Pregenerated sensors for HCRTR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032360Ensembl transcript IDs: ENSMUST00000063140.15, ENSMUST00000184757.2
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCAGGATTCCCGGGCCCTAATGCTGAGAAGTATATACACGGTTCATaGTTCCATCCCCCGCATCATTTATGCATGTGTCTTATTCATCAG | + |
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Preference number: 1 (lower is better) Translates to: SGFPGPNAEKYIHGS*FHPPHHLCMCLIHQ Trigger: CTGATGAATAAGACACATGCATAAATGATGCGGGGGATGGAATCATGAACCGTGTATATACTTCTCAGCATTAGGGCCCGGGAATCCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
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| 3UTR-3UTR TCA 90 bp | GCTTTGGCCTGTGGTTTGAAGGAGAAGAGTAAGCTGTTGAAAGTTAAGTCCCACGGAAACTTTAGTAAATaGAAACTCAAGTCATCCGGG | + |
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Preference number: 2 (lower is better) Translates to: ALACGLKEKSKLLKVKSHGNFSK*KLKSSG Trigger: CCCGGATGACTTGAGTTTTCATTTACTAAAGTTTCC...GTGGGACTTAACTTTCAACAGCTTACTCTTCTCCTTCAAACCACAGGCCAAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
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| 3UTR-3UTR TCA 90 bp | GCTTTGGCCTGTGGTTTGAAGGAGAAGAGTAAGCTGTTGAAAGTTAAGTCCCACAGGTATTACTGTGCCTaGCACTTTTACACTGAACTT | + |
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Preference number: 2 (lower is better) Translates to: ALACGLKEKSKLLKVKSHRYYCA*HFYTEL Trigger: AAGTTCAGTGTAAAAGTGTCAGGCACAGTAATACCT...GTGGGACTTAACTTTCAACAGCTTACTCTTCTCCTTCAAACCACAGGCCAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
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| 3UTR-3UTR TCA 90 bp | TATTCCATCATCCCTCCCCCTTCTTCTATGATGGTGTTCCACCTTAGGAGTCAAAGCAAAACTTTCCTATaGAGTCTTCTCATTTGCATC | + |
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Preference number: 2 (lower is better) Translates to: YSIIPPPSSMMVFHLRSQSKTFL*SLLICI Trigger: GATGCAAATGAGAAGACTTCATAGGAAAGTTTTGCT...TTGACTCCTAAGGTGGAACACCATCATAGAAGAAGGGGGAGGGATGATGGAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
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| 3UTR-3UTR TCA 90 bp | GCTTTGGCCTGTGGTTTGAAGGAGAAGAGTAAGCTGTTGAAAGTTAAGTCCCACACTAGCCATGTTTCTTaGAATGCAGTTAATTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: ALACGLKEKSKLLKVKSHTSHVS*NAVNSC Trigger: ACAGGAATTAACTGCATTTCAAGAAACATGGCTAGT...GTGGGACTTAACTTTCAACAGCTTACTCTTCTCCTTCAAACCACAGGCCAAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
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| 3UTR-3UTR TCA 90 bp | CATTTTTCACATAGGACAGCAGGACAATGTGGATGTGATTATGAACTTCTCAGTAAACTGTTATCTCTTTaGGCAGACATGGGTGAGATT | + |
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Preference number: 2 (lower is better) Translates to: HFSHRTAGQCGCDYELLSKLLSL*ADMGEI Trigger: AATCTCACCCATGTCTGCTCAAAGAGATAACAGTTT...ACTGAGAAGTTCATAATCACATCCACATTGTCCTGCTGTCCTATGTGAAAAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
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| 3UTR-3UTR CCA 90 bp | CTAATGACGTTGACATCTCACATCGAAGGCTTGAAATACAAAGGAAATAAAGGTCTCTTTGAGCAGACATaGGTGAGATTCCATAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: LMTLTSHIEGLKYKGNKGLFEQT*VRFHKD Trigger: ATCCTTATGGAATCTCACCCATGTCTGCTCAAAGAG...ACCTTTATTTCCTTTGTATTTCAAGCCTTCGATGTGAGATGTCAACGTCATTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
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| 3UTR-3UTR TCA 90 bp | ATTGAACAACAACATCATTTTTCACATAGGACAGCAGGACAATGTGGATGTGATCTCACATCGAAGGCTTaGAATACAAAGGAAATAAAG | + |
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Preference number: 2 (lower is better) Translates to: IEQQHHFSHRTAGQCGCDLTSKA*NTKEIK Trigger: CTTTATTTCCTTTGTATTTCAAGCCTTCGATGTGAG...ATCACATCCACATTGTCCTGCTGTCCTATGTGAAAAATGATGTTGTTGTTCAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
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| 3UTR-3UTR TCA 90 bp | CAACAACATCATTTTTCACATAGGACAGCAGGACAATGTGGATGTGATTATGAAGAAAAGCATTCCCTTTaGACTTTGAGAACTAACAGT | + |
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Preference number: 2 (lower is better) Translates to: QQHHFSHRTAGQCGCDYEEKHSL*TLRTNS Trigger: ACTGTTAGTTCTCAAAGTTCAAAGGGAATGCTTTTC...TTCATAATCACATCCACATTGTCCTGCTGTCCTATGTGAAAAATGATGTTGTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
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| 3UTR-3UTR CCA 90 bp | CATTTTTCACATAGGACAGCAGGACAATGTGGATGTGATTATGAACTTCTCAGTATTCAACCTTCACACTaGGAGACATATAATCACATT | + |
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Preference number: 2 (lower is better) Translates to: HFSHRTAGQCGCDYELLSIQPSH*ETYNHI Trigger: AATGTGATTATATGTCTCCCAGTGTGAAGGTTGAAT...ACTGAGAAGTTCATAATCACATCCACATTGTCCTGCTGTCCTATGTGAAAAATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
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| 3UTR TCA 72 bp | AACACCCCTATTCCATCATCCCTCCCCCTTCTTCTATaGTGGTGTTCCACCTTAGGAGTCAAATGCTTACCC | + |
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Preference number: 3 (lower is better) Translates to: NTPIPSSLPLLL*WCSTLGVKCLP Trigger: GGGTAAGCATTTGACTCCTAAGGTGGAACACCATCATAGAAGAAGGGGGAGGGATGATGGAATAGGGGTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
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| 3UTR TCA 72 bp | CATGAATGGCTTCCACAAAACGGAAACTTTAGTAAATaGAAACTCAAGTCATCCGGGTCATGTATAAAGCGC | + |
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Preference number: 3 (lower is better) Translates to: HEWLPQNGNFSK*KLKSSGSCIKR Trigger: GCGCTTTATACATGACCCGGATGACTTGAGTTTTCATTTACTAAAGTTTCCGTTTTGTGGAAGCCATTCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
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| 3UTR-3UTR CAA 90 bp | CAACAACATCATTTTTCACATAGGACAGCAGGACAATGTGGATGTGATTATGAAAGGCAACAATTATTCTaGAACATGAATGGCTTCCAC | + |
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Preference number: 3 (lower is better) Translates to: QQHHFSHRTAGQCGCDYERQQLF*NMNGFH Trigger: GTGGAAGCCATTCATGTTCAAGAATAATTGTTGCCT...TTCATAATCACATCCACATTGTCCTGCTGTCCTATGTGAAAAATGATGTTGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
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| 3UTR TCA 72 bp | GAAGGGTTTCTAATTGTAAGGACTAGCCATGTTTCTTaGAATGCAGTTAATTCCTGTTATGACTCACAGCTA | + |
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Preference number: 3 (lower is better) Translates to: EGFLIVRTSHVS*NAVNSCYDSQL Trigger: TAGCTGTGAGTCATAACAGGAATTAACTGCATTTCAAGAAACATGGCTAGTCCTTACAATTAGAAACCCTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
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| CDS-3UTR CCA 90 bp | TATTCCATCATCCCTCCCCCTTCTTCTATGATGGTGTTCCACCTTAGGAGTCAAGCGGTCCTGCCCCGTTaGCTGCTGGGAGTGTGCTTA | + |
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Preference number: 4 (lower is better) Translates to: YSIIPPPSSMMVFHLRSQAVLPR*LLGVCL Trigger: TAAGCACACTCCCAGCAGCCAACGGGGCAGGACCGC...TTGACTCCTAAGGTGGAACACCATCATAGAAGAAGGGGGAGGGATGATGGAATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
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| CDS-3UTR GCA 90 bp | TATTCCATCATCCCTCCCCCTTCTTCTATGATGGTGTTCCACCTTAGGAGTCAAGTTTTGAAGCGGTCCTaGCCCGTTGGCTGCTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: YSIIPPPSSMMVFHLRSQVLKRS*PVGCWE Trigger: CTCCCAGCAGCCAACGGGGCAGGACCGCTTCAAAAC...TTGACTCCTAAGGTGGAACACCATCATAGAAGAAGGGGGAGGGATGATGGAATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
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| CDS-3UTR TCA 90 bp | GCTTTGGCCTGTGGTTTGAAGGAGAAGAGTAAGCTGTTGAAAGTTAAGTCCCACCCAGGACGTTCCCGATaGGAGCCACAACGAACACGA | + |
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Preference number: 4 (lower is better) Translates to: ALACGLKEKSKLLKVKSHPGRSR*EPQRTR Trigger: TCGTGTTCGTTGTGGCTCTCATCGGGAACGTCCTGG...GTGGGACTTAACTTTCAACAGCTTACTCTTCTCCTTCAAACCACAGGCCAAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
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| CDS-3UTR TCA 90 bp | GCTTTGGCCTGTGGTTTGAAGGAGAAGAGTAAGCTGTTGAAAGTTAAGTCCCACGTGTGCTTATGCTGGTaGGCACCACGTGCTCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: ALACGLKEKSKLLKVKSHVCLCW*APRALR Trigger: TCTCAGAGCACGTGGTGCTCACCAGCATAAGCACAC...GTGGGACTTAACTTTCAACAGCTTACTCTTCTCCTTCAAACCACAGGCCAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
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| CDS-3UTR GCA 90 bp | GAATTAGAAATGTTCAAGCCCTTAACGGCCACAACTTCAGTTCACAGAATTAAGTGCTCTCTGTGCTCGTaGGTCCCCTGGCGAGGCGGT | + |
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Preference number: 4 (lower is better) Translates to: ELEMFKPLTATTSVHRIKCSLCS*VPWRGG Trigger: ACCGCCTCGCCAGGGGACGCACGAGCACAGAGAGCA...CTTAATTCTGTGAACTGAAGTTGTGGCCGTTAAGGGCTTGAACATTTCTAATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184757.2 |
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| CDS-3UTR CCA 90 bp | GCTTTGGCCTGTGGTTTGAAGGAGAAGAGTAAGCTGTTGAAAGTTAAGTCCCACAGAGGGTGGTCTTATTaGCTAGGCCAGGGAGCATGC | + |
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Preference number: 4 (lower is better) Translates to: ALACGLKEKSKLLKVKSHRGWSY*LGQGAC Trigger: GCATGCTCCCTGGCCTAGCCAATAAGACCACCCTCT...GTGGGACTTAACTTTCAACAGCTTACTCTTCTCCTTCAAACCACAGGCCAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
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| CDS-3UTR GCA 90 bp | CAACAACATCATTTTTCACATAGGACAGCAGGACAATGTGGATGTGATTATGAATGCTCTCTGTGCTCGTaGGTCCCCTGGCGAGGCGGT | + |
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Preference number: 4 (lower is better) Translates to: QQHHFSHRTAGQCGCDYECSLCS*VPWRGG Trigger: ACCGCCTCGCCAGGGGACGCACGAGCACAGAGAGCA...TTCATAATCACATCCACATTGTCCTGCTGTCCTATGTGAAAAATGATGTTGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
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| CDS-3UTR CCA 90 bp | GAATTAGAAATGTTCAAGCCCTTAACGGCCACAACTTCAGTTCACAGAATTAAGGCGGTCCTGCCCCGTTaGCTGCTGGGAGTGTGCTTA | + |
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Preference number: 4 (lower is better) Translates to: ELEMFKPLTATTSVHRIKAVLPR*LLGVCL Trigger: TAAGCACACTCCCAGCAGCCAACGGGGCAGGACCGC...CTTAATTCTGTGAACTGAAGTTGTGGCCGTTAAGGGCTTGAACATTTCTAATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184757.2 |
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| CDS-3UTR TCA 90 bp | GCTTTGGCCTGTGGTTTGAAGGAGAAGAGTAAGCTGTTGAAAGTTAAGTCCCACCCACAACGAACACGATaGTATACCCTGCGATCAGGA | + |
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Preference number: 4 (lower is better) Translates to: ALACGLKEKSKLLKVKSHPQRTR*YTLRSG Trigger: TCCTGATCGCAGGGTATATCATCGTGTTCGTTGTGG...GTGGGACTTAACTTTCAACAGCTTACTCTTCTCCTTCAAACCACAGGCCAAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
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| CDS-3UTR GCA 90 bp | GCTTTGGCCTGTGGTTTGAAGGAGAAGAGTAAGCTGTTGAAAGTTAAGTCCCACAAGCAGATGACCAGTTaGGACGAGAGAGGGAATCCT | + |
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Preference number: 4 (lower is better) Translates to: ALACGLKEKSKLLKVKSHKQMTS*DERGNP Trigger: AGGATTCCCTCTCTCGTCGCAACTGGTCATCTGCTT...GTGGGACTTAACTTTCAACAGCTTACTCTTCTCCTTCAAACCACAGGCCAAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
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| CDS-3UTR GCA 90 bp | GAATTAGAAATGTTCAAGCCCTTAACGGCCACAACTTCAGTTCACAGAATTAAGGTTTTGAAGCGGTCCTaGCCCGTTGGCTGCTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: ELEMFKPLTATTSVHRIKVLKRS*PVGCWE Trigger: CTCCCAGCAGCCAACGGGGCAGGACCGCTTCAAAAC...CTTAATTCTGTGAACTGAAGTTGTGGCCGTTAAGGGCTTGAACATTTCTAATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184757.2 |
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| CDS-3UTR GCA 90 bp | GCTTTGGCCTGTGGTTTGAAGGAGAAGAGTAAGCTGTTGAAAGTTAAGTCCCACCACGATGATATACCCTaGGATCAGGACCCACTCATA | + |
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Preference number: 4 (lower is better) Translates to: ALACGLKEKSKLLKVKSHHDDIP*DQDPLI Trigger: TATGAGTGGGTCCTGATCGCAGGGTATATCATCGTG...GTGGGACTTAACTTTCAACAGCTTACTCTTCTCCTTCAAACCACAGGCCAAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
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| CDS-3UTR GCA 90 bp | GAATTAGAAATGTTCAAGCCCTTAACGGCCACAACTTCAGTTCACAGAATTAAGTCCTGCCCCGTTGGCTaGTGGGAGTGTGCTTATGCT | + |
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Preference number: 4 (lower is better) Translates to: ELEMFKPLTATTSVHRIKSCPVG*WECAYA Trigger: AGCATAAGCACACTCCCAGCAGCCAACGGGGCAGGA...CTTAATTCTGTGAACTGAAGTTGTGGCCGTTAAGGGCTTGAACATTTCTAATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184757.2 |
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| CDS-3UTR CCA 90 bp | GAATTAGAAATGTTCAAGCCCTTAACGGCCACAACTTCAGTTCACAGAATTAAGTGCCCCGTTGGCTGCTaGGAGTGTGCTTATGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: ELEMFKPLTATTSVHRIKCPVGC*ECAYAG Trigger: ACCAGCATAAGCACACTCCCAGCAGCCAACGGGGCA...CTTAATTCTGTGAACTGAAGTTGTGGCCGTTAAGGGCTTGAACATTTCTAATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184757.2 |
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| CDS-3UTR TCA 90 bp | GAATTAGAAATGTTCAAGCCCTTAACGGCCACAACTTCAGTTCACAGAATTAAGGTGTGCTTATGCTGGTaGGCACCACGTGCTCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: ELEMFKPLTATTSVHRIKVCLCW*APRALR Trigger: TCTCAGAGCACGTGGTGCTCACCAGCATAAGCACAC...CTTAATTCTGTGAACTGAAGTTGTGGCCGTTAAGGGCTTGAACATTTCTAATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184757.2 |
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| CDS-3UTR GCA 90 bp | CTAATGACGTTGACATCTCACATCGAAGGCTTGAAATACAAAGGAAATAAAGGTTCCTGCCCCGTTGGCTaGTGGGAGTGTGCTTATGCT | + |
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Preference number: 4 (lower is better) Translates to: LMTLTSHIEGLKYKGNKGSCPVG*WECAYA Trigger: AGCATAAGCACACTCCCAGCAGCCAACGGGGCAGGA...ACCTTTATTTCCTTTGTATTTCAAGCCTTCGATGTGAGATGTCAACGTCATTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
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| CDS-3UTR CCA 90 bp | CTAATGACGTTGACATCTCACATCGAAGGCTTGAAATACAAAGGAAATAAAGGTTGCCCCGTTGGCTGCTaGGAGTGTGCTTATGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: LMTLTSHIEGLKYKGNKGCPVGC*ECAYAG Trigger: ACCAGCATAAGCACACTCCCAGCAGCCAACGGGGCA...ACCTTTATTTCCTTTGTATTTCAAGCCTTCGATGTGAGATGTCAACGTCATTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
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| CDS-3UTR TCA 90 bp | CATTTTTCACATAGGACAGCAGGACAATGTGGATGTGATTATGAACTTCTCAGTCCAGAAGTACAACCATaGGCATCCGGGCTGTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: HFSHRTAGQCGCDYELLSPEVQP*ASGLFS Trigger: GGAAAACAGCCCGGATGCTCATGGTTGTACTTCTGG...ACTGAGAAGTTCATAATCACATCCACATTGTCCTGCTGTCCTATGTGAAAAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
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| CDS-3UTR TCA 90 bp | GAATTAGAAATGTTCAAGCCCTTAACGGCCACAACTTCAGTTCACAGAATTAAGCCAGAAGTACAACCATaGGCATCCGGGCTGTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: ELEMFKPLTATTSVHRIKPEVQP*ASGLFS Trigger: GGAAAACAGCCCGGATGCTCATGGTTGTACTTCTGG...CTTAATTCTGTGAACTGAAGTTGTGGCCGTTAAGGGCTTGAACATTTCTAATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184757.2 |
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| CDS-3UTR TCA 90 bp | GAATTAGAAATGTTCAAGCCCTTAACGGCCACAACTTCAGTTCACAGAATTAAGCCACAACGAACACGATaGTATACCCTGCGATCAGGA | + |
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Preference number: 4 (lower is better) Translates to: ELEMFKPLTATTSVHRIKPQRTR*YTLRSG Trigger: TCCTGATCGCAGGGTATATCATCGTGTTCGTTGTGG...CTTAATTCTGTGAACTGAAGTTGTGGCCGTTAAGGGCTTGAACATTTCTAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184757.2 |
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| CDS-3UTR TCA 90 bp | GAATTAGAAATGTTCAAGCCCTTAACGGCCACAACTTCAGTTCACAGAATTAAGTGCTGCTGCACTCCATaGCAATGGCTTGAGGAATCA | + |
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Preference number: 4 (lower is better) Translates to: ELEMFKPLTATTSVHRIKCCCTP*QWLEES Trigger: TGATTCCTCAAGCCATTGTCATGGAGTGCAGCAGCA...CTTAATTCTGTGAACTGAAGTTGTGGCCGTTAAGGGCTTGAACATTTCTAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184757.2 |
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| CDS-3UTR GCA 90 bp | GAATTAGAAATGTTCAAGCCCTTAACGGCCACAACTTCAGTTCACAGAATTAAGAAGCAGATGACCAGTTaGGACGAGAGAGGGAATCCT | + |
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Preference number: 4 (lower is better) Translates to: ELEMFKPLTATTSVHRIKKQMTS*DERGNP Trigger: AGGATTCCCTCTCTCGTCGCAACTGGTCATCTGCTT...CTTAATTCTGTGAACTGAAGTTGTGGCCGTTAAGGGCTTGAACATTTCTAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184757.2 |
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| CDS-3UTR GCA 90 bp | CAACAACATCATTTTTCACATAGGACAGCAGGACAATGTGGATGTGATTATGAAGTGGTTCTTCCACACTaGCACACAGACCAGGACGTT | + |
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Preference number: 4 (lower is better) Translates to: QQHHFSHRTAGQCGCDYEVVLPH*HTDQDV Trigger: AACGTCCTGGTCTGTGTGGCAGTGTGGAAGAACCAC...TTCATAATCACATCCACATTGTCCTGCTGTCCTATGTGAAAAATGATGTTGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
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| CDS-3UTR CCA 90 bp | CATTTTTCACATAGGACAGCAGGACAATGTGGATGTGATTATGAACTTCTCAGTTCAAAGGGTGACAAATaGCGTACCATCGGTCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: HFSHRTAGQCGCDYELLSSKGDK*RTIGPR Trigger: CCTTGGACCGATGGTACGCCATTTGTCACCCTTTGA...ACTGAGAAGTTCATAATCACATCCACATTGTCCTGCTGTCCTATGTGAAAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
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| CDS-3UTR CCA 90 bp | GAATTAGAAATGTTCAAGCCCTTAACGGCCACAACTTCAGTTCACAGAATTAAGTCAAAGGGTGACAAATaGCGTACCATCGGTCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: ELEMFKPLTATTSVHRIKSKGDK*RTIGPR Trigger: CCTTGGACCGATGGTACGCCATTTGTCACCCTTTGA...CTTAATTCTGTGAACTGAAGTTGTGGCCGTTAAGGGCTTGAACATTTCTAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184757.2 |
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| CDS-3UTR CCA 90 bp | ATTGAACAACAACATCATTTTTCACATAGGACAGCAGGACAATGTGGATGTGATAGACCTCCAGCCAGGTaGACAGGAGTGAAGATGGTA | + |
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Preference number: 4 (lower is better) Translates to: IEQQHHFSHRTAGQCGCDRPPAR*TGVKMV Trigger: TACCATCTTCACTCCTGTCCACCTGGCTGGAGGTCT...ATCACATCCACATTGTCCTGCTGTCCTATGTGAAAAATGATGTTGTTGTTCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
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| CDS-3UTR TCA 90 bp | TATTCCATCATCCCTCCCCCTTCTTCTATGATGGTGTTCCACCTTAGGAGTCAATTTAAAAACGGCTCTTaGGTTTCATTCAGCTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: YSIIPPPSSMMVFHLRSQFKNGS*VSFSSE Trigger: TTCAGAGCTGAATGAAACTCAAGAGCCGTTTTTAAA...TTGACTCCTAAGGTGGAACACCATCATAGAAGAAGGGGGAGGGATGATGGAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
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| CDS-3UTR TCA 90 bp | ATTGAACAACAACATCATTTTTCACATAGGACAGCAGGACAATGTGGATGTGATTGCTGCTGCACTCCATaGCAATGGCTTGAGGAATCA | + |
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Preference number: 4 (lower is better) Translates to: IEQQHHFSHRTAGQCGCDCCCTP*QWLEES Trigger: TGATTCCTCAAGCCATTGTCATGGAGTGCAGCAGCA...ATCACATCCACATTGTCCTGCTGTCCTATGTGAAAAATGATGTTGTTGTTCAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
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| CDS-3UTR TCA 90 bp | GAATTAGAAATGTTCAAGCCCTTAACGGCCACAACTTCAGTTCACAGAATTAAGCATTGTCAAAGTTGCTaGTCTGTGTGGTCAGGGACT | + |
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Preference number: 4 (lower is better) Translates to: ELEMFKPLTATTSVHRIKHCQSC*SVWSGT Trigger: AGTCCCTGACCACACAGATCAGCAACTTTGACAATG...CTTAATTCTGTGAACTGAAGTTGTGGCCGTTAAGGGCTTGAACATTTCTAATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184757.2 |
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| CDS-3UTR GCA 90 bp | GAATTAGAAATGTTCAAGCCCTTAACGGCCACAACTTCAGTTCACAGAATTAAGCACGATGATATACCCTaGGATCAGGACCCACTCATA | + |
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Preference number: 4 (lower is better) Translates to: ELEMFKPLTATTSVHRIKHDDIP*DQDPLI Trigger: TATGAGTGGGTCCTGATCGCAGGGTATATCATCGTG...CTTAATTCTGTGAACTGAAGTTGTGGCCGTTAAGGGCTTGAACATTTCTAATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184757.2 |
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| CDS-3UTR GCA 90 bp | GAATTAGAAATGTTCAAGCCCTTAACGGCCACAACTTCAGTTCACAGAATTAAGGGCTGTTTTCCTTCGTaGTCGGATCTGCTTTATCTC | + |
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Preference number: 4 (lower is better) Translates to: ELEMFKPLTATTSVHRIKGCFPS*SDLLYL Trigger: GAGATAAAGCAGATCCGAGCACGAAGGAAAACAGCC...CTTAATTCTGTGAACTGAAGTTGTGGCCGTTAAGGGCTTGAACATTTCTAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184757.2 |
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| CDS-3UTR TCA 90 bp | GAATTAGAAATGTTCAAGCCCTTAACGGCCACAACTTCAGTTCACAGAATTAAGGTTTGGCTGTGCTCTTaGACATCAAAGGGTGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: ELEMFKPLTATTSVHRIKVWLCS*TSKGDK Trigger: TTTGTCACCCTTTGATGTTCAAGAGCACAGCCAAAC...CTTAATTCTGTGAACTGAAGTTGTGGCCGTTAAGGGCTTGAACATTTCTAATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184757.2 |
||
| CDS-3UTR TCA 90 bp | GAATTAGAAATGTTCAAGCCCTTAACGGCCACAACTTCAGTTCACAGAATTAAGCTTGAGGAATCATTATaGTGCAGGAGACGATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ELEMFKPLTATTSVHRIKLEESL*CRRRSR Trigger: TCTGGATCGTCTCCTGCATCATAATGATTCCTCAAG...CTTAATTCTGTGAACTGAAGTTGTGGCCGTTAAGGGCTTGAACATTTCTAATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184757.2 |
||
| CDS-3UTR TCA 90 bp | GAATTAGAAATGTTCAAGCCCTTAACGGCCACAACTTCAGTTCACAGAATTAAGTGCTTCCATTTTCTCTaGACCACAGAAGAAGTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: ELEMFKPLTATTSVHRIKCFHFL*TTEEVP Trigger: CGGAACTTCTTCTGTGGTTCAGAGAAAATGGAAGCA...CTTAATTCTGTGAACTGAAGTTGTGGCCGTTAAGGGCTTGAACATTTCTAATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184757.2 |
||
| CDS-3UTR TCA 90 bp | CATTTTTCACATAGGACAGCAGGACAATGTGGATGTGATTATGAACTTCTCAGTTGTCTTCCGTGTGTGTaGACATCCCAAATACTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HFSHRTAGQCGCDYELLSCLPCV*TSQILS Trigger: AGAGAGTATTTGGGATGTTCACACACACGGAAGACA...ACTGAGAAGTTCATAATCACATCCACATTGTCCTGCTGTCCTATGTGAAAAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
||
| CDS-3UTR TCA 90 bp | GAATTAGAAATGTTCAAGCCCTTAACGGCCACAACTTCAGTTCACAGAATTAAGTGTCTTCCGTGTGTGTaGACATCCCAAATACTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ELEMFKPLTATTSVHRIKCLPCV*TSQILS Trigger: AGAGAGTATTTGGGATGTTCACACACACGGAAGACA...CTTAATTCTGTGAACTGAAGTTGTGGCCGTTAAGGGCTTGAACATTTCTAATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184757.2 |
||
| CDS-3UTR TCA 90 bp | CAACAACATCATTTTTCACATAGGACAGCAGGACAATGTGGATGTGATTATGAACATTGTCAAAGTTGCTaGTCTGTGTGGTCAGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: QQHHFSHRTAGQCGCDYEHCQSC*SVWSGT Trigger: AGTCCCTGACCACACAGATCAGCAACTTTGACAATG...TTCATAATCACATCCACATTGTCCTGCTGTCCTATGTGAAAAATGATGTTGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
||
| CDS-3UTR GCA 90 bp | CTAATGACGTTGACATCTCACATCGAAGGCTTGAAATACAAAGGAAATAAAGGTGGCTGTTTTCCTTCGTaGTCGGATCTGCTTTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: LMTLTSHIEGLKYKGNKGGCFPS*SDLLYL Trigger: GAGATAAAGCAGATCCGAGCACGAAGGAAAACAGCC...ACCTTTATTTCCTTTGTATTTCAAGCCTTCGATGTGAGATGTCAACGTCATTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
||
| CDS-3UTR CCA 90 bp | CATTTTTCACATAGGACAGCAGGACAATGTGGATGTGATTATGAACTTCTCAGTCGTCGTCATAGTCCGTaGGATTTAAAAACGGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HFSHRTAGQCGCDYELLSRRHSP*DLKTAL Trigger: AAGAGCCGTTTTTAAATCCCACGGACTATGACGACG...ACTGAGAAGTTCATAATCACATCCACATTGTCCTGCTGTCCTATGTGAAAAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
||
| CDS-3UTR CCA 90 bp | GAATTAGAAATGTTCAAGCCCTTAACGGCCACAACTTCAGTTCACAGAATTAAGCGTCGTCATAGTCCGTaGGATTTAAAAACGGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ELEMFKPLTATTSVHRIKRRHSP*DLKTAL Trigger: AAGAGCCGTTTTTAAATCCCACGGACTATGACGACG...CTTAATTCTGTGAACTGAAGTTGTGGCCGTTAAGGGCTTGAACATTTCTAATTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184757.2 |
||
| CDS-3UTR TCA 90 bp | GAATTAGAAATGTTCAAGCCCTTAACGGCCACAACTTCAGTTCACAGAATTAAGTCTGTAAATAAGGAATaGCCTTACAGAGGGACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ELEMFKPLTATTSVHRIKSVNKE*PYRGTV Trigger: GACAGTCCCTCTGTAAGGTCATTCCTTATTTACAGA...CTTAATTCTGTGAACTGAAGTTGTGGCCGTTAAGGGCTTGAACATTTCTAATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184757.2 |
||
| CDS-3UTR TCA 90 bp | ATTGAACAACAACATCATTTTTCACATAGGACAGCAGGACAATGTGGATGTGATGTTTGGCTGTGCTCTTaGACATCAAAGGGTGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: IEQQHHFSHRTAGQCGCDVWLCS*TSKGDK Trigger: TTTGTCACCCTTTGATGTTCAAGAGCACAGCCAAAC...ATCACATCCACATTGTCCTGCTGTCCTATGTGAAAAATGATGTTGTTGTTCAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
||
| CDS-3UTR TCA 90 bp | CTAATGACGTTGACATCTCACATCGAAGGCTTGAAATACAAAGGAAATAAAGGTCTTGAGGAATCATTATaGTGCAGGAGACGATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LMTLTSHIEGLKYKGNKGLEESL*CRRRSR Trigger: TCTGGATCGTCTCCTGCATCATAATGATTCCTCAAG...ACCTTTATTTCCTTTGTATTTCAAGCCTTCGATGTGAGATGTCAACGTCATTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
||
| CDS-3UTR TCA 90 bp | CATTTTTCACATAGGACAGCAGGACAATGTGGATGTGATTATGAACTTCTCAGTTCCATGACAATGGCTTaGGGAATCATTATGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HFSHRTAGQCGCDYELLSSMTMA*GIIMMQ Trigger: CTGCATCATAATGATTCCTCAAGCCATTGTCATGGA...ACTGAGAAGTTCATAATCACATCCACATTGTCCTGCTGTCCTATGTGAAAAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
||
| CDS-3UTR TCA 90 bp | GAATTAGAAATGTTCAAGCCCTTAACGGCCACAACTTCAGTTCACAGAATTAAGTCCATGACAATGGCTTaGGGAATCATTATGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ELEMFKPLTATTSVHRIKSMTMA*GIIMMQ Trigger: CTGCATCATAATGATTCCTCAAGCCATTGTCATGGA...CTTAATTCTGTGAACTGAAGTTGTGGCCGTTAAGGGCTTGAACATTTCTAATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184757.2 |
||
| CDS-3UTR TCA 90 bp | CAACAACATCATTTTTCACATAGGACAGCAGGACAATGTGGATGTGATTATGAATGCTTCCATTTTCTCTaGACCACAGAAGAAGTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: QQHHFSHRTAGQCGCDYECFHFL*TTEEVP Trigger: CGGAACTTCTTCTGTGGTTCAGAGAAAATGGAAGCA...TTCATAATCACATCCACATTGTCCTGCTGTCCTATGTGAAAAATGATGTTGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
||
| CDS-3UTR TCA 90 bp | GAATTAGAAATGTTCAAGCCCTTAACGGCCACAACTTCAGTTCACAGAATTAAGGCCAATGAGAAAAAGTaGACCAAGCATAGACAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ELEMFKPLTATTSVHRIKANEKK*TKHRQS Trigger: AGACTGTCTATGCTTGGTTCACTTTTTCTCATTGGC...CTTAATTCTGTGAACTGAAGTTGTGGCCGTTAAGGGCTTGAACATTTCTAATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184757.2 |
||
| CDS-3UTR TCA 90 bp | CTAATGACGTTGACATCTCACATCGAAGGCTTGAAATACAAAGGAAATAAAGGTTCTGTAAATAAGGAATaGCCTTACAGAGGGACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LMTLTSHIEGLKYKGNKGSVNKE*PYRGTV Trigger: GACAGTCCCTCTGTAAGGTCATTCCTTATTTACAGA...ACCTTTATTTCCTTTGTATTTCAAGCCTTCGATGTGAGATGTCAACGTCATTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
||
| CDS-3UTR TCA 90 bp | ATTGAACAACAACATCATTTTTCACATAGGACAGCAGGACAATGTGGATGTGATGCCAATGAGAAAAAGTaGACCAAGCATAGACAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IEQQHHFSHRTAGQCGCDANEKK*TKHRQS Trigger: AGACTGTCTATGCTTGGTTCACTTTTTCTCATTGGC...ATCACATCCACATTGTCCTGCTGTCCTATGTGAAAAATGATGTTGTTGTTCAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
||
| CDS-3UTR TCA 90 bp | GAATTAGAAATGTTCAAGCCCTTAACGGCCACAACTTCAGTTCACAGAATTAAGGCATATACAAGCCAATaGGAAAAAGTGAACCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ELEMFKPLTATTSVHRIKAYTSQ*EKVNQA Trigger: TGCTTGGTTCACTTTTTCTCATTGGCTTGTATATGC...CTTAATTCTGTGAACTGAAGTTGTGGCCGTTAAGGGCTTGAACATTTCTAATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184757.2 |
||
| CDS-3UTR TCA 90 bp | GAATTAGAAATGTTCAAGCCCTTAACGGCCACAACTTCAGTTCACAGAATTAAGTTTAAAAACGGCTCTTaGGTTTCATTCAGCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ELEMFKPLTATTSVHRIKFKNGS*VSFSSE Trigger: TTCAGAGCTGAATGAAACTCAAGAGCCGTTTTTAAA...CTTAATTCTGTGAACTGAAGTTGTGGCCGTTAAGGGCTTGAACATTTCTAATTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184757.2 |
||
| CDS-3UTR TCA 90 bp | CAACAACATCATTTTTCACATAGGACAGCAGGACAATGTGGATGTGATTATGAAGCATATACAAGCCAATaGGAAAAAGTGAACCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QQHHFSHRTAGQCGCDYEAYTSQ*EKVNQA Trigger: TGCTTGGTTCACTTTTTCTCATTGGCTTGTATATGC...TTCATAATCACATCCACATTGTCCTGCTGTCCTATGTGAAAAATGATGTTGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
||
| 3UTR CAA 72 bp | ACAAAACTAATGACGTTGACATCTCACATCGAAGGCTaGAAATACAAAGGAAATAAAGGTAGGTCAATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TKLMTLTSHIEG*KYKGNKGRSMS Trigger: GGACATTGACCTACCTTTATTTCCTTTGTATTTCAAGCCTTCGATGTGAGATGTCAACGTCATTAGTTTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
||
| CDS-3UTR GCA 90 bp | GAATTAGAAATGTTCAAGCCCTTAACGGCCACAACTTCAGTTCACAGAATTAAGATAAATAATTGGGTTTaGAGCACTGTTGGCATATAC | + |
|
Preference number: 4 (lower is better) Translates to: ELEMFKPLTATTSVHRIKINNWV*STVGIY Trigger: GTATATGCCAACAGTGCTGCAAACCCAATTATTTAT...CTTAATTCTGTGAACTGAAGTTGTGGCCGTTAAGGGCTTGAACATTTCTAATTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184757.2 |
||
| CDS-3UTR GCA 90 bp | CTAATGACGTTGACATCTCACATCGAAGGCTTGAAATACAAAGGAAATAAAGGTATAAATAATTGGGTTTaGAGCACTGTTGGCATATAC | + |
|
Preference number: 4 (lower is better) Translates to: LMTLTSHIEGLKYKGNKGINNWV*STVGIY Trigger: GTATATGCCAACAGTGCTGCAAACCCAATTATTTAT...ACCTTTATTTCCTTTGTATTTCAAGCCTTCGATGTGAGATGTCAACGTCATTAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
||
| CDS CCA 90 bp | TCTGTGTGGTCAGGGACTTCCTGCTCTCTGTGCTCGTGCGTCCCCTaGCGAGGCGGTCTCCTTGGCGATGATGAACCCCAAGACAACAAG | + |
|
Preference number: 5 (lower is better) Translates to: SVWSGTSCSLCSCVP*RGGLLGDDEPQDNK Trigger: CTTGTTGTCTTGGGGTTCATCATCGCCAAGGAGACCGCCTCGCCAGGGGACGCACGAGCACAGAGAGCAGGAAGTCCCTGACCACACAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063140.15 ENSMUST00000184757.2 |
||
| CDS TCA 90 bp | GTGGACAGGAGTGAAGATGGTACTCCCTGCTGTAGATACCAGTTTTaGAGCGGTCCTGCCCCGTTGGCTGCTGGGAGTGTGCTTATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VDRSEDGTPCCRYQF*SGPAPLAAGSVLML Trigger: CAGCATAAGCACACTCCCAGCAGCCAACGGGGCAGGACCGCTTCAAAACTGGTATCTACAGCAGGGAGTACCATCTTCACTCCTGTCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
||
| CDS TCA 90 bp | GAAGCGGTCCTGCCCCGTTGGCTGCTGGGAGTGTGCTTATGCTGGTaGGCACCACGTGCTCTGAGAGTTTTGATACATTGTCAAAGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: EAVLPRWLLGVCLCW*APRALRVLIHCQSC Trigger: GCAACTTTGACAATGTATCAAAACTCTCAGAGCACGTGGTGCTCACCAGCATAAGCACACTCCCAGCAGCCAACGGGGCAGGACCGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063140.15 ENSMUST00000184757.2 |
||
| CDS GCA 90 bp | AGTACAACCATGAGCATCCGGGCTGTTTTCCTTCGTGCTCGGATCTaGTTTATCTCAGCAGCAACAGCGCTAATCCGAGCCTTGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: STTMSIRAVFLRARI*FISAATALIRALLC Trigger: GCAGAGCAAGGCTCGGATTAGCGCTGTTGCTGCTGAGATAAAGCAGATCCGAGCACGAAGGAAAACAGCCCGGATGCTCATGGTTGTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063140.15 ENSMUST00000184757.2 |
||
| CDS TCA 90 bp | TTGGCTAGGCCAGGGAGCATGCTGCTGCACTCCATGACAATGGCTTaGGGAATCATTATGATGCAGGAGACGATCCAGATGACAACGATG | + |
|
Preference number: 5 (lower is better) Translates to: LARPGSMLLHSMTMA*GIIMMQETIQMTTM Trigger: CATCGTTGTCATCTGGATCGTCTCCTGCATCATAATGATTCCTCAAGCCATTGTCATGGAGTGCAGCAGCATGCTCCCTGGCCTAGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063140.15 ENSMUST00000184757.2 |
||
| CDS GCA 90 bp | AAAGACCAGAAGTACAACCATGAGCATCCGGGCTGTTTTCCTTCGTaGTCGGATCTGCTTTATCTCAGCAGCAACAGCGCTAATCCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KDQKYNHEHPGCFPS*SDLLYLSSNSANPS Trigger: GCTCGGATTAGCGCTGTTGCTGCTGAGATAAAGCAGATCCGAGCACGAAGGAAAACAGCCCGGATGCTCATGGTTGTACTTCTGGTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063140.15 ENSMUST00000184757.2 |
||
| CDS CCA 90 bp | ATTCCCTCCACAGGTACCGCAGGAATTCCTCGTCGTCATAGTCCGTaGGATTTAAAAACGGCTCTTGAGTTTCATTCAGCTCTGAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: IPSTGTAGIPRRHSP*DLKTALEFHSALKQ Trigger: CTGCTTCAGAGCTGAATGAAACTCAAGAGCCGTTTTTAAATCCCACGGACTATGACGACGAGGAATTCCTGCGGTACCTGTGGAGGGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063140.15 ENSMUST00000184757.2 |
||
| CDS-3UTR CAA 90 bp | CATTTTTCACATAGGACAGCAGGACAATGTGGATGTGATTATGAACTTCTCAGTGAAGCAGATGACCAGTaGCGACGAGAGAGGGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: HFSHRTAGQCGCDYELLSEADDQ*RRERES Trigger: GGATTCCCTCTCTCGTCGCAACTGGTCATCTGCTTC...ACTGAGAAGTTCATAATCACATCCACATTGTCCTGCTGTCCTATGTGAAAAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
||
| CDS-3UTR CAA 90 bp | GAATTAGAAATGTTCAAGCCCTTAACGGCCACAACTTCAGTTCACAGAATTAAGGAAGCAGATGACCAGTaGCGACGAGAGAGGGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: ELEMFKPLTATTSVHRIKEADDQ*RRERES Trigger: GGATTCCCTCTCTCGTCGCAACTGGTCATCTGCTTC...CTTAATTCTGTGAACTGAAGTTGTGGCCGTTAAGGGCTTGAACATTTCTAATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184757.2 |
||
| CDS-3UTR CAA 90 bp | GAATTAGAAATGTTCAAGCCCTTAACGGCCACAACTTCAGTTCACAGAATTAAGAAGAGGGTGGTCTTATaGGCTAGGCCAGGGAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: ELEMFKPLTATTSVHRIKKRVVL*ARPGSM Trigger: CATGCTCCCTGGCCTAGCCAATAAGACCACCCTCTT...CTTAATTCTGTGAACTGAAGTTGTGGCCGTTAAGGGCTTGAACATTTCTAATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184757.2 |
||
| CDS CCA 90 bp | AGGTGCCATGTATGTCACCAGAAAGAAGCAGATATGGTACATCTTTaGGTAAACTTCACCGCCCCAGTGTTCATCACATACTGTAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RCHVCHQKEADMVHL*VNFTAPVFITYCKE Trigger: CTCTTTACAGTATGTGATGAACACTGGGGCGGTGAAGTTTACCCAAAGATGTACCATATCTGCTTCTTTCTGGTGACATACATGGCACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063140.15 ENSMUST00000184757.2 |
||
| CDS-3UTR CAA 90 bp | GAATTAGAAATGTTCAAGCCCTTAACGGCCACAACTTCAGTTCACAGAATTAAGCTGTTTCGAGCCCGTTaGGCTGTGCTCTTGAACATC | + |
|
Preference number: 5 (lower is better) Translates to: ELEMFKPLTATTSVHRIKLFRAR*AVLLNI Trigger: GATGTTCAAGAGCACAGCCAAACGGGCTCGAAACAG...CTTAATTCTGTGAACTGAAGTTGTGGCCGTTAAGGGCTTGAACATTTCTAATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184757.2 |
||
| CDS-3UTR CAA 90 bp | CAACAACATCATTTTTCACATAGGACAGCAGGACAATGTGGATGTGATTATGAAAAGAGGGTGGTCTTATaGGCTAGGCCAGGGAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: QQHHFSHRTAGQCGCDYEKRVVL*ARPGSM Trigger: CATGCTCCCTGGCCTAGCCAATAAGACCACCCTCTT...TTCATAATCACATCCACATTGTCCTGCTGTCCTATGTGAAAAATGATGTTGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
||
| CDS-3UTR CAA 90 bp | CAACAACATCATTTTTCACATAGGACAGCAGGACAATGTGGATGTGATTATGAACTGTTTCGAGCCCGTTaGGCTGTGCTCTTGAACATC | + |
|
Preference number: 5 (lower is better) Translates to: QQHHFSHRTAGQCGCDYELFRAR*AVLLNI Trigger: GATGTTCAAGAGCACAGCCAAACGGGCTCGAAACAG...TTCATAATCACATCCACATTGTCCTGCTGTCCTATGTGAAAAATGATGTTGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
||
| CDS-3UTR CAA 90 bp | GAATTAGAAATGTTCAAGCCCTTAACGGCCACAACTTCAGTTCACAGAATTAAGAGATATGGTACATCTTaGGGTAAACTTCACCGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: ELEMFKPLTATTSVHRIKRYGTS*GKLHRP Trigger: GGGGCGGTGAAGTTTACCCAAAGATGTACCATATCT...CTTAATTCTGTGAACTGAAGTTGTGGCCGTTAAGGGCTTGAACATTTCTAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184757.2 |
||
| CDS-3UTR CAA 90 bp | GCTTTGGCCTGTGGTTTGAAGGAGAAGAGTAAGCTGTTGAAAGTTAAGTCCCACGAGAGTTTTGATACATaGTCAAAGTTGCTGATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ALACGLKEKSKLLKVKSHESFDT*SKLLIC Trigger: ACAGATCAGCAACTTTGACAATGTATCAAAACTCTC...GTGGGACTTAACTTTCAACAGCTTACTCTTCTCCTTCAAACCACAGGCCAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
||
| CDS-3UTR CAA 90 bp | CTAATGACGTTGACATCTCACATCGAAGGCTTGAAATACAAAGGAAATAAAGGTAGATATGGTACATCTTaGGGTAAACTTCACCGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LMTLTSHIEGLKYKGNKGRYGTS*GKLHRP Trigger: GGGGCGGTGAAGTTTACCCAAAGATGTACCATATCT...ACCTTTATTTCCTTTGTATTTCAAGCCTTCGATGTGAGATGTCAACGTCATTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
||
| CDS-3UTR CAA 90 bp | GAATTAGAAATGTTCAAGCCCTTAACGGCCACAACTTCAGTTCACAGAATTAAGACTCTCTTTAGCACATaGAGGATGCTGATTGGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: ELEMFKPLTATTSVHRIKTLFST*RMLIGR Trigger: TCTACCAATCAGCATCCTCAATGTGCTAAAGAGAGT...CTTAATTCTGTGAACTGAAGTTGTGGCCGTTAAGGGCTTGAACATTTCTAATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184757.2 |
||
| CDS-3UTR CAA 90 bp | CATTTTTCACATAGGACAGCAGGACAATGTGGATGTGATTATGAACTTCTCAGTCGTGCTCTGAGAGTTTaGATACATTGTCAAAGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: HFSHRTAGQCGCDYELLSRALRV*IHCQSC Trigger: GCAACTTTGACAATGTATCAAAACTCTCAGAGCACG...ACTGAGAAGTTCATAATCACATCCACATTGTCCTGCTGTCCTATGTGAAAAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
||
| CDS-3UTR CAA 90 bp | GAATTAGAAATGTTCAAGCCCTTAACGGCCACAACTTCAGTTCACAGAATTAAGCGTGCTCTGAGAGTTTaGATACATTGTCAAAGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: ELEMFKPLTATTSVHRIKRALRV*IHCQSC Trigger: GCAACTTTGACAATGTATCAAAACTCTCAGAGCACG...CTTAATTCTGTGAACTGAAGTTGTGGCCGTTAAGGGCTTGAACATTTCTAATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184757.2 |
||
| CDS GCA 90 bp | TTTACGGAATATTTGGAGATAAGCCAATATCATAAGACACAGAGGTaGCATGTATGTCACCAGAAAGAAGCAGATATGGTACATCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: FTEYLEISQYHKTQR*HVCHQKEADMVHLW Trigger: CCAAAGATGTACCATATCTGCTTCTTTCTGGTGACATACATGGCACCTCTGTGTCTTATGATATTGGCTTATCTCCAAATATTCCGTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063140.15 ENSMUST00000184757.2 |
||
| CDS-3UTR CAA 90 bp | ATTGAACAACAACATCATTTTTCACATAGGACAGCAGGACAATGTGGATGTGATCTCCATGACAATGGCTaGAGGAATCATTATGATGCA | + |
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Preference number: 5 (lower is better) Translates to: IEQQHHFSHRTAGQCGCDLHDNG*RNHYDA Trigger: TGCATCATAATGATTCCTCAAGCCATTGTCATGGAG...ATCACATCCACATTGTCCTGCTGTCCTATGTGAAAAATGATGTTGTTGTTCAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
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| CDS-3UTR CAA 90 bp | CAACAACATCATTTTTCACATAGGACAGCAGGACAATGTGGATGTGATTATGAAACTCTCTTTAGCACATaGAGGATGCTGATTGGTAGA | + |
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Preference number: 5 (lower is better) Translates to: QQHHFSHRTAGQCGCDYETLFST*RMLIGR Trigger: TCTACCAATCAGCATCCTCAATGTGCTAAAGAGAGT...TTCATAATCACATCCACATTGTCCTGCTGTCCTATGTGAAAAATGATGTTGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
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| CDS-3UTR CAA 90 bp | GAATTAGAAATGTTCAAGCCCTTAACGGCCACAACTTCAGTTCACAGAATTAAGTTGGTAGATAGCAAATaGCAAAGACCAGAAGTACAA | + |
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Preference number: 5 (lower is better) Translates to: ELEMFKPLTATTSVHRIKLVDSK*QRPEVQ Trigger: TTGTACTTCTGGTCTTTGCAATTTGCTATCTACCAA...CTTAATTCTGTGAACTGAAGTTGTGGCCGTTAAGGGCTTGAACATTTCTAATTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184757.2 |
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| CDS-3UTR CAA 90 bp | GAATTAGAAATGTTCAAGCCCTTAACGGCCACAACTTCAGTTCACAGAATTAAGGAGAGTTTTGATACATaGTCAAAGTTGCTGATCTGT | + |
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Preference number: 5 (lower is better) Translates to: ELEMFKPLTATTSVHRIKESFDT*SKLLIC Trigger: ACAGATCAGCAACTTTGACAATGTATCAAAACTCTC...CTTAATTCTGTGAACTGAAGTTGTGGCCGTTAAGGGCTTGAACATTTCTAATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184757.2 |
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| CDS-3UTR CAA 90 bp | CAACAACATCATTTTTCACATAGGACAGCAGGACAATGTGGATGTGATTATGAATTGGTAGATAGCAAATaGCAAAGACCAGAAGTACAA | + |
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Preference number: 5 (lower is better) Translates to: QQHHFSHRTAGQCGCDYELVDSK*QRPEVQ Trigger: TTGTACTTCTGGTCTTTGCAATTTGCTATCTACCAA...TTCATAATCACATCCACATTGTCCTGCTGTCCTATGTGAAAAATGATGTTGTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
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| CDS GCA 72 bp | TCTGTGTGGTCAGGGACTTCCTGCTCTCTGTGCTCGTaGGTCCCCTGGCGAGGCGGTCTCCTTGGCGATGAT | + |
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Preference number: 6 (lower is better) Translates to: SVWSGTSCSLCS*VPWRGGLLGDD Trigger: ATCATCGCCAAGGAGACCGCCTCGCCAGGGGACGCACGAGCACAGAGAGCAGGAAGTCCCTGACCACACAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063140.15 ENSMUST00000184757.2 |
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| CDS CCA 72 bp | TCAGGGACTTCCTGCTCTCTGTGCTCGTGCGTCCCCTaGCGAGGCGGTCTCCTTGGCGATGATGAACCCCAA | + |
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Preference number: 6 (lower is better) Translates to: SGTSCSLCSCVP*RGGLLGDDEPQ Trigger: TTGGGGTTCATCATCGCCAAGGAGACCGCCTCGCCAGGGGACGCACGAGCACAGAGAGCAGGAAGTCCCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063140.15 ENSMUST00000184757.2 |
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| CDS TCA 72 bp | AGTGAAGATGGTACTCCCTGCTGTAGATACCAGTTTTaGAGCGGTCCTGCCCCGTTGGCTGCTGGGAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: SEDGTPCCRYQF*SGPAPLAAGSV Trigger: CACACTCCCAGCAGCCAACGGGGCAGGACCGCTTCAAAACTGGTATCTACAGCAGGGAGTACCATCTTCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063140.15 |
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| CDS TCA 72 bp | CTGCCCCGTTGGCTGCTGGGAGTGTGCTTATGCTGGTaGGCACCACGTGCTCTGAGAGTTTTGATACATTGT | + |
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Preference number: 6 (lower is better) Translates to: LPRWLLGVCLCW*APRALRVLIHC Trigger: ACAATGTATCAAAACTCTCAGAGCACGTGGTGCTCACCAGCATAAGCACACTCCCAGCAGCCAACGGGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063140.15 ENSMUST00000184757.2 |
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| CDS GCA 72 bp | ATGAGCATCCGGGCTGTTTTCCTTCGTGCTCGGATCTaGTTTATCTCAGCAGCAACAGCGCTAATCCGAGCC | + |
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Preference number: 6 (lower is better) Translates to: MSIRAVFLRARI*FISAATALIRA Trigger: GGCTCGGATTAGCGCTGTTGCTGCTGAGATAAAGCAGATCCGAGCACGAAGGAAAACAGCCCGGATGCTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063140.15 ENSMUST00000184757.2 |
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| CDS CAA 90 bp | TCACCGCCCCAGTGTTCATCACATACTGTAAAGAGGGTGGTCTTATaGGCTAGGCCAGGGAGCATGCTGCTGCACTCCATGACAATGGCT | + |
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Preference number: 6 (lower is better) Translates to: SPPQCSSHTVKRVVL*ARPGSMLLHSMTMA Trigger: AGCCATTGTCATGGAGTGCAGCAGCATGCTCCCTGGCCTAGCCAATAAGACCACCCTCTTTACAGTATGTGATGAACACTGGGGCGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063140.15 ENSMUST00000184757.2 |
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| CDS TCA 72 bp | CCAGGGAGCATGCTGCTGCACTCCATGACAATGGCTTaGGGAATCATTATGATGCAGGAGACGATCCAGATG | + |
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Preference number: 6 (lower is better) Translates to: PGSMLLHSMTMA*GIIMMQETIQM Trigger: CATCTGGATCGTCTCCTGCATCATAATGATTCCTCAAGCCATTGTCATGGAGTGCAGCAGCATGCTCCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063140.15 ENSMUST00000184757.2 |
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| CDS GCA 72 bp | CTTGAGTTTCATTCAGCTCTGAAGCAGATGACCAGTTaGGACGAGAGAGGGAATCCTCCAGTTTGGTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: LEFHSALKQMTS*DERGNPPVWCW Trigger: CCAGCACCAAACTGGAGGATTCCCTCTCTCGTCGCAACTGGTCATCTGCTTCAGAGCTGAATGAAACTCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063140.15 ENSMUST00000184757.2 |
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| CDS GCA 72 bp | AAGTACAACCATGAGCATCCGGGCTGTTTTCCTTCGTaGTCGGATCTGCTTTATCTCAGCAGCAACAGCGCT | + |
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Preference number: 6 (lower is better) Translates to: KYNHEHPGCFPS*SDLLYLSSNSA Trigger: AGCGCTGTTGCTGCTGAGATAAAGCAGATCCGAGCACGAAGGAAAACAGCCCGGATGCTCATGGTTGTACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063140.15 ENSMUST00000184757.2 |
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| CDS CAA 72 bp | GCCAGGGAGCATGCTGCTGCACTCCATGACAATGGCTaGAGGAATCATTATGATGCAGGAGACGATCCAGAT | + |
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Preference number: 6 (lower is better) Translates to: AREHAAALHDNG*RNHYDAGDDPD Trigger: ATCTGGATCGTCTCCTGCATCATAATGATTCCTCAAGCCATTGTCATGGAGTGCAGCAGCATGCTCCCTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063140.15 ENSMUST00000184757.2 |
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| CDS CAA 72 bp | CAGTGTTCATCACATACTGTAAAGAGGGTGGTCTTATaGGCTAGGCCAGGGAGCATGCTGCTGCACTCCATG | + |
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Preference number: 6 (lower is better) Translates to: QCSSHTVKRVVL*ARPGSMLLHSM Trigger: CATGGAGTGCAGCAGCATGCTCCCTGGCCTAGCCAATAAGACCACCCTCTTTACAGTATGTGATGAACACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063140.15 ENSMUST00000184757.2 |
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| CDS TCA 72 bp | CGTGCTCTGAGAGTTTTGATACATTGTCAAAGTTGCTaGTCTGTGTGGTCAGGGACTTCCTGCTCTCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: RALRVLIHCQSC*SVWSGTSCSLC Trigger: GCACAGAGAGCAGGAAGTCCCTGACCACACAGATCAGCAACTTTGACAATGTATCAAAACTCTCAGAGCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063140.15 ENSMUST00000184757.2 |
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| CDS CAA 72 bp | ACCACGTGCTCTGAGAGTTTTGATACATTGTCAAAGTaGCTGATCTGTGTGGTCAGGGACTTCCTGCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: TTCSESFDTLSK*LICVVRDFLLS Trigger: AGAGAGCAGGAAGTCCCTGACCACACAGATCAGCAACTTTGACAATGTATCAAAACTCTCAGAGCACGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063140.15 ENSMUST00000184757.2 |
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| CDS CAA 72 bp | TCCGGGAATCTGTCGGCACCAGAGTTTACGGAATATTaGGAGATAAGCCAATATCATAAGACACAGAGGTGC | + |
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Preference number: 6 (lower is better) Translates to: SGNLSAPEFTEY*EISQYHKTQRC Trigger: GCACCTCTGTGTCTTATGATATTGGCTTATCTCCAAATATTCCGTAAACTCTGGTGCCGACAGATTCCCGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063140.15 ENSMUST00000184757.2 |
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| CDS TCA 72 bp | CAGCACTGTTGGCATATACAAGCCAATGAGAAAAAGTaGACCAAGCATAGACAGTCTCTCTGTCTTCCGTGT | + |
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Preference number: 6 (lower is better) Translates to: QHCWHIQANEKK*TKHRQSLCLPC Trigger: ACACGGAAGACAGAGAGACTGTCTATGCTTGGTTCACTTTTTCTCATTGGCTTGTATATGCCAACAGTGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063140.15 ENSMUST00000184757.2 |
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| CDS CCA 72 bp | GTATGTCACCAGAAAGAAGCAGATATGGTACATCTTTaGGTAAACTTCACCGCCCCAGTGTTCATCACATAC | + |
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Preference number: 6 (lower is better) Translates to: VCHQKEADMVHL*VNFTAPVFITY Trigger: GTATGTGATGAACACTGGGGCGGTGAAGTTTACCCAAAGATGTACCATATCTGCTTCTTTCTGGTGACATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063140.15 ENSMUST00000184757.2 |
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| CDS CAA 72 bp | TGTATGTCACCAGAAAGAAGCAGATATGGTACATCTTaGGGTAAACTTCACCGCCCCAGTGTTCATCACATA | + |
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Preference number: 6 (lower is better) Translates to: CMSPERSRYGTS*GKLHRPSVHHI Trigger: TATGTGATGAACACTGGGGCGGTGAAGTTTACCCAAAGATGTACCATATCTGCTTCTTTCTGGTGACATACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063140.15 ENSMUST00000184757.2 |
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