTCGGCCTCGTCAGTCCTGTCATACGTCAGGAGGTCTGCCGTGGACACTGGGTGCATaGTTCAGCATCTTCAAGTTT | + |
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Preference number: 2 (lower is better) Translates to: LSLQRRPRQSCHTSGGLPWTLGA*FSIFKF Trigger: AAACTTGAAGATGCTGAACCATGCACCCAGTGTCCA...CGGCAGACCTCCTGACGTATGACAGGACTGACGAGGCCGACGCTGAAGAGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236756.2 |
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| 3UTR-3UTR CCA 90 bp | ACCTCTCTCTTCAGCGTCGGCCTCGTCAGTCCTGTCATACGTCAGGAGGTCTGCCATGAATCTGGACACTaGGTGCATGGTTCAGCATCT | + |
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Preference number: 2 (lower is better) Translates to: TSLFSVGLVSPVIRQEVCHESGH*VHGSAS Trigger: AGATGCTGAACCATGCACCCAGTGTCCAGATTCATG...GCAGACCTCCTGACGTATGACAGGACTGACGAGGCCGACGCTGAAGAGAGAGGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236756.2 |
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| 3UTR-3UTR TCA 90 bp | GGCTCATTACCCATAACGTTCCAGAGACCTGTCCATGTCTCATCCCTGAGAGGGACAATCATCAGGCCGTaGGAGTTTGAGGGAAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: GSLPITFQRPVHVSSLRGTIIRP*EFEGKG Trigger: CCCCTTTCCCTCAAACTCTCACGGCCTGATGATTGT...CCCTCTCAGGGATGAGACATGGACAGGTCTCTGGAACGTTATGGGTAATGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| 3UTR-3UTR GCA 90 bp | CCTTGCATGGAAGCAAGAACTGTAGTAGGGGAACCCAGAAGGAAGTCAGAGGTGGGGGCTGAGGACAGTTaGTGGGGCTCATTACCCATA | + |
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Preference number: 2 (lower is better) Translates to: PCMEARTVVGEPRRKSEVGAEDS*WGSLPI Trigger: TATGGGTAATGAGCCCCAGCAACTGTCCTCAGCCCC...CACCTCTGACTTCCTTCTGGGTTCCCCTACTACAGTTCTTGCTTCCATGCAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| 3UTR-3UTR TCA 90 bp | GTGGATGTCGATATCAATGTAGAGCACCCGAGGGTGGTACTTAAGCAGCTCCAGTCAAATTTCTTGGCATaGTGTAGACCACCGGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: VDVDINVEHPRVVLKQLQSNFLA*CRPPAQ Trigger: CTGGGCCGGTGGTCTACATCATGCCAAGAAATTTGA...CTGGAGCTGCTTAAGTACCACCCTCGGGTGCTCTACATTGATATCGACATCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235700.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCAGAGAGCCACGCCTTCCTCCCCTCAGGTTCACCTTGCATGGAAGCAAGAATACCCAGTTCAGACCTaGGGAAACCATACTTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: FQRATPSSPQVHLAWKQEYPVQT*GNHTFL Trigger: AAGGAAAGTATGGTTTCCCCAGGTCTGAACTGGGTA...TTCTTGCTTCCATGCAAGGTGAACCTGAGGGGAGGAAGGCGTGGCTCTCTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| 3UTR-3UTR TCA 90 bp | GCCACTCTCTGCTCCAACTTCATACATGTCACCTGTTCCAGGAAAGAAGTAATTCAATTACTATGTCATTaGCATAGCAGAAGCCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: ATLCSNFIHVTCSRKEVIQLLCH*HSRSQR Trigger: CCTCTGGCTTCTGCTATGTCAATGACATAGTAATTG...AATTACTTCTTTCCTGGAACAGGTGACATGTATGAAGTTGGAGCAGAGAGTGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235700.2 |
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| 3UTR GCA 72 bp | GTCGGCCTCGTCAGTCCTGTCATACGTCAGGAGGTCTaGCGGGACATCATGAATCTGGACACTGGGTGCATG | + |
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Preference number: 3 (lower is better) Translates to: VGLVSPVIRQEV*RDIMNLDTGCM Trigger: CATGCACCCAGTGTCCAGATTCATGATGTCCCGGCAGACCTCCTGACGTATGACAGGACTGACGAGGCCGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236756.2 |
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| 3UTR GCA 72 bp | TCAGAGAGCCACGCCTTCCTCCCCTCAGGTTCACCTTaGATGGAAGCAAGAACTGTAGTAGGGGAACCCAGA | + |
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Preference number: 3 (lower is better) Translates to: SESHAFLPSGSP*MEARTVVGEPR Trigger: TCTGGGTTCCCCTACTACAGTTCTTGCTTCCATGCAAGGTGAACCTGAGGGGAGGAAGGCGTGGCTCTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| 3UTR GCA 72 bp | GGTCGCCATCATAGAACTCATTGGGTGCTTCTGGCCTaGTGTAGTTCTCCTCGGGACCTCTCTCTTCAGCGT | + |
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Preference number: 3 (lower is better) Translates to: GRHHRTHWVLLA*CSSPRDLSLQR Trigger: ACGCTGAAGAGAGAGGTCCCGAGGAGAACTACAGCAGGCCAGAAGCACCCAATGAGTTCTATGATGGCGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236756.2 |
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| 3UTR-3UTR CAA 90 bp | TTAAGGTTTCAGAGAGCCACGCCTTCCTCCCCTCAGGTTCACCTTGCATGGAAGGGTGACAAGGAACTCTaGGGGACACAGCATCCATGC | + |
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Preference number: 3 (lower is better) Translates to: LRFQRATPSSPQVHLAWKGDKEL*GTQHPC Trigger: GCATGGATGCTGTGTCCCCAAGAGTTCCTTGTCACC...CTTCCATGCAAGGTGAACCTGAGGGGAGGAAGGCGTGGCTCTCTGAAACCTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| 3UTR TCA 72 bp | CCTGGGGAAACCATACTTTCCTTCCCACCACAGAGGTaGCAAGGAACTCTTGGGGACACAGCATCCATGCTG | + |
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Preference number: 3 (lower is better) Translates to: PGETILSFPPQR*QGTLGDTASML Trigger: CAGCATGGATGCTGTGTCCCCAAGAGTTCCTTGTCACCTCTGTGGTGGGAAGGAAAGTATGGTTTCCCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| 3UTR CCA 72 bp | CCTTGTCGTTGTCATGGTCGCCATCATAGAACTCATTaGGTGCTTCTGGCCTGCTGTAGTTCTCCTCGGGAC | + |
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Preference number: 3 (lower is better) Translates to: PCRCHGRHHRTH*VLLACCSSPRD Trigger: GTCCCGAGGAGAACTACAGCAGGCCAGAAGCACCCAATGAGTTCTATGATGGCGACCATGACAACGACAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236756.2 |
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| 3UTR CCA 72 bp | CGTCGGCTGGTAGAAGTCCACCACCTGGCTGATGACTaGCTGGAAAAGGTGCTTGTAACTCTGGTCATCAAT | + |
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Preference number: 3 (lower is better) Translates to: RRLVEVHHLADD*LEKVLVTLVIN Trigger: ATTGATGACCAGAGTTACAAGCACCTTTTCCAGCCAGTCATCAGCCAGGTGGTGGACTTCTACCAGCCGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235700.2 |
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| 3UTR-3UTR CAA 90 bp | GGCTCATTACCCATAACGTTCCAGAGACCTGTCCATGTCTCATCCCTGAGAGGGTCAGGCCGTGAGAGTTaGAGGGAAAGGGGAGTTAAT | + |
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Preference number: 3 (lower is better) Translates to: GSLPITFQRPVHVSSLRGSGRES*RERGVN Trigger: ATTAACTCCCCTTTCCCTCAAACTCTCACGGCCTGA...CCCTCTCAGGGATGAGACATGGACAGGTCTCTGGAACGTTATGGGTAATGAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| 3UTR-3UTR CAA 90 bp | CATCACTTTCCTTGTCGTTGTCATGGTCGCCATCATAGAACTCATTGGGTGCTTGGTGACAAGGAACTCTaGGGGACACAGCATCCATGC | + |
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Preference number: 3 (lower is better) Translates to: HHFPCRCHGRHHRTHWVLGDKEL*GTQHPC Trigger: GCATGGATGCTGTGTCCCCAAGAGTTCCTTGTCACC...AAGCACCCAATGAGTTCTATGATGGCGACCATGACAACGACAAGGAAAGTGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236756.2 |
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| 3UTR TCA 72 bp | AACTCTGGTCATCAATGCCATCTCGTAAGGGCACATTaGGACAATAGTAGCGGCCACTCTCTGCTCCAACTT | + |
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Preference number: 3 (lower is better) Translates to: NSGHQCHLVRAH*DNSSGHSLLQL Trigger: AAGTTGGAGCAGAGAGTGGCCGCTACTATTGTCTCAATGTGCCCTTACGAGATGGCATTGATGACCAGAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235700.2 |
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| 3UTR GCA 72 bp | GGTGACAAGGAACTCTTGGGGACACAGCATCCATGCTaGTCTAAATCTCCACATCACTTTCCTTGTCGTTGT | + |
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Preference number: 3 (lower is better) Translates to: GDKELLGTQHPC*SKSPHHFPCRC Trigger: ACAACGACAAGGAAAGTGATGTGGAGATTTAGAGCAGCATGGATGCTGTGTCCCCAAGAGTTCCTTGTCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236756.2 |
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| 3UTR GCA 72 bp | AGAGGTGACAAGGAACTCTTGGGGACACAGCATCCATaGTGCTCTAAATCTCCACATCACTTTCCTTGTCGT | + |
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Preference number: 3 (lower is better) Translates to: RGDKELLGTQHP*CSKSPHHFPCR Trigger: ACGACAAGGAAAGTGATGTGGAGATTTAGAGCAGCATGGATGCTGTGTCCCCAAGAGTTCCTTGTCACCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236756.2 |
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| 3UTR TCA 72 bp | ATCCCTGAGAGGGACAATCATCAGGCCGTGAGAGTTTaGGGGAAAGGGGAGTTAATTCTAGAACCACATATG | + |
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Preference number: 3 (lower is better) Translates to: IPERDNHQAVRV*GKGELILEPHM Trigger: CATATGTGGTTCTAGAATTAACTCCCCTTTCCCTCAAACTCTCACGGCCTGATGATTGTCCCTCTCAGGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR TCA 90 bp | TTCAGCGTCGGCCTCGTCAGTCCTGTCATACGTCAGGAGGTCTGCCGGGACATCTACTGGCGTGAGTTCTaGTTCTCGATGCGGGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: FSVGLVSPVIRQEVCRDIYWREF*FSMRVL Trigger: CAGCACCCGCATCGAGAATCAGAACTCACGCCAGTA...GATGTCCCGGCAGACCTCCTGACGTATGACAGGACTGACGAGGCCGACGCTGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236756.2 |
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| CDS-3UTR TCA 90 bp | TTCAGCGTCGGCCTCGTCAGTCCTGTCATACGTCAGGAGGTCTGCCGGGACATCGTCAATGCCAGGCGATaGGGTTTCATTGGGTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: FSVGLVSPVIRQEVCRDIVNARR*GFIGCP Trigger: TGGACACCCAATGAAACCTCATCGCCTGGCATTGAC...GATGTCCCGGCAGACCTCCTGACGTATGACAGGACTGACGAGGCCGACGCTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236756.2 |
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| CDS-3UTR TCA 90 bp | TCTCTCTTCAGCGTCGGCCTCGTCAGTCCTGTCATACGTCAGGAGGTCTGCCGGCATCTGGATGGAGTGTaGAATCTGGGGCAAAGTACT | + |
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Preference number: 4 (lower is better) Translates to: SLFSVGLVSPVIRQEVCRHLDGV*NLGQST Trigger: AGTACTTTGCCCCAGATTTCACACTCCATCCAGATG...CCGGCAGACCTCCTGACGTATGACAGGACTGACGAGGCCGACGCTGAAGAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236756.2 |
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| CDS-3UTR GCA 90 bp | GGAAGAGGGGCTGAGGACAGTTGCTGGGGCTCATTACCCATAACGTTCCAGAGATGCTCCTTGCAGAGATaGGCCTGTGTAACGGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: GRGAEDSCWGSLPITFQRCSLQR*ACVTGA Trigger: TGCTCCCGTTACACAGGCGCATCTCTGCAAGGAGCA...TCTCTGGAACGTTATGGGTAATGAGCCCCAGCAACTGTCCTCAGCCCCTCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR TCA 90 bp | CCTTCACCAGAGTTAGTAAACACCCTGGGGGTACCCAGTTCAGACCTGGGGAAATCTGCCGGGACATCATaGATCTGGACACTGGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: PSPELVNTLGVPSSDLGKSAGTS*IWTLGA Trigger: TGCACCCAGTGTCCAGATTCATGATGTCCCGGCAGA...TTTCCCCAGGTCTGAACTGGGTACCCCCAGGGTGTTTACTAACTCTGGTGAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR TCA 90 bp | CATCTGCAGTTAAGGTTTCAGAGAGCCACGCCTTCCTCCCCTCAGGTTCACCTTGTCAATGCCAGGCGATaGGGTTTCATTGGGTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: HLQLRFQRATPSSPQVHLVNARR*GFIGCP Trigger: TGGACACCCAATGAAACCTCATCGCCTGGCATTGAC...AAGGTGAACCTGAGGGGAGGAAGGCGTGGCTCTCTGAAACCTTAACTGCAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR TCA 90 bp | TCCAAACCCTTCACCAGAGTTAGTAAACACCCTGGGGGTACCCAGTTCAGACCTGCATATTGGTGGGGCTaGCTCTCTGCAGGAAGTCGA | + |
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Preference number: 4 (lower is better) Translates to: SKPFTRVSKHPGGTQFRPAYWWG*LSAGSR Trigger: TCGACTTCCTGCAGAGAGTCAGCCCCACCAATATGC...AGGTCTGAACTGGGTACCCCCAGGGTGTTTACTAACTCTGGTGAAGGGTTTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR TCA 90 bp | CCAGAGTTAGTAAACACCCTGGGGGTACCCAGTTCAGACCTGGGGAAACCATACGACCACCGGCCCAGTTaGTGGCAATATCACAGATCT | + |
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Preference number: 4 (lower is better) Translates to: PELVNTLGVPSSDLGKPYDHRPS*WQYHRS Trigger: AGATCTGTGATATTGCCATCAACTGGGCCGGTGGTC...GTATGGTTTCCCCAGGTCTGAACTGGGTACCCCCAGGGTGTTTACTAACTCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR TCA 90 bp | TCCAAACCCTTCACCAGAGTTAGTAAACACCCTGGGGGTACCCAGTTCAGACCTTACTGGCGTGAGTTCTaGTTCTCGATGCGGGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: SKPFTRVSKHPGGTQFRPYWREF*FSMRVL Trigger: CAGCACCCGCATCGAGAATCAGAACTCACGCCAGTA...AGGTCTGAACTGGGTACCCCCAGGGTGTTTACTAACTCTGGTGAAGGGTTTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR TCA 90 bp | GGCTCATTACCCATAACGTTCCAGAGACCTGTCCATGTCTCATCCCTGAGAGGGGTCCAGATACTGGCGTaGGTTCTGATTCTCGATGCG | + |
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Preference number: 4 (lower is better) Translates to: GSLPITFQRPVHVSSLRGVQILA*VLILDA Trigger: CGCATCGAGAATCAGAACTCACGCCAGTATCTGGAC...CCCTCTCAGGGATGAGACATGGACAGGTCTCTGGAACGTTATGGGTAATGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR CCA 90 bp | GTTAAGGTTTCAGAGAGCCACGCCTTCCTCCCCTCAGGTTCACCTTGCATGGAAGCGGGTGCTGACATCTaGATGGAGTGTGAAATCTGG | + |
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Preference number: 4 (lower is better) Translates to: VKVSESHAFLPSGSPCMEAGADI*MECEIW Trigger: CCAGATTTCACACTCCATCCAGATGTCAGCACCCGC...TTCCATGCAAGGTGAACCTGAGGGGAGGAAGGCGTGGCTCTCTGAAACCTTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR CCA 90 bp | CTGGGGCTCATTACCCATAACGTTCCAGAGACCTGTCCATGTCTCATCCCTGAGATTGTCTGGCGGATCTaGTCCAGATACTGGCGTGAG | + |
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Preference number: 4 (lower is better) Translates to: LGLITHNVPETCPCLIPEIVWRI*SRYWRE Trigger: CTCACGCCAGTATCTGGACCAGATCCGCCAGACAAT...CTCAGGGATGAGACATGGACAGGTCTCTGGAACGTTATGGGTAATGAGCCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR CCA 90 bp | CTGGGGCTCATTACCCATAACGTTCCAGAGACCTGTCCATGTCTCATCCCTGAGCTCATTGGGTGCTTCTaGCCTGCTGTAGTTCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: LGLITHNVPETCPCLIPELIGCF*PAVVLL Trigger: GAGGAGAACTACAGCAGGCCAGAAGCACCCAATGAG...CTCAGGGATGAGACATGGACAGGTCTCTGGAACGTTATGGGTAATGAGCCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR TCA 90 bp | CGTTGTCATGGTCGCCATCATAGAACTCATTGGGTGCTTCTGGCCTGCTGTAGTGTCCAGATACTGGCGTaGGTTCTGATTCTCGATGCG | + |
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Preference number: 4 (lower is better) Translates to: RCHGRHHRTHWVLLACCSVQILA*VLILDA Trigger: CGCATCGAGAATCAGAACTCACGCCAGTATCTGGAC...ACTACAGCAGGCCAGAAGCACCCAATGAGTTCTATGATGGCGACCATGACAACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236756.2 |
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| CDS-3UTR GCA 90 bp | TTTCAGAGAGCCACGCCTTCCTCCCCTCAGGTTCACCTTGCATGGAAGCAAGAACTCTTGGTGAAACCCTaGATATTGGTGGGGCTGACT | + |
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Preference number: 4 (lower is better) Translates to: FQRATPSSPQVHLAWKQELLVKP*ILVGLT Trigger: AGTCAGCCCCACCAATATGCAGGGTTTCACCAAGAG...TTCTTGCTTCCATGCAAGGTGAACCTGAGGGGAGGAAGGCGTGGCTCTCTGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR CCA 90 bp | TTCACCAGAGTTAGTAAACACCCTGGGGGTACCCAGTTCAGACCTGGGGAAACCGCGATGAGGTTTCATTaGGTGTCCAGCTCCATAGTG | + |
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Preference number: 4 (lower is better) Translates to: FTRVSKHPGGTQFRPGETAMRFH*VSSSIV Trigger: CACTATGGAGCTGGACACCCAATGAAACCTCATCGC...GGTTTCCCCAGGTCTGAACTGGGTACCCCCAGGGTGTTTACTAACTCTGGTGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR TCA 90 bp | TCCAAACCCTTCACCAGAGTTAGTAAACACCCTGGGGGTACCCAGTTCAGACCTTCAAATTTCTTGGCATaGTGTAGACCACCGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: SKPFTRVSKHPGGTQFRPSNFLA*CRPPAQ Trigger: CTGGGCCGGTGGTCTACATCATGCCAAGAAATTTGA...AGGTCTGAACTGGGTACCCCCAGGGTGTTTACTAACTCTGGTGAAGGGTTTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR TCA 90 bp | CCTTCACCAGAGTTAGTAAACACCCTGGGGGTACCCAGTTCAGACCTGGGGAAACATCTGGATGGAGTGTaGAATCTGGGGCAAAGTACT | + |
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Preference number: 4 (lower is better) Translates to: PSPELVNTLGVPSSDLGKHLDGV*NLGQST Trigger: AGTACTTTGCCCCAGATTTCACACTCCATCCAGATG...TTTCCCCAGGTCTGAACTGGGTACCCCCAGGGTGTTTACTAACTCTGGTGAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR GCA 90 bp | GGTTCACCTTGCATGGAAGCAAGAACTGTAGTAGGGGAACCCAGAAGGAAGTCACTCCATAGTGGAAGTTaGCCACATCGGGGTCGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSPCMEARTVVGEPRRKSLHSGS*PHRGRR Trigger: TCTACGACCCCGATGTGGGCAACTTCCACTATGGAG...TGACTTCCTTCTGGGTTCCCCTACTACAGTTCTTGCTTCCATGCAAGGTGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR CCA 90 bp | CCTTGCATGGAAGCAAGAACTGTAGTAGGGGAACCCAGAAGGAAGTCAGAGGTGAAGTCCTGGAAACACTaGGCAGTCATCACCCACGTT | + |
|
Preference number: 4 (lower is better) Translates to: PCMEARTVVGEPRRKSEVKSWKH*AVITHV Trigger: AACGTGGGTGATGACTGCCCAGTGTTTCCAGGACTT...CACCTCTGACTTCCTTCTGGGTTCCCCTACTACAGTTCTTGCTTCCATGCAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR CCA 90 bp | CATCTGCAGTTAAGGTTTCAGAGAGCCACGCCTTCCTCCCCTCAGGTTCACCTTAGGCCTCAAATTTCTTaGCATGATGTAGACCACCGG | + |
|
Preference number: 4 (lower is better) Translates to: HLQLRFQRATPSSPQVHLRPQIS*HDVDHR Trigger: CCGGTGGTCTACATCATGCCAAGAAATTTGAGGCCT...AAGGTGAACCTGAGGGGAGGAAGGCGTGGCTCTCTGAAACCTTAACTGCAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR CCA 90 bp | TTTCAGAGAGCCACGCCTTCCTCCCCTCAGGTTCACCTTGCATGGAAGCAAGAACATCATAGAACTCATTaGGTGCTTCTGGCCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FQRATPSSPQVHLAWKQEHHRTH*VLLACC Trigger: ACAGCAGGCCAGAAGCACCCAATGAGTTCTATGATG...TTCTTGCTTCCATGCAAGGTGAACCTGAGGGGAGGAAGGCGTGGCTCTCTGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR CCA 90 bp | GCACGTCGGCTGGTAGAAGTCCACCACCTGGCTGATGACTGGCTGGAAAAGGTGAAGTCCTGGAAACACTaGGGATCATCTTCTTATAGA | + |
|
Preference number: 4 (lower is better) Translates to: ARRLVEVHHLADDWLEKVKSWKH*GSSSYR Trigger: TCTATAAGAAGATGATCCCCAGTGTTTCCAGGACTT...CACCTTTTCCAGCCAGTCATCAGCCAGGTGGTGGACTTCTACCAGCCGACGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235700.2 |
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| CDS-3UTR GCA 90 bp | TTTCAGAGAGCCACGCCTTCCTCCCCTCAGGTTCACCTTGCATGGAAGCAAGAAAATCTGGACACTGGGTaGATGGTTCAGCATCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FQRATPSSPQVHLAWKQENLDTG*MVQHLQ Trigger: TTGAAGATGCTGAACCATGCACCCAGTGTCCAGATT...TTCTTGCTTCCATGCAAGGTGAACCTGAGGGGAGGAAGGCGTGGCTCTCTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR GCA 90 bp | CATATGGTTTCCAAACCCTTCACCAGAGTTAGTAAACACCCTGGGGGTACCCAGATACGTCAGGAGGTCTaGCGGGACATCATGAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: HMVSKPFTRVSKHPGGTQIRQEV*RDIMNL Trigger: CAGATTCATGATGTCCCGGCAGACCTCCTGACGTAT...CTGGGTACCCCCAGGGTGTTTACTAACTCTGGTGAAGGGTTTGGAAACCATATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR CCA 90 bp | GGGCACATTGAGACAATAGTAGCGGCCACTCTCTGCTCCAACTTCATACATGTCGCGATGAGGTTTCATTaGGTGTCCAGCTCCATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GHIETIVAATLCSNFIHVAMRFH*VSSSIV Trigger: CACTATGGAGCTGGACACCCAATGAAACCTCATCGC...GACATGTATGAAGTTGGAGCAGAGAGTGGCCGCTACTATTGTCTCAATGTGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235700.2 |
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| CDS-3UTR CCA 90 bp | ACCACAGAGGTGACAAGGAACTCTTGGGGACACAGCATCCATGCTGCTCTAAATGCGATGAGGTTTCATTaGGTGTCCAGCTCCATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TTEVTRNSWGHSIHAALNAMRFH*VSSSIV Trigger: CACTATGGAGCTGGACACCCAATGAAACCTCATCGC...ATTTAGAGCAGCATGGATGCTGTGTCCCCAAGAGTTCCTTGTCACCTCTGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236756.2 |
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| CDS-3UTR CCA 90 bp | CATGCTGCTCTAAATCTCCACATCACTTTCCTTGTCGTTGTCATGGTCGCCATCGCGGGTGCTGACATCTaGATGGAGTGTGAAATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HAALNLHITFLVVVMVAIAGADI*MECEIW Trigger: CCAGATTTCACACTCCATCCAGATGTCAGCACCCGC...GATGGCGACCATGACAACGACAAGGAAAGTGATGTGGAGATTTAGAGCAGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236756.2 |
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| CDS-3UTR CCA 90 bp | CATGCTGCTCTAAATCTCCACATCACTTTCCTTGTCGTTGTCATGGTCGCCATCATTGTCTGGCGGATCTaGTCCAGATACTGGCGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HAALNLHITFLVVVMVAIIVWRI*SRYWRE Trigger: CTCACGCCAGTATCTGGACCAGATCCGCCAGACAAT...GATGGCGACCATGACAACGACAAGGAAAGTGATGTGGAGATTTAGAGCAGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236756.2 |
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| CDS-3UTR CCA 90 bp | GGCTCATTACCCATAACGTTCCAGAGACCTGTCCATGTCTCATCCCTGAGAGGGTGGACACTGGGTGCATaGTTCAGCATCTTCAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GSLPITFQRPVHVSSLRGWTLGA*FSIFKF Trigger: AAACTTGAAGATGCTGAACCATGCACCCAGTGTCCA...CCCTCTCAGGGATGAGACATGGACAGGTCTCTGGAACGTTATGGGTAATGAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR TCA 90 bp | CATCTGCAGTTAAGGTTTCAGAGAGCCACGCCTTCCTCCCCTCAGGTTCACCTTCAATTACTATGTCATTaGCATAGCAGAAGCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HLQLRFQRATPSSPQVHLQLLCH*HSRSQR Trigger: CCTCTGGCTTCTGCTATGTCAATGACATAGTAATTG...AAGGTGAACCTGAGGGGAGGAAGGCGTGGCTCTCTGAAACCTTAACTGCAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR GCA 90 bp | ATTGAGACAATAGTAGCGGCCACTCTCTGCTCCAACTTCATACATGTCACCTGTCTCCATAGTGGAAGTTaGCCACATCGGGGTCGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: IETIVAATLCSNFIHVTCLHSGS*PHRGRR Trigger: TCTACGACCCCGATGTGGGCAACTTCCACTATGGAG...ACAGGTGACATGTATGAAGTTGGAGCAGAGAGTGGCCGCTACTATTGTCTCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235700.2 |
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| CDS-3UTR GCA 90 bp | CATCACTTTCCTTGTCGTTGTCATGGTCGCCATCATAGAACTCATTGGGTGCTTCTCCATAGTGGAAGTTaGCCACATCGGGGTCGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: HHFPCRCHGRHHRTHWVLLHSGS*PHRGRR Trigger: TCTACGACCCCGATGTGGGCAACTTCCACTATGGAG...AAGCACCCAATGAGTTCTATGATGGCGACCATGACAACGACAAGGAAAGTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236756.2 |
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| CDS-3UTR GCA 90 bp | ACTTCATCTGCAGTTAAGGTTTCAGAGAGCCACGCCTTCCTCCCCTCAGGTTCAATAGAACTCATTGGGTaGTTCTGGCCTGCTGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TSSAVKVSESHAFLPSGSIELIG*FWPAVV Trigger: AACTACAGCAGGCCAGAAGCACCCAATGAGTTCTAT...TGAACCTGAGGGGAGGAAGGCGTGGCTCTCTGAAACCTTAACTGCAGATGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR CCA 90 bp | GAGGGACAATCATCAGGCCGTGAGAGTTTGAGGGAAAGGGGAGTTAATTCTAGACACCTGGCTGATGACTaGCTGGAAAAGGTGCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: EGQSSGRESLRERGVNSRHLADD*LEKVLV Trigger: TACAAGCACCTTTTCCAGCCAGTCATCAGCCAGGTG...TCTAGAATTAACTCCCCTTTCCCTCAAACTCTCACGGCCTGATGATTGTCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR TCA 90 bp | GCCACTCTCTGCTCCAACTTCATACATGTCACCTGTTCCAGGAAAGAAGTAATTGTCAATGCCAGGCGATaGGGTTTCATTGGGTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ATLCSNFIHVTCSRKEVIVNARR*GFIGCP Trigger: TGGACACCCAATGAAACCTCATCGCCTGGCATTGAC...AATTACTTCTTTCCTGGAACAGGTGACATGTATGAAGTTGGAGCAGAGAGTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235700.2 |
||
| CDS-3UTR TCA 90 bp | CATCACTTTCCTTGTCGTTGTCATGGTCGCCATCATAGAACTCATTGGGTGCTTGCTGAGACACCAGAGTaGATCCCATGGCTTTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: HHFPCRCHGRHHRTHWVLAETPE*IPWLSD Trigger: ATCAGAAAGCCATGGGATTCACTCTGGTGTCTCAGC...AAGCACCCAATGAGTTCTATGATGGCGACCATGACAACGACAAGGAAAGTGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236756.2 |
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| CDS-3UTR TCA 90 bp | GAAAGGGGAGTTAATTCTAGAACCACATATGGTTTCCAAACCCTTCACCAGAGTCTCGTAAGGGCACATTaGGACAATAGTAGCGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ERGVNSRTTYGFQTLHQSLVRAH*DNSSGH Trigger: GTGGCCGCTACTATTGTCTCAATGTGCCCTTACGAG...ACTCTGGTGAAGGGTTTGGAAACCATATGTGGTTCTAGAATTAACTCCCCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR CCA 90 bp | GGTTCACCTTGCATGGAAGCAAGAACTGTAGTAGGGGAACCCAGAAGGAAGTCAATGGAGTGTGAAATCTaGGGCAAAGTACTCGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GSPCMEARTVVGEPRRKSMECEI*GKVLEV Trigger: TACTTCGAGTACTTTGCCCCAGATTTCACACTCCAT...TGACTTCCTTCTGGGTTCCCCTACTACAGTTCTTGCTTCCATGCAAGGTGAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR CCA 90 bp | ACCACAGAGGTGACAAGGAACTCTTGGGGACACAGCATCCATGCTGCTCTAAATATGGAGTGTGAAATCTaGGGCAAAGTACTCGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: TTEVTRNSWGHSIHAALNMECEI*GKVLEV Trigger: TACTTCGAGTACTTTGCCCCAGATTTCACACTCCAT...ATTTAGAGCAGCATGGATGCTGTGTCCCCAAGAGTTCCTTGTCACCTCTGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236756.2 |
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| CDS-3UTR GCA 90 bp | CAAACTTTCATCTCTAACAGTCTCTGTGTTGGAAGGACAGAAGGAACAAATGAGGTAGCGGCCACTCTCTaGTCCAACTTCATACATGTC | + |
|
Preference number: 4 (lower is better) Translates to: QTFISNSLCVGRTEGTNEVAATL*SNFIHV Trigger: GACATGTATGAAGTTGGAGCAGAGAGTGGCCGCTAC...CTCATTTGTTCCTTCTGTCCTTCCAACACAGAGACTGTTAGAGATGAAAGTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR GCA 90 bp | GAAAGGGGAGTTAATTCTAGAACCACATATGGTTTCCAAACCCTTCACCAGAGTAACTCTGGTCATCAATaGCATCTCGTAAGGGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: ERGVNSRTTYGFQTLHQSNSGHQ*HLVRAH Trigger: ATGTGCCCTTACGAGATGGCATTGATGACCAGAGTT...ACTCTGGTGAAGGGTTTGGAAACCATATGTGGTTCTAGAATTAACTCCCCTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR CCA 90 bp | CAAACTTTCATCTCTAACAGTCTCTGTGTTGGAAGGACAGAAGGAACAAATGAGCATGAATCTGGACACTaGGTGCATGGTTCAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: QTFISNSLCVGRTEGTNEHESGH*VHGSAS Trigger: AGATGCTGAACCATGCACCCAGTGTCCAGATTCATG...CTCATTTGTTCCTTCTGTCCTTCCAACACAGAGACTGTTAGAGATGAAAGTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR CCA 90 bp | CAAACTTTCATCTCTAACAGTCTCTGTGTTGGAAGGACAGAAGGAACAAATGAGTTTTCAAAGATTGTCTaGCGGATCTGGTCCAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: QTFISNSLCVGRTEGTNEFSKIV*RIWSRY Trigger: GTATCTGGACCAGATCCGCCAGACAATCTTTGAAAA...CTCATTTGTTCCTTCTGTCCTTCCAACACAGAGACTGTTAGAGATGAAAGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR CAA 90 bp | GCACGTCGGCTGGTAGAAGTCCACCACCTGGCTGATGACTGGCTGGAAAAGGTGTGTTGTTTAGCTGTGTaGCTCCTTGCAGAGATGCGC | + |
|
Preference number: 5 (lower is better) Translates to: ARRLVEVHHLADDWLEKVCCLAV*LLAEMR Trigger: GCGCATCTCTGCAAGGAGCAACACAGCTAAACAACA...CACCTTTTCCAGCCAGTCATCAGCCAGGTGGTGGACTTCTACCAGCCGACGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235700.2 |
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| CDS-3UTR CAA 90 bp | GTTAAGGTTTCAGAGAGCCACGCCTTCCTCCCCTCAGGTTCACCTTGCATGGAAGTGAAACCCTGCATATaGGTGGGGCTGACTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VKVSESHAFLPSGSPCMEVKPCI*VGLTLC Trigger: GCAGAGAGTCAGCCCCACCAATATGCAGGGTTTCAC...TTCCATGCAAGGTGAACCTGAGGGGAGGAAGGCGTGGCTCTCTGAAACCTTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR CAA 90 bp | CTGGGGCTCATTACCCATAACGTTCCAGAGACCTGTCCATGTCTCATCCCTGAGAGACCACCGGCCCAGTaGATGGCAATATCACAGATC | + |
|
Preference number: 5 (lower is better) Translates to: LGLITHNVPETCPCLIPERPPAQ*MAISQI Trigger: GATCTGTGATATTGCCATCAACTGGGCCGGTGGTCT...CTCAGGGATGAGACATGGACAGGTCTCTGGAACGTTATGGGTAATGAGCCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS TCA 90 bp | GCCTCGTCAGTCCTGTCATACGTCAGGAGGTCTGCCGGGACATCATaGATCTGGACACTGGGTGCATGGTTCAGCATCTTCAAGTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ASSVLSYVRRSAGTS*IWTLGAWFSIFKFS Trigger: TGAAAACTTGAAGATGCTGAACCATGCACCCAGTGTCCAGATTCATGATGTCCCGGCAGACCTCCTGACGTATGACAGGACTGACGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR CAA 90 bp | ACCTGGGGAAACCATACTTTCCTTCCCACCACAGAGGTGACAAGGAACTCTTGGTGTTGTTTAGCTGTGTaGCTCCTTGCAGAGATGCGC | + |
|
Preference number: 5 (lower is better) Translates to: TWGNHTFLPTTEVTRNSWCCLAV*LLAEMR Trigger: GCGCATCTCTGCAAGGAGCAACACAGCTAAACAACA...CCAAGAGTTCCTTGTCACCTCTGTGGTGGGAAGGAAAGTATGGTTTCCCCAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR CAA 90 bp | GGCTCATTACCCATAACGTTCCAGAGACCTGTCCATGTCTCATCCCTGAGAGGGAAGGCATTAAGGCTCTaGGTGAAACCCTGCATATTG | + |
|
Preference number: 5 (lower is better) Translates to: GSLPITFQRPVHVSSLRGKALRL*VKPCIL Trigger: CAATATGCAGGGTTTCACCAAGAGCCTTAATGCCTT...CCCTCTCAGGGATGAGACATGGACAGGTCTCTGGAACGTTATGGGTAATGAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR CAA 90 bp | GGTTCACCTTGCATGGAAGCAAGAACTGTAGTAGGGGAACCCAGAAGGAAGTCACAGTCATCACCCACGTaGAAGGCATTAAGGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GSPCMEARTVVGEPRRKSQSSPT*KALRLL Trigger: CAAGAGCCTTAATGCCTTCAACGTGGGTGATGACTG...TGACTTCCTTCTGGGTTCCCCTACTACAGTTCTTGCTTCCATGCAAGGTGAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR CAA 90 bp | GTTAAGGTTTCAGAGAGCCACGCCTTCCTCCCCTCAGGTTCACCTTGCATGGAATCAAGTTTTCAAAGATaGTCTGGCGGATCTGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VKVSESHAFLPSGSPCMESSFQR*SGGSGP Trigger: TGGACCAGATCCGCCAGACAATCTTTGAAAACTTGA...TTCCATGCAAGGTGAACCTGAGGGGAGGAAGGCGTGGCTCTCTGAAACCTTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS-3UTR CAA 90 bp | TTAGTAAACACCCTGGGGGTACCCAGTTCAGACCTGGGGAAACCATACTTTCCTTCCACATCACTTTCCTaGTCGTTGTCATGGTCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LVNTLGVPSSDLGKPYFPSTSLS*SLSWSP Trigger: TGGCGACCATGACAACGACAAGGAAAGTGATGTGGA...AGGAAAGTATGGTTTCCCCAGGTCTGAACTGGGTACCCCCAGGGTGTTTACTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS TCA 90 bp | GAATCCCATGGCTTTCTGATCTCCTCTCCGAGGCCTGGTAAGGCTTaGAGACGATCATCTTCTTATAGAGACCATAATGCAGGACTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: ESHGFLISSPRPGKA*RRSSSYRDHNAGLG Trigger: GCCTAGTCCTGCATTATGGTCTCTATAAGAAGATGATCGTCTTCAAGCCTTACCAGGCCTCGGAGAGGAGATCAGAAAGCCATGGGATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236756.2 |
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| CDS GCA 90 bp | ATACGTCAGGAGGTCTGCCGGGACATCATGAATCTGGACACTGGGTaGATGGTTCAGCATCTTCAAGTTTTCAAAGATTGTCTGGCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: IRQEVCRDIMNLDTG*MVQHLQVFKDCLAD Trigger: ATCCGCCAGACAATCTTTGAAAACTTGAAGATGCTGAACCATGCACCCAGTGTCCAGATTCATGATGTCCCGGCAGACCTCCTGACGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS CCA 90 bp | TGTCATACGTCAGGAGGTCTGCCGGGACATCATGAATCTGGACACTaGGTGCATGGTTCAGCATCTTCAAGTTTTCAAAGATTGTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: CHTSGGLPGHHESGH*VHGSASSSFQRLSG Trigger: GCCAGACAATCTTTGAAAACTTGAAGATGCTGAACCATGCACCCAGTGTCCAGATTCATGATGTCCCGGCAGACCTCCTGACGTATGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS CCA 90 bp | CTGATTCTCGATGCGGGTGCTGACATCTGGATGGAGTGTGAAATCTaGGGCAAAGTACTCGAAGTATTCACTATAGGGAAGTTCCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: LILDAGADIWMECEI*GKVLEVFTIGKFLT Trigger: AGTGAGGAACTTCCCTATAGTGAATACTTCGAGTACTTTGCCCCAGATTTCACACTCCATCCAGATGTCAGCACCCGCATCGAGAATCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS CCA 90 bp | CTGATTCTCGATGCGGGTGCTGACATCTGGATGGAGTGTGAAATCTaGGGCAAAGTACTCGAAGTATTCTTAGAGATGAGAAGCAATTGG | + |
|
Preference number: 5 (lower is better) Translates to: LILDAGADIWMECEI*GKVLEVFLEMRSNW Trigger: CCAATTGCTTCTCATCTCTAAGAATACTTCGAGTACTTTGCCCCAGATTTCACACTCCATCCAGATGTCAGCACCCGCATCGAGAATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236756.2 |
||
| CDS-3UTR CAA 90 bp | ACCTGGGGAAACCATACTTTCCTTCCCACCACAGAGGTGACAAGGAACTCTTGGGCAATATCACAGATCTaGTTGTTTAGCTGTGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: TWGNHTFLPTTEVTRNSWAISQI*LFSCVA Trigger: AGCAACACAGCTAAACAACAAGATCTGTGATATTGC...CCAAGAGTTCCTTGTCACCTCTGTGGTGGGAAGGAAAGTATGGTTTCCCCAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
||
| CDS-3UTR CAA 90 bp | CCTTGCATGGAAGCAAGAACTGTAGTAGGGGAACCCAGAAGGAAGTCAGAGGTGACCAGGAGAGGGATATaGAAACTCTTGACATATTCA | + |
|
Preference number: 5 (lower is better) Translates to: PCMEARTVVGEPRRKSEVTRRGI*KLLTYS Trigger: TGAATATGTCAAGAGTTTCAATATCCCTCTCCTGGT...CACCTCTGACTTCCTTCTGGGTTCCCCTACTACAGTTCTTGCTTCCATGCAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
||
| CDS TCA 90 bp | GTACTCGAAGTATTCTTAGAGATGAGAAGCAATTGGGAGAGGGGATaGACAAGAGTATGGCTGAGACACCAGAGTGAATCCCATGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VLEVFLEMRSNWERG*TRVWLRHQSESHGF Trigger: AAAGCCATGGGATTCACTCTGGTGTCTCAGCCATACTCTTGTTCATCCCCTCTCCCAATTGCTTCTCATCTCTAAGAATACTTCGAGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236756.2 |
||
| CDS-3UTR CAA 90 bp | TTAGTAAACACCCTGGGGGTACCCAGTTCAGACCTGGGGAAACCATACTTTCCTGGGATATTGAAACTCTaGACATATTCAACACATTCC | + |
|
Preference number: 5 (lower is better) Translates to: LVNTLGVPSSDLGKPYFPGILKL*TYSTHS Trigger: GGAATGTGTTGAATATGTCAAGAGTTTCAATATCCC...AGGAAAGTATGGTTTCCCCAGGTCTGAACTGGGTACCCCCAGGGTGTTTACTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
||
| CDS CCA 72 bp | TGCGCCTGTGTAACGGGAGCAGAACTCGAAAAGTCCTaGAAACACTGGGCAGTCATCACCCACGTTGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: CACVTGAELEKS*KHWAVITHVEG Trigger: GCCTTCAACGTGGGTGATGACTGCCCAGTGTTTCCAGGACTTTTCGAGTTCTGCTCCCGTTACACAGGCGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS TCA 72 bp | GAGGGGATGAACAAGAGTATGGCTGAGACACCAGAGTaGATCCCATGGCTTTCTGATCTCCTCTCCGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: EGMNKSMAETPE*IPWLSDLLSEA Trigger: GGCCTCGGAGAGGAGATCAGAAAGCCATGGGATTCACTCTGGTGTCTCAGCCATACTCTTGTTCATCCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236756.2 |
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| CDS GCA 72 bp | GAGGTTTCATTGGGTGTCCAGCTCCATAGTGGAAGTTaGCCACATCGGGGTCGTAGAAATACGCCACGGTCT | + |
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Preference number: 6 (lower is better) Translates to: EVSLGVQLHSGS*PHRGRRNTPRS Trigger: AGACCGTGGCGTATTTCTACGACCCCGATGTGGGCAACTTCCACTATGGAGCTGGACACCCAATGAAACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043498.9 ENSMUST00000235700.2 ENSMUST00000236756.2 |
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| CDS GCA 72 bp | CCCACGTTGAAGGCATTAAGGCTCTTGGTGAAACCCTaGATATTGGTGGGGCTGACTCTCTGCAGGAAGTCG | + |
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Preference number: 6 (lower is better) Translates to: PTLKALRLLVKP*ILVGLTLCRKS Trigger: CGACTTCCTGCAGAGAGTCAGCCCCACCAATATGCAGGGTTTCACCAAGAGCCTTAATGCCTTCAACGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS CAA 72 bp | GGGCAGTCATCACCCACGTTGAAGGCATTAAGGCTCTaGGTGAAACCCTGCATATTGGTGGGGCTGACTCTC | + |
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Preference number: 6 (lower is better) Translates to: GQSSPTLKALRL*VKPCILVGLTL Trigger: GAGAGTCAGCCCCACCAATATGCAGGGTTTCACCAAGAGCCTTAATGCCTTCAACGTGGGTGATGACTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS CAA 90 bp | GGAAACACTGGGCAGTCATCACCCACGTTGAAGGCATTAAGGCTCTaGGTGAAACCCTGCATATTGGTGGGGCTGACTCTCTGCAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: GNTGQSSPTLKALRL*VKPCILVGLTLCRK Trigger: CTTCCTGCAGAGAGTCAGCCCCACCAATATGCAGGGTTTCACCAAGAGCCTTAATGCCTTCAACGTGGGTGATGACTGCCCAGTGTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS CAA 90 bp | CTCTTGACATATTCAACACATTCCCCATGTCCTCGAATGCTGAGATaGAAGCAGCCTAATCGATCACAGCCCAGGGAGTCAGCGCCACAC | + |
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Preference number: 6 (lower is better) Translates to: LLTYSTHSPCPRMLR*KQPNRSQPRESAPH Trigger: GTGTGGCGCTGACTCCCTGGGCTGTGATCGATTAGGCTGCTTCAATCTCAGCATTCGAGGACATGGGGAATGTGTTGAATATGTCAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS CAA 72 bp | CTAGGCTATGAGTCAATGCCAGGCGATGAGGTTTCATaGGGTGTCCAGCTCCATAGTGGAAGTTGCCCACAT | + |
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Preference number: 6 (lower is better) Translates to: LGYESMPGDEVS*GVQLHSGSCPH Trigger: ATGTGGGCAACTTCCACTATGGAGCTGGACACCCAATGAAACCTCATCGCCTGGCATTGACTCATAGCCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043498.9 ENSMUST00000235700.2 ENSMUST00000236756.2 |
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| CDS CCA 72 bp | GATGCGGGTGCTGACATCTGGATGGAGTGTGAAATCTaGGGCAAAGTACTCGAAGTATTCACTATAGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: DAGADIWMECEI*GKVLEVFTIGK Trigger: CTTCCCTATAGTGAATACTTCGAGTACTTTGCCCCAGATTTCACACTCCATCCAGATGTCAGCACCCGCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS CCA 72 bp | TCAGGAGGTCTGCCGGGACATCATGAATCTGGACACTaGGTGCATGGTTCAGCATCTTCAAGTTTTCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: SGGLPGHHESGH*VHGSASSSFQR Trigger: TCTTTGAAAACTTGAAGATGCTGAACCATGCACCCAGTGTCCAGATTCATGATGTCCCGGCAGACCTCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS CCA 72 bp | TGCGCCTGTGTAACGGGAGCAGAACTCGAAAAGTCCTaGAAACACTGGGGATCATCTTCTTATAGAGACCAT | + |
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Preference number: 6 (lower is better) Translates to: CACVTGAELEKS*KHWGSSSYRDH Trigger: ATGGTCTCTATAAGAAGATGATCCCCAGTGTTTCCAGGACTTTTCGAGTTCTGCTCCCGTTACACAGGCGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235700.2 |
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| CDS CAA 72 bp | AAAAGTCCTGGAAACACTGGGCAGTCATCACCCACGTaGAAGGCATTAAGGCTCTTGGTGAAACCCTGCATA | + |
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Preference number: 6 (lower is better) Translates to: KSPGNTGQSSPT*KALRLLVKPCI Trigger: TATGCAGGGTTTCACCAAGAGCCTTAATGCCTTCAACGTGGGTGATGACTGCCCAGTGTTTCCAGGACTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS CAA 72 bp | TATTCAACACATTCCCCATGTCCTCGAATGCTGAGATaGAAGCAGCCTAATCGATCACAGCCCAGGGAGTCA | + |
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Preference number: 6 (lower is better) Translates to: YSTHSPCPRMLR*KQPNRSQPRES Trigger: TGACTCCCTGGGCTGTGATCGATTAGGCTGCTTCAATCTCAGCATTCGAGGACATGGGGAATGTGTTGAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS TCA 72 bp | GGCTTTCTGATCTCCTCTCCGAGGCCTGGTAAGGCTTaGAGACGATCATCTTCTTATAGAGACCATAATGCA | + |
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Preference number: 6 (lower is better) Translates to: GFLISSPRPGKA*RRSSSYRDHNA Trigger: TGCATTATGGTCTCTATAAGAAGATGATCGTCTTCAAGCCTTACCAGGCCTCGGAGAGGAGATCAGAAAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236756.2 |
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| CDS GCA 72 bp | GAGGTCTGCCGGGACATCATGAATCTGGACACTGGGTaGATGGTTCAGCATCTTCAAGTTTTCAAAGATTGT | + |
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Preference number: 6 (lower is better) Translates to: EVCRDIMNLDTG*MVQHLQVFKDC Trigger: ACAATCTTTGAAAACTTGAAGATGCTGAACCATGCACCCAGTGTCCAGATTCATGATGTCCCGGCAGACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS CCA 72 bp | GATGCGGGTGCTGACATCTGGATGGAGTGTGAAATCTaGGGCAAAGTACTCGAAGTATTCTTAGAGATGAGA | + |
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Preference number: 6 (lower is better) Translates to: DAGADIWMECEI*GKVLEVFLEMR Trigger: TCTCATCTCTAAGAATACTTCGAGTACTTTGCCCCAGATTTCACACTCCATCCAGATGTCAGCACCCGCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236756.2 |
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| CDS CAA 72 bp | CCACCTCCCAGTACCAGGAGAGGGATATTGAAACTCTaGACATATTCAACACATTCCCCATGTCCTCGAATG | + |
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Preference number: 6 (lower is better) Translates to: PPPSTRRGILKL*TYSTHSPCPRM Trigger: CATTCGAGGACATGGGGAATGTGTTGAATATGTCAAGAGTTTCAATATCCCTCTCCTGGTACTGGGAGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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| CDS TCA 72 bp | GTATTCTTAGAGATGAGAAGCAATTGGGAGAGGGGATaGACAAGAGTATGGCTGAGACACCAGAGTGAATCC | + |
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Preference number: 6 (lower is better) Translates to: VFLEMRSNWERG*TRVWLRHQSES Trigger: GGATTCACTCTGGTGTCTCAGCCATACTCTTGTTCATCCCCTCTCCCAATTGCTTCTCATCTCTAAGAATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236756.2 |
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| CDS TCA 72 bp | CAAATTTCTTGGCATGATGTAGACCACCGGCCCAGTTaGTGGCAATATCACAGATCTTGTTGTTTAGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: QISWHDVDHRPS*WQYHRSCCLAV Trigger: CACAGCTAAACAACAAGATCTGTGATATTGCCATCAACTGGGCCGGTGGTCTACATCATGCCAAGAAATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043498.9 |
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