Pregenerated sensors for HDAC10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062906Ensembl transcript IDs: ENSMUST00000082197.12, ENSMUST00000109347.2
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGGCCCCCTACTGGGCTCCGAAGCATTGCAGCCAAGAGAGCAGCTTaGGCGTTCTGCAGGCCATGGGCAGGCCCCAGTGCCATCAACACC | + |
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Preference number: 1 (lower is better) Translates to: RPPTGLRSIAAKRAA*AFCRPWAGPSAINT Trigger: GGTGTTGATGGCACTGGGGCCTGCCCATGGCCTGCAGAACGCTCAAGCTGCTCTCTTGGCTGCAATGCTTCGGAGCCCAGTAGGGGGCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| 3UTR CCA 90 bp | TTTCTCCATGCAATGCCTGCGCCAGGCTCCTTGCAAGCAGGCGTATaGATTCCTGGCTCGGAGAGAGTGGGGTTTGGGCGCCGCAATGAG | + |
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Preference number: 1 (lower is better) Translates to: FLHAMPAPGSLQAGV*IPGSERVGFGRRNE Trigger: CTCATTGCGGCGCCCAAACCCCACTCTCTCCGAGCCAGGAATCCATACGCCTGCTTGCAAGGAGCCTGGCGCAGGCATTGCATGGAGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| 3UTR GCA 90 bp | CAAGAGAGCAGCTTGAGCGTTCTGCAGGCCATGGGCAGGCCCCAGTaGCATCAACACCATATCAGGCTGGAAACCATAGGCCAAGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: QESSLSVLQAMGRPQ*HQHHIRLETIGQGQ Trigger: CTGCCCTTGGCCTATGGTTTCCAGCCTGATATGGTGTTGATGGCACTGGGGCCTGCCCATGGCCTGCAGAACGCTCAAGCTGCTCTCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| 3UTR GCA 90 bp | GGCCTTCGAGAAAGGACCCAGACTGGGAGGTGTTTCTCCATGCAATaGCTGCGCCAGGCTCCTTGCAAGCAGGCGTATGGATTCCTGGCT | + |
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Preference number: 1 (lower is better) Translates to: GLRERTQTGRCFSMQ*LRQAPCKQAYGFLA Trigger: AGCCAGGAATCCATACGCCTGCTTGCAAGGAGCCTGGCGCAGGCATTGCATGGAGAAACACCTCCCAGTCTGGGTCCTTTCTCGAAGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| 3UTR GCA 90 bp | GGAGTGGCCTTCGAGAAAGGACCCAGACTGGGAGGTGTTTCTCCATaGAATGCCTGCGCCAGGCTCCTTGCAAGCAGGCGTATGGATTCC | + |
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Preference number: 1 (lower is better) Translates to: GVAFEKGPRLGGVSP*NACARLLASRRMDS Trigger: GGAATCCATACGCCTGCTTGCAAGGAGCCTGGCGCAGGCATTGCATGGAGAAACACCTCCCAGTCTGGGTCCTTTCTCGAAGGCCACTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| 3UTR GCA 90 bp | TTCGAGAAAGGACCCAGACTGGGAGGTGTTTCTCCATGCAATGCCTaGGCCAGGCTCCTTGCAAGCAGGCGTATGGATTCCTGGCTCGGA | + |
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Preference number: 1 (lower is better) Translates to: FEKGPRLGGVSPCNA*ARLLASRRMDSWLG Trigger: TCCGAGCCAGGAATCCATACGCCTGCTTGCAAGGAGCCTGGCGCAGGCATTGCATGGAGAAACACCTCCCAGTCTGGGTCCTTTCTCGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| 3UTR CCA 90 bp | CCAGCCGAGCTTTTAGAAACATCAGAGCCTGGATCTCCTCTGGAGTaGCCTTCGAGAAAGGACCCAGACTGGGAGGTGTTTCTCCATGCA | + |
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Preference number: 1 (lower is better) Translates to: PAELLETSEPGSPLE*PSRKDPDWEVFLHA Trigger: TGCATGGAGAAACACCTCCCAGTCTGGGTCCTTTCTCGAAGGCCACTCCAGAGGAGATCCAGGCTCTGATGTTTCTAAAAGCTCGGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| 3UTR CCA 90 bp | AATTTCCAGCGAGCCTCCAGCCGAGCTTTTAGAAACATCAGAGCCTaGATCTCCTCTGGAGTGGCCTTCGAGAAAGGACCCAGACTGGGA | + |
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Preference number: 1 (lower is better) Translates to: NFQRASSRAFRNIRA*ISSGVAFEKGPRLG Trigger: TCCCAGTCTGGGTCCTTTCTCGAAGGCCACTCCAGAGGAGATCCAGGCTCTGATGTTTCTAAAAGCTCGGCTGGAGGCTCGCTGGAAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| 3UTR CAA 90 bp | TCGGCCCCCTACTGGGCTCCGAAGCATTGCAGCCAAGAGAGCAGCTaGAGCGTTCTGCAGGCCATGGGCAGGCCCCAGTGCCATCAACAC | + |
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Preference number: 2 (lower is better) Translates to: SAPYWAPKHCSQESS*SVLQAMGRPQCHQH Trigger: GTGTTGATGGCACTGGGGCCTGCCCATGGCCTGCAGAACGCTCAAGCTGCTCTCTTGGCTGCAATGCTTCGGAGCCCAGTAGGGGGCCGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| 3UTR-3UTR CCA 90 bp | ACCCAGACTGGGAGGTGTTTCTCCATGCAATGCCTGCGCCAGGCTCCTTGCAAGGCGTTCTGCAGGCCATaGGCAGGCCCCAGTGCCATC | + |
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Preference number: 2 (lower is better) Translates to: TQTGRCFSMQCLRQAPCKAFCRP*AGPSAI Trigger: GATGGCACTGGGGCCTGCCCATGGCCTGCAGAACGC...CTTGCAAGGAGCCTGGCGCAGGCATTGCATGGAGAAACACCTCCCAGTCTGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| 3UTR CAA 90 bp | CTTCCACTACAGCTAGAATTCGGCCCCCTACTGGGCTCCGAAGCATaGCAGCCAAGAGAGCAGCTTGAGCGTTCTGCAGGCCATGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: LPLQLEFGPLLGSEA*QPREQLERSAGHGQ Trigger: CTGCCCATGGCCTGCAGAACGCTCAAGCTGCTCTCTTGGCTGCAATGCTTCGGAGCCCAGTAGGGGGCCGAATTCTAGCTGTAGTGGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| 3UTR CAA 90 bp | TTCCTGGCTCGGAGAGAGTGGGGTTTGGGCGCCGCAATGAGACAGTaGTTTCTGCCCACCTTCCACCCATATAACGTAGCCACCCTACCC | + |
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Preference number: 2 (lower is better) Translates to: FLARREWGLGAAMRQ*FLPTFHPYNVATLP Trigger: GGGTAGGGTGGCTACGTTATATGGGTGGAAGGTGGGCAGAAACAACTGTCTCATTGCGGCGCCCAAACCCCACTCTCTCCGAGCCAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| 3UTR-3UTR GCA 90 bp | GAGCTTTTAGAAACATCAGAGCCTGGATCTCCTCTGGAGTGGCCTTCGAGAAAGTGGGCTCCGAAGCATTaGAGCCAAGAGAGCAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: ELLETSEPGSPLEWPSRKWAPKH*SQESSL Trigger: CAAGCTGCTCTCTTGGCTGCAATGCTTCGGAGCCCA...CTTTCTCGAAGGCCACTCCAGAGGAGATCCAGGCTCTGATGTTTCTAAAAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| 3UTR TCA 72 bp | ACTGGGCTCCGAAGCATTGCAGCCAAGAGAGCAGCTTaGGCGTTCTGCAGGCCATGGGCAGGCCCCAGTGCC | + |
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Preference number: 3 (lower is better) Translates to: TGLRSIAAKRAA*AFCRPWAGPSA Trigger: GGCACTGGGGCCTGCCCATGGCCTGCAGAACGCTCAAGCTGCTCTCTTGGCTGCAATGCTTCGGAGCCCAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| 3UTR CCA 72 bp | GCAATGCCTGCGCCAGGCTCCTTGCAAGCAGGCGTATaGATTCCTGGCTCGGAGAGAGTGGGGTTTGGGCGC | + |
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Preference number: 3 (lower is better) Translates to: AMPAPGSLQAGV*IPGSERVGFGR Trigger: GCGCCCAAACCCCACTCTCTCCGAGCCAGGAATCCATACGCCTGCTTGCAAGGAGCCTGGCGCAGGCATTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| 3UTR GCA 72 bp | GGACCCAGACTGGGAGGTGTTTCTCCATGCAATGCCTaGGCCAGGCTCCTTGCAAGCAGGCGTATGGATTCC | + |
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Preference number: 3 (lower is better) Translates to: GPRLGGVSPCNA*ARLLASRRMDS Trigger: GGAATCCATACGCCTGCTTGCAAGGAGCCTGGCGCAGGCATTGCATGGAGAAACACCTCCCAGTCTGGGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| 3UTR GCA 72 bp | AGCTTGAGCGTTCTGCAGGCCATGGGCAGGCCCCAGTaGCATCAACACCATATCAGGCTGGAAACCATAGGC | + |
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Preference number: 3 (lower is better) Translates to: SLSVLQAMGRPQ*HQHHIRLETIG Trigger: GCCTATGGTTTCCAGCCTGATATGGTGTTGATGGCACTGGGGCCTGCCCATGGCCTGCAGAACGCTCAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| 3UTR GCA 72 bp | GAAAGGACCCAGACTGGGAGGTGTTTCTCCATGCAATaGCTGCGCCAGGCTCCTTGCAAGCAGGCGTATGGA | + |
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Preference number: 3 (lower is better) Translates to: ERTQTGRCFSMQ*LRQAPCKQAYG Trigger: TCCATACGCCTGCTTGCAAGGAGCCTGGCGCAGGCATTGCATGGAGAAACACCTCCCAGTCTGGGTCCTTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| 3UTR GCA 72 bp | TTCGAGAAAGGACCCAGACTGGGAGGTGTTTCTCCATaGAATGCCTGCGCCAGGCTCCTTGCAAGCAGGCGT | + |
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Preference number: 3 (lower is better) Translates to: FEKGPRLGGVSP*NACARLLASRR Trigger: ACGCCTGCTTGCAAGGAGCCTGGCGCAGGCATTGCATGGAGAAACACCTCCCAGTCTGGGTCCTTTCTCGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| 3UTR TCA 72 bp | TCCTGGCTCGGAGAGAGTGGGGTTTGGGCGCCGCAATaGGACAGTTGTTTCTGCCCACCTTCCACCCATATA | + |
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Preference number: 3 (lower is better) Translates to: SWLGESGVWAPQ*DSCFCPPSTHI Trigger: TATATGGGTGGAAGGTGGGCAGAAACAACTGTCTCATTGCGGCGCCCAAACCCCACTCTCTCCGAGCCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| 3UTR CCA 72 bp | CGAGCCTCCAGCCGAGCTTTTAGAAACATCAGAGCCTaGATCTCCTCTGGAGTGGCCTTCGAGAAAGGACCC | + |
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Preference number: 3 (lower is better) Translates to: RASSRAFRNIRA*ISSGVAFEKGP Trigger: GGGTCCTTTCTCGAAGGCCACTCCAGAGGAGATCCAGGCTCTGATGTTTCTAAAAGCTCGGCTGGAGGCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| 3UTR CCA 72 bp | CTTTTAGAAACATCAGAGCCTGGATCTCCTCTGGAGTaGCCTTCGAGAAAGGACCCAGACTGGGAGGTGTTT | + |
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Preference number: 3 (lower is better) Translates to: LLETSEPGSPLE*PSRKDPDWEVF Trigger: AAACACCTCCCAGTCTGGGTCCTTTCTCGAAGGCCACTCCAGAGGAGATCCAGGCTCTGATGTTTCTAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| 3UTR CAA 72 bp | TACTGGGCTCCGAAGCATTGCAGCCAAGAGAGCAGCTaGAGCGTTCTGCAGGCCATGGGCAGGCCCCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: YWAPKHCSQESS*SVLQAMGRPQC Trigger: GCACTGGGGCCTGCCCATGGCCTGCAGAACGCTCAAGCTGCTCTCTTGGCTGCAATGCTTCGGAGCCCAGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR TCA 90 bp | CCACTACAGCTAGAATTCGGCCCCCTACTGGGCTCCGAAGCATTGCAGCCAAGATTGGCAGCTGCCCTCTaGCTGTGGTGCCCTGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: PLQLEFGPLLGSEALQPRLAAAL*LWCPGG Trigger: GCCTCCAGGGCACCACAGTCAGAGGGCAGCTGCCAA...TCTTGGCTGCAATGCTTCGGAGCCCAGTAGGGGGCCGAATTCTAGCTGTAGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR GCA 90 bp | CTGGAGTGGCCTTCGAGAAAGGACCCAGACTGGGAGGTGTTTCTCCATGCAATGATCGACCAGCTGCAGTaGAGCCCCCGCTGCCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: LEWPSRKDPDWEVFLHAMIDQLQ*SPRCQP Trigger: CGGCTGGCAGCGGGGGCTGCACTGCAGCTGGTCGAT...CATTGCATGGAGAAACACCTCCCAGTCTGGGTCCTTTCTCGAAGGCCACTCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR TCA 90 bp | AGGACCCAGACTGGGAGGTGTTTCTCCATGCAATGCCTGCGCCAGGCTCCTTGCTCTGACATGGCACCATaGGCCCAAGAAGGGGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: RTQTGRCFSMQCLRQAPCSDMAP*AQEGEV Trigger: CACCTCCCCTTCTTGGGCTCATGGTGCCATGTCAGA...GCAAGGAGCCTGGCGCAGGCATTGCATGGAGAAACACCTCCCAGTCTGGGTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR TCA 90 bp | GGCCCCCTACTGGGCTCCGAAGCATTGCAGCCAAGAGAGCAGCTTGAGCGTTCTCAGGAGGGGGCTCAGTaGATCCTCTGCTACTGCACA | + |
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Preference number: 4 (lower is better) Translates to: GPLLGSEALQPREQLERSQEGAQ*ILCYCT Trigger: TGTGCAGTAGCAGAGGATTCACTGAGCCCCCTCCTG...AGAACGCTCAAGCTGCTCTCTTGGCTGCAATGCTTCGGAGCCCAGTAGGGGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR GCA 90 bp | GGCCCCCTACTGGGCTCCGAAGCATTGCAGCCAAGAGAGCAGCTTGAGCGTTCTTGTGCAGATTGGAGGTaGAGGGCGGAGGCACAGTTG | + |
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Preference number: 4 (lower is better) Translates to: GPLLGSEALQPREQLERSCADWR*RAEAQL Trigger: CAACTGTGCCTCCGCCCTGCACCTCCAATCTGCACA...AGAACGCTCAAGCTGCTCTCTTGGCTGCAATGCTTCGGAGCCCAGTAGGGGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR CCA 90 bp | GGCGTATGGATTCCTGGCTCGGAGAGAGTGGGGTTTGGGCGCCGCAATGAGACACCCAGAGCAGTCGAGTaGCTGTCATGTCCTCGTGGT | + |
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Preference number: 4 (lower is better) Translates to: GVWIPGSERVGFGRRNETPRAVE*LSCPRG Trigger: ACCACGAGGACATGACAGCCACTCGACTGCTCTGGG...TGTCTCATTGCGGCGCCCAAACCCCACTCTCTCCGAGCCAGGAATCCATACGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR CCA 90 bp | GAGAGCAGCTTGAGCGTTCTGCAGGCCATGGGCAGGCCCCAGTGCCATCAACACACCCTCGAAGGCCAGTaGGAGCAGCACATGCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: ESSLSVLQAMGRPQCHQHTLEGQ*EQHMQK Trigger: TTTCTGCATGTGCTGCTCCCACTGGCCTTCGAGGGT...GTGTTGATGGCACTGGGGCCTGCCCATGGCCTGCAGAACGCTCAAGCTGCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| 3UTR CAA 72 bp | CAGCTAGAATTCGGCCCCCTACTGGGCTCCGAAGCATaGCAGCCAAGAGAGCAGCTTGAGCGTTCTGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: QLEFGPLLGSEA*QPREQLERSAG Trigger: GCCTGCAGAACGCTCAAGCTGCTCTCTTGGCTGCAATGCTTCGGAGCCCAGTAGGGGGCCGAATTCTAGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR TCA 90 bp | CAGCTTGAGCGTTCTGCAGGCCATGGGCAGGCCCCAGTGCCATCAACACCATATACACAGAGCACCCTCTaGGCTCTGCGAGCTAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: QLERSAGHGQAPVPSTPYTQSTL*ALRARH Trigger: ATGCCTAGCTCGCAGAGCTCAGAGGGTGCTCTGTGT...ATATGGTGTTGATGGCACTGGGGCCTGCCCATGGCCTGCAGAACGCTCAAGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR CCA 90 bp | CAGCGAGCCTCCAGCCGAGCTTTTAGAAACATCAGAGCCTGGATCTCCTCTGGACTGACTGTGGTGCCCTaGAGGCCTCACCAGGGCAAG | + |
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Preference number: 4 (lower is better) Translates to: QRASSRAFRNIRAWISSGLTVVP*RPHQGK Trigger: CTTGCCCTGGTGAGGCCTCCAGGGCACCACAGTCAG...TCCAGAGGAGATCCAGGCTCTGATGTTTCTAAAAGCTCGGCTGGAGGCTCGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR GCA 90 bp | CCACTACAGCTAGAATTCGGCCCCCTACTGGGCTCCGAAGCATTGCAGCCAAGAGCACCCTCTGAGCTCTaGGAGCTAGGCATCGCTGAA | + |
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Preference number: 4 (lower is better) Translates to: PLQLEFGPLLGSEALQPRAPSEL*ELGIAE Trigger: TTCAGCGATGCCTAGCTCGCAGAGCTCAGAGGGTGC...TCTTGGCTGCAATGCTTCGGAGCCCAGTAGGGGGCCGAATTCTAGCTGTAGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR CCA 90 bp | CAGCTAGAATTCGGCCCCCTACTGGGCTCCGAAGCATTGCAGCCAAGAGAGCAGATGCCCTGGCCATGGTaGACATCCCAGTCGACAATG | + |
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Preference number: 4 (lower is better) Translates to: QLEFGPLLGSEALQPREQMPWPW*TSQSTM Trigger: CATTGTCGACTGGGATGTCCACCATGGCCAGGGCAT...CTGCTCTCTTGGCTGCAATGCTTCGGAGCCCAGTAGGGGGCCGAATTCTAGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR CCA 90 bp | GAGAGCAGCTTGAGCGTTCTGCAGGCCATGGGCAGGCCCCAGTGCCATCAACACTCGTTGAAGATATACTaGATGCCCTGGCCATGGTGG | + |
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Preference number: 4 (lower is better) Translates to: ESSLSVLQAMGRPQCHQHSLKIY*MPWPWW Trigger: CCACCATGGCCAGGGCATCCAGTATATCTTCAACGA...GTGTTGATGGCACTGGGGCCTGCCCATGGCCTGCAGAACGCTCAAGCTGCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR CCA 90 bp | CAGCTAGAATTCGGCCCCCTACTGGGCTCCGAAGCATTGCAGCCAAGAGAGCAGCTGCTACTGCACATGTaGGGCTCTCACCAAGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: QLEFGPLLGSEALQPREQLLLHM*GSHQAD Trigger: GTCTGCTTGGTGAGAGCCCCACATGTGCAGTAGCAG...CTGCTCTCTTGGCTGCAATGCTTCGGAGCCCAGTAGGGGGCCGAATTCTAGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR CCA 90 bp | CCTGGCTCGGAGAGAGTGGGGTTTGGGCGCCGCAATGAGACAGTTGTTTCTGCCTGGCGAGGGCAGTTGTaGTTGCTATGGCATTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: PGSERVGFGRRNETVVSAWRGQL*LLWHFW Trigger: CCAGAAATGCCATAGCAACCACAACTGCCCTCGCCA...GGCAGAAACAACTGTCTCATTGCGGCGCCCAAACCCCACTCTCTCCGAGCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR CCA 90 bp | CAGCGAGCCTCCAGCCGAGCTTTTAGAAACATCAGAGCCTGGATCTCCTCTGGATGGATGCCCTGGCCATaGTGGACATCCCAGTCGACA | + |
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Preference number: 4 (lower is better) Translates to: QRASSRAFRNIRAWISSGWMPWP*WTSQST Trigger: TGTCGACTGGGATGTCCACCATGGCCAGGGCATCCA...TCCAGAGGAGATCCAGGCTCTGATGTTTCTAAAAGCTCGGCTGGAGGCTCGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR CCA 90 bp | ACCCAGACTGGGAGGTGTTTCTCCATGCAATGCCTGCGCCAGGCTCCTTGCAAGATATACTGGATGCCCTaGCCATGGTGGACATCCCAG | + |
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Preference number: 4 (lower is better) Translates to: TQTGRCFSMQCLRQAPCKIYWMP*PWWTSQ Trigger: CTGGGATGTCCACCATGGCCAGGGCATCCAGTATAT...CTTGCAAGGAGCCTGGCGCAGGCATTGCATGGAGAAACACCTCCCAGTCTGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR CCA 90 bp | CCTGGCTCGGAGAGAGTGGGGTTTGGGCGCCGCAATGAGACAGTTGTTTCTGCCATCTGCATCAGACTCTaGGAGAAACGGCCAGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: PGSERVGFGRRNETVVSAICIRL*EKRPEA Trigger: AGCTTCTGGCCGTTTCTCCCAGAGTCTGATGCAGAT...GGCAGAAACAACTGTCTCATTGCGGCGCCCAAACCCCACTCTCTCCGAGCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR CCA 90 bp | TCCACTACAGCTAGAATTCGGCCCCCTACTGGGCTCCGAAGCATTGCAGCCAAGCAGGGCACTCTGACATaGCACCATGAGCCCAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: STTARIRPPTGLRSIAAKQGTLT*HHEPKK Trigger: CTTCTTGGGCTCATGGTGCCATGTCAGAGTGCCCTG...CTTGGCTGCAATGCTTCGGAGCCCAGTAGGGGGCCGAATTCTAGCTGTAGTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR CCA 90 bp | GAGCTTTTAGAAACATCAGAGCCTGGATCTCCTCTGGAGTGGCCTTCGAGAAAGGGGCGGAGGCACAGTTaGTCCAGGAGGGGGCTCAGT | + |
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Preference number: 4 (lower is better) Translates to: ELLETSEPGSPLEWPSRKGRRHS*SRRGLS Trigger: ACTGAGCCCCCTCCTGGACCAACTGTGCCTCCGCCC...CTTTCTCGAAGGCCACTCCAGAGGAGATCCAGGCTCTGATGTTTCTAAAAGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR CCA 90 bp | AGCAGCTTGAGCGTTCTGCAGGCCATGGGCAGGCCCCAGTGCCATCAACACCATGAAACCCTGTGGCAGTaGAGTGGAGAAGTGGAACAT | + |
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Preference number: 4 (lower is better) Translates to: SSLSVLQAMGRPQCHQHHETLWQ*SGEVEH Trigger: ATGTTCCACTTCTCCACTCCACTGCCACAGGGTTTC...ATGGTGTTGATGGCACTGGGGCCTGCCCATGGCCTGCAGAACGCTCAAGCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| 3UTR CAA 72 bp | CGGAGAGAGTGGGGTTTGGGCGCCGCAATGAGACAGTaGTTTCTGCCCACCTTCCACCCATATAACGTAGCC | + |
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Preference number: 4 (lower is better) Translates to: RREWGLGAAMRQ*FLPTFHPYNVA Trigger: GGCTACGTTATATGGGTGGAAGGTGGGCAGAAACAACTGTCTCATTGCGGCGCCCAAACCCCACTCTCTCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR TCA 90 bp | AATTTCCAGCGAGCCTCCAGCCGAGCTTTTAGAAACATCAGAGCCTGGATCTCCGACTCCAGGGCACTCTaGCATGGCACCATGAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: NFQRASSRAFRNIRAWISDSRAL*HGTMSP Trigger: TGGGCTCATGGTGCCATGTCAGAGTGCCCTGGAGTC...GGAGATCCAGGCTCTGATGTTTCTAAAAGCTCGGCTGGAGGCTCGCTGGAAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR TCA 90 bp | GATCTCCTCTGGAGTGGCCTTCGAGAAAGGACCCAGACTGGGAGGTGTTTCTCCAAGACTGACCCTTCTTaGTGGAGCACTCCAGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: DLLWSGLRERTQTGRCFSKTDPS*WSTPGG Trigger: ACCTCCTGGAGTGCTCCATCAAGAAGGGTCAGTCTT...GGAGAAACACCTCCCAGTCTGGGTCCTTTCTCGAAGGCCACTCCAGAGGAGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR GCA 90 bp | GTATGGATTCCTGGCTCGGAGAGAGTGGGGTTTGGGCGCCGCAATGAGACAGTTGTGTCTGCACCATCATaGACACTGACTGTGCTAGGG | + |
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Preference number: 4 (lower is better) Translates to: VWIPGSERVGFGRRNETVVSAPS*TLTVLG Trigger: CCCTAGCACAGTCAGTGTGCATGATGGTGCAGACAC...AACTGTCTCATTGCGGCGCCCAAACCCCACTCTCTCCGAGCCAGGAATCCATAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR CCA 90 bp | CAGCGAGCCTCCAGCCGAGCTTTTAGAAACATCAGAGCCTGGATCTCCTCTGGATCTGGACACTCTGGATaGACTCCAGGGCACTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QRASSRAFRNIRAWISSGSGHSG*TPGHSD Trigger: GTCAGAGTGCCCTGGAGTCCATCCAGAGTGTCCAGA...TCCAGAGGAGATCCAGGCTCTGATGTTTCTAAAAGCTCGGCTGGAGGCTCGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR GCA 90 bp | CAGCGAGCCTCCAGCCGAGCTTTTAGAAACATCAGAGCCTGGATCTCCTCTGGAAGGGCAAGCCCATTGTaGACAGCTCCTGTTAGCACA | + |
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Preference number: 4 (lower is better) Translates to: QRASSRAFRNIRAWISSGRASPL*TAPVST Trigger: TGTGCTAACAGGAGCTGTGCACAATGGGCTTGCCCT...TCCAGAGGAGATCCAGGCTCTGATGTTTCTAAAAGCTCGGCTGGAGGCTCGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR CCA 90 bp | CAGCTTGAGCGTTCTGCAGGCCATGGGCAGGCCCCAGTGCCATCAACACCATATTCTGCTTGGCATGTTTaGCTGCTAGAGCCACATTGT | + |
|
Preference number: 4 (lower is better) Translates to: QLERSAGHGQAPVPSTPYSAWHV*LLEPHC Trigger: ACAATGTGGCTCTAGCAGCCAAACATGCCAAGCAGA...ATATGGTGTTGATGGCACTGGGGCCTGCCCATGGCCTGCAGAACGCTCAAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR CCA 90 bp | CCTCCAGCCGAGCTTTTAGAAACATCAGAGCCTGGATCTCCTCTGGAGTGGCCTTTGACAGTGAAACCTTaGCCCTGCCCTTGGCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: PPAELLETSEPGSPLEWPLTVKP*PCPWPT Trigger: AGTTGGCCAAGGGCAGGGCCAAGGTTTCACTGTCAA...AGGCCACTCCAGAGGAGATCCAGGCTCTGATGTTTCTAAAAGCTCGGCTGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR CCA 90 bp | TTCCTGGCTCGGAGAGAGTGGGGTTTGGGCGCCGCAATGAGACAGTTGTTTCTGCTCTCTTCAGGAGAGTaGGTGCTGGAACTCAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: FLARREWGLGAAMRQLFLLSSGE*VLELRT Trigger: AGTTCTGAGTTCCAGCACCCACTCTCCTGAAGAGAG...CAGAAACAACTGTCTCATTGCGGCGCCCAAACCCCACTCTCTCCGAGCCAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR CCA 90 bp | GATCTCCTCTGGAGTGGCCTTCGAGAAAGGACCCAGACTGGGAGGTGTTTCTCCAGTGGAGTGGAGAAGTaGAACATGGACTGGATGGCT | + |
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Preference number: 4 (lower is better) Translates to: DLLWSGLRERTQTGRCFSSGVEK*NMDWMA Trigger: AGCCATCCAGTCCATGTTCCACTTCTCCACTCCACT...GGAGAAACACCTCCCAGTCTGGGTCCTTTCTCGAAGGCCACTCCAGAGGAGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR TCA 90 bp | CCTCCAGCCGAGCTTTTAGAAACATCAGAGCCTGGATCTCCTCTGGAGTGGCCTCACTGGGGTCATCGTTaGAGATATACTGGATGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PPAELLETSEPGSPLEWPHWGHR*RYTGCP Trigger: AGGGCATCCAGTATATCTTCAACGATGACCCCAGTG...AGGCCACTCCAGAGGAGATCCAGGCTCTGATGTTTCTAAAAGCTCGGCTGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR GCA 90 bp | AGGACCCAGACTGGGAGGTGTTTCTCCATGCAATGCCTGCGCCAGGCTCCTTGCACAATGAGAATCCTCTaGAGCCCATATTTCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RTQTGRCFSMQCLRQAPCTMRIL*SPYFCL Trigger: CAAGCAGAAATATGGGCTGCAGAGGATTCTCATTGT...GCAAGGAGCCTGGCGCAGGCATTGCATGGAGAAACACCTCCCAGTCTGGGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR GCA 90 bp | AATTTCCAGCGAGCCTCCAGCCGAGCTTTTAGAAACATCAGAGCCTGGATCTCCCTGCCCTTGGCCAACTaGATCTGCATCAGACTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NFQRASSRAFRNIRAWISLPLAN*ICIRLW Trigger: CCAGAGTCTGATGCAGATGCAGTTGGCCAAGGGCAG...GGAGATCCAGGCTCTGATGTTTCTAAAAGCTCGGCTGGAGGCTCGCTGGAAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR CCA 90 bp | CTACAGCTAGAATTCGGCCCCCTACTGGGCTCCGAAGCATTGCAGCCAAGAGAGTTTCCCATCCCAACCTaGTTCCAGGGCAAATTGACA | + |
|
Preference number: 4 (lower is better) Translates to: LQLEFGPLLGSEALQPREFPIPT*FQGKLT Trigger: TGTCAATTTGCCCTGGAACCAGGTTGGGATGGGAAA...CTCTCTTGGCTGCAATGCTTCGGAGCCCAGTAGGGGGCCGAATTCTAGCTGTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR TCA 90 bp | AATTTCCAGCGAGCCTCCAGCCGAGCTTTTAGAAACATCAGAGCCTGGATCTCCCTAGAGCCACATTGTTaGACACACAGAATCCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: NFQRASSRAFRNIRAWISLEPHC*THRIHW Trigger: CCAATGGATTCTGTGTGTTCAACAATGTGGCTCTAG...GGAGATCCAGGCTCTGATGTTTCTAAAAGCTCGGCTGGAGGCTCGCTGGAAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS CCA 90 bp | CAGGCCACGCTGCCGCAGGCCATCCAGGGCAGCTGTCAGGCGCTCTaGGCACTCAATTTCGCACTCGGGGTCATCCCAGAGCAGTCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: QATLPQAIQGSCQAL*ALNFALGVIPEQSS Trigger: ACTCGACTGCTCTGGGATGACCCCGAGTGCGAAATTGAGTGCCCAGAGCGCCTGACAGCTGCCCTGGATGGCCTGCGGCAGCGTGGCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS GCA 90 bp | GCCTCACAAGCTGACAAACACAGGCACCTTTCTTCCAGGCCACGCTaGCGCAGGCCATCCAGGGCAGCTGTCAGGCGCTCTGGGCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: ASQADKHRHLSSRPR*RRPSRAAVRRSGHS Trigger: TGAGTGCCCAGAGCGCCTGACAGCTGCCCTGGATGGCCTGCGGCAGCGTGGCCTGGAAGAAAGGTGCCTGTGTTTGTCAGCTTGTGAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS CCA 90 bp | CTGGGCTGTCTGGACACTCTGGATGGACTCCAGGGCACTCTGACATaGCACCATGAGCCCAAGAAGGGGAGGTGTGGGGTCACCAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LGCLDTLDGLQGTLT*HHEPKKGRCGVTKQ Trigger: CTGCTTGGTGACCCCACACCTCCCCTTCTTGGGCTCATGGTGCCATGTCAGAGTGCCCTGGAGTCCATCCAGAGTGTCCAGACAGCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS TCA 90 bp | AGCCTGGCCCAGGCTTCGGTCTCCTCCCTCAAGACTGACCCTTCTTaGTGGAGCACTCCAGGAGGTAAGCACAGAGCAGCACCTGGTACA | + |
|
Preference number: 5 (lower is better) Translates to: SLAQASVSSLKTDPS*WSTPGGKHRAAPGT Trigger: TGTACCAGGTGCTGCTCTGTGCTTACCTCCTGGAGTGCTCCATCAAGAAGGGTCAGTCTTGAGGGAGGAGACCGAAGCCTGGGCCAGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082197.12 |
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| CDS TCA 90 bp | AGAGCCACATTGTTGAACACACAGAATCCATTGGCAGCTGCCCTCTaGCTGTGGTGCCCTGGAGGCCTCACCAGGGCAAGCCCATTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RATLLNTQNPLAAAL*LWCPGGLTRASPLC Trigger: GCACAATGGGCTTGCCCTGGTGAGGCCTCCAGGGCACCACAGTCAGAGGGCAGCTGCCAATGGATTCTGTGTGTTCAACAATGTGGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS TCA 90 bp | ATCTTCCCCAGTGTGGCAAGATCCTCATCCTGGAACCGGGATTTGTaGAGCCTGGCCCAGGCTTCGGTCTCCTCCCTCAAGACTGACCCT | + |
|
Preference number: 5 (lower is better) Translates to: IFPSVARSSSWNRDL*SLAQASVSSLKTDP Trigger: AGGGTCAGTCTTGAGGGAGGAGACCGAAGCCTGGGCCAGGCTTCACAAATCCCGGTTCCAGGATGAGGATCTTGCCACACTGGGGAAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082197.12 |
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| CDS GCA 90 bp | CAAGAAGGGGAGGTGTGGGGTCACCAAGCAGTGTCTGCACCATCATaGACACTGACTGTGCTAGGGACTCCAAGTGGTAGCCACCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QEGEVWGHQAVSAPS*TLTVLGTPSGSHPP Trigger: TGGAGGGTGGCTACCACTTGGAGTCCCTAGCACAGTCAGTGTGCATGATGGTGCAGACACTGCTTGGTGACCCCACACCTCCCCTTCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082197.12 |
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| CDS GCA 90 bp | TGCATCCTTGCCCCGGATGTTGAGCCACAGAATTCTCCCATCATCTaGAAGGTCCAGGGGTCGATCCAGTTGTCCCAGGGCCACACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: CILAPDVEPQNSPII*KVQGSIQLSQGHTE Trigger: CTCTGTGTGGCCCTGGGACAACTGGATCGACCCCTGGACCTTGCAGATGATGGGAGAATTCTGTGGCTCAACATCCGGGGCAAGGATGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS GCA 90 bp | GGCCTTCGAGAAAGGACCCAGACTGGGAGGTGTTTCTCCATGCAATaGCTGCGCCAGGCTCCTTGCAAGCAGGCGTATGGATTCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GLRERTQTGRCFSMQ*LRQAPCKQAYGFLF Trigger: GAAGAGGAATCCATACGCCTGCTTGCAAGGAGCCTGGCGCAGGCATTGCATGGAGAAACACCTCCCAGTCTGGGTCCTTTCTCGAAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082197.12 |
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| CDS GCA 90 bp | CAAGAAGGGGAGGTGTGGGGTCACCAAGCAGTGTCTGCACCATCATaGACACTGACTGTGCTAGGGACTCCAAGTGGTAGCCACCCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: QEGEVWGHQAVSAPS*TLTVLGTPSGSHPR Trigger: TCGAGGGTGGCTACCACTTGGAGTCCCTAGCACAGTCAGTGTGCATGATGGTGCAGACACTGCTTGGTGACCCCACACCTCCCCTTCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR CAA 90 bp | GGCCCCCTACTGGGCTCCGAAGCATTGCAGCCAAGAGAGCAGCTTGAGCGTTCTAACTGGGGCCACATTTaGCTGGAGGCTTGTCCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: GPLLGSEALQPREQLERSNWGHI*LEACPV Trigger: TACTGGACAAGCCTCCAGCAAAATGTGGCCCCAGTT...AGAACGCTCAAGCTGCTCTCTTGGCTGCAATGCTTCGGAGCCCAGTAGGGGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR CAA 90 bp | GGAGTGGCCTTCGAGAAAGGACCCAGACTGGGAGGTGTTTCTCCATGCAATGCCCGAGGGCAGTTGTGGTaGCTATGGCATTTCTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GVAFEKGPRLGGVSPCNARGQLW*LWHFWP Trigger: GGGCCAGAAATGCCATAGCAACCACAACTGCCCTCG...GGCATTGCATGGAGAAACACCTCCCAGTCTGGGTCCTTTCTCGAAGGCCACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS TCA 90 bp | TTTCTGGCCCAGGCTTCGGTCTCCTCCCTCAAGACTGACCCTTCTTaGTGGAGCACTCCAGGAGGTAAGCACAGAGCAGCACCTGGTACA | + |
|
Preference number: 5 (lower is better) Translates to: FLAQASVSSLKTDPS*WSTPGGKHRAAPGT Trigger: TGTACCAGGTGCTGCTCTGTGCTTACCTCCTGGAGTGCTCCATCAAGAAGGGTCAGTCTTGAGGGAGGAGACCGAAGCCTGGGCCAGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS GCA 90 bp | GGCTCTCACCAAGCAGACGCAGAGATCTCTCTTCAGGAGAGTGGGTaGTGGAACTCAGAACTGGGGCCACATTTTGCTGGAGGCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GSHQADAEISLQESG*WNSELGPHFAGGLS Trigger: GGACAAGCCTCCAGCAAAATGTGGCCCCAGTTCTGAGTTCCAGCACCCACTCTCCTGAAGAGAGATCTCTGCGTCTGCTTGGTGAGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS CCA 90 bp | CCAGTGTGGCAAGATCCTCATCCTGGAACCGGGATTTGTGAAGCCTaGCCCAGGCTTCGGTCTCCTCCCTCAAGACTGACCCTTCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: PVWQDPHPGTGICEA*PRLRSPPSRLTLLD Trigger: ATCAAGAAGGGTCAGTCTTGAGGGAGGAGACCGAAGCCTGGGCCAGGCTTCACAAATCCCGGTTCCAGGATGAGGATCTTGCCACACTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082197.12 |
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| CDS CCA 90 bp | AGGCTCAGAAACCCTCCAGTTGTCTGTGGCAGTGGAGTGGAGAAGTaGAACATGGACTGGATGGCTGCATCCTTGCCCCGGATGTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RLRNPPVVCGSGVEK*NMDWMAASLPRMLS Trigger: GCTCAACATCCGGGGCAAGGATGCAGCCATCCAGTCCATGTTCCACTTCTCCACTCCACTGCCACAGACAACTGGAGGGTTTCTGAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082197.12 |
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| CDS-3UTR CAA 90 bp | CTACAGCTAGAATTCGGCCCCCTACTGGGCTCCGAAGCATTGCAGCCAAGAGAGCTGTGGCGAGGGCAGTaGTGGTTGCTATGGCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: LQLEFGPLLGSEALQPRELWRGQ*WLLWHF Trigger: GAAATGCCATAGCAACCACAACTGCCCTCGCCACAG...CTCTCTTGGCTGCAATGCTTCGGAGCCCAGTAGGGGGCCGAATTCTAGCTGTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS GCA 90 bp | TTCGAGAAAGGACCCAGACTGGGAGGTGTTTCTCCATGCAATGCCTaGGCCAGGCTCCTTGCAAGCAGGCGTATGGATTCCTCTTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: FEKGPRLGGVSPCNA*ARLLASRRMDSSST Trigger: AGTGGAAGAGGAATCCATACGCCTGCTTGCAAGGAGCCTGGCGCAGGCATTGCATGGAGAAACACCTCCCAGTCTGGGTCCTTTCTCGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082197.12 |
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| CDS CCA 90 bp | CCTCCAGTTGTCTGTGGCAGTGGAGTGGAGAAGTGGAACATGGACTaGATGGCTGCATCCTTGCCCCGGATGTTGAGCCACAGAATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PPVVCGSGVEKWNMD*MAASLPRMLSHRIL Trigger: GAGAATTCTGTGGCTCAACATCCGGGGCAAGGATGCAGCCATCCAGTCCATGTTCCACTTCTCCACTCCACTGCCACAGACAACTGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082197.12 |
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| CDS CCA 90 bp | CAGACCCAGAATGAGGCTCAGAAACCCTCCAGTTGTCTGTGGCAGTaGAGTGGAGAAGTGGAACATGGACTGGATGGCTGCATCCTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QTQNEAQKPSSCLWQ*SGEVEHGLDGCILA Trigger: GGCAAGGATGCAGCCATCCAGTCCATGTTCCACTTCTCCACTCCACTGCCACAGACAACTGGAGGGTTTCTGAGCCTCATTCTGGGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082197.12 |
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| CDS CCA 90 bp | ATGTTGCTGCTGTGGCGAGGGCAGTTGTGGTTGCTATGGCATTTCTaGCCCAGGCTTCGGTCTCCTCCCTCAAGACTGACCCTTCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: MLLLWRGQLWLLWHF*PRLRSPPSRLTLLD Trigger: ATCAAGAAGGGTCAGTCTTGAGGGAGGAGACCGAAGCCTGGGCCAGAAATGCCATAGCAACCACAACTGCCCTCGCCACAGCAGCAACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR CAA 90 bp | CCACTACAGCTAGAATTCGGCCCCCTACTGGGCTCCGAAGCATTGCAGCCAAGATGGTTCCAGGGCAAATaGACAGTGAAACCTTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PLQLEFGPLLGSEALQPRWFQGK*TVKPWP Trigger: GGGCCAAGGTTTCACTGTCAATTTGCCCTGGAACCA...TCTTGGCTGCAATGCTTCGGAGCCCAGTAGGGGGCCGAATTCTAGCTGTAGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS TCA 90 bp | AGAAGTGGAACATGGACTGGATGGCTGCATCCTTGCCCCGGATGTTaGGCCACAGAATTCTCCCATCATCTGCAAGGTCCAGGGGTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: RSGTWTGWLHPCPGC*ATEFSHHLQGPGVD Trigger: ATCGACCCCTGGACCTTGCAGATGATGGGAGAATTCTGTGGCTCAACATCCGGGGCAAGGATGCAGCCATCCAGTCCATGTTCCACTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS GCA 90 bp | TTAGACAGTGCGTGGAGCTCCTCTTTATCCAGGGTCTGGGTCTTCTaGACCAGGGCTATATATTCCGGGCTGTGCACCAAGCCCAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: LDSAWSSSLSRVWVF*TRAIYSGLCTKPNS Trigger: AGAGTTGGGCTTGGTGCACAGCCCGGAATATATAGCCCTGGTGCAGAAGACCCAGACCCTGGATAAAGAGGAGCTCCACGCACTGTCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS GCA 90 bp | TGTCTGTGGCAGTGGAGTGGAGAAGTGGAACATGGACTGGATGGCTaGATCCTTGCCCCGGATGTTGAGCCACAGAATTCTCCCATCATC | + |
|
Preference number: 5 (lower is better) Translates to: CLWQWSGEVEHGLDG*ILAPDVEPQNSPII Trigger: GATGATGGGAGAATTCTGTGGCTCAACATCCGGGGCAAGGATGCAGCCATCCAGTCCATGTTCCACTTCTCCACTCCACTGCCACAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082197.12 |
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| CDS CCA 90 bp | TCTCACCAAGCAGACGCAGAGATCTCTCTTCAGGAGAGTGGGTGCTaGAACTCAGAACTGGGGCCACATTTTGCTGGAGGCTTGTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SHQADAEISLQESGC*NSELGPHFAGGLSS Trigger: ACTGGACAAGCCTCCAGCAAAATGTGGCCCCAGTTCTGAGTTCCAGCACCCACTCTCCTGAAGAGAGATCTCTGCGTCTGCTTGGTGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS CCA 90 bp | CAGTACCAGACCCAGAATGAGGCTCAGAAACCCTCCAGTTGTCTGTaGCAGTGGAGTGGAGAAGTGGAACATGGACTGGATGGCTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: QYQTQNEAQKPSSCL*QWSGEVEHGLDGCI Trigger: GATGCAGCCATCCAGTCCATGTTCCACTTCTCCACTCCACTGCCACAGACAACTGGAGGGTTTCTGAGCCTCATTCTGGGTCTGGTACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082197.12 |
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| CDS CCA 90 bp | TTGTACTGCTTAGACAGTGCGTGGAGCTCCTCTTTATCCAGGGTCTaGGTCTTCTGCACCAGGGCTATATATTCCGGGCTGTGCACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LYCLDSAWSSSLSRV*VFCTRAIYSGLCTK Trigger: CTTGGTGCACAGCCCGGAATATATAGCCCTGGTGCAGAAGACCCAGACCCTGGATAAAGAGGAGCTCCACGCACTGTCTAAGCAGTACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS-3UTR CAA 90 bp | GAGCTTTTAGAAACATCAGAGCCTGGATCTCCTCTGGAGTGGCCTTCGAGAAAGACCAGGGCAAGCCCATaGTGCACAGCTCCTGTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: ELLETSEPGSPLEWPSRKTRASP*CTAPVS Trigger: GCTAACAGGAGCTGTGCACAATGGGCTTGCCCTGGT...CTTTCTCGAAGGCCACTCCAGAGGAGATCCAGGCTCTGATGTTTCTAAAAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR CAA 90 bp | ACCCAGACTGGGAGGTGTTTCTCCATGCAATGCCTGCGCCAGGCTCCTTGCAAGGCTAGAGCCACATTGTaGAACACACAGAATCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: TQTGRCFSMQCLRQAPCKARATL*NTQNPL Trigger: CAATGGATTCTGTGTGTTCAACAATGTGGCTCTAGC...CTTGCAAGGAGCCTGGCGCAGGCATTGCATGGAGAAACACCTCCCAGTCTGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR CAA 90 bp | AATTTCCAGCGAGCCTCCAGCCGAGCTTTTAGAAACATCAGAGCCTGGATCTCCATTGACAGTGAAACCTaGGCCCTGCCCTTGGCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: NFQRASSRAFRNIRAWISIDSET*ALPLAN Trigger: GTTGGCCAAGGGCAGGGCCAAGGTTTCACTGTCAAT...GGAGATCCAGGCTCTGATGTTTCTAAAAGCTCGGCTGGAGGCTCGCTGGAAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS TCA 90 bp | GCCCATATTTCTGCTTGGCATGTTTGGCTGCTAGAGCCACATTGTTaGACACACAGAATCCATTGGCAGCTGCCCTCTGACTGTGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: AHISAWHVWLLEPHC*THRIHWQLPSDCGA Trigger: GGCACCACAGTCAGAGGGCAGCTGCCAATGGATTCTGTGTGTTCAACAATGTGGCTCTAGCAGCCAAACATGCCAAGCAGAAATATGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS-3UTR CAA 90 bp | CAGCGAGCCTCCAGCCGAGCTTTTAGAAACATCAGAGCCTGGATCTCCTCTGGAGCTGCTAGAGCCACATaGTTGAACACACAGAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: QRASSRAFRNIRAWISSGAARAT*LNTQNP Trigger: TGGATTCTGTGTGTTCAACAATGTGGCTCTAGCAGC...TCCAGAGGAGATCCAGGCTCTGATGTTTCTAAAAGCTCGGCTGGAGGCTCGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS-3UTR CAA 90 bp | AATTTCCAGCGAGCCTCCAGCCGAGCTTTTAGAAACATCAGAGCCTGGATCTCCTTCTGCTTGGCATGTTaGGCTGCTAGAGCCACATTG | + |
|
Preference number: 5 (lower is better) Translates to: NFQRASSRAFRNIRAWISFCLAC*AARATL Trigger: CAATGTGGCTCTAGCAGCCAAACATGCCAAGCAGAA...GGAGATCCAGGCTCTGATGTTTCTAAAAGCTCGGCTGGAGGCTCGCTGGAAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS GCA 90 bp | GCTGCTGTGGCGAGGGCAGTTGTGGTTGCTATGGCATTTCTTATCTaGCCATCCATGATTCCATCTAAGAGACACAGAATCTTCCCCAGT | + |
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Preference number: 5 (lower is better) Translates to: AAVARAVVVAMAFLI*PSMIPSKRHRIFPS Trigger: ACTGGGGAAGATTCTGTGTCTCTTAGATGGAATCATGGATGGGCAGATAAGAAATGCCATAGCAACCACAACTGCCCTCGCCACAGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082197.12 |
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| CDS GCA 90 bp | TGGACATCCCAGTCGACAATGAGAATCCTCTGCAGCCCATATTTCTaGTTGGCATGTTTGGCTGCTAGAGCCACATTGTTGAACACACAG | + |
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Preference number: 5 (lower is better) Translates to: WTSQSTMRILCSPYF*LACLAARATLLNTQ Trigger: CTGTGTGTTCAACAATGTGGCTCTAGCAGCCAAACATGCCAAGCAGAAATATGGGCTGCAGAGGATTCTCATTGTCGACTGGGATGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS GCA 72 bp | TGGTACAGTCGAGGCCACCGCTGTGCAGATTGGAGGTaGAGGGCGGAGGCACAGTTGGTCCAGGAGGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: WYSRGHRCADWR*RAEAQLVQEGA Trigger: AGCCCCCTCCTGGACCAACTGTGCCTCCGCCCTGCACCTCCAATCTGCACAGCGGTGGCCTCGACTGTACCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS CCA 72 bp | CTGCCGCAGGCCATCCAGGGCAGCTGTCAGGCGCTCTaGGCACTCAATTTCGCACTCGGGGTCATCCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: LPQAIQGSCQAL*ALNFALGVIPE Trigger: CTCTGGGATGACCCCGAGTGCGAAATTGAGTGCCCAGAGCGCCTGACAGCTGCCCTGGATGGCCTGCGGCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS GCA 72 bp | GCTGACAAACACAGGCACCTTTCTTCCAGGCCACGCTaGCGCAGGCCATCCAGGGCAGCTGTCAGGCGCTCT | + |
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Preference number: 6 (lower is better) Translates to: ADKHRHLSSRPR*RRPSRAAVRRS Trigger: AGAGCGCCTGACAGCTGCCCTGGATGGCCTGCGGCAGCGTGGCCTGGAAGAAAGGTGCCTGTGTTTGTCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS GCA 72 bp | ACAGAGCAGCACCTGGTACAGTCGAGGCCACCGCTGTaGAGATTGGAGGTGCAGGGCGGAGGCACAGTTGGT | + |
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Preference number: 6 (lower is better) Translates to: TEQHLVQSRPPL*RLEVQGGGTVG Trigger: ACCAACTGTGCCTCCGCCCTGCACCTCCAATCTGCACAGCGGTGGCCTCGACTGTACCAGGTGCTGCTCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS CCA 72 bp | GAATCCATTGGCAGCTGCCCTCTGACTGTGGTGCCCTaGAGGCCTCACCAGGGCAAGCCCATTGTGCACAGC | + |
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Preference number: 6 (lower is better) Translates to: ESIGSCPLTVVP*RPHQGKPIVHS Trigger: GCTGTGCACAATGGGCTTGCCCTGGTGAGGCCTCCAGGGCACCACAGTCAGAGGGCAGCTGCCAATGGATTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS CAA 72 bp | CTGTGGTGCCCTGGAGGCCTCACCAGGGCAAGCCCATaGTGCACAGCTCCTGTTAGCACAGCATCGACCAGC | + |
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Preference number: 6 (lower is better) Translates to: LWCPGGLTRASP*CTAPVSTASTS Trigger: GCTGGTCGATGCTGTGCTAACAGGAGCTGTGCACAATGGGCTTGCCCTGGTGAGGCCTCCAGGGCACCACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS CCA 72 bp | CTGGACACTCTGGATGGACTCCAGGGCACTCTGACATaGCACCATGAGCCCAAGAAGGGGAGGTGTGGGGTC | + |
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Preference number: 6 (lower is better) Translates to: LDTLDGLQGTLT*HHEPKKGRCGV Trigger: GACCCCACACCTCCCCTTCTTGGGCTCATGGTGCCATGTCAGAGTGCCCTGGAGTCCATCCAGAGTGTCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS GCA 72 bp | GCCCCGGATGTTGAGCCACAGAATTCTCCCATCATCTaGAAGGTCCAGGGGTCGATCCAGTTGTCCCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: APDVEPQNSPII*KVQGSIQLSQG Trigger: GCCCTGGGACAACTGGATCGACCCCTGGACCTTGCAGATGATGGGAGAATTCTGTGGCTCAACATCCGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS CCA 72 bp | CTGTGGCGAGGGCAGTTGTGGTTGCTATGGCATTTCTaGCCCAGGCTTCGGTCTCCTCCCTCAAGACTGACC | + |
|
Preference number: 6 (lower is better) Translates to: LWRGQLWLLWHF*PRLRSPPSRLT Trigger: GGTCAGTCTTGAGGGAGGAGACCGAAGCCTGGGCCAGAAATGCCATAGCAACCACAACTGCCCTCGCCACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS CCA 72 bp | CCCTGTGGCAGTGGAGTGGAGAAGTGGAACATGGACTaGATGGCTGCATCCTTGCCCCGGATGTTGAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PCGSGVEKWNMD*MAASLPRMLSH Trigger: GTGGCTCAACATCCGGGGCAAGGATGCAGCCATCCAGTCCATGTTCCACTTCTCCACTCCACTGCCACAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109347.2 |
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| CDS CCA 72 bp | CAAGATCCTCATCCTGGAACCGGGATTTGTGAAGCCTaGCCCAGGCTTCGGTCTCCTCCCTCAAGACTGACC | + |
|
Preference number: 6 (lower is better) Translates to: QDPHPGTGICEA*PRLRSPPSRLT Trigger: GGTCAGTCTTGAGGGAGGAGACCGAAGCCTGGGCCAGGCTTCACAAATCCCGGTTCCAGGATGAGGATCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082197.12 |
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| CDS CCA 72 bp | GTCTGTGGCAGTGGAGTGGAGAAGTGGAACATGGACTaGATGGCTGCATCCTTGCCCCGGATGTTGAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: VCGSGVEKWNMD*MAASLPRMLSH Trigger: GTGGCTCAACATCCGGGGCAAGGATGCAGCCATCCAGTCCATGTTCCACTTCTCCACTCCACTGCCACAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082197.12 |
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| CDS CCA 72 bp | AACCCTCCAGTTGTCTGTGGCAGTGGAGTGGAGAAGTaGAACATGGACTGGATGGCTGCATCCTTGCCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: NPPVVCGSGVEK*NMDWMAASLPR Trigger: CCGGGGCAAGGATGCAGCCATCCAGTCCATGTTCCACTTCTCCACTCCACTGCCACAGACAACTGGAGGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082197.12 |
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| CDS CCA 72 bp | GCAATGCCTGCGCCAGGCTCCTTGCAAGCAGGCGTATaGATTCCTCTTCCACTACAGCTAGAATTCGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: AMPAPGSLQAGV*IPLPLQLEFGP Trigger: GGGGCCGAATTCTAGCTGTAGTGGAAGAGGAATCCATACGCCTGCTTGCAAGGAGCCTGGCGCAGGCATTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082197.12 |
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| CDS CAA 90 bp | CTCTTCAGGAGAGTGGGTGCTGGAACTCAGAACTGGGGCCACATTTaGCTGGAGGCTTGTCCAGTAAGGGGTCTGGGCTGTCTGGACACT | + |
|
Preference number: 6 (lower is better) Translates to: LFRRVGAGTQNWGHI*LEACPVRGLGCLDT Trigger: AGTGTCCAGACAGCCCAGACCCCTTACTGGACAAGCCTCCAGCAAAATGTGGCCCCAGTTCTGAGTTCCAGCACCCACTCTCCTGAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS GCA 72 bp | AGCCACATTGTTGAACACACAGAATCCATTGGCAGCTaGCCTCTGACTGTGGTGCCCTGGAGGCCTCACCAG | + |
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Preference number: 6 (lower is better) Translates to: SHIVEHTESIGS*PLTVVPWRPHQ Trigger: CTGGTGAGGCCTCCAGGGCACCACAGTCAGAGGGCAGCTGCCAATGGATTCTGTGTGTTCAACAATGTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS GCA 72 bp | GAGGTGTGGGGTCACCAAGCAGTGTCTGCACCATCATaGACACTGACTGTGCTAGGGACTCCAAGTGGTAGC | + |
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Preference number: 6 (lower is better) Translates to: EVWGHQAVSAPS*TLTVLGTPSGS Trigger: GCTACCACTTGGAGTCCCTAGCACAGTCAGTGTGCATGATGGTGCAGACACTGCTTGGTGACCCCACACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS CCA 72 bp | CAATTTCGCACTCGGGGTCATCCCAGAGCAGTCGAGTaGCTGTCATGTCCTCGTGGTACACAAGTGCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: QFRTRGHPRAVE*LSCPRGTQVLC Trigger: GCACAGCACTTGTGTACCACGAGGACATGACAGCCACTCGACTGCTCTGGGATGACCCCGAGTGCGAAATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS CCA 72 bp | GGAGGGGGCTCAGTGAATCCTCTGCTACTGCACATGTaGGGCTCTCACCAAGCAGACGCAGAGATCTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: GGGSVNPLLLHM*GSHQADAEISL Trigger: AAGAGAGATCTCTGCGTCTGCTTGGTGAGAGCCCCACATGTGCAGTAGCAGAGGATTCACTGAGCCCCCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS CAA 90 bp | GAGAAGTGGAACATGGACTGGATGGCTGCATCCTTGCCCCGGATGTaGAGCCACAGAATTCTCCCATCATCTGCAAGGTCCAGGGGTCGA | + |
|
Preference number: 6 (lower is better) Translates to: EKWNMDWMAASLPRM*SHRILPSSARSRGR Trigger: TCGACCCCTGGACCTTGCAGATGATGGGAGAATTCTGTGGCTCAACATCCGGGGCAAGGATGCAGCCATCCAGTCCATGTTCCACTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS CAA 90 bp | GGCAGTGGAGTGGAGAAGTGGAACATGGACTGGATGGCTGCATCCTaGCCCCGGATGTTGAGCCACAGAATTCTCCCATCATCTGCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GSGVEKWNMDWMAAS*PRMLSHRILPSSAR Trigger: CCTTGCAGATGATGGGAGAATTCTGTGGCTCAACATCCGGGGCAAGGATGCAGCCATCCAGTCCATGTTCCACTTCTCCACTCCACTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS TCA 72 bp | GGAAACCATAGGCCAAGGGCAGTACCAGACCCAGAATaGGGCTCAGAAACCCTCCAGTTGTCTGTGGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: GNHRPRAVPDPE*GSETLQLSVAV Trigger: CACTGCCACAGACAACTGGAGGGTTTCTGAGCCTCATTCTGGGTCTGGTACTGCCCTTGGCCTATGGTTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082197.12 |
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| CDS GCA 72 bp | TGGTTCCAGGGCAAATTGACAGTGAAACCTTGGCCCTaGCCTTGGCCAACTGCATCTGCATCAGACTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: WFQGKLTVKPWP*PWPTASASDSG Trigger: CCCAGAGTCTGATGCAGATGCAGTTGGCCAAGGGCAGGGCCAAGGTTTCACTGTCAATTTGCCCTGGAACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS CAA 72 bp | TCGGCATTTCCCATCCCAACCTGGTTCCAGGGCAAATaGACAGTGAAACCTTGGCCCTGCCCTTGGCCAACT | + |
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Preference number: 6 (lower is better) Translates to: SAFPIPTWFQGK*TVKPWPCPWPT Trigger: AGTTGGCCAAGGGCAGGGCCAAGGTTTCACTGTCAATTTGCCCTGGAACCAGGTTGGGATGGGAAATGCCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS GCA 72 bp | TGGGTCTTCTGCACCAGGGCTATATATTCCGGGCTGTaGACCAAGCCCAACTCTTCCTCTGATGCCTCACAA | + |
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Preference number: 6 (lower is better) Translates to: WVFCTRAIYSGL*TKPNSSSDASQ Trigger: TTGTGAGGCATCAGAGGAAGAGTTGGGCTTGGTGCACAGCCCGGAATATATAGCCCTGGTGCAGAAGACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS CCA 72 bp | TTAGACAGTGCGTGGAGCTCCTCTTTATCCAGGGTCTaGGTCTTCTGCACCAGGGCTATATATTCCGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LDSAWSSSLSRV*VFCTRAIYSGL Trigger: CAGCCCGGAATATATAGCCCTGGTGCAGAAGACCCAGACCCTGGATAAAGAGGAGCTCCACGCACTGTCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS CCA 72 bp | CAGGGCAAATTGACAGTGAAACCTTGGCCCTGCCCTTaGCCAACTGCATCTGCATCAGACTCTGGGAGAAAC | + |
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Preference number: 6 (lower is better) Translates to: QGKLTVKPWPCP*PTASASDSGRN Trigger: GTTTCTCCCAGAGTCTGATGCAGATGCAGTTGGCCAAGGGCAGGGCCAAGGTTTCACTGTCAATTTGCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS CCA 72 bp | AATGAGGCTCAGAAACCCTCCAGTTGTCTGTGGCAGTaGAGTGGAGAAGTGGAACATGGACTGGATGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: NEAQKPSSCLWQ*SGEVEHGLDGC Trigger: GCAGCCATCCAGTCCATGTTCCACTTCTCCACTCCACTGCCACAGACAACTGGAGGGTTTCTGAGCCTCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082197.12 |
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| CDS CAA 72 bp | GTGGAGAAGTGGAACATGGACTGGATGGCTGCATCCTaGCCCCGGATGTTGAGCCACAGAATTCTCCCATCA | + |
|
Preference number: 6 (lower is better) Translates to: VEKWNMDWMAAS*PRMLSHRILPS Trigger: TGATGGGAGAATTCTGTGGCTCAACATCCGGGGCAAGGATGCAGCCATCCAGTCCATGTTCCACTTCTCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS TCA 72 bp | TCTGCTTGGCATGTTTGGCTGCTAGAGCCACATTGTTaGACACACAGAATCCATTGGCAGCTGCCCTCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: SAWHVWLLEPHC*THRIHWQLPSD Trigger: GTCAGAGGGCAGCTGCCAATGGATTCTGTGTGTTCAACAATGTGGCTCTAGCAGCCAAACATGCCAAGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS GCA 72 bp | CGGGTGAAAGTAGACAGCATTGTACTGCTTAGACAGTaGGTGGAGCTCCTCTTTATCCAGGGTCTGGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: RVKVDSIVLLRQ*VELLFIQGLGL Trigger: AAGACCCAGACCCTGGATAAAGAGGAGCTCCACGCACTGTCTAAGCAGTACAATGCTGTCTACTTTCACCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS CCA 72 bp | TCATCGTTGAAGATATACTGGATGCCCTGGCCATGGTaGACATCCCAGTCGACAATGAGAATCCTCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSLKIYWMPWPW*TSQSTMRILCS Trigger: GCTGCAGAGGATTCTCATTGTCGACTGGGATGTCCACCATGGCCAGGGCATCCAGTATATCTTCAACGATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS GCA 72 bp | ATCCAATGTTGCTGCTGTGGCGAGGGCAGTTGTGGTTaGTATGGCATTTCTTATCTGCCCATCCATGATTCC | + |
|
Preference number: 6 (lower is better) Translates to: IQCCCCGEGSCG*YGISYLPIHDS Trigger: GGAATCATGGATGGGCAGATAAGAAATGCCATAGCAACCACAACTGCCCTCGCCACAGCAGCAACATTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082197.12 |
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| CDS CAA 90 bp | TCGACAATGAGAATCCTCTGCAGCCCATATTTCTGCTTGGCATGTTaGGCTGCTAGAGCCACATTGTTGAACACACAGAATCCATTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: STMRILCSPYFCLAC*AARATLLNTQNPLA Trigger: TGCCAATGGATTCTGTGTGTTCAACAATGTGGCTCTAGCAGCCAAACATGCCAAGCAGAAATATGGGCTGCAGAGGATTCTCATTGTCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS CAA 90 bp | ACATCCCAGTCGACAATGAGAATCCTCTGCAGCCCATATTTCTGCTaGGCATGTTTGGCTGCTAGAGCCACATTGTTGAACACACAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: TSQSTMRILCSPYFC*ACLAARATLLNTQN Trigger: ATTCTGTGTGTTCAACAATGTGGCTCTAGCAGCCAAACATGCCAAGCAGAAATATGGGCTGCAGAGGATTCTCATTGTCGACTGGGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS GCA 72 bp | GCGAGGGCAGTTGTGGTTGCTATGGCATTTCTTATCTaGCCATCCATGATTCCATCTAAGAGACACAGAATC | + |
|
Preference number: 6 (lower is better) Translates to: ARAVVVAMAFLI*PSMIPSKRHRI Trigger: GATTCTGTGTCTCTTAGATGGAATCATGGATGGGCAGATAAGAAATGCCATAGCAACCACAACTGCCCTCGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082197.12 |
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| CDS CAA 72 bp | TCGACAATGAGAATCCTCTGCAGCCCATATTTCTGCTaGGCATGTTTGGCTGCTAGAGCCACATTGTTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: STMRILCSPYFC*ACLAARATLLN Trigger: GTTCAACAATGTGGCTCTAGCAGCCAAACATGCCAAGCAGAAATATGGGCTGCAGAGGATTCTCATTGTCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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| CDS CAA 72 bp | AGAATCCTCTGCAGCCCATATTTCTGCTTGGCATGTTaGGCTGCTAGAGCCACATTGTTGAACACACAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: RILCSPYFCLAC*AARATLLNTQN Trigger: ATTCTGTGTGTTCAACAATGTGGCTCTAGCAGCCAAACATGCCAAGCAGAAATATGGGCTGCAGAGGATTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082197.12 ENSMUST00000109347.2 |
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