Pregenerated sensors for HCN3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028051Ensembl transcript IDs: ENSMUST00000029686.4
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCGTCCACACAGGAGCTGCGGAGGGCAGACTACAGTGGGCAGACGTaGATTCTCACTTGGTGTGGACAAGGAGGGCCCACAGGTGCCAGT | + |
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Preference number: 1 (lower is better) Translates to: ASTQELRRADYSGQT*ILTWCGQGGPTGAS Trigger: ACTGGCACCTGTGGGCCCTCCTTGTCCACACCAAGTGAGAATCCACGTCTGCCCACTGTAGTCTGCCCTCCGCAGCTCCTGTGTGGACGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| 3UTR CCA 90 bp | GCGGAGGGCAGACTACAGTGGGCAGACGTGGATTCTCACTTGGTGTaGACAAGGAGGGCCCACAGGTGCCAGTCAGAGGGTCGATGTTCA | + |
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Preference number: 1 (lower is better) Translates to: AEGRLQWADVDSHLV*TRRAHRCQSEGRCS Trigger: TGAACATCGACCCTCTGACTGGCACCTGTGGGCCCTCCTTGTCCACACCAAGTGAGAATCCACGTCTGCCCACTGTAGTCTGCCCTCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| 3UTR CCA 90 bp | GTGGGCAGGGGATTATTCTTGTCCCTGAGAAGGTGGAGGGGCTACTaGCCCACCCTTCCTAGGATTGGATACTCCAGGCCTCCCTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: VGRGLFLSLRRWRGY*PTLPRIGYSRPPSS Trigger: AGAAGAGGGAGGCCTGGAGTATCCAATCCTAGGAAGGGTGGGCCAGTAGCCCCTCCACCTTCTCAGGGACAAGAATAATCCCCTGCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| 3UTR-3UTR CCA 90 bp | AGGGGAACAGAGCGGGTGGGCAGGGGATTATTCTTGTCCCTGAGAAGGTGGAGGGAAGAGAGGACGCACTaGCACCACCTGCAGGGTCAC | + |
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Preference number: 2 (lower is better) Translates to: RGTERVGRGLFLSLRRWREERTH*HHLQGH Trigger: GTGACCCTGCAGGTGGTGCCAGTGCGTCCTCTCTTC...CCTCCACCTTCTCAGGGACAAGAATAATCCCCTGCCCACCCGCTCTGTTCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| 3UTR-3UTR CCA 90 bp | AGGGGAACAGAGCGGGTGGGCAGGGGATTATTCTTGTCCCTGAGAAGGTGGAGGGCCCCTACCAGAAGGTaGGGAGGACAAAGGAATGAG | + |
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Preference number: 2 (lower is better) Translates to: RGTERVGRGLFLSLRRWRAPTRR*GGQRNE Trigger: CTCATTCCTTTGTCCTCCCCACCTTCTGGTAGGGGC...CCTCCACCTTCTCAGGGACAAGAATAATCCCCTGCCCACCCGCTCTGTTCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| 3UTR-3UTR CCA 90 bp | TGCTGCAGATGGCATTGTGCAAGGACCACAAAGATGTTCCCCAGGCCCCTACCAGATTCTCACTTGGTGTaGACAAGGAGGGCCCACAGG | + |
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Preference number: 2 (lower is better) Translates to: CCRWHCARTTKMFPRPLPDSHLV*TRRAHR Trigger: CCTGTGGGCCCTCCTTGTCCACACCAAGTGAGAATC...TGGTAGGGGCCTGGGGAACATCTTTGTGGTCCTTGCACAATGCCATCTGCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| 3UTR-3UTR GCA 90 bp | TCACTGACAGGGAGACAGCCGTCTAGTTACTCGGCAGTGATGGAGGCAGCAAGTTTAGCAGGCTGCAGCTaGTTTGAGCTGAGGACACAG | + |
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Preference number: 2 (lower is better) Translates to: SLTGRQPSSYSAVMEAASLAGCS*FELRTQ Trigger: CTGTGTCCTCAGCTCAAAGCAGCTGCAGCCTGCTAA...ACTTGCTGCCTCCATCACTGCCGAGTAACTAGACGGCTGTCTCCCTGTCAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| 3UTR-3UTR CCA 90 bp | CTGCTGGGTCAGATGAAATTCTTCCACAACCACTTTGTCCCCACATACAGATCAATAAAGGCAGGGCTGTaGGCCCAGGCCTGCGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: LLGQMKFFHNHFVPTYRSIKAGL*AQACAW Trigger: CCAGGCGCAGGCCTGGGCCCACAGCCCTGCCTTTAT...TGATCTGTATGTGGGGACAAAGTGGTTGTGGAAGAATTTCATCTGACCCAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| 3UTR-3UTR GCA 90 bp | GGCCCACCCTTCCTAGGATTGGATACTCCAGGCCTCCCTCTTCTTCACAACAGTTTAGGATTAGCAGGCTaGAGCTGCTTTGAGCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: GPPFLGLDTPGLPLLHNSLGLAG*SCFELR Trigger: CCTCAGCTCAAAGCAGCTGCAGCCTGCTAATCCTAA...ACTGTTGTGAAGAAGAGGGAGGCCTGGAGTATCCAATCCTAGGAAGGGTGGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| 3UTR-3UTR CCA 90 bp | TACTGGCCCACCCTTCCTAGGATTGGATACTCCAGGCCTCCCTCTTCTTCACAACTACGACAAAGGAGATaGGAAGAGAGGACGCACTGG | + |
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Preference number: 2 (lower is better) Translates to: YWPTLPRIGYSRPPSSSQLRQRR*EERTHW Trigger: CCAGTGCGTCCTCTCTTCCCATCTCCTTTGTCGTAG...TTGTGAAGAAGAGGGAGGCCTGGAGTATCCAATCCTAGGAAGGGTGGGCCAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| 3UTR-3UTR TCA 90 bp | CATTGTATAGCTCTGACTGGCCCCAGACTCCTAGAAATCCTCCTGCCTGACCCTTGTTCTCTTGCCCACTaGTCTGCTGGGTCAGATGAA | + |
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Preference number: 2 (lower is better) Translates to: HCIALTGPRLLEILLPDPCSLAH*SAGSDE Trigger: TTCATCTGACCCAGCAGATCAGTGGGCAAGAGAACA...AGGGTCAGGCAGGAGGATTTCTAGGAGTCTGGGGCCAGTCAGAGCTATACAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| 3UTR-3UTR TCA 90 bp | GAGTTGTGTGGTCCTGGCCCCATGCTACAGTGTACTTCTGAAGGGGAACAGAGCCCTCATCACAGAATTTaGGTATTGCTGCAGATGGCA | + |
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Preference number: 2 (lower is better) Translates to: ELCGPGPMLQCTSEGEQSPHHRI*VLLQMA Trigger: TGCCATCTGCAGCAATACTCAAATTCTGTGATGAGG...GCTCTGTTCCCCTTCAGAAGTACACTGTAGCATGGGGCCAGGACCACACAACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| 3UTR-3UTR GCA 90 bp | GGCCCACCCTTCCTAGGATTGGATACTCCAGGCCTCCCTCTTCTTCACAACAGTCTGCAGATGGCATTGTaGAAGGACCACAAAGATGTT | + |
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Preference number: 2 (lower is better) Translates to: GPPFLGLDTPGLPLLHNSLQMAL*KDHKDV Trigger: AACATCTTTGTGGTCCTTGCACAATGCCATCTGCAG...ACTGTTGTGAAGAAGAGGGAGGCCTGGAGTATCCAATCCTAGGAAGGGTGGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| 3UTR-3UTR TCA 90 bp | GACCCTCCTGAGGGGGTAAGGACTGCAGGCATGAGTGACCAGCTGGACTTTAGGGGACAAAGGAATGAGTaGATAAGTGAACAAGTCAAA | + |
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Preference number: 2 (lower is better) Translates to: DPPEGVRTAGMSDQLDFRGQRNE*ISEQVK Trigger: TTTGACTTGTTCACTTATTCACTCATTCCTTTGTCC...CCTAAAGTCCAGCTGGTCACTCATGCCTGCAGTCCTTACCCCCTCAGGAGGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| 3UTR-3UTR CCA 90 bp | GAGTTGTGTGGTCCTGGCCCCATGCTACAGTGTACTTCTGAAGGGGAACAGAGCCGAGTTATTTCTACTTaGCAGTGGATACACAGTACC | + |
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Preference number: 2 (lower is better) Translates to: ELCGPGPMLQCTSEGEQSRVIST*QWIHST Trigger: GGTACTGTGTATCCACTGCCAAGTAGAAATAACTCG...GCTCTGTTCCCCTTCAGAAGTACACTGTAGCATGGGGCCAGGACCACACAACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| 3UTR TCA 72 bp | GAACAGAGCGGGTGGGCAGGGGATTATTCTTGTCCCTaGGAAGGTGGAGGGGCTACTGGCCCACCCTTCCTA | + |
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Preference number: 3 (lower is better) Translates to: EQSGWAGDYSCP*EGGGATGPPFL Trigger: TAGGAAGGGTGGGCCAGTAGCCCCTCCACCTTCTCAGGGACAAGAATAATCCCCTGCCCACCCGCTCTGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| 3UTR CCA 72 bp | AGGGCAGACTACAGTGGGCAGACGTGGATTCTCACTTaGTGTGGACAAGGAGGGCCCACAGGTGCCAGTCAG | + |
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Preference number: 3 (lower is better) Translates to: RADYSGQTWILT*CGQGGPTGASQ Trigger: CTGACTGGCACCTGTGGGCCCTCCTTGTCCACACCAAGTGAGAATCCACGTCTGCCCACTGTAGTCTGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| 3UTR CCA 72 bp | TGCGTCCACACAGGAGCTGCGGAGGGCAGACTACAGTaGGCAGACGTGGATTCTCACTTGGTGTGGACAAGG | + |
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Preference number: 3 (lower is better) Translates to: CVHTGAAEGRLQ*ADVDSHLVWTR Trigger: CCTTGTCCACACCAAGTGAGAATCCACGTCTGCCCACTGTAGTCTGCCCTCCGCAGCTCCTGTGTGGACGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| 3UTR-3UTR CAA 90 bp | GACCCTCCTGAGGGGGTAAGGACTGCAGGCATGAGTGACCAGCTGGACTTTAGGGGCCTGGGGACACCCTaGTTAAAGGGCTTCGAGTTA | + |
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Preference number: 3 (lower is better) Translates to: DPPEGVRTAGMSDQLDFRGLGTP*LKGFEL Trigger: TAACTCGAAGCCCTTTAACAAGGGTGTCCCCAGGCC...CCTAAAGTCCAGCTGGTCACTCATGCCTGCAGTCCTTACCCCCTCAGGAGGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| 3UTR CCA 72 bp | AGACTACAGTGGGCAGACGTGGATTCTCACTTGGTGTaGACAAGGAGGGCCCACAGGTGCCAGTCAGAGGGT | + |
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Preference number: 3 (lower is better) Translates to: RLQWADVDSHLV*TRRAHRCQSEG Trigger: ACCCTCTGACTGGCACCTGTGGGCCCTCCTTGTCCACACCAAGTGAGAATCCACGTCTGCCCACTGTAGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| 3UTR CCA 72 bp | GGATTATTCTTGTCCCTGAGAAGGTGGAGGGGCTACTaGCCCACCCTTCCTAGGATTGGATACTCCAGGCCT | + |
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Preference number: 3 (lower is better) Translates to: GLFLSLRRWRGY*PTLPRIGYSRP Trigger: AGGCCTGGAGTATCCAATCCTAGGAAGGGTGGGCCAGTAGCCCCTCCACCTTCTCAGGGACAAGAATAATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| 3UTR CCA 72 bp | CACAAACCATGGAGCCGAGCTTACGAGCCACTAATCTaGCTGTTCTCTTGCCCACTGATCTGCTGGGTCAGA | + |
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Preference number: 3 (lower is better) Translates to: HKPWSRAYEPLI*LFSCPLICWVR Trigger: TCTGACCCAGCAGATCAGTGGGCAAGAGAACAGCCAGATTAGTGGCTCGTAAGCTCGGCTCCATGGTTTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| 3UTR-3UTR CAA 90 bp | TACTGGCCCACCCTTCCTAGGATTGGATACTCCAGGCCTCCCTCTTCTTCACAAGGAGGCAGCAAGTACTaGTGCTTAATAAAGGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: YWPTLPRIGYSRPPSSSQGGSKY*CLIKAG Trigger: CCCTGCCTTTATTAAGCACAAGTACTTGCTGCCTCC...TTGTGAAGAAGAGGGAGGCCTGGAGTATCCAATCCTAGGAAGGGTGGGCCAGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| 3UTR TCA 72 bp | TGGCTGTTCTCTTGCCCACTGATCTGCTGGGTCAGATaGAATTCTTCCACAACCACTTTGTCCCCACATACA | + |
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Preference number: 3 (lower is better) Translates to: WLFSCPLICWVR*NSSTTTLSPHT Trigger: TGTATGTGGGGACAAAGTGGTTGTGGAAGAATTTCATCTGACCCAGCAGATCAGTGGGCAAGAGAACAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| 3UTR CCA 72 bp | CACCACCTCATCACAGAATTTGAGTATTGCTGCAGATaGCATTGTGCAAGGACCACAAAGATGTTCCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: HHLITEFEYCCR*HCARTTKMFPR Trigger: CCTGGGGAACATCTTTGTGGTCCTTGCACAATGCCATCTGCAGCAATACTCAAATTCTGTGATGAGGTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| 3UTR TCA 72 bp | GGGTATGTGATTAGGATTAGCAGGCTGCAGCTGCTTTaGGCTGAGGACACAGAGAATAGCTTTGTGGTGATA | + |
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Preference number: 3 (lower is better) Translates to: GYVIRISRLQLL*AEDTENSFVVI Trigger: TATCACCACAAAGCTATTCTCTGTGTCCTCAGCTCAAAGCAGCTGCAGCCTGCTAATCCTAATCACATACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR CCA 90 bp | CTGCGCCTGGCAGGACCGTGGCCTGGGGACACCCTTGTTAAAGGGCTTCGAGTTTCGGACAGGCACCAGTaGGGAGGCTGGGGAGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: LRLAGPWPGDTLVKGLRVSDRHQ*GGWGAC Trigger: GCAGGCTCCCCAGCCTCCCCACTGGTGCCTGTCCGA...AACTCGAAGCCCTTTAACAAGGGTGTCCCCAGGCCACGGTCCTGCCAGGCGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR TCA 90 bp | CTGCGCCTGGCAGGACCGTGGCCTGGGGACACCCTTGTTAAAGGGCTTCGAGTTAGAGGGCCTCGCTGGTaGGTCAAGGCTATGGCCACG | + |
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Preference number: 4 (lower is better) Translates to: LRLAGPWPGDTLVKGLRVRGPRW*VKAMAT Trigger: CGTGGCCATAGCCTTGACTCACCAGCGAGGCCCTCT...AACTCGAAGCCCTTTAACAAGGGTGTCCCCAGGCCACGGTCCTGCCAGGCGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR CCA 90 bp | AAGGAGATGGGAAGAGAGGACGCACTGGCACCACCTGCAGGGTCACTGACAGGGCCGAGCACCTCCTCCTaGGGGAGGGCCCAACAGAGA | + |
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Preference number: 4 (lower is better) Translates to: KEMGREDALAPPAGSLTGPSTSS*GRAQQR Trigger: TCTCTGTTGGGCCCTCCCCCAGGAGGAGGTGCTCGG...CCCTGTCAGTGACCCTGCAGGTGGTGCCAGTGCGTCCTCTCTTCCCATCTCCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR TCA 90 bp | GACCCTCCTGAGGGGGTAAGGACTGCAGGCATGAGTGACCAGCTGGACTTTAGGAGTAGGATCCATCAGTaGGGCGGGTGTCGCGGGCGC | + |
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Preference number: 4 (lower is better) Translates to: DPPEGVRTAGMSDQLDFRSRIHQ*GGCRGR Trigger: GCGCCCGCGACACCCGCCTCACTGATGGATCCTACT...CCTAAAGTCCAGCTGGTCACTCATGCCTGCAGTCCTTACCCCCTCAGGAGGGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR GCA 90 bp | ACAGAGCGGGTGGGCAGGGGATTATTCTTGTCCCTGAGAAGGTGGAGGGGCTACGCCAGACGTCAGGCATaGCTACCGGTGCCTGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: TERVGRGLFLSLRRWRGYARRQA*LPVPAA Trigger: GGCAGCAGGCACCGGTAGGCATGCCTGACGTCTGGC...GTAGCCCCTCCACCTTCTCAGGGACAAGAATAATCCCCTGCCCACCCGCTCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR GCA 90 bp | ACAGAGCGGGTGGGCAGGGGATTATTCTTGTCCCTGAGAAGGTGGAGGGGCTACGGAGGTCACAGCAGCTaGCTGCAGAGGGGCGTGCAC | + |
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Preference number: 4 (lower is better) Translates to: TERVGRGLFLSLRRWRGYGGHSS*LQRGVH Trigger: GTGCACGCCCCTCTGCAGGCAGCTGCTGTGACCTCC...GTAGCCCCTCCACCTTCTCAGGGACAAGAATAATCCCCTGCCCACCCGCTCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR CCA 90 bp | AAGGAGATGGGAAGAGAGGACGCACTGGCACCACCTGCAGGGTCACTGACAGGGGCCTTGAACAGGGCGTaGGAATACTGGCGGCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: KEMGREDALAPPAGSLTGALNRA*EYWRPH Trigger: GTGGGGCCGCCAGTATTCCCACGCCCTGTTCAAGGC...CCCTGTCAGTGACCCTGCAGGTGGTGCCAGTGCGTCCTCTCTTCCCATCTCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR CCA 90 bp | GGCCCACCCTTCCTAGGATTGGATACTCCAGGCCTCCCTCTTCTTCACAACAGTCAGGCAGGCGAGAAGTaGACGCCCAGGGTCCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: GPPFLGLDTPGLPLLHNSQAGEK*TPRVPG Trigger: CCCGGGGACCCTGGGCGTCCACTTCTCGCCTGCCTG...ACTGTTGTGAAGAAGAGGGAGGCCTGGAGTATCCAATCCTAGGAAGGGTGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR CCA 90 bp | CTGCGCCTGGCAGGACCGTGGCCTGGGGACACCCTTGTTAAAGGGCTTCGAGTTTGGCTGGACTGTCCCTaGAGGTTTGGCCAAGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: LRLAGPWPGDTLVKGLRVWLDCP*RFGQEP Trigger: GGGCTCTTGGCCAAACCTCCAGGGACAGTCCAGCCA...AACTCGAAGCCCTTTAACAAGGGTGTCCCCAGGCCACGGTCCTGCCAGGCGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR CCA 90 bp | GACCCTCCTGAGGGGGTAAGGACTGCAGGCATGAGTGACCAGCTGGACTTTAGGCTGTCCCTGGAGGTTTaGCCAAGAGCCCAGAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: DPPEGVRTAGMSDQLDFRLSLEV*PRAQRG Trigger: CCCCCTCTGGGCTCTTGGCCAAACCTCCAGGGACAG...CCTAAAGTCCAGCTGGTCACTCATGCCTGCAGTCCTTACCCCCTCAGGAGGGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR TCA 90 bp | AGGGGAACAGAGCGGGTGGGCAGGGGATTATTCTTGTCCCTGAGAAGGTGGAGGGGAGAGAGAACTTGTTaGCCGTCGGCTGCAGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: RGTERVGRGLFLSLRRWRGERTC*PSAAAA Trigger: CGCTGCTGCAGCCGACGGTCAACAAGTTCTCTCTCC...CCTCCACCTTCTCAGGGACAAGAATAATCCCCTGCCCACCCGCTCTGTTCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR GCA 90 bp | AGGGGAACAGAGCGGGTGGGCAGGGGATTATTCTTGTCCCTGAGAAGGTGGAGGAGAGCCATCCCCTGTTaGTCGCTGAGGCAGAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: RGTERVGRGLFLSLRRWRRAIPC*SLRQRG Trigger: CCCTCTCTGCCTCAGCGAGCAACAGGGGATGGCTCT...CCTCCACCTTCTCAGGGACAAGAATAATCCCCTGCCCACCCGCTCTGTTCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR CCA 90 bp | CTGCGCCTGGCAGGACCGTGGCCTGGGGACACCCTTGTTAAAGGGCTTCGAGTTGGTGAGTCAAGGCTATaGCCACGTTGGAGGTCACAG | + |
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Preference number: 4 (lower is better) Translates to: LRLAGPWPGDTLVKGLRVGESRL*PRWRSQ Trigger: CTGTGACCTCCAACGTGGCCATAGCCTTGACTCACC...AACTCGAAGCCCTTTAACAAGGGTGTCCCCAGGCCACGGTCCTGCCAGGCGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR TCA 90 bp | AAGGAGATGGGAAGAGAGGACGCACTGGCACCACCTGCAGGGTCACTGACAGGGCCACAGGCAGAACTATaGGGTTCCCCACCATCAGCA | + |
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Preference number: 4 (lower is better) Translates to: KEMGREDALAPPAGSLTGPQAEL*GSPPSA Trigger: TGCTGATGGTGGGGAACCTCATAGTTCTGCCTGTGG...CCCTGTCAGTGACCCTGCAGGTGGTGCCAGTGCGTCCTCTCTTCCCATCTCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR GCA 90 bp | GACCCTCCTGAGGGGGTAAGGACTGCAGGCATGAGTGACCAGCTGGACTTTAGGCAACCAGGAACCAGGTaGGCAGGTAACGCGTTCGGA | + |
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Preference number: 4 (lower is better) Translates to: DPPEGVRTAGMSDQLDFRQPGTR*AGNAFG Trigger: TCCGAACGCGTTACCTGCGCACCTGGTTCCTGGTTG...CCTAAAGTCCAGCTGGTCACTCATGCCTGCAGTCCTTACCCCCTCAGGAGGGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR GCA 90 bp | AAGGAGATGGGAAGAGAGGACGCACTGGCACCACCTGCAGGGTCACTGACAGGGTCGGACGGGAAGTCCTaGAGCATAGGGACCAGAAAC | + |
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Preference number: 4 (lower is better) Translates to: KEMGREDALAPPAGSLTGSDGKS*SIGTRN Trigger: GTTTCTGGTCCCTATGCTGCAGGACTTCCCGTCCGA...CCCTGTCAGTGACCCTGCAGGTGGTGCCAGTGCGTCCTCTCTTCCCATCTCCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR GCA 90 bp | CATTGTATAGCTCTGACTGGCCCCAGACTCCTAGAAATCCTCCTGCCTGACCCTTACTCGTGGATGCGCTaGCGGGTGTCAGCGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: HCIALTGPRLLEILLPDPYSWMR*RVSAGS Trigger: GCTGCCCGCTGACACCCGGCAGCGCATCCACGAGTA...AGGGTCAGGCAGGAGGATTTCTAGGAGTCTGGGGCCAGTCAGAGCTATACAATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR GCA 90 bp | GAGTTGTGTGGTCCTGGCCCCATGCTACAGTGTACTTCTGAAGGGGAACAGAGCGTCACAGCAGCTGCCTaGAGAGGGGCGTGCACCAGT | + |
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Preference number: 4 (lower is better) Translates to: ELCGPGPMLQCTSEGEQSVTAAA*RGACTS Trigger: ACTGGTGCACGCCCCTCTGCAGGCAGCTGCTGTGAC...GCTCTGTTCCCCTTCAGAAGTACACTGTAGCATGGGGCCAGGACCACACAACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR CCA 90 bp | CATTGTATAGCTCTGACTGGCCCCAGACTCCTAGAAATCCTCCTGCCTGACCCTCGTTCGGATGGCCCTTaGCGCCAGCAGGATCTCGGC | + |
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Preference number: 4 (lower is better) Translates to: HCIALTGPRLLEILLPDPRSDGP*RQQDLG Trigger: GCCGAGATCCTGCTGGCGCCAAGGGCCATCCGAACG...AGGGTCAGGCAGGAGGATTTCTAGGAGTCTGGGGCCAGTCAGAGCTATACAATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR CCA 90 bp | GACCCTCCTGAGGGGGTAAGGACTGCAGGCATGAGTGACCAGCTGGACTTTAGGTCACCATGCGGTTCATaGAGACCCAGCAGTCGGACG | + |
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Preference number: 4 (lower is better) Translates to: DPPEGVRTAGMSDQLDFRSPCGS*RPSSRT Trigger: CGTCCGACTGCTGGGTCTCCATGAACCGCATGGTGA...CCTAAAGTCCAGCTGGTCACTCATGCCTGCAGTCCTTACCCCCTCAGGAGGGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR CCA 90 bp | ACAGAGCGGGTGGGCAGGGGATTATTCTTGTCCCTGAGAAGGTGGAGGGGCTACAGCCCTGCGCATCATTaGGAACTCCTCAAGCACCGC | + |
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Preference number: 4 (lower is better) Translates to: TERVGRGLFLSLRRWRGYSPAHH*ELLKHR Trigger: GCGGTGCTTGAGGAGTTCCCAATGATGCGCAGGGCT...GTAGCCCCTCCACCTTCTCAGGGACAAGAATAATCCCCTGCCCACCCGCTCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR CCA 90 bp | GGCCCACCCTTCCTAGGATTGGATACTCCAGGCCTCCCTCTTCTTCACAACAGTGAGGGTTCGGGCAGGTaGAGCAGGCAGGCGAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GPPFLGLDTPGLPLLHNSEGSGR*SRQARS Trigger: ACTTCTCGCCTGCCTGCTCCACCTGCCCGAACCCTC...ACTGTTGTGAAGAAGAGGGAGGCCTGGAGTATCCAATCCTAGGAAGGGTGGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS-3UTR TCA 90 bp | AGGGGAACAGAGCGGGTGGGCAGGGGATTATTCTTGTCCCTGAGAAGGTGGAGGTGCCAGTTCGGAAGTTaGGCACCAGATCCAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RGTERVGRGLFLSLRRWRCQFGS*APDPAG Trigger: TCCTGCTGGATCTGGTGCTCAACTTCCGAACTGGCA...CCTCCACCTTCTCAGGGACAAGAATAATCCCCTGCCCACCCGCTCTGTTCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS-3UTR TCA 90 bp | CATTGTATAGCTCTGACTGGCCCCAGACTCCTAGAAATCCTCCTGCCTGACCCTCCAAATGCTGCTCCATaGCGCCACCGCTGCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HCIALTGPRLLEILLPDPPNAAP*RHRCCL Trigger: CAGGCAGCAGCGGTGGCGTCATGGAGCAGCATTTGG...AGGGTCAGGCAGGAGGATTTCTAGGAGTCTGGGGCCAGTCAGAGCTATACAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS-3UTR TCA 90 bp | ACAGGGAGACAGCCGTCTAGTTACTCGGCAGTGATGGAGGCAGCAAGTACTTGTTCCCCTGTTGCTCGCTaGGGCAGAGAGGGTTGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: TGRQPSSYSAVMEAASTCSPVAR*GREGCE Trigger: CTCGCAACCCTCTCTGCCTCAGCGAGCAACAGGGGA...ACAAGTACTTGCTGCCTCCATCACTGCCGAGTAACTAGACGGCTGTCTCCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS-3UTR GCA 90 bp | TCACTGACAGGGAGACAGCCGTCTAGTTACTCGGCAGTGATGGAGGCAGCAAGTGAGCTTGGTGAGCACTaGGGTGACGAAGCTGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLTGRQPSSYSAVMEAASELGEH*GDEAGV Trigger: GACCCCAGCTTCGTCACCGCAGTGCTCACCAAGCTC...ACTTGCTGCCTCCATCACTGCCGAGTAACTAGACGGCTGTCTCCCTGTCAGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS-3UTR CCA 90 bp | ACAGAGCGGGTGGGCAGGGGATTATTCTTGTCCCTGAGAAGGTGGAGGGGCTACTGCGAACCACTGCACTaGCCAGGTCGTAGGTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: TERVGRGLFLSLRRWRGYCEPLH*PGRRSC Trigger: ACATGACCTACGACCTGGCCAGTGCAGTGGTTCGCA...GTAGCCCCTCCACCTTCTCAGGGACAAGAATAATCCCCTGCCCACCCGCTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS-3UTR CCA 90 bp | TACTGGCCCACCCTTCCTAGGATTGGATACTCCAGGCCTCCCTCTTCTTCACAAAGGGCGTGGGAATACTaGCGGCCCCACGAGTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: YWPTLPRIGYSRPPSSSQRAWEY*RPHEWF Trigger: GAACCACTCGTGGGGCCGCCAGTATTCCCACGCCCT...TTGTGAAGAAGAGGGAGGCCTGGAGTATCCAATCCTAGGAAGGGTGGGCCAGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS-3UTR CCA 90 bp | AAGGAGATGGGAAGAGAGGACGCACTGGCACCACCTGCAGGGTCACTGACAGGGTGCTTGTACTTCTCCTaGTACTGTCGCCGGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KEMGREDALAPPAGSLTGCLYFS*YCRREE Trigger: CTCTTCCCGGCGACAGTACCAGGAGAAGTACAAGCA...CCCTGTCAGTGACCCTGCAGGTGGTGCCAGTGCGTCCTCTCTTCCCATCTCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS-3UTR CCA 90 bp | GGCCCACCCTTCCTAGGATTGGATACTCCAGGCCTCCCTCTTCTTCACAACAGTAATCTCCTCCCGAAGTaGCTCGCTCAGCTCCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GPPFLGLDTPGLPLLHNSNLLPK*LAQLPQ Trigger: CTGGGGGAGCTGAGCGAGCCACTTCGGGAGGAGATT...ACTGTTGTGAAGAAGAGGGAGGCCTGGAGTATCCAATCCTAGGAAGGGTGGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS-3UTR CCA 90 bp | ACAGAGCGGGTGGGCAGGGGATTATTCTTGTCCCTGAGAAGGTGGAGGGGCTACACCAGGTCCCCTGGTTaGAAGACCTCAAAACGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TERVGRGLFLSLRRWRGYTRSPG*KTSKRS Trigger: GCTCCGTTTTGAGGTCTTCCAACCAGGGGACCTGGT...GTAGCCCCTCCACCTTCTCAGGGACAAGAATAATCCCCTGCCCACCCGCTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS-3UTR CCA 90 bp | ACAGAGCGGGTGGGCAGGGGATTATTCTTGTCCCTGAGAAGGTGGAGGGGCTACCACCACCAGGTCCCCTaGTTGGAAGACCTCAAAACG | + |
|
Preference number: 4 (lower is better) Translates to: TERVGRGLFLSLRRWRGYHHQVP*LEDLKT Trigger: CGTTTTGAGGTCTTCCAACCAGGGGACCTGGTGGTG...GTAGCCCCTCCACCTTCTCAGGGACAAGAATAATCCCCTGCCCACCCGCTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS-3UTR TCA 90 bp | GTACCCAGCTACGACAAAGGAGATGGGAAGAGAGGACGCACTGGCACCACCTGCTGTCAGAGAGGACATTaGAGACGATCCAGGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VPSYDKGDGKRGRTGTTCCQRGH*RRSRVE Trigger: CTCCACCCTGGATCGTCTTCAATGTCCTCTCTGACA...GCAGGTGGTGCCAGTGCGTCCTCTCTTCCCATCTCCTTTGTCGTAGCTGGGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS-3UTR TCA 90 bp | GACCCTCCTGAGGGGGTAAGGACTGCAGGCATGAGTGACCAGCTGGACTTTAGGTGTGACTCATGGCCTTaGACAGGGCGTGGGAATACT | + |
|
Preference number: 4 (lower is better) Translates to: DPPEGVRTAGMSDQLDFRCDSWP*TGRGNT Trigger: AGTATTCCCACGCCCTGTTCAAGGCCATGAGTCACA...CCTAAAGTCCAGCTGGTCACTCATGCCTGCAGTCCTTACCCCCTCAGGAGGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS-3UTR TCA 90 bp | TCACTGACAGGGAGACAGCCGTCTAGTTACTCGGCAGTGATGGAGGCAGCAAGTGCACTGGCTTTCCACTaGGTCGAGCTCCTGTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLTGRQPSSYSAVMEAASALAFH*VELLYQ Trigger: CTGGTACAGGAGCTCGACTCAGTGGAAAGCCAGTGC...ACTTGCTGCCTCCATCACTGCCGAGTAACTAGACGGCTGTCTCCCTGTCAGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS-3UTR CCA 90 bp | TACTGGCCCACCCTTCCTAGGATTGGATACTCCAGGCCTCCCTCTTCTTCACAACAGGCACTGATGACCTaGGTGGCTGGACTGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: YWPTLPRIGYSRPPSSSQQALMT*VAGLSL Trigger: CAGGGACAGTCCAGCCACCCAGGTCATCAGTGCCTG...TTGTGAAGAAGAGGGAGGCCTGGAGTATCCAATCCTAGGAAGGGTGGGCCAGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS-3UTR GCA 90 bp | GGCCCACCCTTCCTAGGATTGGATACTCCAGGCCTCCCTCTTCTTCACAACAGTCTACTGCTTTGTGGCTaGCGAAGACCCGGAGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GPPFLGLDTPGLPLLHNSLLLCG*RRPGER Trigger: TCTCTCTCCGGGTCTTCGGCAGCCACAAAGCAGTAG...ACTGTTGTGAAGAAGAGGGAGGCCTGGAGTATCCAATCCTAGGAAGGGTGGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS-3UTR GCA 90 bp | AGGGGAACAGAGCGGGTGGGCAGGGGATTATTCTTGTCCCTGAGAAGGTGGAGGGACTTCACCCTCTCCTaGTCGATTTCTACTGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RGTERVGRGLFLSLRRWRDFTLS*SISTAL Trigger: CAAAGCAGTAGAAATCGAGCAGGAGAGGGTGAAGTC...CCTCCACCTTCTCAGGGACAAGAATAATCCCCTGCCCACCCGCTCTGTTCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS-3UTR GCA 90 bp | GTACCCAGCTACGACAAAGGAGATGGGAAGAGAGGACGCACTGGCACCACCTGCTCAGCTCCCCCAGGATaGTCTCTTCATCAAACATCT | + |
|
Preference number: 4 (lower is better) Translates to: VPSYDKGDGKRGRTGTTCSAPPG*SLHQTS Trigger: AGATGTTTGATGAAGAGAGCATCCTGGGGGAGCTGA...GCAGGTGGTGCCAGTGCGTCCTCTCTTCCCATCTCCTTTGTCGTAGCTGGGTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS-3UTR GCA 90 bp | GAGTTGTGTGGTCCTGGCCCCATGCTACAGTGTACTTCTGAAGGGGAACAGAGCCTGCTCGATTTCTACTaGTTTGTGGCTGCCGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ELCGPGPMLQCTSEGEQSLLDFY*FVAAED Trigger: GTCTTCGGCAGCCACAAAGCAGTAGAAATCGAGCAG...GCTCTGTTCCCCTTCAGAAGTACACTGTAGCATGGGGCCAGGACCACACAACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS-3UTR CCA 90 bp | TGCTGCAGATGGCATTGTGCAAGGACCACAAAGATGTTCCCCAGGCCCCTACCAGAAGACGATCCAGGGTaGAGAGTTCTCCTCCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CCRWHCARTTKMFPRPLPEDDPG*RVLLLE Trigger: TTCAAGGAGGAGAACTCTCCACCCTGGATCGTCTTC...TGGTAGGGGCCTGGGGAACATCTTTGTGGTCCTTGCACAATGCCATCTGCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS-3UTR CCA 90 bp | ACAGGGAGACAGCCGTCTAGTTACTCGGCAGTGATGGAGGCAGCAAGTACTTGTCTCAGCAGCCCGTGCTaGATGAAGTACATCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TGRQPSSYSAVMEAASTCLSSPC*MKYIFL Trigger: CAGGAAGATGTACTTCATCCAGCACGGGCTGCTGAG...ACAAGTACTTGCTGCCTCCATCACTGCCGAGTAACTAGACGGCTGTCTCCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS-3UTR CCA 90 bp | GAGTTGTGTGGTCCTGGCCCCATGCTACAGTGTACTTCTGAAGGGGAACAGAGCATGTTGGCAGAAATTTaGGGACCTCTGGGGGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: ELCGPGPMLQCTSEGEQSMLAEI*GPLGVT Trigger: AGTTACCCCCAGAGGTCCCCAAATTTCTGCCAACAT...GCTCTGTTCCCCTTCAGAAGTACACTGTAGCATGGGGCCAGGACCACACAACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS-3UTR GCA 90 bp | CTGCTGGGTCAGATGAAATTCTTCCACAACCACTTTGTCCCCACATACAGATCAAGGCATGCCTACCGGTaGCTGCTGCCCATAGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLGQMKFFHNHFVPTYRSRHAYR*LLPIAN Trigger: ATTGGCTATGGGCAGCAGGCACCGGTAGGCATGCCT...TGATCTGTATGTGGGGACAAAGTGGTTGTGGAAGAATTTCATCTGACCCAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| 3UTR CAA 72 bp | GAGCCGAGCTTACGAGCCACTAATCTGGCTGTTCTCTaGCCCACTGATCTGCTGGGTCAGATGAAATTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EPSLRATNLAVL*PTDLLGQMKFF Trigger: GAAGAATTTCATCTGACCCAGCAGATCAGTGGGCAAGAGAACAGCCAGATTAGTGGCTCGTAAGCTCGGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS-3UTR GCA 90 bp | TCAGATGAAATTCTTCCACAACCACTTTGTCCCCACATACAGATCAGAAGCAAATTGTTGACCGTCGGCTaGAGCAGCGTCCCGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SDEILPQPLCPHIQIRSKLLTVG*SSVPSC Trigger: GCAGCTCGGGACGCTGCTGCAGCCGACGGTCAACAA...TTTGCTTCTGATCTGTATGTGGGGACAAAGTGGTTGTGGAAGAATTTCATCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS-3UTR CCA 90 bp | TGCTGCAGATGGCATTGTGCAAGGACCACAAAGATGTTCCCCAGGCCCCTACCATATAATCCACAGGGATaGAGGAGATCAGATCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: CCRWHCARTTKMFPRPLPYNPQG*RRSDQP Trigger: TGGTTGATCTGATCTCCTCCATCCCTGTGGATTATA...TGGTAGGGGCCTGGGGAACATCTTTGTGGTCCTTGCACAATGCCATCTGCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR CCA 90 bp | TCAGATGAAATTCTTCCACAACCACTTTGTCCCCACATACAGATCAGAAGCAAACGGGATAGGCTGGCATaGAGGGTTCGGGCAGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SDEILPQPLCPHIQIRSKRDRLA*RVRAGG Trigger: TCCACCTGCCCGAACCCTCCATGCCAGCCTATCCCG...TTTGCTTCTGATCTGTATGTGGGGACAAAGTGGTTGTGGAAGAATTTCATCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR CCA 90 bp | TCAGATGAAATTCTTCCACAACCACTTTGTCCCCACATACAGATCAGAAGCAAAAGGGGCGTGCACCAGTaGTTCCCACAGCACTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SDEILPQPLCPHIQIRSKRGVHQ*FPQHWL Trigger: AAGCCAGTGCTGTGGGAACCACTGGTGCACGCCCCT...TTTGCTTCTGATCTGTATGTGGGGACAAAGTGGTTGTGGAAGAATTTCATCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS-3UTR GCA 90 bp | CTGCTGGGTCAGATGAAATTCTTCCACAACCACTTTGTCCCCACATACAGATCACTTCATCAAACATCTTaGCCTGGTAGCGATGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LLGQMKFFHNHFVPTYRSLHQTS*PGSDAR Trigger: ACGAGCATCGCTACCAGGGCAAGATGTTTGATGAAG...TGATCTGTATGTGGGGACAAAGTGGTTGTGGAAGAATTTCATCTGACCCAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS CCA 90 bp | GGCTCGGGCGCAGACTCCGGCACCCCACCTGAGGCCGCGCGGGCCTaGGCCGGAGCCGCAGGAGGCGTCTCGCGTGCAGGGGTCGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: GSGADSGTPPEAARA*AGAAGGVSRAGVAA Trigger: AGCGGCGACCCCTGCACGCGAGACGCCTCCTGCGGCTCCGGCCCAGGCCCGCGCGGCCTCAGGTGGGGTGCCGGAGTCTGCGCCCGAGCC 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS CCA 90 bp | AGCCTCCGAGCACCTCCTCCTGGGGGAGGGCCCAACAGAGATACCTaGGAACGCCCTGTCCGGGATAGGCTGGCATGGAGGGTTCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SLRAPPPGGGPNRDT*ERPVRDRLAWRVRA Trigger: TGCCCGAACCCTCCATGCCAGCCTATCCCGGACAGGGCGTTCCCAGGTATCTCTGTTGGGCCCTCCCCCAGGAGGAGGTGCTCGGAGGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS CCA 90 bp | AGCAGCTGCCTGCAGAGGGGCGTGCACCAGTGGTTCCCACAGCACTaGCTTTCCACTGAGTCGAGCTCCTGTACCAGGAGCCAGGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: SSCLQRGVHQWFPQH*LSTESSSCTRSQAP Trigger: CGGGGCCTGGCTCCTGGTACAGGAGCTCGACTCAGTGGAAAGCCAGTGCTGTGGGAACCACTGGTGCACGCCCCTCTGCAGGCAGCTGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS CCA 90 bp | CCCAACAGAGATACCTGGGAACGCCCTGTCCGGGATAGGCTGGCATaGAGGGTTCGGGCAGGTGGAGCAGGCAGGCGAGAAGTGGACGCC | + |
|
Preference number: 5 (lower is better) Translates to: PNRDTWERPVRDRLA*RVRAGGAGRREVDA Trigger: GGCGTCCACTTCTCGCCTGCCTGCTCCACCTGCCCGAACCCTCCATGCCAGCCTATCCCGGACAGGGCGTTCCCAGGTATCTCTGTTGGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS CCA 90 bp | GAGGGCCCAACAGAGATACCTGGGAACGCCCTGTCCGGGATAGGCTaGCATGGAGGGTTCGGGCAGGTGGAGCAGGCAGGCGAGAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: EGPTEIPGNALSGIG*HGGFGQVEQAGEKW Trigger: CCACTTCTCGCCTGCCTGCTCCACCTGCCCGAACCCTCCATGCCAGCCTATCCCGGACAGGGCGTTCCCAGGTATCTCTGTTGGGCCCTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS-3UTR CAA 90 bp | CTGCGCCTGGCAGGACCGTGGCCTGGGGACACCCTTGTTAAAGGGCTTCGAGTTGCGTTCGGATGGCCCTaGGCGCCAGCAGGATCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: LRLAGPWPGDTLVKGLRVAFGWP*APAGSR Trigger: CCGAGATCCTGCTGGCGCCAAGGGCCATCCGAACGC...AACTCGAAGCCCTTTAACAAGGGTGTCCCCAGGCCACGGTCCTGCCAGGCGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS TCA 90 bp | GCAGAGGGGCGTGCACCAGTGGTTCCCACAGCACTGGCTTTCCACTaGGTCGAGCTCCTGTACCAGGAGCCAGGCCCCGAACACCACGAG | + |
|
Preference number: 5 (lower is better) Translates to: AEGRAPVVPTALAFH*VELLYQEPGPEHHE Trigger: CTCGTGGTGTTCGGGGCCTGGCTCCTGGTACAGGAGCTCGACTCAGTGGAAAGCCAGTGCTGTGGGAACCACTGGTGCACGCCCCTCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS GCA 90 bp | GCGCTCACTTCCAGAGCCTTTACGCCTAGGAGAGCCATCCCCTGTTaGTCGCTGAGGCAGAGAGGGTTGCGAGGCAGAAAGTGGGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ALTSRAFTPRRAIPC*SLRQRGLRGRKWAA Trigger: GGCCGCCCACTTTCTGCCTCGCAACCCTCTCTGCCTCAGCGAGCAACAGGGGATGGCTCTCCTAGGCGTAAAGGCTCTGGAAGTGAGCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS GCA 90 bp | GCTATGGCCACGTTGGAGGTCACAGCAGCTGCCTGCAGAGGGGCGTaGACCAGTGGTTCCCACAGCACTGGCTTTCCACTGAGTCGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: AMATLEVTAAACRGA*TSGSHSTGFPLSRA Trigger: AGCTCGACTCAGTGGAAAGCCAGTGCTGTGGGAACCACTGGTGCACGCCCCTCTGCAGGCAGCTGCTGTGACCTCCAACGTGGCCATAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS CCA 90 bp | ATCAACCAGGAACCAGGTGCGCAGGTAACGCGTTCGGATGGCCCTTaGCGCCAGCAGGATCTCGGCACCTTCCTCCACCACGATGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: INQEPGAQVTRSDGP*RQQDLGTFLHHDAS Trigger: ACTGGCATCGTGGTGGAGGAAGGTGCCGAGATCCTGCTGGCGCCAAGGGCCATCCGAACGCGTTACCTGCGCACCTGGTTCCTGGTTGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS CCA 90 bp | CACGTTGGAGGTCACAGCAGCTGCCTGCAGAGGGGCGTGCACCAGTaGTTCCCACAGCACTGGCTTTCCACTGAGTCGAGCTCCTGTACC | + |
|
Preference number: 5 (lower is better) Translates to: HVGGHSSCLQRGVHQ*FPQHWLSTESSSCT Trigger: GGTACAGGAGCTCGACTCAGTGGAAAGCCAGTGCTGTGGGAACCACTGGTGCACGCCCCTCTGCAGGCAGCTGCTGTGACCTCCAACGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS GCA 90 bp | CCCCGAACACCACGAGCCATGTCTCTGTCGTGTTGTACCAAATGCTaGTCCATGACGCCACCGCTGCTGCCTGGACTCGGCTCAGAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: PRTPRAMSLSCCTKC*SMTPPLLPGLGSER Trigger: ACGCTCTGAGCCGAGTCCAGGCAGCAGCGGTGGCGTCATGGAGCAGCATTTGGTACAACACGACAGAGACATGGCTCGTGGTGTTCGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS GCA 90 bp | AGGCCCCGAACACCACGAGCCATGTCTCTGTCGTGTTGTACCAAATaGTGCTCCATGACGCCACCGCTGCTGCCTGGACTCGGCTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RPRTPRAMSLSCCTK*CSMTPPLLPGLGSE Trigger: CTCTGAGCCGAGTCCAGGCAGCAGCGGTGGCGTCATGGAGCAGCATTTGGTACAACACGACAGAGACATGGCTCGTGGTGTTCGGGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS CCA 90 bp | AGATCAGATCAACCAGGAACCAGGTGCGCAGGTAACGCGTTCGGATaGCCCTTGGCGCCAGCAGGATCTCGGCACCTTCCTCCACCACGA | + |
|
Preference number: 5 (lower is better) Translates to: RSDQPGTRCAGNAFG*PLAPAGSRHLPPPR Trigger: TCGTGGTGGAGGAAGGTGCCGAGATCCTGCTGGCGCCAAGGGCCATCCGAACGCGTTACCTGCGCACCTGGTTCCTGGTTGATCTGATCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS CCA 90 bp | ATCTTCCTGCCCACGGAGCCCTCACGCACCACCAGGTCCCCTGGTTaGAAGACCTCAAAACGGAGCTTGGTGAGCACTGCGGTGACGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IFLPTEPSRTTRSPG*KTSKRSLVSTAVTK Trigger: CTTCGTCACCGCAGTGCTCACCAAGCTCCGTTTTGAGGTCTTCCAACCAGGGGACCTGGTGGTGCGTGAGGGCTCCGTGGGCAGGAAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS-3UTR CAA 90 bp | AGGGGAACAGAGCGGGTGGGCAGGGGATTATTCTTGTCCCTGAGAAGGTGGAGGCTGAGGCAGAGAGGGTaGCGAGGCAGAAAGTGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: RGTERVGRGLFLSLRRWRLRQRG*RGRKWA Trigger: CGCCCACTTTCTGCCTCGCAACCCTCTCTGCCTCAG...CCTCCACCTTCTCAGGGACAAGAATAATCCCCTGCCCACCCGCTCTGTTCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
||
| CDS TCA 90 bp | CACCACGAGCCATGTCTCTGTCGTGTTGTACCAAATGCTGCTCCATaGCGCCACCGCTGCTGCCTGGACTCGGCTCAGAGCGTTTCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: HHEPCLCRVVPNAAP*RHRCCLDSAQSVSA Trigger: AGCGGAAACGCTCTGAGCCGAGTCCAGGCAGCAGCGGTGGCGTCATGGAGCAGCATTTGGTACAACACGACAGAGACATGGCTCGTGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS GCA 90 bp | ATGACGCCACCGCTGCTGCCTGGACTCGGCTCAGAGCGTTTCCGCTaGAGTATCGAATTCTTTTTGCCGATGCGCCGAAGCCGGTCCATG | + |
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Preference number: 5 (lower is better) Translates to: MTPPLLPGLGSERFR*SIEFFLPMRRSRSM Trigger: CATGGACCGGCTTCGGCGCATCGGCAAAAAGAATTCGATACTGCAGCGGAAACGCTCTGAGCCGAGTCCAGGCAGCAGCGGTGGCGTCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR CAA 90 bp | CTGCGCCTGGCAGGACCGTGGCCTGGGGACACCCTTGTTAAAGGGCTTCGAGTTATGCCAGTTCGGAAGTaGAGCACCAGATCCAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: LRLAGPWPGDTLVKGLRVMPVRK*STRSSR Trigger: CCTGCTGGATCTGGTGCTCAACTTCCGAACTGGCAT...AACTCGAAGCCCTTTAACAAGGGTGTCCCCAGGCCACGGTCCTGCCAGGCGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR CAA 90 bp | AGGGGAACAGAGCGGGTGGGCAGGGGATTATTCTTGTCCCTGAGAAGGTGGAGGTCCTCAAGCACCGCATaGAAGTGGTCCACGCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: RGTERVGRGLFLSLRRWRSSSTA*KWSTLS Trigger: GCTCAGCGTGGACCACTTCAATGCGGTGCTTGAGGA...CCTCCACCTTCTCAGGGACAAGAATAATCCCCTGCCCACCCGCTCTGTTCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR CAA 90 bp | GAGTTGTGTGGTCCTGGCCCCATGCTACAGTGTACTTCTGAAGGGGAACAGAGCACCCGGAGAGAGAACTaGTTGACCGTCGGCTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: ELCGPGPMLQCTSEGEQSTRREN*LTVGCS Trigger: GCTGCAGCCGACGGTCAACAAGTTCTCTCTCCGGGT...GCTCTGTTCCCCTTCAGAAGTACACTGTAGCATGGGGCCAGGACCACACAACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR CAA 90 bp | TACTGGCCCACCCTTCCTAGGATTGGATACTCCAGGCCTCCCTCTTCTTCACAAGAGAGCCATCCCCTGTaGCTCGCTGAGGCAGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: YWPTLPRIGYSRPPSSSQESHPL*LAEAER Trigger: CCTCTCTGCCTCAGCGAGCAACAGGGGATGGCTCTC...TTGTGAAGAAGAGGGAGGCCTGGAGTATCCAATCCTAGGAAGGGTGGGCCAGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR CAA 90 bp | CATTGTATAGCTCTGACTGGCCCCAGACTCCTAGAAATCCTCCTGCCTGACCCTACTGTCCCTGGAGGTTaGGCCAAGAGCCCAGAGGGG | + |
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Preference number: 5 (lower is better) Translates to: HCIALTGPRLLEILLPDPTVPGG*AKSPEG Trigger: CCCCTCTGGGCTCTTGGCCAAACCTCCAGGGACAGT...AGGGTCAGGCAGGAGGATTTCTAGGAGTCTGGGGCCAGTCAGAGCTATACAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR CAA 90 bp | TCACTGACAGGGAGACAGCCGTCTAGTTACTCGGCAGTGATGGAGGCAGCAAGTCACCAGGTCCCCTGGTaGGAAGACCTCAAAACGGAG | + |
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Preference number: 5 (lower is better) Translates to: SLTGRQPSSYSAVMEAASHQVPW*EDLKTE Trigger: CTCCGTTTTGAGGTCTTCCAACCAGGGGACCTGGTG...ACTTGCTGCCTCCATCACTGCCGAGTAACTAGACGGCTGTCTCCCTGTCAGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR CAA 90 bp | TGCTGCAGATGGCATTGTGCAAGGACCACAAAGATGTTCCCCAGGCCCCTACCAAAGCCCTGCGCATCATaGGGAACTCCTCAAGCACCG | + |
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Preference number: 5 (lower is better) Translates to: CCRWHCARTTKMFPRPLPKPCAS*GTPQAP Trigger: CGGTGCTTGAGGAGTTCCCAATGATGCGCAGGGCTT...TGGTAGGGGCCTGGGGAACATCTTTGTGGTCCTTGCACAATGCCATCTGCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR CAA 90 bp | CATTGTATAGCTCTGACTGGCCCCAGACTCCTAGAAATCCTCCTGCCTGACCCTAAGGCTATGGCCACGTaGGAGGTCACAGCAGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: HCIALTGPRLLEILLPDPKAMAT*EVTAAA Trigger: GGCAGCTGCTGTGACCTCCAACGTGGCCATAGCCTT...AGGGTCAGGCAGGAGGATTTCTAGGAGTCTGGGGCCAGTCAGAGCTATACAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS CCA 90 bp | GTCGTGTTGTACCAAATGCTGCTCCATGACGCCACCGCTGCTGCCTaGACTCGGCTCAGAGCGTTTCCGCTGCAGTATCGAATTCTTTTT | + |
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Preference number: 5 (lower is better) Translates to: VVLYQMLLHDATAAA*TRLRAFPLQYRILF Trigger: AAAAAGAATTCGATACTGCAGCGGAAACGCTCTGAGCCGAGTCCAGGCAGCAGCGGTGGCGTCATGGAGCAGCATTTGGTACAACACGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR CAA 90 bp | CATTGTATAGCTCTGACTGGCCCCAGACTCCTAGAAATCCTCCTGCCTGACCCTTCGATTTCTACTGCTTaGTGGCTGCCGAAGACCCGG | + |
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Preference number: 5 (lower is better) Translates to: HCIALTGPRLLEILLPDPSISTA*WLPKTR Trigger: CCGGGTCTTCGGCAGCCACAAAGCAGTAGAAATCGA...AGGGTCAGGCAGGAGGATTTCTAGGAGTCTGGGGCCAGTCAGAGCTATACAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR CAA 90 bp | TCACTGACAGGGAGACAGCCGTCTAGTTACTCGGCAGTGATGGAGGCAGCAAGTGTGTCAGAGAGGACATaGAAGACGATCCAGGGTGGA | + |
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Preference number: 5 (lower is better) Translates to: SLTGRQPSSYSAVMEAASVSERT*KTIQGG Trigger: TCCACCCTGGATCGTCTTCAATGTCCTCTCTGACAC...ACTTGCTGCCTCCATCACTGCCGAGTAACTAGACGGCTGTCTCCCTGTCAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR CAA 90 bp | TCACTGACAGGGAGACAGCCGTCTAGTTACTCGGCAGTGATGGAGGCAGCAAGTCATGTCTCTGTCGTGTaGTACCAAATGCTGCTCCAT | + |
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Preference number: 5 (lower is better) Translates to: SLTGRQPSSYSAVMEAASHVSVV*YQMLLH Trigger: ATGGAGCAGCATTTGGTACAACACGACAGAGACATG...ACTTGCTGCCTCCATCACTGCCGAGTAACTAGACGGCTGTCTCCCTGTCAGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR CAA 90 bp | CTGCTGGGTCAGATGAAATTCTTCCACAACCACTTTGTCCCCACATACAGATCATACTGCTCCACCTGCTaGTACTTCTCCTGGTACTGT | + |
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Preference number: 5 (lower is better) Translates to: LLGQMKFFHNHFVPTYRSYCSTC*YFSWYC Trigger: ACAGTACCAGGAGAAGTACAAGCAGGTGGAGCAGTA...TGATCTGTATGTGGGGACAAAGTGGTTGTGGAAGAATTTCATCTGACCCAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS-3UTR CAA 90 bp | TCGAGTTATTTCTACTTGGCAGTGGATACACAGTACCTAGCACAGTGCCTTGAAATCATTCCAATGAGGTaGAAGATGCGAACCACTGCA | + |
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Preference number: 5 (lower is better) Translates to: SSYFYLAVDTQYLAQCLEIIPMR*KMRTTA Trigger: TGCAGTGGTTCGCATCTTCAACCTCATTGGAATGAT...TTCAAGGCACTGTGCTAGGTACTGTGTATCCACTGCCAAGTAGAAATAACTCGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS CCA 72 bp | GCACCTCCTCCTGGGGGAGGGCCCAACAGAGATACCTaGGAACGCCCTGTCCGGGATAGGCTGGCATGGAGG | + |
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Preference number: 6 (lower is better) Translates to: APPPGGGPNRDT*ERPVRDRLAWR Trigger: CCTCCATGCCAGCCTATCCCGGACAGGGCGTTCCCAGGTATCTCTGTTGGGCCCTCCCCCAGGAGGAGGTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS CCA 72 bp | GATACCTGGGAACGCCCTGTCCGGGATAGGCTGGCATaGAGGGTTCGGGCAGGTGGAGCAGGCAGGCGAGAA | + |
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Preference number: 6 (lower is better) Translates to: DTWERPVRDRLA*RVRAGGAGRRE Trigger: TTCTCGCCTGCCTGCTCCACCTGCCCGAACCCTCCATGCCAGCCTATCCCGGACAGGGCGTTCCCAGGTATC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS CCA 72 bp | CCCACGGAGCCCTCACGCACCACCAGGTCCCCTGGTTaGAAGACCTCAAAACGGAGCTTGGTGAGCACTGCG | + |
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Preference number: 6 (lower is better) Translates to: PTEPSRTTRSPG*KTSKRSLVSTA Trigger: CGCAGTGCTCACCAAGCTCCGTTTTGAGGTCTTCCAACCAGGGGACCTGGTGGTGCGTGAGGGCTCCGTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS CAA 72 bp | GCCCACGGAGCCCTCACGCACCACCAGGTCCCCTGGTaGGAAGACCTCAAAACGGAGCTTGGTGAGCACTGC | + |
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Preference number: 6 (lower is better) Translates to: AHGALTHHQVPW*EDLKTELGEHC Trigger: GCAGTGCTCACCAAGCTCCGTTTTGAGGTCTTCCAACCAGGGGACCTGGTGGTGCGTGAGGGCTCCGTGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS CAA 90 bp | GATCAACCAGGAACCAGGTGCGCAGGTAACGCGTTCGGATGGCCCTaGGCGCCAGCAGGATCTCGGCACCTTCCTCCACCACGATGCCAG | + |
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Preference number: 6 (lower is better) Translates to: DQPGTRCAGNAFGWP*APAGSRHLPPPRCQ Trigger: CTGGCATCGTGGTGGAGGAAGGTGCCGAGATCCTGCTGGCGCCAAGGGCCATCCGAACGCGTTACCTGCGCACCTGGTTCCTGGTTGATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS TCA 72 bp | CCTTTACGCCTAGGAGAGCCATCCCCTGTTGCTCGCTaGGGCAGAGAGGGTTGCGAGGCAGAAAGTGGGCGG | + |
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Preference number: 6 (lower is better) Translates to: PLRLGEPSPVAR*GREGCEAESGR Trigger: CCGCCCACTTTCTGCCTCGCAACCCTCTCTGCCTCAGCGAGCAACAGGGGATGGCTCTCCTAGGCGTAAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS CAA 90 bp | CATCTTCCTGCCCACGGAGCCCTCACGCACCACCAGGTCCCCTGGTaGGAAGACCTCAAAACGGAGCTTGGTGAGCACTGCGGTGACGAA | + |
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Preference number: 6 (lower is better) Translates to: HLPAHGALTHHQVPW*EDLKTELGEHCGDE Trigger: TTCGTCACCGCAGTGCTCACCAAGCTCCGTTTTGAGGTCTTCCAACCAGGGGACCTGGTGGTGCGTGAGGGCTCCGTGGGCAGGAAGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS CAA 90 bp | ACCAGGAGCCAGGCCCCGAACACCACGAGCCATGTCTCTGTCGTGTaGTACCAAATGCTGCTCCATGACGCCACCGCTGCTGCCTGGACT | + |
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Preference number: 6 (lower is better) Translates to: TRSQAPNTTSHVSVV*YQMLLHDATAAAWT Trigger: AGTCCAGGCAGCAGCGGTGGCGTCATGGAGCAGCATTTGGTACAACACGACAGAGACATGGCTCGTGGTGTTCGGGGCCTGGCTCCTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS GCA 72 bp | CCGCTGCTGCCTGGACTCGGCTCAGAGCGTTTCCGCTaGAGTATCGAATTCTTTTTGCCGATGCGCCGAAGC | + |
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Preference number: 6 (lower is better) Translates to: PLLPGLGSERFR*SIEFFLPMRRS Trigger: GCTTCGGCGCATCGGCAAAAAGAATTCGATACTGCAGCGGAAACGCTCTGAGCCGAGTCCAGGCAGCAGCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS GCA 72 bp | TCCAGAGCCTTTACGCCTAGGAGAGCCATCCCCTGTTaGTCGCTGAGGCAGAGAGGGTTGCGAGGCAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: SRAFTPRRAIPC*SLRQRGLRGRK Trigger: CTTTCTGCCTCGCAACCCTCTCTGCCTCAGCGAGCAACAGGGGATGGCTCTCCTAGGCGTAAAGGCTCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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| CDS CAA 72 bp | CAGGCCCCGAACACCACGAGCCATGTCTCTGTCGTGTaGTACCAAATGCTGCTCCATGACGCCACCGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: QAPNTTSHVSVV*YQMLLHDATAA Trigger: AGCAGCGGTGGCGTCATGGAGCAGCATTTGGTACAACACGACAGAGACATGGCTCGTGGTGTTCGGGGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029686.4 |
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