Pregenerated sensors for HCRTR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028778Ensembl transcript IDs: ENSMUST00000030562.13, ENSMUST00000119423.8, ENSMUST00000120154.9, ENSMUST00000164887.3
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCATCGCACAGCCTCTCACTGAACCGCAGCAGTCTTCCTGTGACTaGTGGGGTGGACCCCAGGCAAAGGACCAGGTCTCCCAGAGCCTG | + |
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Preference number: 1 (lower is better) Translates to: GIAQPLTEPQQSSCD*WGGPQAKDQVSQSL Trigger: CAGGCTCTGGGAGACCTGGTCCTTTGCCTGGGGTCCACCCCAGCAGTCACAGGAAGACTGCTGCGGTTCAGTGAGAGGCTGTGCGATGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR CCA 90 bp | ATCGCACAGCCTCTCACTGAACCGCAGCAGTCTTCCTGTGACTGCTaGGGTGGACCCCAGGCAAAGGACCAGGTCTCCCAGAGCCTGGGC | + |
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Preference number: 1 (lower is better) Translates to: IAQPLTEPQQSSCDC*GGPQAKDQVSQSLG Trigger: GCCCAGGCTCTGGGAGACCTGGTCCTTTGCCTGGGGTCCACCCCAGCAGTCACAGGAAGACTGCTGCGGTTCAGTGAGAGGCTGTGCGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR TCA 90 bp | AACAGGCCATGTGCAGTCCCGGCTTCCAGTGGTCTTCAGGCCAGGTaGATATGTCTGTGGGGACCTTTGGAGCAGACTCCAGGCAGGAAA | + |
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Preference number: 1 (lower is better) Translates to: NRPCAVPASSGLQAR*ICLWGPLEQTPGRK Trigger: TTTCCTGCCTGGAGTCTGCTCCAAAGGTCCCCACAGACATATTCACCTGGCCTGAAGACCACTGGAAGCCGGGACTGCACATGGCCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR TCA 90 bp | CACCTGGAGAGGGTAGACCGTGCTTCAGAGCTCACTGAGAAGGGCTaGGCCCAAATTAGTTCACAGGGACACATTGGTGCAACAGGCCAT | + |
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Preference number: 1 (lower is better) Translates to: HLERVDRASELTEKG*AQISSQGHIGATGH Trigger: ATGGCCTGTTGCACCAATGTGTCCCTGTGAACTAATTTGGGCTCAGCCCTTCTCAGTGAGCTCTGAAGCACGGTCTACCCTCTCCAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR GCA 90 bp | GAGCCCAAATTAGTTCACAGGGACACATTGGTGCAACAGGCCATGTaGAGTCCCGGCTTCCAGTGGTCTTCAGGCCAGGTGAATATGTCT | + |
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Preference number: 1 (lower is better) Translates to: EPKLVHRDTLVQQAM*SPGFQWSSGQVNMS Trigger: AGACATATTCACCTGGCCTGAAGACCACTGGAAGCCGGGACTGCACATGGCCTGTTGCACCAATGTGTCCCTGTGAACTAATTTGGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR TCA 90 bp | TGTGGGGACCTTTGGAGCAGACTCCAGGCAGGAAAGGCCTATAATTaGGTAGGAGTCAGGTCTTTGGGAGGAAAGCCAAGCTCTGATAGG | + |
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Preference number: 1 (lower is better) Translates to: CGDLWSRLQAGKAYN*VGVRSLGGKPSSDR Trigger: CCTATCAGAGCTTGGCTTTCCTCCCAAAGACCTGACTCCTACTCAATTATAGGCCTTTCCTGCCTGGAGTCTGCTCCAAAGGTCCCCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR CCA 90 bp | TTTAATTACAGCTGCTCCGGGCTGCTGGCCTCCATGCTGAACGAATaGCCACATGGAGAGTGTTTAAGCATTCCACAATGCCAACGAGCT | + |
|
Preference number: 1 (lower is better) Translates to: FNYSCSGLLASMLNE*PHGECLSIPQCQRA Trigger: AGCTCGTTGGCATTGTGGAATGCTTAAACACTCTCCATGTGGCCATTCGTTCAGCATGGAGGCCAGCAGCCCGGAGCAGCTGTAATTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR-3UTR TCA 90 bp | AGTTCACAGGGACACATTGGTGCAACAGGCCATGTGCAGTCCCGGCTTCCAGTGGCAGCAGTCTTCCTGTaGCTGCTGGGGTGGACCCCA | + |
|
Preference number: 2 (lower is better) Translates to: SSQGHIGATGHVQSRLPVAAVFL*LLGWTP Trigger: TGGGGTCCACCCCAGCAGTCACAGGAAGACTGCTGC...CACTGGAAGCCGGGACTGCACATGGCCTGTTGCACCAATGTGTCCCTGTGAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR-3UTR GCA 90 bp | CTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGTGCTTCAGAGCTCACCAGTCTTCCTGTGACTaGTGGGGTGGACCCCAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: LCSMQSTPGEGRPCFRAHQSSCD*WGGPQA Trigger: TGCCTGGGGTCCACCCCAGCAGTCACAGGAAGACTG...GTGAGCTCTGAAGCACGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR-3UTR TCA 90 bp | GCATGCAGTCCACACCTGGAGAGGGTAGACCGTGCTTCAGAGCTCACTGAGAAGCGCACAGCCTCTCACTaGACCGCAGCAGTCTTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: ACSPHLERVDRASELTEKRTASH*TAAVFL Trigger: CAGGAAGACTGCTGCGGTTCAGTGAGAGGCTGTGCG...CTTCTCAGTGAGCTCTGAAGCACGGTCTACCCTCTCCAGGTGTGGACTGCATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR-3UTR TCA 90 bp | CTAGCCTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGTGCTTCAGAGACCTCAGAGAGGGGATaGCTCTGGCAGAAAACCAGG | + |
|
Preference number: 2 (lower is better) Translates to: LACAACSPHLERVDRASETSERG*LWQKTR Trigger: CCTGGTTTTCTGCCAGAGTCATCCCCTCTCTGAGGT...CTCTGAAGCACGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAGGCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR-3UTR TCA 90 bp | CTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGTGCTTCAGAGCTCACGGTCTTCAGGCCAGGTaGATATGTCTGTGGGGACCT | + |
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Preference number: 2 (lower is better) Translates to: LCSMQSTPGEGRPCFRAHGLQAR*ICLWGP Trigger: AGGTCCCCACAGACATATTCACCTGGCCTGAAGACC...GTGAGCTCTGAAGCACGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR-3UTR CCA 90 bp | AGTTCACAGGGACACATTGGTGCAACAGGCCATGTGCAGTCCCGGCTTCCAGTGGTCTGTGGGGACCTTTaGAGCAGACTCCAGGCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: SSQGHIGATGHVQSRLPVVCGDL*SRLQAG Trigger: TCCTGCCTGGAGTCTGCTCCAAAGGTCCCCACAGAC...CACTGGAAGCCGGGACTGCACATGGCCTGTTGCACCAATGTGTCCCTGTGAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR-3UTR TCA 90 bp | GCATGCAGTCCACACCTGGAGAGGGTAGACCGTGCTTCAGAGCTCACTGAGAAGACCTCAGAGAGGGGATaGCTCTGGCAGAAAACCAGG | + |
|
Preference number: 2 (lower is better) Translates to: ACSPHLERVDRASELTEKTSERG*LWQKTR Trigger: CCTGGTTTTCTGCCAGAGTCATCCCCTCTCTGAGGT...CTTCTCAGTGAGCTCTGAAGCACGGTCTACCCTCTCCAGGTGTGGACTGCATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR-3UTR GCA 90 bp | ACGCCCACAGCACTAGACGGTTTGCAACACTGCTTTCTTGAGCAGCTTAAGCCCCAGTCTTCCTGTGACTaGTGGGGTGGACCCCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: TPTALDGLQHCFLEQLKPQSSCD*WGGPQA Trigger: TGCCTGGGGTCCACCCCAGCAGTCACAGGAAGACTG...GGGCTTAAGCTGCTCAAGAAAGCAGTGTTGCAAACCGTCTAGTGCTGTGGGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR-3UTR TCA 90 bp | ACAGCACTAGACGGTTTGCAACACTGCTTTCTTGAGCAGCTTAAGCCCCTATCCGCAGCAGTCTTCCTGTaGCTGCTGGGGTGGACCCCA | + |
|
Preference number: 2 (lower is better) Translates to: TALDGLQHCFLEQLKPLSAAVFL*LLGWTP Trigger: TGGGGTCCACCCCAGCAGTCACAGGAAGACTGCTGC...GGATAGGGGCTTAAGCTGCTCAAGAAAGCAGTGTTGCAAACCGTCTAGTGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR-3UTR TCA 90 bp | CAAATTAGTTCACAGGGACACATTGGTGCAACAGGCCATGTGCAGTCCCGGCTTCGCACAGCCTCTCACTaGACCGCAGCAGTCTTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: QISSQGHIGATGHVQSRLRTASH*TAAVFL Trigger: CAGGAAGACTGCTGCGGTTCAGTGAGAGGCTGTGCG...AAGCCGGGACTGCACATGGCCTGTTGCACCAATGTGTCCCTGTGAACTAATTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR CAA 90 bp | AGCTCACTGAGAAGGGCTGAGCCCAAATTAGTTCACAGGGACACATaGGTGCAACAGGCCATGTGCAGTCCCGGCTTCCAGTGGTCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: SSLRRAEPKLVHRDT*VQQAMCSPGFQWSS Trigger: TGAAGACCACTGGAAGCCGGGACTGCACATGGCCTGTTGCACCAATGTGTCCCTGTGAACTAATTTGGGCTCAGCCCTTCTCAGTGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR-3UTR TCA 90 bp | CTGAACGAATGGCCACATGGAGAGTGTTTAAGCATTCCACAATGCCAACGAGCTGCAGCAGTCTTCCTGTaGCTGCTGGGGTGGACCCCA | + |
|
Preference number: 2 (lower is better) Translates to: LNEWPHGECLSIPQCQRAAAVFL*LLGWTP Trigger: TGGGGTCCACCCCAGCAGTCACAGGAAGACTGCTGC...AGCTCGTTGGCATTGTGGAATGCTTAAACACTCTCCATGTGGCCATTCGTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR-3UTR GCA 90 bp | CCACATGGAGAGTGTTTAAGCATTCCACAATGCCAACGAGCTCTAGCCTGTGCACAGTCTTCCTGTGACTaGTGGGGTGGACCCCAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: PHGECLSIPQCQRALACAQSSCD*WGGPQA Trigger: TGCCTGGGGTCCACCCCAGCAGTCACAGGAAGACTG...TGCACAGGCTAGAGCTCGTTGGCATTGTGGAATGCTTAAACACTCTCCATGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR-3UTR TCA 90 bp | TTAGTTCACAGGGACACATTGGTGCAACAGGCCATGTGCAGTCCCGGCTTCCAGTCTGATAGGGTGAAGTaGCACTCTAGGGTAGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: LVHRDTLVQQAMCSPGFQSDRVK*HSRVEP Trigger: TGGCTCTACCCTAGAGTGTCACTTCACCCTATCAGA...CTGGAAGCCGGGACTGCACATGGCCTGTTGCACCAATGTGTCCCTGTGAACTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR-3UTR TCA 90 bp | CAACGAGCTCTAGCCTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGTGGAAAGGCCTATAATTaGGTAGGAGTCAGGTCTTTG | + |
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Preference number: 2 (lower is better) Translates to: QRALACAACSPHLERVDRGKAYN*VGVRSL Trigger: CAAAGACCTGACTCCTACTCAATTATAGGCCTTTCC...ACGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAGGCTAGAGCTCGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR-3UTR GCA 90 bp | CAACGAGCTCTAGCCTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGTGACGGTTTGCAACACTaGTTTCTTGAGCAGCTTAAG | + |
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Preference number: 2 (lower is better) Translates to: QRALACAACSPHLERVDRDGLQH*FLEQLK Trigger: CTTAAGCTGCTCAAGAAAGCAGTGTTGCAAACCGTC...ACGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAGGCTAGAGCTCGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR-3UTR GCA 90 bp | CTAGCCTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGTGCTTCAGAGGACGGTTTGCAACACTaGTTTCTTGAGCAGCTTAAG | + |
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Preference number: 2 (lower is better) Translates to: LACAACSPHLERVDRASEDGLQH*FLEQLK Trigger: CTTAAGCTGCTCAAGAAAGCAGTGTTGCAAACCGTC...CTCTGAAGCACGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAGGCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR-3UTR CCA 90 bp | CTGAACGAATGGCCACATGGAGAGTGTTTAAGCATTCCACAATGCCAACGAGCTGTCTGTGGGGACCTTTaGAGCAGACTCCAGGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: LNEWPHGECLSIPQCQRAVCGDL*SRLQAG Trigger: TCCTGCCTGGAGTCTGCTCCAAAGGTCCCCACAGAC...AGCTCGTTGGCATTGTGGAATGCTTAAACACTCTCCATGTGGCCATTCGTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR-3UTR TCA 90 bp | CAAATTAGTTCACAGGGACACATTGGTGCAACAGGCCATGTGCAGTCCCGGCTTTCTGATAGGGTGAAGTaGCACTCTAGGGTAGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: QISSQGHIGATGHVQSRLSDRVK*HSRVEP Trigger: TGGCTCTACCCTAGAGTGTCACTTCACCCTATCAGA...AAGCCGGGACTGCACATGGCCTGTTGCACCAATGTGTCCCTGTGAACTAATTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR-3UTR TCA 90 bp | TTAGTTCACAGGGACACATTGGTGCAACAGGCCATGTGCAGTCCCGGCTTCCAGGGAAAGGCCTATAATTaGGTAGGAGTCAGGTCTTTG | + |
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Preference number: 2 (lower is better) Translates to: LVHRDTLVQQAMCSPGFQGKAYN*VGVRSL Trigger: CAAAGACCTGACTCCTACTCAATTATAGGCCTTTCC...CTGGAAGCCGGGACTGCACATGGCCTGTTGCACCAATGTGTCCCTGTGAACTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR-3UTR TCA 90 bp | CTGAACGAATGGCCACATGGAGAGTGTTTAAGCATTCCACAATGCCAACGAGCTGGTCTTCAGGCCAGGTaGATATGTCTGTGGGGACCT | + |
|
Preference number: 2 (lower is better) Translates to: LNEWPHGECLSIPQCQRAGLQAR*ICLWGP Trigger: AGGTCCCCACAGACATATTCACCTGGCCTGAAGACC...AGCTCGTTGGCATTGTGGAATGCTTAAACACTCTCCATGTGGCCATTCGTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR-3UTR CCA 90 bp | CCACATGGAGAGTGTTTAAGCATTCCACAATGCCAACGAGCTCTAGCCTGTGCATTCACAGGGACACATTaGTGCAACAGGCCATGTGCA | + |
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Preference number: 2 (lower is better) Translates to: PHGECLSIPQCQRALACAFTGTH*CNRPCA Trigger: TGCACATGGCCTGTTGCACCAATGTGTCCCTGTGAA...TGCACAGGCTAGAGCTCGTTGGCATTGTGGAATGCTTAAACACTCTCCATGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR-3UTR TCA 90 bp | CCACATGGAGAGTGTTTAAGCATTCCACAATGCCAACGAGCTCTAGCCTGTGCAGGAAAGGCCTATAATTaGGTAGGAGTCAGGTCTTTG | + |
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Preference number: 2 (lower is better) Translates to: PHGECLSIPQCQRALACAGKAYN*VGVRSL Trigger: CAAAGACCTGACTCCTACTCAATTATAGGCCTTTCC...TGCACAGGCTAGAGCTCGTTGGCATTGTGGAATGCTTAAACACTCTCCATGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR GCA 72 bp | CAGCCTCTCACTGAACCGCAGCAGTCTTCCTGTGACTaGTGGGGTGGACCCCAGGCAAAGGACCAGGTCTCC | + |
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Preference number: 3 (lower is better) Translates to: QPLTEPQQSSCD*WGGPQAKDQVS Trigger: GGAGACCTGGTCCTTTGCCTGGGGTCCACCCCAGCAGTCACAGGAAGACTGCTGCGGTTCAGTGAGAGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR CCA 72 bp | TTGGTGCAACAGGCCATGTGCAGTCCCGGCTTCCAGTaGTCTTCAGGCCAGGTGAATATGTCTGTGGGGACC | + |
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Preference number: 3 (lower is better) Translates to: LVQQAMCSPGFQ*SSGQVNMSVGT Trigger: GGTCCCCACAGACATATTCACCTGGCCTGAAGACCACTGGAAGCCGGGACTGCACATGGCCTGTTGCACCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR GCA 72 bp | TTAGTTCACAGGGACACATTGGTGCAACAGGCCATGTaGAGTCCCGGCTTCCAGTGGTCTTCAGGCCAGGTG | + |
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Preference number: 3 (lower is better) Translates to: LVHRDTLVQQAM*SPGFQWSSGQV Trigger: CACCTGGCCTGAAGACCACTGGAAGCCGGGACTGCACATGGCCTGTTGCACCAATGTGTCCCTGTGAACTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR-3UTR CAA 90 bp | CCAACGAGCTCTAGCCTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGTGCAACACTGCTTTCTaGAGCAGCTTAAGCCCCTAT | + |
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Preference number: 3 (lower is better) Translates to: PTSSSLCSMQSTPGEGRPCNTAF*SSLSPY Trigger: ATAGGGGCTTAAGCTGCTCAAGAAAGCAGTGTTGCA...CGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAGGCTAGAGCTCGTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR GCA 72 bp | ATTCCACAATGCCAACGAGCTCTAGCCTGTGCAGCATaGAGTCCACACCTGGAGAGGGTAGACCGTGCTTCA | + |
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Preference number: 3 (lower is better) Translates to: IPQCQRALACAA*SPHLERVDRAS Trigger: TGAAGCACGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAGGCTAGAGCTCGTTGGCATTGTGGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR-3UTR CAA 90 bp | CTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGTGCTTCAGAGCTCACTGCAACACTGCTTTCTaGAGCAGCTTAAGCCCCTAT | + |
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Preference number: 3 (lower is better) Translates to: LCSMQSTPGEGRPCFRAHCNTAF*SSLSPY Trigger: ATAGGGGCTTAAGCTGCTCAAGAAAGCAGTGTTGCA...GTGAGCTCTGAAGCACGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR GCA 72 bp | TTTAAGCATTCCACAATGCCAACGAGCTCTAGCCTGTaGAGCATGCAGTCCACACCTGGAGAGGGTAGACCG | + |
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Preference number: 3 (lower is better) Translates to: FKHSTMPTSSSL*SMQSTPGEGRP Trigger: CGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAGGCTAGAGCTCGTTGGCATTGTGGAATGCTTAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR-3UTR CAA 90 bp | AGTTCACAGGGACACATTGGTGCAACAGGCCATGTGCAGTCCCGGCTTCCAGTGTGCAACACTGCTTTCTaGAGCAGCTTAAGCCCCTAT | + |
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Preference number: 3 (lower is better) Translates to: SSQGHIGATGHVQSRLPVCNTAF*SSLSPY Trigger: ATAGGGGCTTAAGCTGCTCAAGAAAGCAGTGTTGCA...CACTGGAAGCCGGGACTGCACATGGCCTGTTGCACCAATGTGTCCCTGTGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR TCA 72 bp | AGGGTAGACCGTGCTTCAGAGCTCACTGAGAAGGGCTaGGCCCAAATTAGTTCACAGGGACACATTGGTGCA | + |
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Preference number: 3 (lower is better) Translates to: RVDRASELTEKG*AQISSQGHIGA Trigger: TGCACCAATGTGTCCCTGTGAACTAATTTGGGCTCAGCCCTTCTCAGTGAGCTCTGAAGCACGGTCTACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR-3UTR CAA 90 bp | CAAATTAGTTCACAGGGACACATTGGTGCAACAGGCCATGTGCAGTCCCGGCTTGTAGGAGTCAGGTCTTaGGGAGGAAAGCCAAGCTCT | + |
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Preference number: 3 (lower is better) Translates to: QISSQGHIGATGHVQSRLVGVRS*GGKPSS Trigger: AGAGCTTGGCTTTCCTCCCAAAGACCTGACTCCTAC...AAGCCGGGACTGCACATGGCCTGTTGCACCAATGTGTCCCTGTGAACTAATTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR-3UTR CAA 90 bp | CCACATGGAGAGTGTTTAAGCATTCCACAATGCCAACGAGCTCTAGCCTGTGCAGTTCACAGGGACACATaGGTGCAACAGGCCATGTGC | + |
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Preference number: 3 (lower is better) Translates to: PHGECLSIPQCQRALACAVHRDT*VQQAMC Trigger: GCACATGGCCTGTTGCACCAATGTGTCCCTGTGAAC...TGCACAGGCTAGAGCTCGTTGGCATTGTGGAATGCTTAAACACTCTCCATGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR TCA 72 bp | CTTTGGAGCAGACTCCAGGCAGGAAAGGCCTATAATTaGGTAGGAGTCAGGTCTTTGGGAGGAAAGCCAAGC | + |
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Preference number: 3 (lower is better) Translates to: LWSRLQAGKAYN*VGVRSLGGKPS Trigger: GCTTGGCTTTCCTCCCAAAGACCTGACTCCTACTCAATTATAGGCCTTTCCTGCCTGGAGTCTGCTCCAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| 3UTR GCA 72 bp | GAATGGCCACATGGAGAGTGTTTAAGCATTCCACAATaGCAACGAGCTCTAGCCTGTGCAGCATGCAGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: EWPHGECLSIPQ*QRALACAACSP Trigger: TGGACTGCATGCTGCACAGGCTAGAGCTCGTTGGCATTGTGGAATGCTTAAACACTCTCCATGTGGCCATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| 3UTR TCA 72 bp | TCTTTGGGAGGAAAGCCAAGCTCTGATAGGGTGAAGTaGCACTCTAGGGTAGAGCCATATGAGACAGGGATG | + |
|
Preference number: 3 (lower is better) Translates to: SLGGKPSSDRVK*HSRVEPYETGM Trigger: CATCCCTGTCTCATATGGCTCTACCCTAGAGTGTCACTTCACCCTATCAGAGCTTGGCTTTCCTCCCAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | CCAACGAGCTCTAGCCTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGGCTCGGGCCCGGGGCTaGGGCTCTGTACAGAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PTSSSLCSMQSTPGEGRPARARG*GSVQRP Trigger: GGGCCTCTGTACAGAGCCCCAGCCCCGGGCCCGAGC...CGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAGGCTAGAGCTCGTTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | CCAACGAGCTCTAGCCTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGCCCAGATGCCCAGGATaGAGCCACGGGCACGGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: PTSSSLCSMQSTPGEGRPPRCPG*SHGHGE Trigger: CTCGCCGTGCCCGTGGCTCCATCCTGGGCATCTGGG...CGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAGGCTAGAGCTCGTTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR TCA 90 bp | CTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGTGCTTCAGAGCTCACCAGCCTGGGGCACCATaGCAGCCAGCGACACAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LCSMQSTPGEGRPCFRAHQPGAP*QPATQP Trigger: GGGCTGTGTCGCTGGCTGTCATGGTGCCCCAGGCTG...GTGAGCTCTGAAGCACGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | CTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGTGCTTCAGAGCTCACCCCAGATGCCCAGGATaGAGCCACGGGCACGGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LCSMQSTPGEGRPCFRAHPRCPG*SHGHGE Trigger: CTCGCCGTGCCCGTGGCTCCATCCTGGGCATCTGGG...GTGAGCTCTGAAGCACGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | CCAACGAGCTCTAGCCTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGCGGCTTCCCGGTCGCTaGCTTGGCGGAACATCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: PTSSSLCSMQSTPGEGRPRLPGR*LGGTSR Trigger: TCGGGATGTTCCGCCAAGCCAGCGACCGGGAAGCCG...CGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAGGCTAGAGCTCGTTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | CCAACGAGCTCTAGCCTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGAGAGCCGGGTGCGATTaGCTAGCTCAGGCAGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: PTSSSLCSMQSTPGEGRPRAGCD*LAQAAR Trigger: GCGTGCTGCCTGAGCTAGCCAATCGCACCCGGCTCT...CGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAGGCTAGAGCTCGTTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | CTAGCCTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGTGCTTCAGAGCGGCTTCCCGGTCGCTaGCTTGGCGGAACATCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LACAACSPHLERVDRASERLPGR*LGGTSR Trigger: TCGGGATGTTCCGCCAAGCCAGCGACCGGGAAGCCG...CTCTGAAGCACGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAGGCTAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR TCA 90 bp | CACAACCTCAGAGAGGGGATGACTCTGGCAGAAAACCAGGACTGGCATCGCACACAGCCTGGGGCACCATaGCAGCCAGCGACACAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: HNLREGMTLAENQDWHRTQPGAP*QPATQP Trigger: GGGCTGTGTCGCTGGCTGTCATGGTGCCCCAGGCTG...TGTGCGATGCCAGTCCTGGTTTTCTGCCAGAGTCATCCCCTCTCTGAGGTTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR TCA 90 bp | CTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGTGCTTCAGAGCTCACCAGAGGCCCTGGTGCTaGGCCTCCAGTTGTTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LCSMQSTPGEGRPCFRAHQRPWC*ASSCSE Trigger: CTCGGAACAACTGGAGGCTCAGCACCAGGGCCTCTG...GTGAGCTCTGAAGCACGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR TCA 90 bp | CAACGAGCTCTAGCCTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGTCAGAGGCCCTGGTGCTaGGCCTCCAGTTGTTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: QRALACAACSPHLERVDRQRPWC*ASSCSE Trigger: CTCGGAACAACTGGAGGCTCAGCACCAGGGCCTCTG...ACGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAGGCTAGAGCTCGTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | CAACGAGCTCTAGCCTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGTAGAGCCGGGTGCGATTaGCTAGCTCAGGCAGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: QRALACAACSPHLERVDRRAGCD*LAQAAR Trigger: GCGTGCTGCCTGAGCTAGCCAATCGCACCCGGCTCT...ACGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAGGCTAGAGCTCGTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | GCATGCAGTCCACACCTGGAGAGGGTAGACCGTGCTTCAGAGCTCACTGAGAAGGTGGTACCAGGGATCTaGCGGCCCCAGAGCTTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ACSPHLERVDRASELTEKVVPGI*RPQSLR Trigger: CCGCAAGCTCTGGGGCCGCCAGATCCCTGGTACCAC...CTTCTCAGTGAGCTCTGAAGCACGGTCTACCCTCTCCAGGTGTGGACTGCATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | CAAATTAGTTCACAGGGACACATTGGTGCAACAGGCCATGTGCAGTCCCGGCTTGCTCGGGCCCGGGGCTaGGGCTCTGTACAGAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QISSQGHIGATGHVQSRLARARG*GSVQRP Trigger: GGGCCTCTGTACAGAGCCCCAGCCCCGGGCCCGAGC...AAGCCGGGACTGCACATGGCCTGTTGCACCAATGTGTCCCTGTGAACTAATTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | GCATGCAGTCCACACCTGGAGAGGGTAGACCGTGCTTCAGAGCTCACTGAGAAGCGGCTTCCCGGTCGCTaGCTTGGCGGAACATCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: ACSPHLERVDRASELTEKRLPGR*LGGTSR Trigger: TCGGGATGTTCCGCCAAGCCAGCGACCGGGAAGCCG...CTTCTCAGTGAGCTCTGAAGCACGGTCTACCCTCTCCAGGTGTGGACTGCATGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR TCA 90 bp | GCATGCAGTCCACACCTGGAGAGGGTAGACCGTGCTTCAGAGCTCACTGAGAAGCAGAGGCCCTGGTGCTaGGCCTCCAGTTGTTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: ACSPHLERVDRASELTEKQRPWC*ASSCSE Trigger: CTCGGAACAACTGGAGGCTCAGCACCAGGGCCTCTG...CTTCTCAGTGAGCTCTGAAGCACGGTCTACCCTCTCCAGGTGTGGACTGCATGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | TTAGTTCACAGGGACACATTGGTGCAACAGGCCATGTGCAGTCCCGGCTTCCAGGTGGTACCAGGGATCTaGCGGCCCCAGAGCTTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LVHRDTLVQQAMCSPGFQVVPGI*RPQSLR Trigger: CCGCAAGCTCTGGGGCCGCCAGATCCCTGGTACCAC...CTGGAAGCCGGGACTGCACATGGCCTGTTGCACCAATGTGTCCCTGTGAACTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | CAACGAGCTCTAGCCTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGTGCACCAAGGCTGATGTaGTACCAGGGATCTGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: QRALACAACSPHLERVDRAPRLM*YQGSGG Trigger: GCCGCCAGATCCCTGGTACCACATCAGCCTTGGTGC...ACGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAGGCTAGAGCTCGTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | ACAGCACTAGACGGTTTGCAACACTGCTTTCTTGAGCAGCTTAAGCCCCTATCCGCTCGGGCCCGGGGCTaGGGCTCTGTACAGAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TALDGLQHCFLEQLKPLSARARG*GSVQRP Trigger: GGGCCTCTGTACAGAGCCCCAGCCCCGGGCCCGAGC...GGATAGGGGCTTAAGCTGCTCAAGAAAGCAGTGTTGCAAACCGTCTAGTGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR TCA 90 bp | AGTTCACAGGGACACATTGGTGCAACAGGCCATGTGCAGTCCCGGCTTCCAGTGAGTCAGCACTGCCACTaGCACCGACACAGCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSQGHIGATGHVQSRLPVSQHCH*HRHSLE Trigger: CTCCAGGCTGTGTCGGTGTCAGTGGCAGTGCTGACT...CACTGGAAGCCGGGACTGCACATGGCCTGTTGCACCAATGTGTCCCTGTGAACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR TCA 90 bp | CTAGCCTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGTGCTTCAGAGGGCGAGCTGTGCTCTTaGACAACAGTGGGTGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LACAACSPHLERVDRASEGELCS*TTVGGR Trigger: TCTGCCACCCACTGTTGTTCAAGAGCACAGCTCGCC...CTCTGAAGCACGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAGGCTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR TCA 90 bp | CAAATTAGTTCACAGGGACACATTGGTGCAACAGGCCATGTGCAGTCCCGGCTTCAGCCTGGGGCACCATaGCAGCCAGCGACACAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QISSQGHIGATGHVQSRLQPGAP*QPATQP Trigger: GGGCTGTGTCGCTGGCTGTCATGGTGCCCCAGGCTG...AAGCCGGGACTGCACATGGCCTGTTGCACCAATGTGTCCCTGTGAACTAATTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR GCA 90 bp | CTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGTGCTTCAGAGCTCACGGCGGCCCCAGAGCTTaGGGAAGATCTGGAAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: LCSMQSTPGEGRPCFRAHGGPRA*GRSGNR Trigger: CCTATTTCCAGATCTTCCGCAAGCTCTGGGGCCGCC...GTGAGCTCTGAAGCACGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR GCA 90 bp | CTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGTGCTTCAGAGCTCACCTCCGAGCTCGCATCTaGTTCACCTCAGCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LCSMQSTPGEGRPCFRAHLRARI*FTSARK Trigger: CTTCCTGGCTGAGGTGAAGCAGATGCGAGCTCGGAG...GTGAGCTCTGAAGCACGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR GCA 90 bp | CAACGAGCTCTAGCCTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGTCTCCGAGCTCGCATCTaGTTCACCTCAGCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QRALACAACSPHLERVDRLRARI*FTSARK Trigger: CTTCCTGGCTGAGGTGAAGCAGATGCGAGCTCGGAG...ACGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAGGCTAGAGCTCGTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR GCA 90 bp | CCAACGAGCTCTAGCCTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGACGGAGCAGCGGCTCTaGAAGGACAAGGACTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PTSSSLCSMQSTPGEGRPTEQRL*KDKDLC Trigger: ACACAAGTCCTTGTCCTTGCAGAGCCGCTGCTCCGT...CGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAGGCTAGAGCTCGTTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | AGTTCACAGGGACACATTGGTGCAACAGGCCATGTGCAGTCCCGGCTTCCAGTGGCACCAAGGCTGATGTaGTACCAGGGATCTGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSQGHIGATGHVQSRLPVAPRLM*YQGSGG Trigger: GCCGCCAGATCCCTGGTACCACATCAGCCTTGGTGC...CACTGGAAGCCGGGACTGCACATGGCCTGTTGCACCAATGTGTCCCTGTGAACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | CTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGTGCTTCAGAGCTCACACAAGGACTTGTGTCTaGCAGAGGAGCCGGGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: LCSMQSTPGEGRPCFRAHTRTCV*QRSRDP Trigger: TGGGTCCCGGCTCCTCTGCCAGACACAAGTCCTTGT...GTGAGCTCTGAAGCACGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR TCA 90 bp | CTAGCCTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGTGCTTCAGAGCCTGGAGATAGGGAATaGCCTTGCACAAAGCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LACAACSPHLERVDRASEPGDRE*PCTKPG Trigger: GCCAGGCTTTGTGCAAGGTCATTCCCTATCTCCAGG...CTCTGAAGCACGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAGGCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR TCA 90 bp | TTAGTTCACAGGGACACATTGGTGCAACAGGCCATGTGCAGTCCCGGCTTCCAGAGTCAGCACTGCCACTaGCACCGACACAGCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LVHRDTLVQQAMCSPGFQSQHCH*HRHSLE Trigger: CTCCAGGCTGTGTCGGTGTCAGTGGCAGTGCTGACT...CTGGAAGCCGGGACTGCACATGGCCTGTTGCACCAATGTGTCCCTGTGAACTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR GCA 90 bp | CCAACGAGCTCTAGCCTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGCACAGCCACGTAGGCTaGAATGAGAACCCACTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: PTSSSLCSMQSTPGEGRPHSHVG*NENPLV Trigger: TACGAGTGGGTTCTCATTGCAGCCTACGTGGCTGTG...CGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAGGCTAGAGCTCGTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR GCA 90 bp | GCATGCAGTCCACACCTGGAGAGGGTAGACCGTGCTTCAGAGCTCACTGAGAAGCAGAGAAGAGCCGGGTaGGATTGGCTAGCTCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ACSPHLERVDRASELTEKQRRAG*DWLAQA Trigger: TGCCTGAGCTAGCCAATCGCACCCGGCTCTTCTCTG...CTTCTCAGTGAGCTCTGAAGCACGGTCTACCCTCTCCAGGTGTGGACTGCATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR GCA 90 bp | GCATGCAGTCCACACCTGGAGAGGGTAGACCGTGCTTCAGAGCTCACTGAGAAGGGCGGCCCCAGAGCTTaGGGAAGATCTGGAAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: ACSPHLERVDRASELTEKGGPRA*GRSGNR Trigger: CCTATTTCCAGATCTTCCGCAAGCTCTGGGGCCGCC...CTTCTCAGTGAGCTCTGAAGCACGGTCTACCCTCTCCAGGTGTGGACTGCATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR GCA 90 bp | CTAGCCTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGTGCTTCAGAGACGGAGCAGCGGCTCTaGAAGGACAAGGACTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LACAACSPHLERVDRASETEQRL*KDKDLC Trigger: ACACAAGTCCTTGTCCTTGCAGAGCCGCTGCTCCGT...CTCTGAAGCACGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAGGCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR GCA 90 bp | CAACGAGCTCTAGCCTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGTACGGAGCAGCGGCTCTaGAAGGACAAGGACTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QRALACAACSPHLERVDRTEQRL*KDKDLC Trigger: ACACAAGTCCTTGTCCTTGCAGAGCCGCTGCTCCGT...ACGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAGGCTAGAGCTCGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | CCACATGGAGAGTGTTTAAGCATTCCACAATGCCAACGAGCTCTAGCCTGTGCACCCAGATGCCCAGGATaGAGCCACGGGCACGGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: PHGECLSIPQCQRALACAPRCPG*SHGHGE Trigger: CTCGCCGTGCCCGTGGCTCCATCCTGGGCATCTGGG...TGCACAGGCTAGAGCTCGTTGGCATTGTGGAATGCTTAAACACTCTCCATGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | CACAACCTCAGAGAGGGGATGACTCTGGCAGAAAACCAGGACTGGCATCGCACATCCCGGTCGCTGGCTTaGCGGAACATCCCGAACACT | + |
|
Preference number: 4 (lower is better) Translates to: HNLREGMTLAENQDWHRTSRSLA*RNIPNT Trigger: AGTGTTCGGGATGTTCCGCCAAGCCAGCGACCGGGA...TGTGCGATGCCAGTCCTGGTTTTCTGCCAGAGTCATCCCCTCTCTGAGGTTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR TCA 90 bp | AGTTCACAGGGACACATTGGTGCAACAGGCCATGTGCAGTCCCGGCTTCCAGTGCCTGGAGATAGGGAATaGCCTTGCACAAAGCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSQGHIGATGHVQSRLPVPGDRE*PCTKPG Trigger: GCCAGGCTTTGTGCAAGGTCATTCCCTATCTCCAGG...CACTGGAAGCCGGGACTGCACATGGCCTGTTGCACCAATGTGTCCCTGTGAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR TCA 90 bp | CACAACCTCAGAGAGGGGATGACTCTGGCAGAAAACCAGGACTGGCATCGCACAGGCGAGCTGTGCTCTTaGACAACAGTGGGTGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HNLREGMTLAENQDWHRTGELCS*TTVGGR Trigger: TCTGCCACCCACTGTTGTTCAAGAGCACAGCTCGCC...TGTGCGATGCCAGTCCTGGTTTTCTGCCAGAGTCATCCCCTCTCTGAGGTTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR TCA 90 bp | TTAGTTCACAGGGACACATTGGTGCAACAGGCCATGTGCAGTCCCGGCTTCCAGGGCGAGCTGTGCTCTTaGACAACAGTGGGTGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LVHRDTLVQQAMCSPGFQGELCS*TTVGGR Trigger: TCTGCCACCCACTGTTGTTCAAGAGCACAGCTCGCC...CTGGAAGCCGGGACTGCACATGGCCTGTTGCACCAATGTGTCCCTGTGAACTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR TCA 90 bp | CACAACCTCAGAGAGGGGATGACTCTGGCAGAAAACCAGGACTGGCATCGCACAGTTCCGCACCAAGGCTaGTGTGGTACCAGGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: HNLREGMTLAENQDWHRTVPHQG*CGTRDL Trigger: CAGATCCCTGGTACCACATCAGCCTTGGTGCGGAAC...TGTGCGATGCCAGTCCTGGTTTTCTGCCAGAGTCATCCCCTCTCTGAGGTTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR GCA 90 bp | CAACGAGCTCTAGCCTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGTGGGGTAGAGTTCATCTaGCCAGTGCTCATCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QRALACAACSPHLERVDRGVEFI*PVLITD Trigger: GTCTGTGATGAGCACTGGGCAGATGAACTCTACCCC...ACGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAGGCTAGAGCTCGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR GCA 90 bp | CAACGAGCTCTAGCCTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGTAAGGCAGCCTTGAACTaGTCCCGGAATTTGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: QRALACAACSPHLERVDRKAALN*SRNLPL Trigger: CAGTGGCAAATTCCGGGAGCAGTTCAAGGCTGCCTT...ACGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAGGCTAGAGCTCGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR GCA 90 bp | CTAGCCTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGTGCTTCAGAGAAGGCAGCCTTGAACTaGTCCCGGAATTTGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LACAACSPHLERVDRASEKAALN*SRNLPL Trigger: CAGTGGCAAATTCCGGGAGCAGTTCAAGGCTGCCTT...CTCTGAAGCACGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAGGCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | CCACATGGAGAGTGTTTAAGCATTCCACAATGCCAACGAGCTCTAGCCTGTGCAGTGGTACCAGGGATCTaGCGGCCCCAGAGCTTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PHGECLSIPQCQRALACAVVPGI*RPQSLR Trigger: CCGCAAGCTCTGGGGCCGCCAGATCCCTGGTACCAC...TGCACAGGCTAGAGCTCGTTGGCATTGTGGAATGCTTAAACACTCTCCATGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | CACAACCTCAGAGAGGGGATGACTCTGGCAGAAAACCAGGACTGGCATCGCACACATGCTCAGAGACCTTaGAGACGGAGCAGCGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HNLREGMTLAENQDWHRTHAQRP*RRSSGS Trigger: AGAGCCGCTGCTCCGTCTCCAAGGTCTCTGAGCATG...TGTGCGATGCCAGTCCTGGTTTTCTGCCAGAGTCATCCCCTCTCTGAGGTTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR TCA 90 bp | AGAAAACCAGGACTGGCATCGCACAGCCTCTCACTGAACCGCAGCAGTCTTCCTAGGAGAAGGCAGCCTTaGACTGCTCCCGGAATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RKPGLASHSLSLNRSSLPRRRQP*TAPGIC Trigger: GCAAATTCCGGGAGCAGTTCAAGGCTGCCTTCTCCT...AGGAAGACTGCTGCGGTTCAGTGAGAGGCTGTGCGATGCCAGTCCTGGTTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR GCA 90 bp | GCATGCAGTCCACACCTGGAGAGGGTAGACCGTGCTTCAGAGCTCACTGAGAAGCACAGCCACGTAGGCTaGAATGAGAACCCACTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: ACSPHLERVDRASELTEKHSHVG*NENPLV Trigger: TACGAGTGGGTTCTCATTGCAGCCTACGTGGCTGTG...CTTCTCAGTGAGCTCTGAAGCACGGTCTACCCTCTCCAGGTGTGGACTGCATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR GCA 90 bp | CTAGCCTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGTGCTTCAGAGAGTCACCAGCACATCTaGCAGGGACAGGTTGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: LACAACSPHLERVDRASESHQHI*QGQVDN Trigger: ATTGTCAACCTGTCCCTGGCAGATGTGCTGGTGACT...CTCTGAAGCACGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAGGCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR GCA 90 bp | ACGCCCACAGCACTAGACGGTTTGCAACACTGCTTTCTTGAGCAGCTTAAGCCCCAGAGAAGAGCCGGGTaGGATTGGCTAGCTCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TPTALDGLQHCFLEQLKPQRRAG*DWLAQA Trigger: TGCCTGAGCTAGCCAATCGCACCCGGCTCTTCTCTG...GGGCTTAAGCTGCTCAAGAAAGCAGTGTTGCAAACCGTCTAGTGCTGTGGGCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR GCA 90 bp | ACGCCCACAGCACTAGACGGTTTGCAACACTGCTTTCTTGAGCAGCTTAAGCCCGGCGGCCCCAGAGCTTaGGGAAGATCTGGAAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: TPTALDGLQHCFLEQLKPGGPRA*GRSGNR Trigger: CCTATTTCCAGATCTTCCGCAAGCTCTGGGGCCGCC...GGGCTTAAGCTGCTCAAGAAAGCAGTGTTGCAAACCGTCTAGTGCTGTGGGCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | ACGCCCACAGCACTAGACGGTTTGCAACACTGCTTTCTTGAGCAGCTTAAGCCCGTGACTGTCCTCATGTaGTGGTTCCGCCACACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TPTALDGLQHCFLEQLKPVTVLM*WFRHTA Trigger: GGCTGTGTGGCGGAACCACCACATGAGGACAGTCAC...GGGCTTAAGCTGCTCAAGAAAGCAGTGTTGCAAACCGTCTAGTGCTGTGGGCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | AGTTCACAGGGACACATTGGTGCAACAGGCCATGTGCAGTCCCGGCTTCCAGTGTTGAACAACAGTGGGTaGCAGATGGCATACCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SSQGHIGATGHVQSRLPVLNNSG*QMAYQR Trigger: CCGCTGGTATGCCATCTGCCACCCACTGTTGTTCAA...CACTGGAAGCCGGGACTGCACATGGCCTGTTGCACCAATGTGTCCCTGTGAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | CTAGCCTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGTGCTTCAGAGGCTCTTGAACAACAGTaGGTGGCAGATGGCATACCA | + |
|
Preference number: 4 (lower is better) Translates to: LACAACSPHLERVDRASEALEQQ*VADGIP Trigger: TGGTATGCCATCTGCCACCCACTGTTGTTCAAGAGC...CTCTGAAGCACGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAGGCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | CAAATTAGTTCACAGGGACACATTGGTGCAACAGGCCATGTGCAGTCCCGGCTTTCCATGACAGCAGCCTaGGGCACCATGACAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QISSQGHIGATGHVQSRLSMTAA*GTMTAS Trigger: GCTGGCTGTCATGGTGCCCCAGGCTGCTGTCATGGA...AAGCCGGGACTGCACATGGCCTGTTGCACCAATGTGTCCCTGTGAACTAATTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | CCACATGGAGAGTGTTTAAGCATTCCACAATGCCAACGAGCTCTAGCCTGTGCAAGAGCCGGGTGCGATTaGCTAGCTCAGGCAGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: PHGECLSIPQCQRALACARAGCD*LAQAAR Trigger: GCGTGCTGCCTGAGCTAGCCAATCGCACCCGGCTCT...TGCACAGGCTAGAGCTCGTTGGCATTGTGGAATGCTTAAACACTCTCCATGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | ACGCCCACAGCACTAGACGGTTTGCAACACTGCTTTCTTGAGCAGCTTAAGCCCACAAGGACTTGTGTCTaGCAGAGGAGCCGGGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: TPTALDGLQHCFLEQLKPTRTCV*QRSRDP Trigger: TGGGTCCCGGCTCCTCTGCCAGACACAAGTCCTTGT...GGGCTTAAGCTGCTCAAGAAAGCAGTGTTGCAAACCGTCTAGTGCTGTGGGCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| 3UTR CAA 72 bp | AGAAGGGCTGAGCCCAAATTAGTTCACAGGGACACATaGGTGCAACAGGCCATGTGCAGTCCCGGCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RRAEPKLVHRDT*VQQAMCSPGFQ Trigger: CTGGAAGCCGGGACTGCACATGGCCTGTTGCACCAATGTGTCCCTGTGAACTAATTTGGGCTCAGCCCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR GCA 90 bp | TTAGTTCACAGGGACACATTGGTGCAACAGGCCATGTGCAGTCCCGGCTTCCAGGGGGTAGAGTTCATCTaGCCAGTGCTCATCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LVHRDTLVQQAMCSPGFQGVEFI*PVLITD Trigger: GTCTGTGATGAGCACTGGGCAGATGAACTCTACCCC...CTGGAAGCCGGGACTGCACATGGCCTGTTGCACCAATGTGTCCCTGTGAACTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR GCA 90 bp | CACAACCTCAGAGAGGGGATGACTCTGGCAGAAAACCAGGACTGGCATCGCACAGGGGTAGAGTTCATCTaGCCAGTGCTCATCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HNLREGMTLAENQDWHRTGVEFI*PVLITD Trigger: GTCTGTGATGAGCACTGGGCAGATGAACTCTACCCC...TGTGCGATGCCAGTCCTGGTTTTCTGCCAGAGTCATCCCCTCTCTGAGGTTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR GCA 90 bp | CAAATTAGTTCACAGGGACACATTGGTGCAACAGGCCATGTGCAGTCCCGGCTTCTCCGAGCTCGCATCTaGTTCACCTCAGCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QISSQGHIGATGHVQSRLLRARI*FTSARK Trigger: CTTCCTGGCTGAGGTGAAGCAGATGCGAGCTCGGAG...AAGCCGGGACTGCACATGGCCTGTTGCACCAATGTGTCCCTGTGAACTAATTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | CACAACCTCAGAGAGGGGATGACTCTGGCAGAAAACCAGGACTGGCATCGCACACTCGTCCTCATAGTCTaGAGGCAGATGGAAGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HNLREGMTLAENQDWHRTLVLIV*RQMEGF Trigger: GAACCCTTCCATCTGCCTCCAGACTATGAGGACGAG...TGTGCGATGCCAGTCCTGGTTTTCTGCCAGAGTCATCCCCTCTCTGAGGTTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | CAAATTAGTTCACAGGGACACATTGGTGCAACAGGCCATGTGCAGTCCCGGCTTGTGACTGTCCTCATGTaGTGGTTCCGCCACACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QISSQGHIGATGHVQSRLVTVLM*WFRHTA Trigger: GGCTGTGTGGCGGAACCACCACATGAGGACAGTCAC...AAGCCGGGACTGCACATGGCCTGTTGCACCAATGTGTCCCTGTGAACTAATTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | TTAGTTCACAGGGACACATTGGTGCAACAGGCCATGTGCAGTCCCGGCTTCCAGTTGAACAACAGTGGGTaGCAGATGGCATACCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LVHRDTLVQQAMCSPGFQLNNSG*QMAYQR Trigger: CCGCTGGTATGCCATCTGCCACCCACTGTTGTTCAA...CTGGAAGCCGGGACTGCACATGGCCTGTTGCACCAATGTGTCCCTGTGAACTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| CDS-3UTR CCA 90 bp | CCACATGGAGAGTGTTTAAGCATTCCACAATGCCAACGAGCTCTAGCCTGTGCATCCATGACAGCAGCCTaGGGCACCATGACAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PHGECLSIPQCQRALACASMTAA*GTMTAS Trigger: GCTGGCTGTCATGGTGCCCCAGGCTGCTGTCATGGA...TGCACAGGCTAGAGCTCGTTGGCATTGTGGAATGCTTAAACACTCTCCATGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | ACAGCACTAGACGGTTTGCAACACTGCTTTCTTGAGCAGCTTAAGCCCCTATCCTCCCGGTCGCTGGCTTaGCGGAACATCCCGAACACT | + |
|
Preference number: 4 (lower is better) Translates to: TALDGLQHCFLEQLKPLSSRSLA*RNIPNT Trigger: AGTGTTCGGGATGTTCCGCCAAGCCAGCGACCGGGA...GGATAGGGGCTTAAGCTGCTCAAGAAAGCAGTGTTGCAAACCGTCTAGTGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | CCACATGGAGAGTGTTTAAGCATTCCACAATGCCAACGAGCTCTAGCCTGTGCATCCCGGTCGCTGGCTTaGCGGAACATCCCGAACACT | + |
|
Preference number: 4 (lower is better) Translates to: PHGECLSIPQCQRALACASRSLA*RNIPNT Trigger: AGTGTTCGGGATGTTCCGCCAAGCCAGCGACCGGGA...TGCACAGGCTAGAGCTCGTTGGCATTGTGGAATGCTTAAACACTCTCCATGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR TCA 90 bp | CCACATGGAGAGTGTTTAAGCATTCCACAATGCCAACGAGCTCTAGCCTGTGCAGTTCCGCACCAAGGCTaGTGTGGTACCAGGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: PHGECLSIPQCQRALACAVPHQG*CGTRDL Trigger: CAGATCCCTGGTACCACATCAGCCTTGGTGCGGAAC...TGCACAGGCTAGAGCTCGTTGGCATTGTGGAATGCTTAAACACTCTCCATGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR TCA 90 bp | CAAATTAGTTCACAGGGACACATTGGTGCAACAGGCCATGTGCAGTCCCGGCTTAGGAGAAGGCAGCCTTaGACTGCTCCCGGAATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QISSQGHIGATGHVQSRLRRRQP*TAPGIC Trigger: GCAAATTCCGGGAGCAGTTCAAGGCTGCCTTCTCCT...AAGCCGGGACTGCACATGGCCTGTTGCACCAATGTGTCCCTGTGAACTAATTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR GCA 90 bp | CCACATGGAGAGTGTTTAAGCATTCCACAATGCCAACGAGCTCTAGCCTGTGCACAGAGAAGAGCCGGGTaGGATTGGCTAGCTCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PHGECLSIPQCQRALACAQRRAG*DWLAQA Trigger: TGCCTGAGCTAGCCAATCGCACCCGGCTCTTCTCTG...TGCACAGGCTAGAGCTCGTTGGCATTGTGGAATGCTTAAACACTCTCCATGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR GCA 90 bp | GCATGCAGTCCACACCTGGAGAGGGTAGACCGTGCTTCAGAGCTCACTGAGAAGGGGCAGATAACAGAGTaGAAAAACCAGCAGGACTAC | + |
|
Preference number: 4 (lower is better) Translates to: ACSPHLERVDRASELTEKGQITE*KNQQDY Trigger: GTAGTCCTGCTGGTTTTTGCACTCTGTTATCTGCCC...CTTCTCAGTGAGCTCTGAAGCACGGTCTACCCTCTCCAGGTGTGGACTGCATGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | CTGAACGAATGGCCACATGGAGAGTGTTTAAGCATTCCACAATGCCAACGAGCTGCACCAAGGCTGATGTaGTACCAGGGATCTGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LNEWPHGECLSIPQCQRAAPRLM*YQGSGG Trigger: GCCGCCAGATCCCTGGTACCACATCAGCCTTGGTGC...AGCTCGTTGGCATTGTGGAATGCTTAAACACTCTCCATGTGGCCATTCGTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | ACAGCACTAGACGGTTTGCAACACTGCTTTCTTGAGCAGCTTAAGCCCCTATCCACAAGGACTTGTGTCTaGCAGAGGAGCCGGGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: TALDGLQHCFLEQLKPLSTRTCV*QRSRDP Trigger: TGGGTCCCGGCTCCTCTGCCAGACACAAGTCCTTGT...GGATAGGGGCTTAAGCTGCTCAAGAAAGCAGTGTTGCAAACCGTCTAGTGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR TCA 90 bp | CCACATGGAGAGTGTTTAAGCATTCCACAATGCCAACGAGCTCTAGCCTGTGCAAGGAGAAGGCAGCCTTaGACTGCTCCCGGAATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PHGECLSIPQCQRALACARRRQP*TAPGIC Trigger: GCAAATTCCGGGAGCAGTTCAAGGCTGCCTTCTCCT...TGCACAGGCTAGAGCTCGTTGGCATTGTGGAATGCTTAAACACTCTCCATGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | CAAATTAGTTCACAGGGACACATTGGTGCAACAGGCCATGTGCAGTCCCGGCTTTTGAACAACAGTGGGTaGCAGATGGCATACCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: QISSQGHIGATGHVQSRLLNNSG*QMAYQR Trigger: CCGCTGGTATGCCATCTGCCACCCACTGTTGTTCAA...AAGCCGGGACTGCACATGGCCTGTTGCACCAATGTGTCCCTGTGAACTAATTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | ACGCCCACAGCACTAGACGGTTTGCAACACTGCTTTCTTGAGCAGCTTAAGCCCGCTCTTGAACAACAGTaGGTGGCAGATGGCATACCA | + |
|
Preference number: 4 (lower is better) Translates to: TPTALDGLQHCFLEQLKPALEQQ*VADGIP Trigger: TGGTATGCCATCTGCCACCCACTGTTGTTCAAGAGC...GGGCTTAAGCTGCTCAAGAAAGCAGTGTTGCAAACCGTCTAGTGCTGTGGGCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | CTGAACGAATGGCCACATGGAGAGTGTTTAAGCATTCCACAATGCCAACGAGCTCATGCTCAGAGACCTTaGAGACGGAGCAGCGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LNEWPHGECLSIPQCQRAHAQRP*RRSSGS Trigger: AGAGCCGCTGCTCCGTCTCCAAGGTCTCTGAGCATG...AGCTCGTTGGCATTGTGGAATGCTTAAACACTCTCCATGTGGCCATTCGTTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR TCA 90 bp | CTGAACGAATGGCCACATGGAGAGTGTTTAAGCATTCCACAATGCCAACGAGCTCCTGGAGATAGGGAATaGCCTTGCACAAAGCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LNEWPHGECLSIPQCQRAPGDRE*PCTKPG Trigger: GCCAGGCTTTGTGCAAGGTCATTCCCTATCTCCAGG...AGCTCGTTGGCATTGTGGAATGCTTAAACACTCTCCATGTGGCCATTCGTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR GCA 90 bp | CAAATTAGTTCACAGGGACACATTGGTGCAACAGGCCATGTGCAGTCCCGGCTTAGTCACCAGCACATCTaGCAGGGACAGGTTGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: QISSQGHIGATGHVQSRLSHQHI*QGQVDN Trigger: ATTGTCAACCTGTCCCTGGCAGATGTGCTGGTGACT...AAGCCGGGACTGCACATGGCCTGTTGCACCAATGTGTCCCTGTGAACTAATTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR GCA 90 bp | CCACATGGAGAGTGTTTAAGCATTCCACAATGCCAACGAGCTCTAGCCTGTGCAAAGGCAGCCTTGAACTaGTCCCGGAATTTGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: PHGECLSIPQCQRALACAKAALN*SRNLPL Trigger: CAGTGGCAAATTCCGGGAGCAGTTCAAGGCTGCCTT...TGCACAGGCTAGAGCTCGTTGGCATTGTGGAATGCTTAAACACTCTCCATGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | ACAGCACTAGACGGTTTGCAACACTGCTTTCTTGAGCAGCTTAAGCCCCTATCCCTCGTCCTCATAGTCTaGAGGCAGATGGAAGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TALDGLQHCFLEQLKPLSLVLIV*RQMEGF Trigger: GAACCCTTCCATCTGCCTCCAGACTATGAGGACGAG...GGATAGGGGCTTAAGCTGCTCAAGAAAGCAGTGTTGCAAACCGTCTAGTGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR GCA 90 bp | CCACATGGAGAGTGTTTAAGCATTCCACAATGCCAACGAGCTCTAGCCTGTGCAAGTCACCAGCACATCTaGCAGGGACAGGTTGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: PHGECLSIPQCQRALACASHQHI*QGQVDN Trigger: ATTGTCAACCTGTCCCTGGCAGATGTGCTGGTGACT...TGCACAGGCTAGAGCTCGTTGGCATTGTGGAATGCTTAAACACTCTCCATGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | CTGAACGAATGGCCACATGGAGAGTGTTTAAGCATTCCACAATGCCAACGAGCTCTCGTCCTCATAGTCTaGAGGCAGATGGAAGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LNEWPHGECLSIPQCQRALVLIV*RQMEGF Trigger: GAACCCTTCCATCTGCCTCCAGACTATGAGGACGAG...AGCTCGTTGGCATTGTGGAATGCTTAAACACTCTCCATGTGGCCATTCGTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CCA 90 bp | CCACATGGAGAGTGTTTAAGCATTCCACAATGCCAACGAGCTCTAGCCTGTGCAGCTCTTGAACAACAGTaGGTGGCAGATGGCATACCA | + |
|
Preference number: 4 (lower is better) Translates to: PHGECLSIPQCQRALACAALEQQ*VADGIP Trigger: TGGTATGCCATCTGCCACCCACTGTTGTTCAAGAGC...TGCACAGGCTAGAGCTCGTTGGCATTGTGGAATGCTTAAACACTCTCCATGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR GCA 90 bp | ACAGCACTAGACGGTTTGCAACACTGCTTTCTTGAGCAGCTTAAGCCCCTATCCGGGCAGATAACAGAGTaGAAAAACCAGCAGGACTAC | + |
|
Preference number: 4 (lower is better) Translates to: TALDGLQHCFLEQLKPLSGQITE*KNQQDY Trigger: GTAGTCCTGCTGGTTTTTGCACTCTGTTATCTGCCC...GGATAGGGGCTTAAGCTGCTCAAGAAAGCAGTGTTGCAAACCGTCTAGTGCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR GCA 90 bp | CTGAACGAATGGCCACATGGAGAGTGTTTAAGCATTCCACAATGCCAACGAGCTGGGCAGATAACAGAGTaGAAAAACCAGCAGGACTAC | + |
|
Preference number: 4 (lower is better) Translates to: LNEWPHGECLSIPQCQRAGQITE*KNQQDY Trigger: GTAGTCCTGCTGGTTTTTGCACTCTGTTATCTGCCC...AGCTCGTTGGCATTGTGGAATGCTTAAACACTCTCCATGTGGCCATTCGTTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS TCA 90 bp | AAGGCTCGGGCCCGGGGCTGGGGCTCTGTACAGAGGCCCTGGTGCTaGGCCTCCAGTTGTTCCGAGGGCCGTTTCCAGTTCCGCACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: KARARGWGSVQRPWC*ASSCSEGRFQFRTK Trigger: CTTGGTGCGGAACTGGAAACGGCCCTCGGAACAACTGGAGGCTCAGCACCAGGGCCTCTGTACAGAGCCCCAGCCCCGGGCCCGAGCCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 ENSMUST00000164887.3 |
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| CDS CCA 90 bp | TTGGCTAGCTCAGGCAGCACGCTGCTGCACTCCATGACAGCAGCCTaGGGCACCATGACAGCCAGCGACACAGCCCAGATGCCCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LASSGSTLLHSMTAA*GTMTASDTAQMPRM Trigger: CATCCTGGGCATCTGGGCTGTGTCGCTGGCTGTCATGGTGCCCCAGGCTGCTGTCATGGAGTGCAGCAGCGTGCTGCCTGAGCTAGCCAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 ENSMUST00000164887.3 |
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| CDS GCA 90 bp | GTCAGCACGACATGCTCAGAGACCTTGGAGACGGAGCAGCGGCTCTaGAAGGACAAGGACTTGTGTCTGGCAGAGGAGCCGGGACCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VSTTCSETLETEQRL*KDKDLCLAEEPGPR Trigger: TCTGGGTCCCGGCTCCTCTGCCAGACACAAGTCCTTGTCCTTGCAGAGCCGCTGCTCCGTCTCCAAGGTCTCTGAGCATGTCGTGCTGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 ENSMUST00000164887.3 |
||
| CDS-3UTR CAA 90 bp | CTAGCCTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGTGCTTCAGAGAAGAGCCGGGTGCGATaGGCTAGCTCAGGCAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: LACAACSPHLERVDRASEKSRVR*ASSGST Trigger: CGTGCTGCCTGAGCTAGCCAATCGCACCCGGCTCTT...CTCTGAAGCACGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAGGCTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CAA 90 bp | CTAGCCTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGTGCTTCAGAGCGGCGAGCTGTGCTCTaGAACAACAGTGGGTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LACAACSPHLERVDRASERRAVL*NNSGWQ Trigger: CTGCCACCCACTGTTGTTCAAGAGCACAGCTCGCCG...CTCTGAAGCACGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAGGCTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CAA 90 bp | AGTTCACAGGGACACATTGGTGCAACAGGCCATGTGCAGTCCCGGCTTCCAGTGTTCCCGGTCGCTGGCTaGGCGGAACATCCCGAACAC | + |
|
Preference number: 5 (lower is better) Translates to: SSQGHIGATGHVQSRLPVFPVAG*AEHPEH Trigger: GTGTTCGGGATGTTCCGCCAAGCCAGCGACCGGGAA...CACTGGAAGCCGGGACTGCACATGGCCTGTTGCACCAATGTGTCCCTGTGAACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CAA 90 bp | GCATGCAGTCCACACCTGGAGAGGGTAGACCGTGCTTCAGAGCTCACTGAGAAGTTCCCGGTCGCTGGCTaGGCGGAACATCCCGAACAC | + |
|
Preference number: 5 (lower is better) Translates to: ACSPHLERVDRASELTEKFPVAG*AEHPEH Trigger: GTGTTCGGGATGTTCCGCCAAGCCAGCGACCGGGAA...CTTCTCAGTGAGCTCTGAAGCACGGTCTACCCTCTCCAGGTGTGGACTGCATGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CAA 90 bp | AGAAAACCAGGACTGGCATCGCACAGCCTCTCACTGAACCGCAGCAGTCTTCCTAAGAGCCGGGTGCGATaGGCTAGCTCAGGCAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: RKPGLASHSLSLNRSSLPKSRVR*ASSGST Trigger: CGTGCTGCCTGAGCTAGCCAATCGCACCCGGCTCTT...AGGAAGACTGCTGCGGTTCAGTGAGAGGCTGTGCGATGCCAGTCCTGGTTTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CAA 90 bp | TTAGTTCACAGGGACACATTGGTGCAACAGGCCATGTGCAGTCCCGGCTTCCAGCGGCGAGCTGTGCTCTaGAACAACAGTGGGTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LVHRDTLVQQAMCSPGFQRRAVL*NNSGWQ Trigger: CTGCCACCCACTGTTGTTCAAGAGCACAGCTCGCCG...CTGGAAGCCGGGACTGCACATGGCCTGTTGCACCAATGTGTCCCTGTGAACTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| CDS-3UTR CAA 90 bp | CAACGAGCTCTAGCCTGTGCAGCATGCAGTCCACACCTGGAGAGGGTAGACCGTCAGGAGAAGGCAGCCTaGAACTGCTCCCGGAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: QRALACAACSPHLERVDRQEKAA*NCSRNL Trigger: CAAATTCCGGGAGCAGTTCAAGGCTGCCTTCTCCTG...ACGGTCTACCCTCTCCAGGTGTGGACTGCATGCTGCACAGGCTAGAGCTCGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| CDS TCA 90 bp | ATACCAGCGGTCCAGGGCGATGAAGCTGAGAGTCAGCACTGCCACTaGCACCGACACAGCCTGGAGATAGGGAATGACCTTGCACAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: IPAVQGDEAESQHCH*HRHSLEIGNDLAQS Trigger: GCTTTGTGCAAGGTCATTCCCTATCTCCAGGCTGTGTCGGTGTCAGTGGCAGTGCTGACTCTCAGCTTCATCGCCCTGGACCGCTGGTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 ENSMUST00000164887.3 |
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| CDS CCA 90 bp | GAGATAATCGCGCCACAGGTATCGGAGGAACTCGTCCTCATAGTCTaGAGGCAGATGGAAGGGTTCCCCACTACTAGTGGGGACTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: EIIAPQVSEELVLIV*RQMEGFPTTSGDSR Trigger: CCTGGAGTCCCCACTAGTAGTGGGGAACCCTTCCATCTGCCTCCAGACTATGAGGACGAGTTCCTCCGATACCTGTGGCGCGATTATCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 ENSMUST00000164887.3 |
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| CDS-3UTR CAA 90 bp | AGAAAACCAGGACTGGCATCGCACAGCCTCTCACTGAACCGCAGCAGTCTTCCTTGCAAGGACAAGGACTaGTGTCTGGCAGAGGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RKPGLASHSLSLNRSSLPCKDKD*CLAEEP Trigger: CGGCTCCTCTGCCAGACACAAGTCCTTGTCCTTGCA...AGGAAGACTGCTGCGGTTCAGTGAGAGGCTGTGCGATGCCAGTCCTGGTTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
||
| CDS-3UTR CAA 90 bp | CCACATGGAGAGTGTTTAAGCATTCCACAATGCCAACGAGCTCTAGCCTGTGCAAAGAGCCGGGTGCGATaGGCTAGCTCAGGCAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: PHGECLSIPQCQRALACAKSRVR*ASSGST Trigger: CGTGCTGCCTGAGCTAGCCAATCGCACCCGGCTCTT...TGCACAGGCTAGAGCTCGTTGGCATTGTGGAATGCTTAAACACTCTCCATGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| CDS-3UTR CAA 90 bp | AGAAAACCAGGACTGGCATCGCACAGCCTCTCACTGAACCGCAGCAGTCTTCCTCAGGAGAAGGCAGCCTaGAACTGCTCCCGGAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: RKPGLASHSLSLNRSSLPQEKAA*NCSRNL Trigger: CAAATTCCGGGAGCAGTTCAAGGCTGCCTTCTCCTG...AGGAAGACTGCTGCGGTTCAGTGAGAGGCTGTGCGATGCCAGTCCTGGTTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| CDS GCA 90 bp | CAGGGTATTGCCCACCAAGGCTATGAGGAACACAGCCACGTAGGCTaGAATGAGAACCCACTCGTACTGCTTCGGGTAGAGATAATCGCG | + |
|
Preference number: 5 (lower is better) Translates to: QGIAHQGYEEHSHVG*NENPLVLLRVEIIA Trigger: CGCGATTATCTCTACCCGAAGCAGTACGAGTGGGTTCTCATTGCAGCCTACGTGGCTGTGTTCCTCATAGCCTTGGTGGGCAATACCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 ENSMUST00000164887.3 |
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| CDS-3UTR CAA 90 bp | CTGAACGAATGGCCACATGGAGAGTGTTTAAGCATTCCACAATGCCAACGAGCTTTCCCGGTCGCTGGCTaGGCGGAACATCCCGAACAC | + |
|
Preference number: 5 (lower is better) Translates to: LNEWPHGECLSIPQCQRAFPVAG*AEHPEH Trigger: GTGTTCGGGATGTTCCGCCAAGCCAGCGACCGGGAA...AGCTCGTTGGCATTGTGGAATGCTTAAACACTCTCCATGTGGCCATTCGTTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| CDS-3UTR CAA 90 bp | AGTTCACAGGGACACATTGGTGCAACAGGCCATGTGCAGTCCCGGCTTCCAGTGACTCTCTTAAGGACATaGAGGACACTGATGGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SSQGHIGATGHVQSRLPVTLLRT*RTLMGR Trigger: TCTGCCCATCAGTGTCCTCAATGTCCTTAAGAGAGT...CACTGGAAGCCGGGACTGCACATGGCCTGTTGCACCAATGTGTCCCTGTGAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| CDS-3UTR CAA 90 bp | CACAACCTCAGAGAGGGGATGACTCTGGCAGAAAACCAGGACTGGCATCGCACAACTCTCTTAAGGACATaGAGGACACTGATGGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: HNLREGMTLAENQDWHRTTLLRT*RTLMGR Trigger: TCTGCCCATCAGTGTCCTCAATGTCCTTAAGAGAGT...TGTGCGATGCCAGTCCTGGTTTTCTGCCAGAGTCATCCCCTCTCTGAGGTTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| CDS-3UTR CAA 90 bp | TTAGTTCACAGGGACACATTGGTGCAACAGGCCATGTGCAGTCCCGGCTTCCAGACTCTCTTAAGGACATaGAGGACACTGATGGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LVHRDTLVQQAMCSPGFQTLLRT*RTLMGR Trigger: TCTGCCCATCAGTGTCCTCAATGTCCTTAAGAGAGT...CTGGAAGCCGGGACTGCACATGGCCTGTTGCACCAATGTGTCCCTGTGAACTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| CDS-3UTR CAA 90 bp | CTGAACGAATGGCCACATGGAGAGTGTTTAAGCATTCCACAATGCCAACGAGCTTGCAAGGACAAGGACTaGTGTCTGGCAGAGGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LNEWPHGECLSIPQCQRACKDKD*CLAEEP Trigger: CGGCTCCTCTGCCAGACACAAGTCCTTGTCCTTGCA...AGCTCGTTGGCATTGTGGAATGCTTAAACACTCTCCATGTGGCCATTCGTTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 |
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| CDS CCA 90 bp | GAGCTTGCGGAAGATCTGGAAATAGGCCATAGCCATGAGGCCCAGTaGGGCCAGGTAGGTGACAATGAAAAAGCAGCTGTGATAGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: ELAEDLEIGHSHEAQ*GQVGDNEKAAVIDL Trigger: AAGATCTATCACAGCTGCTTTTTCATTGTCACCTACCTGGCCCCACTGGGCCTCATGGCTATGGCCTATTTCCAGATCTTCCGCAAGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 ENSMUST00000164887.3 |
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| CDS GCA 90 bp | CACTCTCTTAAGGACATTGAGGACACTGATGGGCAGATAACAGAGTaGAAAAACCAGCAGGACTACCATCAGCATCTTAGCCGTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: HSLKDIEDTDGQITE*KNQQDYHQHLSRLP Trigger: AGGAAGACGGCTAAGATGCTGATGGTAGTCCTGCTGGTTTTTGCACTCTGTTATCTGCCCATCAGTGTCCTCAATGTCCTTAAGAGAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 ENSMUST00000164887.3 |
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| CDS TCA 72 bp | GCCCGGGGCTGGGGCTCTGTACAGAGGCCCTGGTGCTaGGCCTCCAGTTGTTCCGAGGGCCGTTTCCAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: ARGWGSVQRPWC*ASSCSEGRFQF Trigger: GAACTGGAAACGGCCCTCGGAACAACTGGAGGCTCAGCACCAGGGCCTCTGTACAGAGCCCCAGCCCCGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 ENSMUST00000164887.3 |
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| CDS CCA 72 bp | CCGAGGGCCGTTTCCAGTTCCGCACCAAGGCTGATGTaGTACCAGGGATCTGGCGGCCCCAGAGCTTGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: PRAVSSSAPRLM*YQGSGGPRACG Trigger: TCCGCAAGCTCTGGGGCCGCCAGATCCCTGGTACCACATCAGCCTTGGTGCGGAACTGGAAACGGCCCTCGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 ENSMUST00000164887.3 |
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| CDS CCA 72 bp | TCAGGCAGCACGCTGCTGCACTCCATGACAGCAGCCTaGGGCACCATGACAGCCAGCGACACAGCCCAGATG | + |
|
Preference number: 6 (lower is better) Translates to: SGSTLLHSMTAA*GTMTASDTAQM Trigger: CATCTGGGCTGTGTCGCTGGCTGTCATGGTGCCCCAGGCTGCTGTCATGGAGTGCAGCAGCGTGCTGCCTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 ENSMUST00000164887.3 |
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| CDS CAA 72 bp | CCCAGGATGGAGCCACGGGCACGGCGAGCTGTGCTCTaGAACAACAGTGGGTGGCAGATGGCATACCAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: PRMEPRARRAVL*NNSGWQMAYQR Trigger: CCGCTGGTATGCCATCTGCCACCCACTGTTGTTCAAGAGCACAGCTCGCCGTGCCCGTGGCTCCATCCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 ENSMUST00000164887.3 |
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| CDS CAA 72 bp | GGGCTCTGTACAGAGGCCCTGGTGCTGAGCCTCCAGTaGTTCCGAGGGCCGTTTCCAGTTCCGCACCAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GLCTEALVLSLQ*FRGPFPVPHQG Trigger: GCCTTGGTGCGGAACTGGAAACGGCCCTCGGAACAACTGGAGGCTCAGCACCAGGGCCTCTGTACAGAGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 ENSMUST00000164887.3 |
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| CDS TCA 72 bp | CGGCACTGTTGGCGTACACTAGCCAGTGGGAGAAGGTaGAGCAGGCGTAGACGGCTTCCCGGTCGCTGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: RHCWRTLASGRR*SRRRRLPGRWL Trigger: AAGCCAGCGACCGGGAAGCCGTCTACGCCTGCTTCACCTTCTCCCACTGGCTAGTGTACGCCAACAGTGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 ENSMUST00000164887.3 |
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| CDS GCA 72 bp | CAGGACAGCACGGTAGTGACGGTGGTCAGCACGACATaGTCAGAGACCTTGGAGACGGAGCAGCGGCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: QDSTVVTVVSTT*SETLETEQRLC Trigger: GCAGAGCCGCTGCTCCGTCTCCAAGGTCTCTGAGCATGTCGTGCTGACCACCGTCACTACCGTGCTGTCCTG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 ENSMUST00000164887.3 |
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| CDS TCA 72 bp | CCTTGCACAAAGCCTGGCCGAAGAGCCACGACTCGGTaGTGTCCACTAACAGGCTGGCAGGCAGGCAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: PCTKPGRRATTR*CPLTGWQAGRW Trigger: CCATCTGCCTGCCTGCCAGCCTGTTAGTGGACATCACCGAGTCGTGGCTCTTCGGCCAGGCTTTGTGCAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 ENSMUST00000164887.3 |
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| CDS TCA 72 bp | TTGTTCCGAGGGCCGTTTCCAGTTCCGCACCAAGGCTaGTGTGGTACCAGGGATCTGGCGGCCCCAGAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LFRGPFPVPHQG*CGTRDLAAPEL Trigger: AAGCTCTGGGGCCGCCAGATCCCTGGTACCACATCAGCCTTGGTGCGGAACTGGAAACGGCCCTCGGAACAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 ENSMUST00000164887.3 |
||
| CDS GCA 72 bp | CTGCCCAGTGCTCATCACAGACAGAGAAGAGCCGGGTaGGATTGGCTAGCTCAGGCAGCACGCTGCTGCACT | + |
|
Preference number: 6 (lower is better) Translates to: LPSAHHRQRRAG*DWLAQAARCCT Trigger: AGTGCAGCAGCGTGCTGCCTGAGCTAGCCAATCGCACCCGGCTCTTCTCTGTCTGTGATGAGCACTGGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 ENSMUST00000164887.3 |
||
| CDS GCA 72 bp | ACATGCTCAGAGACCTTGGAGACGGAGCAGCGGCTCTaGAAGGACAAGGACTTGTGTCTGGCAGAGGAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: TCSETLETEQRL*KDKDLCLAEEP Trigger: CGGCTCCTCTGCCAGACACAAGTCCTTGTCCTTGCAGAGCCGCTGCTCCGTCTCCAAGGTCTCTGAGCATGT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 ENSMUST00000164887.3 |
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| CDS CAA 90 bp | GTGGGAGAAGGTGAAGCAGGCGTAGACGGCTTCCCGGTCGCTGGCTaGGCGGAACATCCCGAACACTCTCTTAAGGACATTGAGGACACT | + |
|
Preference number: 6 (lower is better) Translates to: VGEGEAGVDGFPVAG*AEHPEHSLKDIEDT Trigger: AGTGTCCTCAATGTCCTTAAGAGAGTGTTCGGGATGTTCCGCCAAGCCAGCGACCGGGAAGCCGTCTACGCCTGCTTCACCTTCTCCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 ENSMUST00000164887.3 |
||
| CDS TCA 72 bp | CTGCCACTGACACCGACACAGCCTGGAGATAGGGAATaGCCTTGCACAAAGCCTGGCCGAAGAGCCACGACT | + |
|
Preference number: 6 (lower is better) Translates to: LPLTPTQPGDRE*PCTKPGRRATT Trigger: AGTCGTGGCTCTTCGGCCAGGCTTTGTGCAAGGTCATTCCCTATCTCCAGGCTGTGTCGGTGTCAGTGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 ENSMUST00000164887.3 |
||
| CDS CCA 72 bp | GCGCCACAGGTATCGGAGGAACTCGTCCTCATAGTCTaGAGGCAGATGGAAGGGTTCCCCACTACTAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: APQVSEELVLIV*RQMEGFPTTSG Trigger: CCCACTAGTAGTGGGGAACCCTTCCATCTGCCTCCAGACTATGAGGACGAGTTCCTCCGATACCTGTGGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 ENSMUST00000164887.3 |
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| CDS CAA 72 bp | GGTGAAGCAGGCGTAGACGGCTTCCCGGTCGCTGGCTaGGCGGAACATCCCGAACACTCTCTTAAGGACATT | + |
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Preference number: 6 (lower is better) Translates to: GEAGVDGFPVAG*AEHPEHSLKDI Trigger: AATGTCCTTAAGAGAGTGTTCGGGATGTTCCGCCAAGCCAGCGACCGGGAAGCCGTCTACGCCTGCTTCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 ENSMUST00000164887.3 |
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| CDS TCA 72 bp | GTCCAGGGCGATGAAGCTGAGAGTCAGCACTGCCACTaGCACCGACACAGCCTGGAGATAGGGAATGACCTT | + |
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Preference number: 6 (lower is better) Translates to: VQGDEAESQHCH*HRHSLEIGNDL Trigger: AAGGTCATTCCCTATCTCCAGGCTGTGTCGGTGTCAGTGGCAGTGCTGACTCTCAGCTTCATCGCCCTGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 ENSMUST00000164887.3 |
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| CDS GCA 72 bp | AAGGACATTGAGGACACTGATGGGCAGATAACAGAGTaGAAAAACCAGCAGGACTACCATCAGCATCTTAGC | + |
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Preference number: 6 (lower is better) Translates to: KDIEDTDGQITE*KNQQDYHQHLS Trigger: GCTAAGATGCTGATGGTAGTCCTGCTGGTTTTTGCACTCTGTTATCTGCCCATCAGTGTCCTCAATGTCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030562.13 ENSMUST00000119423.8 ENSMUST00000120154.9 ENSMUST00000164887.3 |
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