Pregenerated sensors for HDAC11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034245Ensembl transcript IDs: ENSMUST00000041736.11, ENSMUST00000143621.8, ENSMUST00000155007.2, ENSMUST00000204776.2
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TACTCCAGAGGCCCCTCCCTGTGGCTGGAGCTAAGCTGTCCTCCCTaGCTCTTGATGGCCTGCCTGCTTCCCACATGGGCTCCTCCCTGG | + |
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Preference number: 1 (lower is better) Translates to: YSRGPSLWLELSCPP*LLMACLLPTWAPPW Trigger: CCAGGGAGGAGCCCATGTGGGAAGCAGGCAGGCCATCAAGAGTCAGGGAGGACAGCTTAGCTCCAGCCACAGGGAGGGGCCTCTGGAGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR GCA 90 bp | CCCCTGTGCCCTTGGTTATGCTGCCAATCTCTGGCTAGGGGTGGCTaGTTTCCTGCCTACGTCACGGAGGGCCCTGGCTGTCCCTTCAGG | + |
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Preference number: 1 (lower is better) Translates to: PLCPWLCCQSLARGG*FPAYVTEGPGCPFR Trigger: CCTGAAGGGACAGCCAGGGCCCTCCGTGACGTAGGCAGGAAAGCAGCCACCCCTAGCCAGAGATTGGCAGCATAACCAAGGGCACAGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR CCA 90 bp | CCCACATCCTCTTACCCCTGTGCCCTTGGTTATGCTGCCAATCTCTaGCTAGGGGTGGCTGCTTTCCTGCCTACGTCACGGAGGGCCCTG | + |
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Preference number: 1 (lower is better) Translates to: PTSSYPCALGYAANL*LGVAAFLPTSRRAL Trigger: CAGGGCCCTCCGTGACGTAGGCAGGAAAGCAGCCACCCCTAGCCAGAGATTGGCAGCATAACCAAGGGCACAGGGGTAAGAGGATGTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR GCA 90 bp | ACCCAGCTGGCCCACATCCTCTTACCCCTGTGCCCTTGGTTATGCTaGCAATCTCTGGCTAGGGGTGGCTGCTTTCCTGCCTACGTCACG | + |
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Preference number: 1 (lower is better) Translates to: TQLAHILLPLCPWLC*QSLARGGCFPAYVT Trigger: CGTGACGTAGGCAGGAAAGCAGCCACCCCTAGCCAGAGATTGGCAGCATAACCAAGGGCACAGGGGTAAGAGGATGTGGGCCAGCTGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR CCA 90 bp | CAGGAGGAAACCCAGCTGGCCCACATCCTCTTACCCCTGTGCCCTTaGTTATGCTGCCAATCTCTGGCTAGGGGTGGCTGCTTTCCTGCC | + |
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Preference number: 1 (lower is better) Translates to: QEETQLAHILLPLCP*LCCQSLARGGCFPA Trigger: GGCAGGAAAGCAGCCACCCCTAGCCAGAGATTGGCAGCATAACCAAGGGCACAGGGGTAAGAGGATGTGGGCCAGCTGGGTTTCCTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR GCA 90 bp | GAAACCCAGCTGGCCCACATCCTCTTACCCCTGTGCCCTTGGTTATaGTGCCAATCTCTGGCTAGGGGTGGCTGCTTTCCTGCCTACGTC | + |
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Preference number: 1 (lower is better) Translates to: ETQLAHILLPLCPWL*CQSLARGGCFPAYV Trigger: GACGTAGGCAGGAAAGCAGCCACCCCTAGCCAGAGATTGGCAGCATAACCAAGGGCACAGGGGTAAGAGGATGTGGGCCAGCTGGGTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR CCA 90 bp | CAGGACTACTACCTGTTAGCTGAGAACCCAGTGCCCCCTGGAGGCTaGCTATGGAAACTCCTCAGACCCACAGGCACCAACGTCCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: QDYYLLAENPVPPGG*LWKLLRPTGTNVQE Trigger: CTCCTGGACGTTGGTGCCTGTGGGTCTGAGGAGTTTCCATAGCCAGCCTCCAGGGGGCACTGGGTTCTCAGCTAACAGGTAGTAGTCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR CCA 90 bp | TACCTTCGCTGCCCTCCCTCTAGCAAGCCCCACCTAGGACTAGCTTaGCCACCAGCCTCCATCTCATTTCTATCTGCAGGGCCTTGCCTT | + |
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Preference number: 1 (lower is better) Translates to: YLRCPPSSKPHLGLA*PPASISFLSAGPCL Trigger: AAGGCAAGGCCCTGCAGATAGAAATGAGATGGAGGCTGGTGGCCAAGCTAGTCCTAGGTGGGGCTTGCTAGAGGGAGGGCAGCGAAGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR GCA 90 bp | CCACCTAGGACTAGCTTGGCCACCAGCCTCCATCTCATTTCTATCTaGAGGGCCTTGCCTTCTCTCCATCCTGGTCAGCAGCCCCTTAAA | + |
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Preference number: 1 (lower is better) Translates to: PPRTSLATSLHLISI*RALPSLHPGQQPLK Trigger: TTTAAGGGGCTGCTGACCAGGATGGAGAGAAGGCAAGGCCCTGCAGATAGAAATGAGATGGAGGCTGGTGGCCAAGCTAGTCCTAGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR GCA 90 bp | GGTACCTCCAGTCAGAGGCAAAGAGGCCATGACAGAGGGGTGTGGTaGTGCACTATTAGTACTGTGGGGTCTGGTCCAGGTCAGTGGTTT | + |
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Preference number: 1 (lower is better) Translates to: GTSSQRQRGHDRGVW*CTISTVGSGPGQWF Trigger: AAACCACTGACCTGGACCAGACCCCACAGTACTAATAGTGCAGCACCACACCCCTCTGTCATGGCCTCTTTGCCTCTGACTGGAGGTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR CCA 90 bp | GTGTGGTGCTGCACTATTAGTACTGTGGGGTCTGGTCCAGGTCAGTaGTTTAGACAACTGGTGACTCTGGCATCCTCCCGACTCCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: VWCCTISTVGSGPGQ*FRQLVTLASSRLQQ Trigger: CTGCTGGAGTCGGGAGGATGCCAGAGTCACCAGTTGTCTAAACCACTGACCTGGACCAGACCCCACAGTACTAATAGTGCAGCACCACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR CCA 90 bp | TGCAAGTTGAGGATGGAGTCGGCGATAATACGGGCTGTGCGCTTCTaGTACCCACCCGAGGTCACCATGAGGATGGGTATATCATGGGCT | + |
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Preference number: 1 (lower is better) Translates to: CKLRMESAIIRAVRF*YPPEVTMRMGISWA Trigger: AGCCCATGATATACCCATCCTCATGGTGACCTCGGGTGGGTACCAGAAGCGCACAGCCCGTATTATCGCCGACTCCATCCTCAACTTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155007.2 |
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| 3UTR GCA 90 bp | ACCTCCAGTCAGAGGCAAAGAGGCCATGACAGAGGGGTGTGGTGCTaGACTATTAGTACTGTGGGGTCTGGTCCAGGTCAGTGGTTTAGA | + |
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Preference number: 1 (lower is better) Translates to: TSSQRQRGHDRGVWC*TISTVGSGPGQWFR Trigger: TCTAAACCACTGACCTGGACCAGACCCCACAGTACTAATAGTGCAGCACCACACCCCTCTGTCATGGCCTCTTTGCCTCTGACTGGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR GCA 90 bp | CTAGCTTGGCCACCAGCCTCCATCTCATTTCTATCTGCAGGGCCTTaGCTTCTCTCCATCCTGGTCAGCAGCCCCTTAAAAACTCCAGTT | + |
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Preference number: 1 (lower is better) Translates to: LAWPPASISFLSAGP*LLSILVSSPLKTPV Trigger: AACTGGAGTTTTTAAGGGGCTGCTGACCAGGATGGAGAGAAGGCAAGGCCCTGCAGATAGAAATGAGATGGAGGCTGGTGGCCAAGCTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR GCA 90 bp | CTGGAGCCTGAATGGCACTCAGACAAACTCCACAATGACAAACTGTaGTGTCACCACTCCCCAATGTCCTGGGAGGTACCTCCAGTCAGA | + |
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Preference number: 1 (lower is better) Translates to: LEPEWHSDKLHNDKL*CHHSPMSWEVPPVR Trigger: TCTGACTGGAGGTACCTCCCAGGACATTGGGGAGTGGTGACAGCACAGTTTGTCATTGTGGAGTTTGTCTGAGTGCCATTCAGGCTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR-3UTR TCA 90 bp | GGACTCAGCTCTTCCACCCCAAAGGCCCAGAGACCCTTGGGCACCTGGTGGGGAGTCCTCCCTGACTCTTaGTGGCCTGCCTGCTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: GLSSSTPKAQRPLGTWWGVLPDS*WPACFP Trigger: TGGGAAGCAGGCAGGCCATCAAGAGTCAGGGAGGAC...TCCCCACCAGGTGCCCAAGGGTCTCTGGGCCTTTGGGGTGGAAGAGCTGAGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041736.11 ENSMUST00000155007.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCAGCTGTCTTCACAGCAACAAACACAGGCGGGTGGGCGGGTGGATGGGGTGGGCTCCTGCTCTTCCTaGCCCTCCACACTCACTGGC | + |
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Preference number: 2 (lower is better) Translates to: WQLSSQQQTQAGGRVDGVGSCSS*PSTLTG Trigger: GCCAGTGAGTGTGGAGGGGCAGGAAGAGCAGGAGCC...CACCCCATCCACCCGCCCACCCGCCTGTGTTTGTTGCTGTGAAGACAGCTGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041736.11 ENSMUST00000155007.2 |
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| 3UTR-3UTR GCA 90 bp | CCACACTCACTGGCAGCTGTCTTCACAGCAACAAACACAGGCGGGTGGGCGGGTGGCTCCTGCTCTTCCTaGCCCTCCACACTCACTGGC | + |
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Preference number: 2 (lower is better) Translates to: PHSLAAVFTATNTGGWAGGSCSS*PSTLTG Trigger: GCCAGTGAGTGTGGAGGGGCAGGAAGAGCAGGAGCC...ACCCGCCCACCCGCCTGTGTTTGTTGCTGTGAAGACAGCTGCCAGTGAGTGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041736.11 ENSMUST00000155007.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCCCCAGGTCATGCAAGTTGAGGATGGAGTCGGCGATAATACGGGCTGTGCGACAAACACAGGCGGGTaGGCGGGTGGATGGGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: EPQVMQVEDGVGDNTGCATNTGG*AGGWGG Trigger: CCCACCCCATCCACCCGCCCACCCGCCTGTGTTTGT...CGCACAGCCCGTATTATCGCCGACTCCATCCTCAACTTGCATGACCTGGGGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155007.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTCACCACTCCCCAATGTCCTGGGAGGTACCTCCAGTCAGAGGCAAAGAGGCGCACCTGGTGGGGAGTaGAGGAGTGGCCAGCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: LSPLPNVLGGTSSQRQRGAPGGE*RSGQQG Trigger: GCCTTGCTGGCCACTCCTCCACTCCCCACCAGGTGC...GCCTCTTTGCCTCTGACTGGAGGTACCTCCCAGGACATTGGGGAGTGGTGACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR-3UTR CCA 90 bp | TGCCCTTGGTTATGCTGCCAATCTCTGGCTAGGGGTGGCTGCTTTCCTGCCTACACAAACACAGGCGGGTaGGCGGGTGGATGGGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: CPWLCCQSLARGGCFPAYTNTGG*AGGWGG Trigger: CCCACCCCATCCACCCGCCCACCCGCCTGTGTTTGT...GTAGGCAGGAAAGCAGCCACCCCTAGCCAGAGATTGGCAGCATAACCAAGGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR-3UTR CCA 90 bp | CTGCCCCTCCACACTCACTGGCAGCTGTCTTCACAGCAACAAACACAGGCGGGTAGACCCTTGGGCACCTaGTGGGGAGTGGAGGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: LPLHTHWQLSSQQQTQAGRPLGT*WGVEEW Trigger: CCACTCCTCCACTCCCCACCAGGTGCCCAAGGGTCT...ACCCGCCTGTGTTTGTTGCTGTGAAGACAGCTGCCAGTGAGTGTGGAGGGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041736.11 ENSMUST00000155007.2 |
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| 3UTR-3UTR CCA 90 bp | GCCACCAGCCTCCATCTCATTTCTATCTGCAGGGCCTTGCCTTCTCTCCATCCTCCCTTGGGCACCTGGTaGGGAGTGGAGGAGTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: ATSLHLISICRALPSLHPPLGTW*GVEEWP Trigger: TGGCCACTCCTCCACTCCCCACCAGGTGCCCAAGGG...AGGATGGAGAGAAGGCAAGGCCCTGCAGATAGAAATGAGATGGAGGCTGGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR-3UTR CCA 90 bp | CACCTAGGACTAGCTTGGCCACCAGCCTCCATCTCATTTCTATCTGCAGGGCCTAGGCCCAGAGACCCTTaGGCACCTGGTGGGGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: HLGLAWPPASISFLSAGPRPRDP*APGGEW Trigger: CCACTCCCCACCAGGTGCCCAAGGGTCTCTGGGCCT...AGGCCCTGCAGATAGAAATGAGATGGAGGCTGGTGGCCAAGCTAGTCCTAGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR-3UTR CCA 90 bp | GGCCCTTCTTCTGCTGATATGAACAGCAAACGACTCTACTCCAGAGGCCCCTCCAGTGGCCAGCAAGGCTaGCTCCTGCTCTTCCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: GPSSADMNSKRLYSRGPSSGQQG*LLLFLP Trigger: GGGCAGGAAGAGCAGGAGCCAGCCTTGCTGGCCACT...GGAGGGGCCTCTGGAGTAGAGTCGTTTGCTGTTCATATCAGCAGAAGAAGGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR-3UTR GCA 90 bp | GCCACCAGCCTCCATCTCATTTCTATCTGCAGGGCCTTGCCTTCTCTCCATCCTAGCAAGGCTGGCTCCTaGTCTTCCTGCCCCTCCACA | + |
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Preference number: 2 (lower is better) Translates to: ATSLHLISICRALPSLHPSKAGS*SSCPST Trigger: TGTGGAGGGGCAGGAAGAGCAGGAGCCAGCCTTGCT...AGGATGGAGAGAAGGCAAGGCCCTGCAGATAGAAATGAGATGGAGGCTGGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR-3UTR CCA 90 bp | CCCCACATGGTAATGAATATGAGTCCTGTAGTTGGAGCAGATCCAGGGCAGGAGCGTCACGGAGGGCCCTaGCTGTCCCTTCAGGGTCAA | + |
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Preference number: 2 (lower is better) Translates to: PHMVMNMSPVVGADPGQERHGGP*LSLQGQ Trigger: TTGACCCTGAAGGGACAGCCAGGGCCCTCCGTGACG...CTCCTGCCCTGGATCTGCTCCAACTACAGGACTCATATTCATTACCATGTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR-3UTR CCA 90 bp | TGTTCTGTGAGTAGCCGTCAAGGCACAGCACAGGAAAGCAGGGGGATGCCCGAGAGGATGGGTATATCATaGGCTCGGACCACGCGGAAA | + |
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Preference number: 2 (lower is better) Translates to: CSVSSRQGTAQESRGMPERMGIS*ARTTRK Trigger: TTTCCGCGTGGTCCGAGCCCATGATATACCCATCCT...CTCGGGCATCCCCCTGCTTTCCTGTGCTGTGCCTTGACGGCTACTCACAGAACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155007.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCCTTGGTTATGCTGCCAATCTCTGGCTAGGGGTGGCTGCTTTCCTGCCTACGGTCTGTCTGGACCTTaGCTTATTGAGGGGAACCCA | + |
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Preference number: 2 (lower is better) Translates to: CPWLCCQSLARGGCFPAYGLSGP*LIEGNP Trigger: TGGGTTCCCCTCAATAAGTCAAGGTCCAGACAGACC...GTAGGCAGGAAAGCAGCCACCCCTAGCCAGAGATTGGCAGCATAACCAAGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR-3UTR CCA 90 bp | GAGATAAGTTGGGGGCCTTGGGCATCCTCAGTGTTCAACCCCATCATCATAGGGGAACCCAGTGCCCCCTaGAGGCTGGCTATGGAAACT | + |
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Preference number: 2 (lower is better) Translates to: EISWGPWASSVFNPIIIGEPSAP*RLAMET Trigger: AGTTTCCATAGCCAGCCTCCAGGGGGCACTGGGTTC...CCCTATGATGATGGGGTTGAACACTGAGGATGCCCAAGGCCCCCAACTTATCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR-3UTR CCA 90 bp | GGTCCTCAGGAGGCAGGTCTGTCTACCTCAGAACACACAGCAACAACCTGGAGCGAGGGGAACCCAAACTaGAGAATCCCAGCTTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: GPQEAGLSTSEHTATTWSEGNPN*RIPASF Trigger: GAAGGAAGCTGGGATTCTCCAGTTTGGGTTCCCCTC...GCTCCAGGTTGTTGCTGTGTGTTCTGAGGTAGACAGACCTGCCTCCTGAGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR-3UTR TCA 90 bp | GAGGAGATAAGTTGGGGGCCTTGGGCATCCTCAGTGTTCAACCCCATCATCATACTACTACCTGTTAGCTaGGAACCCAGTGCCCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: EEISWGPWASSVFNPIIILLPVS*EPSAPW Trigger: CCAGGGGGCACTGGGTTCTCAGCTAACAGGTAGTAG...TATGATGATGGGGTTGAACACTGAGGATGCCCAAGGCCCCCAACTTATCTCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR-3UTR GCA 90 bp | TCCTGTAGTTGGAGCAGATCCAGGGCAGGAGGAAACCCAGCTGGCCCACATCCTCATCTCATTTCTATCTaGAGGGCCTTGCCTTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: SCSWSRSRAGGNPAGPHPHLISI*RALPSL Trigger: GAGAGAAGGCAAGGCCCTGCAGATAGAAATGAGATG...AGGATGTGGGCCAGCTGGGTTTCCTCCTGCCCTGGATCTGCTCCAACTACAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR CAA 90 bp | ACTAGCTTGGCCACCAGCCTCCATCTCATTTCTATCTGCAGGGCCTaGCCTTCTCTCCATCCTGGTCAGCAGCCCCTTAAAAACTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: TSLATSLHLISICRA*PSLHPGQQPLKNSS Trigger: ACTGGAGTTTTTAAGGGGCTGCTGACCAGGATGGAGAGAAGGCAAGGCCCTGCAGATAGAAATGAGATGGAGGCTGGTGGCCAAGCTAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR-3UTR CCA 90 bp | CAGGTAGACCTTGGGGCCACAGACAAAGATGAAAATTGGGCACTTTGGGTGAGCACAGAGGAGATAAGTTaGGGGCCTTGGGCATCCTCA | + |
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Preference number: 2 (lower is better) Translates to: QVDLGATDKDENWALWVSTEEIS*GPWASS Trigger: TGAGGATGCCCAAGGCCCCCAACTTATCTCCTCTGT...GCTCACCCAAAGTGCCCAATTTTCATCTTTGTCTGTGGCCCCAAGGTCTACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR-3UTR TCA 90 bp | AGCCCAATGGAGATTGTAGCTCACTCAAGGTCTGTGGGGCCACTGTACCTAGATCTCTCCAGACTAAAGTaGGGAAGTAAGCCAACCAGG | + |
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Preference number: 2 (lower is better) Translates to: SPMEIVAHSRSVGPLYLDLSRLK*GSKPTR Trigger: CCTGGTTGGCTTACTTCCTCACTTTAGTCTGGAGAG...ATCTAGGTACAGTGGCCCCACAGACCTTGAGTGAGCTACAATCTCCATTGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR-3UTR TCA 90 bp | GCCACCAGCCTCCATCTCATTTCTATCTGCAGGGCCTTGCCTTCTCTCCATCCTAACGTGTTTTCATGCTaGACAGAGGAGATAAGTTGG | + |
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Preference number: 2 (lower is better) Translates to: ATSLHLISICRALPSLHPNVFSC*TEEISW Trigger: CCAACTTATCTCCTCTGTTCAGCATGAAAACACGTT...AGGATGGAGAGAAGGCAAGGCCCTGCAGATAGAAATGAGATGGAGGCTGGTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR CCA 72 bp | GGGTGGCTGCTTTCCTGCCTACGTCACGGAGGGCCCTaGCTGTCCCTTCAGGGTCAAATGGCCAGAGGGCAG | + |
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Preference number: 3 (lower is better) Translates to: GWLLSCLRHGGP*LSLQGQMARGQ Trigger: CTGCCCTCTGGCCATTTGACCCTGAAGGGACAGCCAGGGCCCTCCGTGACGTAGGCAGGAAAGCAGCCACCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR TCA 72 bp | GGCCCCTCCCTGTGGCTGGAGCTAAGCTGTCCTCCCTaGCTCTTGATGGCCTGCCTGCTTCCCACATGGGCT | + |
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Preference number: 3 (lower is better) Translates to: GPSLWLELSCPP*LLMACLLPTWA Trigger: AGCCCATGTGGGAAGCAGGCAGGCCATCAAGAGTCAGGGAGGACAGCTTAGCTCCAGCCACAGGGAGGGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR TCA 72 bp | GGGCTGTGCGCTTCTGGTACCCACCCGAGGTCACCATaGGGATGGGTATATCATGGGCTCGGACCACGCGGA | + |
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Preference number: 3 (lower is better) Translates to: GLCASGTHPRSP*GWVYHGLGPRG Trigger: TCCGCGTGGTCCGAGCCCATGATATACCCATCCTCATGGTGACCTCGGGTGGGTACCAGAAGCGCACAGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155007.2 |
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| 3UTR GCA 72 bp | CACAGCACAGGAAAGCAGGGGGATGCCCGAGTTCTGTaGCGAGACGCAGGGAAACTCAGGCCCAATGAGCCC | + |
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Preference number: 3 (lower is better) Translates to: HSTGKQGDARVL*RDAGKLRPNEP Trigger: GGGCTCATTGGGCCTGAGTTTCCCTGCGTCTCGGCACAGAACTCGGGCATCCCCCTGCTTTCCTGTGCTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155007.2 |
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| 3UTR GCA 72 bp | CCTTGGTTATGCTGCCAATCTCTGGCTAGGGGTGGCTaGTTTCCTGCCTACGTCACGGAGGGCCCTGGCTGT | + |
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Preference number: 3 (lower is better) Translates to: PWLCCQSLARGG*FPAYVTEGPGC Trigger: ACAGCCAGGGCCCTCCGTGACGTAGGCAGGAAAGCAGCCACCCCTAGCCAGAGATTGGCAGCATAACCAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR CCA 72 bp | ACCCAGCTGGCCCACATCCTCTTACCCCTGTGCCCTTaGTTATGCTGCCAATCTCTGGCTAGGGGTGGCTGC | + |
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Preference number: 3 (lower is better) Translates to: TQLAHILLPLCP*LCCQSLARGGC Trigger: GCAGCCACCCCTAGCCAGAGATTGGCAGCATAACCAAGGGCACAGGGGTAAGAGGATGTGGGCCAGCTGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR TCA 72 bp | CCAACCAGGTCGGGGAGGGCCCTTCTTCTGCTGATATaGACAGCAAACGACTCTACTCCAGAGGCCCCTCCC | + |
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Preference number: 3 (lower is better) Translates to: PTRSGRALLLLI*TANDSTPEAPP Trigger: GGGAGGGGCCTCTGGAGTAGAGTCGTTTGCTGTTCATATCAGCAGAAGAAGGGCCCTCCCCGACCTGGTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR TCA 72 bp | CACCAACGTCCAGGAGGGGACCTCTCCAGACTAAAGTaGGGAAGTAAGCCAACCAGGTCGGGGAGGGCCCTT | + |
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Preference number: 3 (lower is better) Translates to: HQRPGGDLSRLK*GSKPTRSGRAL Trigger: AAGGGCCCTCCCCGACCTGGTTGGCTTACTTCCTCACTTTAGTCTGGAGAGGTCCCCTCCTGGACGTTGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR-3UTR CAA 90 bp | AGCCCAATGGAGATTGTAGCTCACTCAAGGTCTGTGGGGCCACTGTACCTAGATAAGGCCCAGAGACCCTaGGGCACCTGGTGGGGAGTG | + |
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Preference number: 3 (lower is better) Translates to: SPMEIVAHSRSVGPLYLDKAQRP*GTWWGV Trigger: CACTCCCCACCAGGTGCCCAAGGGTCTCTGGGCCTT...ATCTAGGTACAGTGGCCCCACAGACCTTGAGTGAGCTACAATCTCCATTGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR TCA 72 bp | TGGGGTCTGGTCCAGGTCAGTGGTTTAGACAACTGGTaGCTCTGGCATCCTCCCGACTCCAGCAGAGGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: WGLVQVSGLDNW*LWHPPDSSRGS Trigger: ACTCCCTCTGCTGGAGTCGGGAGGATGCCAGAGTCACCAGTTGTCTAAACCACTGACCTGGACCAGACCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
||
| 3UTR GCA 72 bp | GTCTGTGGGGCCACTGTACCTAGATGTTACCTTCGCTaGCCTCCCTCTAGCAAGCCCCACCTAGGACTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: VCGATVPRCYLR*PPSSKPHLGLA Trigger: AGCTAGTCCTAGGTGGGGCTTGCTAGAGGGAGGGCAGCGAAGGTAACATCTAGGTACAGTGGCCCCACAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
||
| 3UTR GCA 72 bp | CTGGCCCACATCCTCTTACCCCTGTGCCCTTGGTTATaGTGCCAATCTCTGGCTAGGGGTGGCTGCTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LAHILLPLCPWL*CQSLARGGCFP Trigger: AGGAAAGCAGCCACCCCTAGCCAGAGATTGGCAGCATAACCAAGGGCACAGGGGTAAGAGGATGTGGGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
||
| 3UTR GCA 72 bp | GAGGAAACCCAGCTGGCCCACATCCTCTTACCCCTGTaGCCTTGGTTATGCTGCCAATCTCTGGCTAGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: EETQLAHILLPL*PWLCCQSLARG Trigger: ACCCCTAGCCAGAGATTGGCAGCATAACCAAGGGCACAGGGGTAAGAGGATGTGGGCCAGCTGGGTTTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
||
| 3UTR CCA 72 bp | TACCTGTTAGCTGAGAACCCAGTGCCCCCTGGAGGCTaGCTATGGAAACTCCTCAGACCCACAGGCACCAAC | + |
|
Preference number: 3 (lower is better) Translates to: YLLAENPVPPGG*LWKLLRPTGTN Trigger: GTTGGTGCCTGTGGGTCTGAGGAGTTTCCATAGCCAGCCTCCAGGGGGCACTGGGTTCTCAGCTAACAGGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
||
| 3UTR CCA 72 bp | TGCCCTCCCTCTAGCAAGCCCCACCTAGGACTAGCTTaGCCACCAGCCTCCATCTCATTTCTATCTGCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: CPPSSKPHLGLA*PPASISFLSAG Trigger: CCCTGCAGATAGAAATGAGATGGAGGCTGGTGGCCAAGCTAGTCCTAGGTGGGGCTTGCTAGAGGGAGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
||
| 3UTR TCA 72 bp | GTAAGCCAACCAGGTCGGGGAGGGCCCTTCTTCTGCTaGTATGAACAGCAAACGACTCTACTCCAGAGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: VSQPGRGGPFFC*YEQQTTLLQRP Trigger: GGGCCTCTGGAGTAGAGTCGTTTGCTGTTCATATCAGCAGAAGAAGGGCCCTCCCCGACCTGGTTGGCTTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
||
| 3UTR TCA 72 bp | GCCTCCCAATCCATACCAGGACTACTACCTGTTAGCTaGGAACCCAGTGCCCCCTGGAGGCTGGCTATGGAA | + |
|
Preference number: 3 (lower is better) Translates to: ASQSIPGLLPVS*EPSAPWRLAME Trigger: TTCCATAGCCAGCCTCCAGGGGGCACTGGGTTCTCAGCTAACAGGTAGTAGTCCTGGTATGGATTGGGAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
||
| 3UTR GCA 72 bp | CAGAGGCAAAGAGGCCATGACAGAGGGGTGTGGTGCTaGACTATTAGTACTGTGGGGTCTGGTCCAGGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: QRQRGHDRGVWC*TISTVGSGPGQ Trigger: CTGACCTGGACCAGACCCCACAGTACTAATAGTGCAGCACCACACCCCTCTGTCATGGCCTCTTTGCCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
||
| 3UTR CCA 72 bp | TACCCACCCGAGGTCACCATGAGGATGGGTATATCATaGGCTCGGACCACGCGGAAAACCACTTCATCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: YPPEVTMRMGIS*ARTTRKTTSSL Trigger: GAGGGATGAAGTGGTTTTCCGCGTGGTCCGAGCCCATGATATACCCATCCTCATGGTGACCTCGGGTGGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155007.2 |
||
| 3UTR CCA 72 bp | AGGATGGAGTCGGCGATAATACGGGCTGTGCGCTTCTaGTACCCACCCGAGGTCACCATGAGGATGGGTATA | + |
|
Preference number: 3 (lower is better) Translates to: RMESAIIRAVRF*YPPEVTMRMGI Trigger: TATACCCATCCTCATGGTGACCTCGGGTGGGTACCAGAAGCGCACAGCCCGTATTATCGCCGACTCCATCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155007.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGTAGACCTTGGGGCCACAGACAAAGATGAAAATTGGGCACTTTGGGTGAGCCCACCTAGGACTAGCTaGGCCACCAGCCTCCATCTC | + |
|
Preference number: 3 (lower is better) Translates to: QVDLGATDKDENWALWVSPPRTS*ATSLHL Trigger: GAGATGGAGGCTGGTGGCCAAGCTAGTCCTAGGTGG...GCTCACCCAAAGTGCCCAATTTTCATCTTTGTCTGTGGCCCCAAGGTCTACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
||
| 3UTR GCA 72 bp | AGTCAGAGGCAAAGAGGCCATGACAGAGGGGTGTGGTaGTGCACTATTAGTACTGTGGGGTCTGGTCCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: SQRQRGHDRGVW*CTISTVGSGPG Trigger: ACCTGGACCAGACCCCACAGTACTAATAGTGCAGCACCACACCCCTCTGTCATGGCCTCTTTGCCTCTGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
||
| 3UTR CCA 72 bp | TCCAGTCAGAGGCAAAGAGGCCATGACAGAGGGGTGTaGTGCTGCACTATTAGTACTGTGGGGTCTGGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: SSQRQRGHDRGV*CCTISTVGSGP Trigger: TGGACCAGACCCCACAGTACTAATAGTGCAGCACCACACCCCTCTGTCATGGCCTCTTTGCCTCTGACTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
||
| 3UTR-3UTR CAA 90 bp | TGCCCTTGGTTATGCTGCCAATCTCTGGCTAGGGGTGGCTGCTTTCCTGCCTACCTGGACCTTGACTTATaGAGGGGAACCCAAACTGGA | + |
|
Preference number: 3 (lower is better) Translates to: CPWLCCQSLARGGCFPAYLDLDL*RGTQTG Trigger: TCCAGTTTGGGTTCCCCTCAATAAGTCAAGGTCCAG...GTAGGCAGGAAAGCAGCCACCCCTAGCCAGAGATTGGCAGCATAACCAAGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
||
| 3UTR GCA 72 bp | CCACCAGCCTCCATCTCATTTCTATCTGCAGGGCCTTaGCTTCTCTCCATCCTGGTCAGCAGCCCCTTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: PPASISFLSAGP*LLSILVSSPLK Trigger: TTTTAAGGGGCTGCTGACCAGGATGGAGAGAAGGCAAGGCCCTGCAGATAGAAATGAGATGGAGGCTGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
||
| 3UTR CCA 72 bp | AATGACAAACTGTGCTGTCACCACTCCCCAATGTCCTaGGAGGTACCTCCAGTCAGAGGCAAAGAGGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: NDKLCCHHSPMS*EVPPVRGKEAM Trigger: CATGGCCTCTTTGCCTCTGACTGGAGGTACCTCCCAGGACATTGGGGAGTGGTGACAGCACAGTTTGTCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
||
| 3UTR CCA 72 bp | ATACCCCCACATGGTAATGAATATGAGTCCTGTAGTTaGAGCAGATCCAGGGCAGGAGGAAACCCAGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: IPPHGNEYESCS*SRSRAGGNPAG Trigger: GCCAGCTGGGTTTCCTCCTGCCCTGGATCTGCTCCAACTACAGGACTCATATTCATTACCATGTGGGGGTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
||
| 3UTR CCA 72 bp | TGCACTATTAGTACTGTGGGGTCTGGTCCAGGTCAGTaGTTTAGACAACTGGTGACTCTGGCATCCTCCCGA | + |
|
Preference number: 3 (lower is better) Translates to: CTISTVGSGPGQ*FRQLVTLASSR Trigger: TCGGGAGGATGCCAGAGTCACCAGTTGTCTAAACCACTGACCTGGACCAGACCCCACAGTACTAATAGTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
||
| 3UTR CCA 72 bp | ATGACAGAGGGGTGTGGTGCTGCACTATTAGTACTGTaGGGTCTGGTCCAGGTCAGTGGTTTAGACAACTGG | + |
|
Preference number: 3 (lower is better) Translates to: MTEGCGAALLVL*GLVQVSGLDNW Trigger: CCAGTTGTCTAAACCACTGACCTGGACCAGACCCCACAGTACTAATAGTGCAGCACCACACCCCTCTGTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
||
| 3UTR GCA 72 bp | ATGTATACTCGCTTGTCACCCATGAAGTCTCGCTCATaGCCATTGCCCTGGTGGGCATCGAGATCAATGATG | + |
|
Preference number: 3 (lower is better) Translates to: MYTRLSPMKSRS*PLPWWASRSMM Trigger: CATCATTGATCTCGATGCCCACCAGGGCAATGGGCATGAGCGAGACTTCATGGGTGACAAGCGAGTATACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204776.2 |
||
| 3UTR CCA 72 bp | GCAGGTCTGTCTACCTCAGAACACACAGCAACAACCTaGAGCCTGAATGGCACTCAGACAAACTCCACAATG | + |
|
Preference number: 3 (lower is better) Translates to: AGLSTSEHTATT*SLNGTQTNSTM Trigger: CATTGTGGAGTTTGTCTGAGTGCCATTCAGGCTCCAGGTTGTTGCTGTGTGTTCTGAGGTAGACAGACCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
||
| 3UTR CCA 72 bp | TCCATCCTGGTCAGCAGCCCCTTAAAAACTCCAGTTTaGAGGGTCACTCCTGAGCTAAACACTCATCCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: SILVSSPLKTPV*RVTPELNTHPK Trigger: TTTGGGATGAGTGTTTAGCTCAGGAGTGACCCTCCAAACTGGAGTTTTTAAGGGGCTGCTGACCAGGATGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
||
| 3UTR CCA 72 bp | CTTGGGGCCACAGACAAAGATGAAAATTGGGCACTTTaGGTGAGCCCAATGGAGATTGTAGCTCACTCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LGATDKDENWAL*VSPMEIVAHSR Trigger: CCTTGAGTGAGCTACAATCTCCATTGGGCTCACCCAAAGTGCCCAATTTTCATCTTTGTCTGTGGCCCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
||
| 3UTR CCA 72 bp | CAGGTAGACCTTGGGGCCACAGACAAAGATGAAAATTaGGCACTTTGGGTGAGCCCAATGGAGATTGTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: QVDLGATDKDEN*ALWVSPMEIVA Trigger: AGCTACAATCTCCATTGGGCTCACCCAAAGTGCCCAATTTTCATCTTTGTCTGTGGCCCCAAGGTCTACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
||
| 3UTR CCA 72 bp | TACCTCAGAACACACAGCAACAACCTGGAGCCTGAATaGCACTCAGACAAACTCCACAATGACAAACTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: YLRTHSNNLEPE*HSDKLHNDKLC Trigger: GCACAGTTTGTCATTGTGGAGTTTGTCTGAGTGCCATTCAGGCTCCAGGTTGTTGCTGTGTGTTCTGAGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
||
| CDS-3UTR CCA 90 bp | GGACTCAGCTCTTCCACCCCAAAGGCCCAGAGACCCTTGGGCACCTGGTGGGGACCCCACCACGGTCACTaGAGCAGTGGTGGAAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GLSSSTPKAQRPLGTWWGPHHGH*SSGGSH Trigger: GTGGCTTCCACCACTGCTCCAGTGACCGTGGTGGGG...TCCCCACCAGGTGCCCAAGGGTCTCTGGGCCTTTGGGGTGGAAGAGCTGAGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041736.11 ENSMUST00000155007.2 |
||
| CDS-3UTR TCA 90 bp | ACTGGCAGCTGTCTTCACAGCAACAAACACAGGCGGGTGGGCGGGTGGATGGGGCCAGCTTCCCTGCCATaGTGGTGCCTCCAGTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TGSCLHSNKHRRVGGWMGPASLP*WCLQSG Trigger: CCCAGACTGGAGGCACCATCATGGCAGGGAAGCTGG...CCCCATCCACCCGCCCACCCGCCTGTGTTTGTTGCTGTGAAGACAGCTGCCAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
||
| CDS-3UTR TCA 90 bp | GGACTCAGCTCTTCCACCCCAAAGGCCCAGAGACCCTTGGGCACCTGGTGGGGATGGAAGCCACCACCATaGTGGTGCCTCCAGTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GLSSSTPKAQRPLGTWWGWKPPP*WCLQSG Trigger: CCCAGACTGGAGGCACCATCATGGTGGTGGCTTCCA...TCCCCACCAGGTGCCCAAGGGTCTCTGGGCCTTTGGGGTGGAAGAGCTGAGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155007.2 |
||
| CDS-3UTR GCA 90 bp | AGGCACAGCACAGGAAAGCAGGGGGATGCCCGAGTTCTGTGCCGAGACGCAGGGCTCGCTCATGCCCATTaGCCTGGTGGGCATCGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RHSTGKQGDARVLCRDAGLAHAH*PGGHRD Trigger: ATCTCGATGCCCACCAGGGCAATGGGCATGAGCGAG...CCCTGCGTCTCGGCACAGAACTCGGGCATCCCCCTGCTTTCCTGTGCTGTGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155007.2 |
||
| CDS-3UTR GCA 90 bp | TCCACACTCACTGGCAGCTGTCTTCACAGCAACAAACACAGGCGGGTGGGCGGGACCACGTCAGGCAGGTaGTCCTGGAGGGACCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: STLTGSCLHSNKHRRVGGTTSGR*SWRDLL Trigger: CAGGAGGTCCCTCCAGGAGCACCTGCCTGACGTGGT...CCCGCCCACCCGCCTGTGTTTGTTGCTGTGAAGACAGCTGCCAGTGAGTGTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041736.11 ENSMUST00000155007.2 |
||
| CDS-3UTR CCA 90 bp | GGCAGCTGTCTTCACAGCAACAAACACAGGCGGGTGGGCGGGTGGATGGGGTGGCGGTCACTGGAGCAGTaGTGGAAGCCACCACCAACA | + |
|
Preference number: 4 (lower is better) Translates to: GSCLHSNKHRRVGGWMGWRSLEQ*WKPPPT Trigger: TGTTGGTGGTGGCTTCCACCACTGCTCCAGTGACCG...CCACCCCATCCACCCGCCCACCCGCCTGTGTTTGTTGCTGTGAAGACAGCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
||
| CDS-3UTR CCA 90 bp | AGGATGGAGTCGGCGATAATACGGGCTGTGCGCTTCTGGTACCCACCCGAGGTCCCCCACCACGGTCACTaGAGCAGTGGTGGAAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RMESAIIRAVRFWYPPEVPHHGH*SSGGSH Trigger: GTGGCTTCCACCACTGCTCCAGTGACCGTGGTGGGG...GACCTCGGGTGGGTACCAGAAGCGCACAGCCCGTATTATCGCCGACTCCATCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155007.2 |
||
| CDS-3UTR GCA 90 bp | GGACTCAGCTCTTCCACCCCAAAGGCCCAGAGACCCTTGGGCACCTGGTGGGGAAGCCAGTGTGATGTCTaGATAGGCACAGAAGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GLSSSTPKAQRPLGTWWGSQCDV*IGTEAP Trigger: GGGGGCTTCTGTGCCTATGCAGACATCACACTGGCT...TCCCCACCAGGTGCCCAAGGGTCTCTGGGCCTTTGGGGTGGAAGAGCTGAGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041736.11 ENSMUST00000155007.2 |
||
| CDS-3UTR GCA 90 bp | GAGCCCCAGGTCATGCAAGTTGAGGATGGAGTCGGCGATAATACGGGCTGTGCGACCACGTCAGGCAGGTaGTCCTGGAGGGACCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EPQVMQVEDGVGDNTGCATTSGR*SWRDLL Trigger: CAGGAGGTCCCTCCAGGAGCACCTGCCTGACGTGGT...CGCACAGCCCGTATTATCGCCGACTCCATCCTCAACTTGCATGACCTGGGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155007.2 |
||
| CDS-3UTR TCA 90 bp | TGGCAGCTGTCTTCACAGCAACAAACACAGGCGGGTGGGCGGGTGGATGGGGTGCTCGCTTGTCACCCATaGAGTCTCGCTCATGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: WQLSSQQQTQAGGRVDGVLACHP*SLAHAH Trigger: ATGGGCATGAGCGAGACTTCATGGGTGACAAGCGAG...CACCCCATCCACCCGCCCACCCGCCTGTGTTTGTTGCTGTGAAGACAGCTGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041736.11 ENSMUST00000155007.2 |
||
| CDS-3UTR CCA 90 bp | TATGAACAGCAAACGACTCTACTCCAGAGGCCCCTCCCTGTGGCTGGAGCTAAGATGGTGCCTCCAGTCTaGGTCCGCAGGGGCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YEQQTTLLQRPLPVAGAKMVPPV*VRRGLS Trigger: GCTGAGGCCCCTGCGGACCCAGACTGGAGGCACCAT...CTTAGCTCCAGCCACAGGGAGGGGCCTCTGGAGTAGAGTCGTTTGCTGTTCATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
||
| CDS-3UTR TCA 90 bp | AGTAGCCGTCAAGGCACAGCACAGGAAAGCAGGGGGATGCCCGAGTTCTGTGCCACCACTTCAGCTCGTTaGGATAGCGCCTCGTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSRQGTAQESRGMPEFCATTSAR*DSASCA Trigger: TGCACACGAGGCGCTATCTCAACGAGCTGAAGTGGT...GGCACAGAACTCGGGCATCCCCCTGCTTTCCTGTGCTGTGCCTTGACGGCTACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155007.2 |
||
| CDS-3UTR GCA 90 bp | TCCTGTAGTTGGAGCAGATCCAGGGCAGGAGGAAACCCAGCTGGCCCACATCCTCCAGCATCAAAGGGGTaGAGCTTCTCCAGGCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SCSWSRSRAGGNPAGPHPPASKG*SFSRPM Trigger: CATGGGCCTGGAGAAGCTGCACCCCTTTGATGCTGG...AGGATGTGGGCCAGCTGGGTTTCCTCCTGCCCTGGATCTGCTCCAACTACAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
||
| CDS-3UTR GCA 90 bp | TGTTCTGTGAGTAGCCGTCAAGGCACAGCACAGGAAAGCAGGGGGATGCCCGAGCCAGCATCAAAGGGGTaGAGCTTCTCCAGGCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: CSVSSRQGTAQESRGMPEPASKG*SFSRPM Trigger: CATGGGCCTGGAGAAGCTGCACCCCTTTGATGCTGG...CTCGGGCATCCCCCTGCTTTCCTGTGCTGTGCCTTGACGGCTACTCACAGAACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155007.2 |
||
| CDS-3UTR GCA 90 bp | TCCTGTAGTTGGAGCAGATCCAGGGCAGGAGGAAACCCAGCTGGCCCACATCCTGAGCCTCCACCAGCATaGCATCGGACAGCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SCSWSRSRAGGNPAGPHPEPPPA*HRTAAS Trigger: AGAAGCTGCTGTCCGATGGCATGCTGGTGGAGGCTC...AGGATGTGGGCCAGCTGGGTTTCCTCCTGCCCTGGATCTGCTCCAACTACAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
||
| CDS-3UTR GCA 90 bp | GGCAGCTGTCTTCACAGCAACAAACACAGGCGGGTGGGCGGGTGGATGGGGTGGCTCAGCACCTTCCTCTaGACAAGGAAGTTGGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSCLHSNKHRRVGGWMGWLSTFL*TRKLGR Trigger: TCTTCCCAACTTCCTTGTGCAGAGGAAGGTGCTGAG...CCACCCCATCCACCCGCCCACCCGCCTGTGTTTGTTGCTGTGAAGACAGCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041736.11 ENSMUST00000155007.2 |
||
| CDS-3UTR GCA 90 bp | AGGCACAGCACAGGAAAGCAGGGGGATGCCCGAGTTCTGTGCCGAGACGCAGGGCTCAGCACCTTCCTCTaGACAAGGAAGTTGGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RHSTGKQGDARVLCRDAGLSTFL*TRKLGR Trigger: TCTTCCCAACTTCCTTGTGCAGAGGAAGGTGCTGAG...CCCTGCGTCTCGGCACAGAACTCGGGCATCCCCCTGCTTTCCTGTGCTGTGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155007.2 |
||
| CDS-3UTR GCA 90 bp | TCGGCGATAATACGGGCTGTGCGCTTCTGGTACCCACCCGAGGTCACCATGAGGATGAAGTCTCGCTCATaGCCATTGCCCTGGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SAIIRAVRFWYPPEVTMRMKSRS*PLPWWA Trigger: TGCCCACCAGGGCAATGGGCATGAGCGAGACTTCAT...CCTCATGGTGACCTCGGGTGGGTACCAGAAGCGCACAGCCCGTATTATCGCCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155007.2 |
||
| CDS-3UTR CCA 90 bp | ACTGGCAGCTGTCTTCACAGCAACAAACACAGGCGGGTGGGCGGGTGGATGGGGGTGGTGAGTACACGATaGGCCAGCGTTTCTCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TGSCLHSNKHRRVGGWMGVVSTR*ASVSLV Trigger: TACCAGAGAAACGCTGGCCCATCGTGTACTCACCAC...CCCCATCCACCCGCCCACCCGCCTGTGTTTGTTGCTGTGAAGACAGCTGCCAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041736.11 ENSMUST00000155007.2 |
||
| CDS-3UTR TCA 90 bp | CTGTCACCACTCCCCAATGTCCTGGGAGGTACCTCCAGTCAGAGGCAAAGAGGCACCACTTCAGCTCGTTaGGATAGCGCCTCGTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSPLPNVLGGTSSQRQRGTTSAR*DSASCA Trigger: TGCACACGAGGCGCTATCTCAACGAGCTGAAGTGGT...GCCTCTTTGCCTCTGACTGGAGGTACCTCCCAGGACATTGGGGAGTGGTGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
||
| CDS-3UTR TCA 90 bp | TGTTCTGTGAGTAGCCGTCAAGGCACAGCACAGGAAAGCAGGGGGATGCCCGAGCTCGCTTGTCACCCATaGAGTCTCGCTCATGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CSVSSRQGTAQESRGMPELACHP*SLAHAH Trigger: ATGGGCATGAGCGAGACTTCATGGGTGACAAGCGAG...CTCGGGCATCCCCCTGCTTTCCTGTGCTGTGCCTTGACGGCTACTCACAGAACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155007.2 |
||
| CDS-3UTR GCA 90 bp | AGGGGGATGCCCGAGTTCTGTGCCGAGACGCAGGGAAACTCAGGCCCAATGAGCCGTTTCTCTGGTACATaGTGGTACAGCTGTGTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: RGMPEFCAETQGNSGPMSRFSGT*WYSCVA Trigger: CGCAACACAGCTGTACCAGCATGTACCAGAGAAACG...GCTCATTGGGCCTGAGTTTCCCTGCGTCTCGGCACAGAACTCGGGCATCCCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155007.2 |
||
| CDS-3UTR GCA 90 bp | GGCCCTTCTTCTGCTGATATGAACAGCAAACGACTCTACTCCAGAGGCCCCTCCCTCGCTCATGCCCATTaGCCTGGTGGGCATCGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GPSSADMNSKRLYSRGPSLAHAH*PGGHRD Trigger: ATCTCGATGCCCACCAGGGCAATGGGCATGAGCGAG...GGAGGGGCCTCTGGAGTAGAGTCGTTTGCTGTTCATATCAGCAGAAGAAGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
||
| CDS-3UTR CCA 90 bp | GGCCCAATGAGCCCCAGGTCATGCAAGTTGAGGATGGAGTCGGCGATAATACGGGGGCCAGCGTTTCTCTaGTACATGCTGGTACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GPMSPRSCKLRMESAIIRGPAFL*YMLVQL Trigger: CAGCTGTACCAGCATGTACCAGAGAAACGCTGGCCC...CCGTATTATCGCCGACTCCATCCTCAACTTGCATGACCTGGGGCTCATTGGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155007.2 |
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| CDS-3UTR GCA 90 bp | GCCACCAGCCTCCATCTCATTTCTATCTGCAGGGCCTTGCCTTCTCTCCATCCTAGCCAGTGTGATGTCTaGATAGGCACAGAAGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ATSLHLISICRALPSLHPSQCDV*IGTEAP Trigger: GGGGGCTTCTGTGCCTATGCAGACATCACACTGGCT...AGGATGGAGAGAAGGCAAGGCCCTGCAGATAGAAATGAGATGGAGGCTGGTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| CDS-3UTR CCA 90 bp | GGTCCTCAGGAGGCAGGTCTGTCTACCTCAGAACACACAGCAACAACCTGGAGCAGGATGGGTATATCATaGGCTCGGACCACGCGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GPQEAGLSTSEHTATTWSRMGIS*ARTTRK Trigger: TTTCCGCGTGGTCCGAGCCCATGATATACCCATCCT...GCTCCAGGTTGTTGCTGTGTGTTCTGAGGTAGACAGACCTGCCTCCTGAGGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| 3UTR CAA 72 bp | GCCACCAGCCTCCATCTCATTTCTATCTGCAGGGCCTaGCCTTCTCTCCATCCTGGTCAGCAGCCCCTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: ATSLHLISICRA*PSLHPGQQPLK Trigger: TTTAAGGGGCTGCTGACCAGGATGGAGAGAAGGCAAGGCCCTGCAGATAGAAATGAGATGGAGGCTGGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| CDS-3UTR TCA 90 bp | CTGCCCCTCCACACTCACTGGCAGCTGTCTTCACAGCAACAAACACAGGCGGGTCTTCTTTCAGGAAGTTaGTCACCTTGCCCCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPLHTHWQLSSQQQTQAGLLSGS*SPCPIS Trigger: GGAAATGGGGCAAGGTGATCAACTTCCTGAAAGAAG...ACCCGCCTGTGTTTGTTGCTGTGAAGACAGCTGCCAGTGAGTGTGGAGGGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041736.11 ENSMUST00000155007.2 |
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| CDS-3UTR GCA 90 bp | ACCAGCCTCCATCTCATTTCTATCTGCAGGGCCTTGCCTTCTCTCCATCCTGGTATGAAGTCTCGCTCATaGCCATTGCCCTGGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TSLHLISICRALPSLHPGMKSRS*PLPWWA Trigger: TGCCCACCAGGGCAATGGGCATGAGCGAGACTTCAT...ACCAGGATGGAGAGAAGGCAAGGCCCTGCAGATAGAAATGAGATGGAGGCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| CDS-3UTR CCA 90 bp | GAGATAAGTTGGGGGCCTTGGGCATCCTCAGTGTTCAACCCCATCATCATAGGGGGGCCAGCGTTTCTCTaGTACATGCTGGTACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EISWGPWASSVFNPIIIGGPAFL*YMLVQL Trigger: CAGCTGTACCAGCATGTACCAGAGAAACGCTGGCCC...CCCTATGATGATGGGGTTGAACACTGAGGATGCCCAAGGCCCCCAACTTATCTC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| CDS-3UTR TCA 90 bp | AGCAACAACCTGGAGCCTGAATGGCACTCAGACAAACTCCACAATGACAAACTGAGCCACCACCAACATTaGTGGCCCAGCCTCGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SNNLEPEWHSDKLHNDKLSHHQH*WPSLAP Trigger: TGGAGCGAGGCTGGGCCATCAATGTTGGTGGTGGCT...CAGTTTGTCATTGTGGAGTTTGTCTGAGTGCCATTCAGGCTCCAGGTTGTTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| CDS-3UTR TCA 90 bp | AGCCCAATGGAGATTGTAGCTCACTCAAGGTCTGTGGGGCCACTGTACCTAGATGAAACTCAGGCCCAATaGGCCCCAGGTCATGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SPMEIVAHSRSVGPLYLDETQAQ*APGHAS Trigger: ACTTGCATGACCTGGGGCTCATTGGGCCTGAGTTTC...ATCTAGGTACAGTGGCCCCACAGACCTTGAGTGAGCTACAATCTCCATTGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| CDS-3UTR GCA 90 bp | CACCTAGGACTAGCTTGGCCACCAGCCTCCATCTCATTTCTATCTGCAGGGCCTCGTTTCTCTGGTACATaGTGGTACAGCTGTGTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: HLGLAWPPASISFLSAGPRFSGT*WYSCVA Trigger: CGCAACACAGCTGTACCAGCATGTACCAGAGAAACG...AGGCCCTGCAGATAGAAATGAGATGGAGGCTGGTGGCCAAGCTAGTCCTAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| CDS-3UTR GCA 90 bp | GGCCCAATGAGCCCCAGGTCATGCAAGTTGAGGATGGAGTCGGCGATAATACGGATTCCTCATCTTCTGTaGCCCACTCCAATTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: GPMSPRSCKLRMESAIIRIPHLL*PTPIPP Trigger: AGGTGGAATTGGAGTGGGGCACAGAAGATGAGGAAT...CCGTATTATCGCCGACTCCATCCTCAACTTGCATGACCTGGGGCTCATTGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155007.2 |
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| CDS-3UTR CCA 90 bp | CCCCACATGGTAATGAATATGAGTCCTGTAGTTGGAGCAGATCCAGGGCAGGAGGTGGTGAGTACACGATaGGCCAGCGTTTCTCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PHMVMNMSPVVGADPGQEVVSTR*ASVSLV Trigger: TACCAGAGAAACGCTGGCCCATCGTGTACTCACCAC...CTCCTGCCCTGGATCTGCTCCAACTACAGGACTCATATTCATTACCATGTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| CDS-3UTR CCA 90 bp | CAGGTAGACCTTGGGGCCACAGACAAAGATGAAAATTGGGCACTTTGGGTGAGCTCACTGGAGCAGTGGTaGAAGCCACCACCAACATTG | + |
|
Preference number: 4 (lower is better) Translates to: QVDLGATDKDENWALWVSSLEQW*KPPPTL Trigger: CAATGTTGGTGGTGGCTTCCACCACTGCTCCAGTGA...GCTCACCCAAAGTGCCCAATTTTCATCTTTGTCTGTGGCCCCAAGGTCTACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| CDS-3UTR TCA 90 bp | ACTTTGGGTGAGCCCAATGGAGATTGTAGCTCACTCAAGGTCTGTGGGGCCACTCTTCTTTCAGGAAGTTaGTCACCTTGCCCCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLGEPNGDCSSLKVCGATLLSGS*SPCPIS Trigger: GGAAATGGGGCAAGGTGATCAACTTCCTGAAAGAAG...AGTGGCCCCACAGACCTTGAGTGAGCTACAATCTCCATTGGGCTCACCCAAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| CDS-3UTR GCA 90 bp | CCCCACATGGTAATGAATATGAGTCCTGTAGTTGGAGCAGATCCAGGGCAGGAGATTCCTCATCTTCTGTaGCCCACTCCAATTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: PHMVMNMSPVVGADPGQEIPHLL*PTPIPP Trigger: AGGTGGAATTGGAGTGGGGCACAGAAGATGAGGAAT...CTCCTGCCCTGGATCTGCTCCAACTACAGGACTCATATTCATTACCATGTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| CDS-3UTR CAA 90 bp | GGACTCAGCTCTTCCACCCCAAAGGCCCAGAGACCCTTGGGCACCTGGTGGGGATCTCGCTCATGCCCATaGCCCTGGTGGGCATCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GLSSSTPKAQRPLGTWWGSRSCP*PWWASR Trigger: TCTCGATGCCCACCAGGGCAATGGGCATGAGCGAGA...TCCCCACCAGGTGCCCAAGGGTCTCTGGGCCTTTGGGGTGGAAGAGCTGAGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041736.11 ENSMUST00000155007.2 |
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| CDS GCA 90 bp | TCCAGCACGTCCGTGCCAGCGTTGTACACCACCACGTCAGGCAGGTaGTCCTGGAGGGACCTCCTGACATTCCTCTCCACCTTCTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SSTSVPALYTTTSGR*SWRDLLTFLSTFSR Trigger: TCTGGAGAAGGTGGAGAGGAATGTCAGGAGGTCCCTCCAGGAGCACCTGCCTGACGTGGTGGTGTACAACGCTGGCACGGACGTGCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041736.11 ENSMUST00000155007.2 |
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| CDS-3UTR CAA 90 bp | GAGCCCCAGGTCATGCAAGTTGAGGATGGAGTCGGCGATAATACGGGCTGTGCGACGTCCGTGCCAGCGTaGTACACCACCACGTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: EPQVMQVEDGVGDNTGCATSVPA*YTTTSG Trigger: GCCTGACGTGGTGGTGTACAACGCTGGCACGGACGT...CGCACAGCCCGTATTATCGCCGACTCCATCCTCAACTTGCATGACCTGGGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155007.2 |
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| CDS-3UTR CAA 90 bp | GGTCCTCAGGAGGCAGGTCTGTCTACCTCAGAACACACAGCAACAACCTGGAGCACGTCCGTGCCAGCGTaGTACACCACCACGTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GPQEAGLSTSEHTATTWSTSVPA*YTTTSG Trigger: GCCTGACGTGGTGGTGTACAACGCTGGCACGGACGT...GCTCCAGGTTGTTGCTGTGTGTTCTGAGGTAGACAGACCTGCCTCCTGAGGACC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| CDS CCA 90 bp | ACGTCCGTGCCAGCGTTGTACACCACCACGTCAGGCAGGTGCTCCTaGAGGGACCTCCTGACATTCCTCTCCACCTTCTCCAGATATTCC | + |
|
Preference number: 5 (lower is better) Translates to: TSVPALYTTTSGRCS*RDLLTFLSTFSRYS Trigger: GGAATATCTGGAGAAGGTGGAGAGGAATGTCAGGAGGTCCCTCCAGGAGCACCTGCCTGACGTGGTGGTGTACAACGCTGGCACGGACGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041736.11 ENSMUST00000155007.2 |
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| CDS GCA 90 bp | GCCTTCCACGCGTTCAAACAGGAACTTGATAGCCAGTGTGATGTCTaGATAGGCACAGAAGCCCCCACCACGGTCACTGGAGCAGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: AFHAFKQELDSQCDV*IGTEAPTTVTGAVV Trigger: CACCACTGCTCCAGTGACCGTGGTGGGGGCTTCTGTGCCTATGCAGACATCACACTGGCTATCAAGTTCCTGTTTGAACGCGTGGAAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041736.11 ENSMUST00000155007.2 |
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| CDS-3UTR CAA 90 bp | CCACACTCACTGGCAGCTGTCTTCACAGCAACAAACACAGGCGGGTGGGCGGGTAGGAAGTTGATCACCTaGCCCCATTTCCCAGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: PHSLAAVFTATNTGGWAGRKLIT*PHFPAS Trigger: TGATGCTGGGAAATGGGGCAAGGTGATCAACTTCCT...ACCCGCCCACCCGCCTGTGTTTGTTGCTGTGAAGACAGCTGCCAGTGAGTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041736.11 ENSMUST00000155007.2 |
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| CDS-3UTR CAA 90 bp | AAGCAGGGGGATGCCCGAGTTCTGTGCCGAGACGCAGGGAAACTCAGGCCCAATAGGAAGTTGATCACCTaGCCCCATTTCCCAGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: KQGDARVLCRDAGKLRPNRKLIT*PHFPAS Trigger: TGATGCTGGGAAATGGGGCAAGGTGATCAACTTCCT...ATTGGGCCTGAGTTTCCCTGCGTCTCGGCACAGAACTCGGGCATCCCCCTGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155007.2 |
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| CDS TCA 90 bp | GGGGTGCAGCTTCTCCAGGCCCATGAAGGTGATGTTGTAACGTGGTaGGTACACGATGGGCCAGCGTTTCTCTGGTACATGCTGGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: GVQLLQAHEGDVVTW*VHDGPAFLWYMLVQ Trigger: CTGTACCAGCATGTACCAGAGAAACGCTGGCCCATCGTGTACTCACCACGTTACAACATCACCTTCATGGGCCTGGAGAAGCTGCACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041736.11 ENSMUST00000143621.8 ENSMUST00000155007.2 |
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| CDS TCA 90 bp | CGTTGTACACCACCACGTCAGGCAGGTGCTCCTGGAGGGACCTCCTaGCATTCCTCTCCACCTTCTCCAGATATTCCTCATCTTCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RCTPPRQAGAPGGTS*HSSPPSPDIPHLLC Trigger: GCACAGAAGATGAGGAATATCTGGAGAAGGTGGAGAGGAATGTCAGGAGGTCCCTCCAGGAGCACCTGCCTGACGTGGTGGTGTACAACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041736.11 ENSMUST00000155007.2 |
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| CDS CCA 90 bp | CGCTTCTGGTACCCACCCGAGGTCACCATGAGGATGGGTATATCATaGGCTCGGACCACGCGGAAAACCACTTCATCCCTCTTCACAATG | + |
|
Preference number: 5 (lower is better) Translates to: RFWYPPEVTMRMGIS*ARTTRKTTSSLFTM Trigger: CATTGTGAAGAGGGATGAAGTGGTTTTCCGCGTGGTCCGAGCCCATGATATACCCATCCTCATGGTGACCTCGGGTGGGTACCAGAAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| CDS-3UTR CAA 90 bp | GTCGGCGATAATACGGGCTGTGCGCTTCTGGTACCCACCCGAGGTCACCATGAGATGATGTATACTCGCTaGTCACCCATGAAGTCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: VGDNTGCALLVPTRGHHEMMYTR*SPMKSR Trigger: GCGAGACTTCATGGGTGACAAGCGAGTATACATCAT...CTCATGGTGACCTCGGGTGGGTACCAGAAGCGCACAGCCCGTATTATCGCCGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155007.2 |
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| CDS-3UTR CAA 90 bp | ACATCCATGATGTATACTCGCTTGTCACCCATGAAGTCTCGCTCATGCCCATTGCAAACAGGAACAACATaGATGGCCCAGCCTCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TSMMYTRLSPMKSRSCPLQTGTT*MAQPRS Trigger: GGAGCGAGGCTGGGCCATCAATGTTGTTCCTGTTTG...CAATGGGCATGAGCGAGACTTCATGGGTGACAAGCGAGTATACATCATGGATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204776.2 |
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| CDS-3UTR CAA 90 bp | TCAGGCCCAATGAGCCCCAGGTCATGCAAGTTGAGGATGGAGTCGGCGATAATATCTTCTTTCAGGAAGTaGATCACCTTGCCCCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: SGPMSPRSCKLRMESAIISSFRK*ITLPHF Trigger: GAAATGGGGCAAGGTGATCAACTTCCTGAAAGAAGA...TATTATCGCCGACTCCATCCTCAACTTGCATGACCTGGGGCTCATTGGGCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155007.2 |
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| CDS-3UTR CAA 90 bp | AGCCCAATGGAGATTGTAGCTCACTCAAGGTCTGTGGGGCCACTGTACCTAGATATGATGTATACTCGCTaGTCACCCATGAAGTCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: SPMEIVAHSRSVGPLYLDMMYTR*SPMKSR Trigger: GCGAGACTTCATGGGTGACAAGCGAGTATACATCAT...ATCTAGGTACAGTGGCCCCACAGACCTTGAGTGAGCTACAATCTCCATTGGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| CDS-3UTR CAA 90 bp | AGCCCAATGGAGATTGTAGCTCACTCAAGGTCTGTGGGGCCACTGTACCTAGATTCTTCTTTCAGGAAGTaGATCACCTTGCCCCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: SPMEIVAHSRSVGPLYLDSSFRK*ITLPHF Trigger: GAAATGGGGCAAGGTGATCAACTTCCTGAAAGAAGA...ATCTAGGTACAGTGGCCCCACAGACCTTGAGTGAGCTACAATCTCCATTGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| CDS CCA 72 bp | GCACAGAAGCCCCCACCACGGTCACTGGAGCAGTGGTaGAAGCCACCACCAACATTGATGGCCCAGCCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: AQKPPPRSLEQW*KPPPTLMAQPR Trigger: GCGAGGCTGGGCCATCAATGTTGGTGGTGGCTTCCACCACTGCTCCAGTGACCGTGGTGGGGGCTTCTGTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041736.11 |
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| CDS GCA 72 bp | TCCGTGCCAGCGTTGTACACCACCACGTCAGGCAGGTaGTCCTGGAGGGACCTCCTGACATTCCTCTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: SVPALYTTTSGR*SWRDLLTFLST Trigger: GGTGGAGAGGAATGTCAGGAGGTCCCTCCAGGAGCACCTGCCTGACGTGGTGGTGTACAACGCTGGCACGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041736.11 ENSMUST00000155007.2 |
||
| CDS CCA 72 bp | CCAGCGTTGTACACCACCACGTCAGGCAGGTGCTCCTaGAGGGACCTCCTGACATTCCTCTCCACCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PALYTTTSGRCS*RDLLTFLSTFS Trigger: GGAGAAGGTGGAGAGGAATGTCAGGAGGTCCCTCCAGGAGCACCTGCCTGACGTGGTGGTGTACAACGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041736.11 ENSMUST00000155007.2 |
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| CDS CAA 72 bp | ATCTCACAGCAGATAGAGGTACCCGTGGGGCCAACATaGATGGCCCAGCCTCGCTCCACAGCCAGCTTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: ISQQIEVPVGPT*MAQPRSTASFP Trigger: AGGGAAGCTGGCTGTGGAGCGAGGCTGGGCCATCAATGTTGGCCCCACGGGTACCTCTATCTGCTGTGAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143621.8 |
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| CDS TCA 72 bp | GCTCATGCCCATTGCCCTGGTGGGCATCGAGATCAATaGTGGTGGCTCTGGAGATGCCTTCCACGCGTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: AHAHCPGGHRDQ*WWLWRCLPRVQ Trigger: TTGAACGCGTGGAAGGCATCTCCAGAGCCACCATCATTGATCTCGATGCCCACCAGGGCAATGGGCATGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041736.11 ENSMUST00000155007.2 |
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| CDS CAA 90 bp | ACAACAAATATCTCACAGCAGATAGAGGTACCCGTGGGGCCAACATaGATGGCCCAGCCTCGCTCCACAGCCAGCTTCCCTGCCATGATG | + |
|
Preference number: 6 (lower is better) Translates to: TTNISQQIEVPVGPT*MAQPRSTASFPAMM Trigger: CATCATGGCAGGGAAGCTGGCTGTGGAGCGAGGCTGGGCCATCAATGTTGGCCCCACGGGTACCTCTATCTGCTGTGAGATATTTGTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143621.8 |
||
| CDS GCA 72 bp | GCGTTCAAACAGGAACTTGATAGCCAGTGTGATGTCTaGATAGGCACAGAAGCCCCCACCACGGTCACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: AFKQELDSQCDV*IGTEAPTTVTG Trigger: TCCAGTGACCGTGGTGGGGGCTTCTGTGCCTATGCAGACATCACACTGGCTATCAAGTTCCTGTTTGAACGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041736.11 ENSMUST00000155007.2 |
||
| CDS TCA 72 bp | CTTCTCCAGGCCCATGAAGGTGATGTTGTAACGTGGTaGGTACACGATGGGCCAGCGTTTCTCTGGTACATG | + |
|
Preference number: 6 (lower is better) Translates to: LLQAHEGDVVTW*VHDGPAFLWYM Trigger: CATGTACCAGAGAAACGCTGGCCCATCGTGTACTCACCACGTTACAACATCACCTTCATGGGCCTGGAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041736.11 ENSMUST00000143621.8 ENSMUST00000155007.2 |
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| CDS CAA 72 bp | ATGCCATCGGACAGCAGCTTCTCTTCTTTCAGGAAGTaGATCACCTTGCCCCATTTCCCAGCATCAAAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: MPSDSSFSSFRK*ITLPHFPASKG Trigger: CCCCTTTGATGCTGGGAAATGGGGCAAGGTGATCAACTTCCTGAAAGAAGAGAAGCTGCTGTCCGATGGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041736.11 ENSMUST00000143621.8 ENSMUST00000155007.2 |
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