Pregenerated sensors for HCLS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022831Ensembl transcript IDs: ENSMUST00000023531.15, ENSMUST00000164050.8
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCTCTGCTGGAGGCCAGACCTCTGAGGAGATCTTCTTGGGCAACTaGGCTGGTGCCGCTGGCTCTTCCACAGGCATGGATGGCTGCTGG | + |
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Preference number: 1 (lower is better) Translates to: LSAGGQTSEEIFLGN*AGAAGSSTGMDGCW Trigger: CCAGCAGCCATCCATGCCTGTGGAAGAGCCAGCGGCACCAGCCCAGTTGCCCAAGAAGATCTCCTCAGAGGTCTGGCCTCCAGCAGAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| 3UTR GCA 90 bp | GGCAACTGGGCTGGTGCCGCTGGCTCTTCCACAGGCATGGATGGCTaGTGGACTTCTCGGCTCATCTTTACCACAGCCTTTCGCTCCTGT | + |
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Preference number: 1 (lower is better) Translates to: GNWAGAAGSSTGMDG*WTSRLIFTTAFRSC Trigger: ACAGGAGCGAAAGGCTGTGGTAAAGATGAGCCGAGAAGTCCAGCAGCCATCCATGCCTGTGGAAGAGCCAGCGGCACCAGCCCAGTTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| 3UTR CCA 90 bp | CTTGGGCAACTGGGCTGGTGCCGCTGGCTCTTCCACAGGCATGGATaGCTGCTGGACTTCTCGGCTCATCTTTACCACAGCCTTTCGCTC | + |
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Preference number: 1 (lower is better) Translates to: LGQLGWCRWLFHRHG*LLDFSAHLYHSLSL Trigger: GAGCGAAAGGCTGTGGTAAAGATGAGCCGAGAAGTCCAGCAGCCATCCATGCCTGTGGAAGAGCCAGCGGCACCAGCCCAGTTGCCCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| 3UTR CCA 90 bp | AACTGGGCTGGTGCCGCTGGCTCTTCCACAGGCATGGATGGCTGCTaGACTTCTCGGCTCATCTTTACCACAGCCTTTCGCTCCTGTTGC | + |
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Preference number: 1 (lower is better) Translates to: NWAGAAGSSTGMDGC*TSRLIFTTAFRSCC Trigger: GCAACAGGAGCGAAAGGCTGTGGTAAAGATGAGCCGAGAAGTCCAGCAGCCATCCATGCCTGTGGAAGAGCCAGCGGCACCAGCCCAGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| 3UTR TCA 90 bp | GGTTGGCAGAGCTGGGGTGCGGCTGAAGGAGGCAGGTCTGCAAGATaGTTTCATGAGCTACCTCAGGGAAGAGTGGTCACAGAGGGACAG | + |
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Preference number: 1 (lower is better) Translates to: GWQSWGAAEGGRSAR*FHELPQGRVVTEGQ Trigger: CTGTCCCTCTGTGACCACTCTTCCCTGAGGTAGCTCATGAAATCATCTTGCAGACCTGCCTCCTTCAGCCGCACCCCAGCTCTGCCAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| 3UTR CCA 90 bp | TCTTCTTGGGCAACTGGGCTGGTGCCGCTGGCTCTTCCACAGGCATaGATGGCTGCTGGACTTCTCGGCTCATCTTTACCACAGCCTTTC | + |
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Preference number: 1 (lower is better) Translates to: SSWATGLVPLALPQA*MAAGLLGSSLPQPF Trigger: GAAAGGCTGTGGTAAAGATGAGCCGAGAAGTCCAGCAGCCATCCATGCCTGTGGAAGAGCCAGCGGCACCAGCCCAGTTGCCCAAGAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| 3UTR GCA 90 bp | AGACTGCCAGAACTTCAGGCATCTCATGATGTTCAGCCAGGTCCTTaGAGCAGTACCATGGAGTGGGAAGAGGGAGGCAGAGCAGCTTCG | + |
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Preference number: 1 (lower is better) Translates to: RLPELQASHDVQPGP*SSTMEWEEGGRAAS Trigger: CGAAGCTGCTCTGCCTCCCTCTTCCCACTCCATGGTACTGCTGCAAGGACCTGGCTGAACATCATGAGATGCCTGAAGTTCTGGCAGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| 3UTR GCA 90 bp | TGGACTTCTCGGCTCATCTTTACCACAGCCTTTCGCTCCTGTTGCTaGCTGGCCATCTGCTGTGCCTTCTCTTCTTCCTCTCGCTTCCTC | + |
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Preference number: 1 (lower is better) Translates to: WTSRLIFTTAFRSCC*LAICCAFSSSSRFL Trigger: GAGGAAGCGAGAGGAAGAAGAGAAGGCACAGCAGATGGCCAGGCAGCAACAGGAGCGAAAGGCTGTGGTAAAGATGAGCCGAGAAGTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| 3UTR CCA 90 bp | TTCAGGCATCTCATGATGTTCAGCCAGGTCCTTGCAGCAGTACCATaGAGTGGGAAGAGGGAGGCAGAGCAGCTTCGAATTCGGGAAGTC | + |
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Preference number: 1 (lower is better) Translates to: FRHLMMFSQVLAAVP*SGKREAEQLRIREV Trigger: GACTTCCCGAATTCGAAGCTGCTCTGCCTCCCTCTTCCCACTCCATGGTACTGCTGCAAGGACCTGGCTGAACATCATGAGATGCCTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| 3UTR CCA 90 bp | CTTCTCGGCTCATCTTTACCACAGCCTTTCGCTCCTGTTGCTGCCTaGCCATCTGCTGTGCCTTCTCTTCTTCCTCTCGCTTCCTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: LLGSSLPQPFAPVAA*PSAVPSLLPLASSS Trigger: AGAAGAGGAAGCGAGAGGAAGAAGAGAAGGCACAGCAGATGGCCAGGCAGCAACAGGAGCGAAAGGCTGTGGTAAAGATGAGCCGAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| 3UTR CCA 90 bp | ACTGGAAGCAGCTTCTATGGGTGTTGTCTTCTTATACGCCGTGGTTaGGGCCTCCATTTCATTGAAGCCAACAGCACTCTTATCCACTCG | + |
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Preference number: 1 (lower is better) Translates to: TGSSFYGCCLLIRRG*GLHFIEANSTLIHS Trigger: CGAGTGGATAAGAGTGCTGTTGGCTTCAATGAAATGGAGGCCCCAACCACGGCGTATAAGAAGACAACACCCATAGAAGCTGCTTCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| 3UTR TCA 90 bp | CTAAACAGAAGGGCAGTTCCAATTTGTCTGCTAAGGGAAGAAAAATaGGCAAAAGCACAACAGGGCGAATCAGGCAGCCCTGTGAGAGCC | + |
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Preference number: 1 (lower is better) Translates to: LNRRAVPICLLREEK*AKAQQGESGSPVRA Trigger: GGCTCTCACAGGGCTGCCTGATTCGCCCTGTTGTGCTTTTGCTCATTTTTCTTCCCTTAGCAGACAAATTGGAACTGCCCTTCTGTTTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| 3UTR-3UTR GCA 90 bp | GAGAGCCTCCCCTCTAGGCTGGCACCCAGGGTCGGGGCAAGGGAATCCCAGCACGTTCAGCCAGGTCCTTaGAGCAGTACCATGGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: ESLPSRLAPRVGARESQHVQPGP*SSTMEW Trigger: CCACTCCATGGTACTGCTGCAAGGACCTGGCTGAAC...GTGCTGGGATTCCCTTGCCCCGACCCTGGGTGCCAGCCTAGAGGGGAGGCTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| 3UTR-3UTR CCA 90 bp | ATCAGGCAGCCCTGTGAGAGCCTCCCCTCTAGGCTGGCACCCAGGGTCGGGGCACTTGCAGCAGTACCATaGAGTGGGAAGAGGGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: IRQPCESLPSRLAPRVGALAAVP*SGKREA Trigger: TGCCTCCCTCTTCCCACTCCATGGTACTGCTGCAAG...TGCCCCGACCCTGGGTGCCAGCCTAGAGGGGAGGCTCTCACAGGGCTGCCTGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| 3UTR-3UTR CCA 90 bp | CAACAGGGCGAATCAGGCAGCCCTGTGAGAGCCTCCCCTCTAGGCTGGCACCCAAGCAGTACCATGGAGTaGGAAGAGGGAGGCAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: QQGESGSPVRASPLGWHPSSTME*EEGGRA Trigger: TGCTCTGCCTCCCTCTTCCCACTCCATGGTACTGCT...TGGGTGCCAGCCTAGAGGGGAGGCTCTCACAGGGCTGCCTGATTCGCCCTGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| 3UTR-3UTR CCA 90 bp | GACTGCCTCGTGGGCAGAGAGGGCACAGGGTATTCCCTTCTGCTTCTCACTGGCGCCCACGGGCACCACTaGAAGCAGCTTCTATGGGTG | + |
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Preference number: 2 (lower is better) Translates to: DCLVGREGTGYSLLLLTGAHGHH*KQLLWV Trigger: CACCCATAGAAGCTGCTTCCAGTGGTGCCCGTGGGC...GCCAGTGAGAAGCAGAAGGGAATACCCTGTGCCCTCTCTGCCCACGAGGCAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| 3UTR-3UTR GCA 90 bp | TTACCACAGCCTTTCGCTCCTGTTGCTGCCTGGCCATCTGCTGTGCCTTCTCTTCAGGGACTCAAATTTTaGCTTCAGCCCACGGGCACC | + |
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Preference number: 2 (lower is better) Translates to: LPQPFAPVAAWPSAVPSLQGLKF*LQPTGT Trigger: GGTGCCCGTGGGCTGAAGGCAAAATTTGAGTCCCTG...AAGAGAAGGCACAGCAGATGGCCAGGCAGCAACAGGAGCGAAAGGCTGTGGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| 3UTR-3UTR CCA 90 bp | AGACCTCTGAGGAGATCTTCTTGGGCAACTGGGCTGGTGCCGCTGGCTCTTCCATTCTGGATTCCATATTaGCCACCAAAGCCCTTGGCA | + |
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Preference number: 2 (lower is better) Translates to: RPLRRSSWATGLVPLALPFWIPY*PPKPLA Trigger: TGCCAAGGGCTTTGGTGGCCAATATGGAATCCAGAA...TGGAAGAGCCAGCGGCACCAGCCCAGTTGCCCAAGAAGATCTCCTCAGAGGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGACTTCTCGGCTCATCTTTACCACAGCCTTTCGCTCCTGTTGCTGCCTGGCGGGCCTCCATTTCATTaGAGCCAACAGCACTCTTAT | + |
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Preference number: 2 (lower is better) Translates to: LDFSAHLYHSLSLLLLPGGPPFH*SQQHSY Trigger: ATAAGAGTGCTGTTGGCTTCAATGAAATGGAGGCCC...GCCAGGCAGCAACAGGAGCGAAAGGCTGTGGTAAAGATGAGCCGAGAAGTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCCACGGGCACCACTGGAAGCAGCTTCTATGGGTGTTGTCTTCTTATACGCCGTCGTATCCCAGGGCTaGTTTGTCCCGTTTATCCTT | + |
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Preference number: 2 (lower is better) Translates to: SPRAPLEAASMGVVFLYAVVSQG*FVPFIL Trigger: AAGGATAAACGGGACAAAGCAGCCCTGGGATACGAC...GGCGTATAAGAAGACAACACCCATAGAAGCTGCTTCCAGTGGTGCCCGTGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGCATGGATGGCTGCTGGACTTCTCGGCTCATCTTTACCACAGCCTTTCGCTTCTTCTTATACGCCGTaGTTGGGGCCTCCATTTCAT | + |
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Preference number: 2 (lower is better) Translates to: QAWMAAGLLGSSLPQPFASSYTP*LGPPFH Trigger: ATGAAATGGAGGCCCCAACCACGGCGTATAAGAAGA...AGCGAAAGGCTGTGGTAAAGATGAGCCGAGAAGTCCAGCAGCCATCCATGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| 3UTR-3UTR CCA 90 bp | TGTTGTCTTCTTATACGCCGTGGTTGGGGCCTCCATTTCATTGAAGCCAACAGCTCCACTCGGTCTTTCTaGATTCCATATTGGCCACCA | + |
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Preference number: 2 (lower is better) Translates to: CCLLIRRGWGLHFIEANSSTRSF*IPYWPP Trigger: TGGTGGCCAATATGGAATCCAGAAAGACCGAGTGGA...GCTGTTGGCTTCAATGAAATGGAGGCCCCAACCACGGCGTATAAGAAGACAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| 3UTR-3UTR CAA 90 bp | ATCAGGCAGCCCTGTGAGAGCCTCCCCTCTAGGCTGGCACCCAGGGTCGGGGCATGTTCAGCCAGGTCCTaGCAGCAGTACCATGGAGTG | + |
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Preference number: 3 (lower is better) Translates to: IRQPCESLPSRLAPRVGACSARS*QQYHGV Trigger: CACTCCATGGTACTGCTGCAAGGACCTGGCTGAACA...TGCCCCGACCCTGGGTGCCAGCCTAGAGGGGAGGCTCTCACAGGGCTGCCTGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| 3UTR-3UTR CAA 90 bp | CTGGTGCCGCTGGCTCTTCCACAGGCATGGATGGCTGCTGGACTTCTCGGCTCAAGCCTTTCGCTCCTGTaGCTGCCTGGCCATCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: LVPLALPQAWMAAGLLGSSLSLL*LPGHLL Trigger: CAGCAGATGGCCAGGCAGCAACAGGAGCGAAAGGCT...TGAGCCGAGAAGTCCAGCAGCCATCCATGCCTGTGGAAGAGCCAGCGGCACCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| 3UTR GCA 72 bp | GCCTCGTGGGCAGAGAGGGCACAGGGTATTCCCTTCTaGTTCTCACTGGCTGAGACTCTGGCGGTAGGTGAC | + |
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Preference number: 3 (lower is better) Translates to: ASWAERAQGIPF*FSLAETLAVGD Trigger: GTCACCTACCGCCAGAGTCTCAGCCAGTGAGAAGCAGAAGGGAATACCCTGTGCCCTCTCTGCCCACGAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| 3UTR CCA 72 bp | CTGGGCTGGTGCCGCTGGCTCTTCCACAGGCATGGATaGCTGCTGGACTTCTCGGCTCATCTTTACCACAGC | + |
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Preference number: 3 (lower is better) Translates to: LGWCRWLFHRHG*LLDFSAHLYHS Trigger: GCTGTGGTAAAGATGAGCCGAGAAGTCCAGCAGCCATCCATGCCTGTGGAAGAGCCAGCGGCACCAGCCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| 3UTR CCA 72 bp | GGAGGCCAGACCTCTGAGGAGATCTTCTTGGGCAACTaGGCTGGTGCCGCTGGCTCTTCCACAGGCATGGAT | + |
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Preference number: 3 (lower is better) Translates to: GGQTSEEIFLGN*AGAAGSSTGMD Trigger: ATCCATGCCTGTGGAAGAGCCAGCGGCACCAGCCCAGTTGCCCAAGAAGATCTCCTCAGAGGTCTGGCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| 3UTR CCA 72 bp | GCAACTGGGCTGGTGCCGCTGGCTCTTCCACAGGCATaGATGGCTGCTGGACTTCTCGGCTCATCTTTACCA | + |
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Preference number: 3 (lower is better) Translates to: ATGLVPLALPQA*MAAGLLGSSLP Trigger: TGGTAAAGATGAGCCGAGAAGTCCAGCAGCCATCCATGCCTGTGGAAGAGCCAGCGGCACCAGCCCAGTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| 3UTR-3UTR CAA 90 bp | AGACCTCTGAGGAGATCTTCTTGGGCAACTGGGCTGGTGCCGCTGGCTCTTCCACCAGGGACTCAAATTTaGCCTTCAGCCCACGGGCAC | + |
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Preference number: 3 (lower is better) Translates to: RPLRRSSWATGLVPLALPPGTQI*PSAHGH Trigger: GTGCCCGTGGGCTGAAGGCAAAATTTGAGTCCCTGG...TGGAAGAGCCAGCGGCACCAGCCCAGTTGCCCAAGAAGATCTCCTCAGAGGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| 3UTR GCA 72 bp | GCTGGTGCCGCTGGCTCTTCCACAGGCATGGATGGCTaGTGGACTTCTCGGCTCATCTTTACCACAGCCTTT | + |
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Preference number: 3 (lower is better) Translates to: AGAAGSSTGMDG*WTSRLIFTTAF Trigger: AAAGGCTGTGGTAAAGATGAGCCGAGAAGTCCAGCAGCCATCCATGCCTGTGGAAGAGCCAGCGGCACCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| 3UTR-3UTR CAA 90 bp | TCTTCTTGGGCAACTGGGCTGGTGCCGCTGGCTCTTCCACAGGCATGGATGGCTTTTCTGGATTCCATATaGGCCACCAAAGCCCTTGGC | + |
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Preference number: 3 (lower is better) Translates to: SSWATGLVPLALPQAWMAFLDSI*ATKALG Trigger: GCCAAGGGCTTTGGTGGCCAATATGGAATCCAGAAA...AGCCATCCATGCCTGTGGAAGAGCCAGCGGCACCAGCCCAGTTGCCCAAGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| 3UTR-3UTR CAA 90 bp | GACTGCCTCGTGGGCAGAGAGGGCACAGGGTATTCCCTTCTGCTTCTCACTGGCCAGCTTCTATGGGTGTaGTCTTCTTATACGCCGTGG | + |
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Preference number: 3 (lower is better) Translates to: DCLVGREGTGYSLLLLTGQLLWV*SSYTPW Trigger: CCACGGCGTATAAGAAGACAACACCCATAGAAGCTG...GCCAGTGAGAAGCAGAAGGGAATACCCTGTGCCCTCTCTGCCCACGAGGCAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| 3UTR TCA 72 bp | GGCGGGAGACAGACTGCCAGAACTTCAGGCATCTCATaGTGTTCAGCCAGGTCCTTGCAGCAGTACCATGGA | + |
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Preference number: 3 (lower is better) Translates to: GGRQTARTSGIS*CSARSLQQYHG Trigger: TCCATGGTACTGCTGCAAGGACCTGGCTGAACATCATGAGATGCCTGAAGTTCTGGCAGTCTGTCTCCCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| 3UTR TCA 72 bp | AGCTGGGGTGCGGCTGAAGGAGGCAGGTCTGCAAGATaGTTTCATGAGCTACCTCAGGGAAGAGTGGTCACA | + |
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Preference number: 3 (lower is better) Translates to: SWGAAEGGRSAR*FHELPQGRVVT Trigger: TGTGACCACTCTTCCCTGAGGTAGCTCATGAAATCATCTTGCAGACCTGCCTCCTTCAGCCGCACCCCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| 3UTR GCA 72 bp | GAACTTCAGGCATCTCATGATGTTCAGCCAGGTCCTTaGAGCAGTACCATGGAGTGGGAAGAGGGAGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: ELQASHDVQPGP*SSTMEWEEGGR Trigger: TCTGCCTCCCTCTTCCCACTCCATGGTACTGCTGCAAGGACCTGGCTGAACATCATGAGATGCCTGAAGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| 3UTR CCA 72 bp | CTCATGATGTTCAGCCAGGTCCTTGCAGCAGTACCATaGAGTGGGAAGAGGGAGGCAGAGCAGCTTCGAATT | + |
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Preference number: 3 (lower is better) Translates to: LMMFSQVLAAVP*SGKREAEQLRI Trigger: AATTCGAAGCTGCTCTGCCTCCCTCTTCCCACTCCATGGTACTGCTGCAAGGACCTGGCTGAACATCATGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| 3UTR CCA 72 bp | GGGACTCAAATTTTGCCTTCAGCCCACGGGCACCACTaGAAGCAGCTTCTATGGGTGTTGTCTTCTTATACG | + |
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Preference number: 3 (lower is better) Translates to: GTQILPSAHGHH*KQLLWVLSSYT Trigger: CGTATAAGAAGACAACACCCATAGAAGCTGCTTCCAGTGGTGCCCGTGGGCTGAAGGCAAAATTTGAGTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| 3UTR TCA 72 bp | AGGGCAGTTCCAATTTGTCTGCTAAGGGAAGAAAAATaGGCAAAAGCACAACAGGGCGAATCAGGCAGCCCT | + |
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Preference number: 3 (lower is better) Translates to: RAVPICLLREEK*AKAQQGESGSP Trigger: AGGGCTGCCTGATTCGCCCTGTTGTGCTTTTGCTCATTTTTCTTCCCTTAGCAGACAAATTGGAACTGCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| 3UTR TCA 72 bp | TCTTCTTATACGCCGTGGTTGGGGCCTCCATTTCATTaGAGCCAACAGCACTCTTATCCACTCGGTCTTTCT | + |
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Preference number: 3 (lower is better) Translates to: SSYTPWLGPPFH*SQQHSYPLGLS Trigger: AGAAAGACCGAGTGGATAAGAGTGCTGTTGGCTTCAATGAAATGGAGGCCCCAACCACGGCGTATAAGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| 3UTR GCA 72 bp | TTCTACCTAAAGCTCTTAAAGAGGCGGGAGACAGACTaGCAGAACTTCAGGCATCTCATGATGTTCAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: FYLKLLKRRETD*QNFRHLMMFSQ Trigger: CTGGCTGAACATCATGAGATGCCTGAAGTTCTGGCAGTCTGTCTCCCGCCTCTTTAAGAGCTTTAGGTAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| 3UTR CCA 72 bp | AGCTTCTATGGGTGTTGTCTTCTTATACGCCGTGGTTaGGGCCTCCATTTCATTGAAGCCAACAGCACTCTT | + |
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Preference number: 3 (lower is better) Translates to: SFYGCCLLIRRG*GLHFIEANSTL Trigger: AAGAGTGCTGTTGGCTTCAATGAAATGGAGGCCCCAACCACGGCGTATAAGAAGACAACACCCATAGAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| CDS-3UTR CCA 90 bp | GGCGAATCAGGCAGCCCTGTGAGAGCCTCCCCTCTAGGCTGGCACCCAGGGTCGCCTAGGGGGCAGAGCTaGGGGCTCCTCGTTGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: GESGSPVRASPLGWHPGSPRGQS*GLLVVL Trigger: GAGGACAACGAGGAGCCCCCAGCTCTGCCCCCTAGG...CGACCCTGGGTGCCAGCCTAGAGGGGAGGCTCTCACAGGGCTGCCTGATTCGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR CCA 90 bp | GGCGAATCAGGCAGCCCTGTGAGAGCCTCCCCTCTAGGCTGGCACCCAGGGTCGATGGAGACTGCCTCGTaGGCAGAGAGGGCACAGGGT | + |
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Preference number: 4 (lower is better) Translates to: GESGSPVRASPLGWHPGSMETAS*AERAQG Trigger: ACCCTGTGCCCTCTCTGCCCACGAGGCAGTCTCCAT...CGACCCTGGGTGCCAGCCTAGAGGGGAGGCTCTCACAGGGCTGCCTGATTCGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR TCA 90 bp | CAACAGGGCGAATCAGGCAGCCCTGTGAGAGCCTCCCCTCTAGGCTGGCACCCAGACTCTGGCGGTAGGTaGCTCTCTGCTGGAGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: QQGESGSPVRASPLGWHPDSGGR*LSAGGQ Trigger: CTGGCCTCCAGCAGAGAGTCACCTACCGCCAGAGTC...TGGGTGCCAGCCTAGAGGGGAGGCTCTCACAGGGCTGCCTGATTCGCCCTGTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR CCA 90 bp | CAGGGAAGAGTGGTCACAGAGGGACAGAGGGATCCCACCCCCACCCCCACCCCCAGCCCTCAATGGTCTTaGCTCCCCACCGTTGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: QGRVVTEGQRDPTPTPTPSPQWS*LPTVAP Trigger: AGGAGCAACGGTGGGGAGCCAAGACCATTGAGGGCT...GGGGGTGGGGGTGGGGGTGGGATCCCTCTGTCCCTCTGTGACCACTCTTCCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR CCA 90 bp | GAGAGCCTCCCCTCTAGGCTGGCACCCAGGGTCGGGGCAAGGGAATCCCAGCACGTCCAGAGCCCTCAATaGTCTTGGCTCCCCACCGTT | + |
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Preference number: 4 (lower is better) Translates to: ESLPSRLAPRVGARESQHVQSPQ*SWLPTV Trigger: AACGGTGGGGAGCCAAGACCATTGAGGGCTCTGGAC...GTGCTGGGATTCCCTTGCCCCGACCCTGGGTGCCAGCCTAGAGGGGAGGCTCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR CCA 90 bp | GGCGAATCAGGCAGCCCTGTGAGAGCCTCCCCTCTAGGCTGGCACCCAGGGTCGTGCCCCCAAAGCCTCTaGCGGCATCAGTCTGAGATG | + |
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Preference number: 4 (lower is better) Translates to: GESGSPVRASPLGWHPGSCPQSL*RHQSEM Trigger: CATCTCAGACTGATGCCGCCAGAGGCTTTGGGGGCA...CGACCCTGGGTGCCAGCCTAGAGGGGAGGCTCTCACAGGGCTGCCTGATTCGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR GCA 90 bp | GAGAGCCTCCCCTCTAGGCTGGCACCCAGGGTCGGGGCAAGGGAATCCCAGCACTTGGCTCCCCACCGTTaGTCCTTCTCGGAGATGTCA | + |
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Preference number: 4 (lower is better) Translates to: ESLPSRLAPRVGARESQHLAPHR*SFSEMS Trigger: TGACATCTCCGAGAAGGAGCAACGGTGGGGAGCCAA...GTGCTGGGATTCCCTTGCCCCGACCCTGGGTGCCAGCCTAGAGGGGAGGCTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR GCA 90 bp | GCAAAAGCACAACAGGGCGAATCAGGCAGCCCTGTGAGAGCCTCCCCTCTAGGCGGGCAACTGGGCTGGTaGCGCTGGCTCTTCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: AKAQQGESGSPVRASPLGGQLGW*RWLFHR Trigger: CCTGTGGAAGAGCCAGCGGCACCAGCCCAGTTGCCC...GCCTAGAGGGGAGGCTCTCACAGGGCTGCCTGATTCGCCCTGTTGTGCTTTTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR TCA 90 bp | CAGGGAAGAGTGGTCACAGAGGGACAGAGGGATCCCACCCCCACCCCCACCCCCGATGTCGTGCTCCTCTaGCACTTTGTTCCTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QGRVVTEGQRDPTPTPTPDVVLL*HFVPQL Trigger: CAGCTGAGGAACAAAGTGTCAGAGGAGCACGACATC...GGGGGTGGGGGTGGGGGTGGGATCCCTCTGTCCCTCTGTGACCACTCTTCCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR GCA 90 bp | GAGAGCCTCCCCTCTAGGCTGGCACCCAGGGTCGGGGCAAGGGAATCCCAGCACCAGGGTATTCCCTTCTaGTTCTCACTGGCTGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: ESLPSRLAPRVGARESQHQGIPF*FSLAET Trigger: AGTCTCAGCCAGTGAGAAGCAGAAGGGAATACCCTG...GTGCTGGGATTCCCTTGCCCCGACCCTGGGTGCCAGCCTAGAGGGGAGGCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR CCA 90 bp | CAACAGGGCGAATCAGGCAGCCCTGTGAGAGCCTCCCCTCTAGGCTGGCACCCAGCTCTTCCACAGGCATaGATGGCTGCTGGACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QQGESGSPVRASPLGWHPALPQA*MAAGLL Trigger: GAGAAGTCCAGCAGCCATCCATGCCTGTGGAAGAGC...TGGGTGCCAGCCTAGAGGGGAGGCTCTCACAGGGCTGCCTGATTCGCCCTGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR TCA 90 bp | GGCGAATCAGGCAGCCCTGTGAGAGCCTCCCCTCTAGGCTGGCACCCAGGGTCGGGGCCTCCATTTCATTaGAGCCAACAGCACTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: GESGSPVRASPLGWHPGSGPPFH*SQQHSY Trigger: ATAAGAGTGCTGTTGGCTTCAATGAAATGGAGGCCC...CGACCCTGGGTGCCAGCCTAGAGGGGAGGCTCTCACAGGGCTGCCTGATTCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR CCA 90 bp | GCAACTGGGCTGGTGCCGCTGGCTCTTCCACAGGCATGGATGGCTGCTGGACTTTCAGCAACATACTCGTaGCCCACGGCACTCTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ATGLVPLALPQAWMAAGLSATYS*PTALLS Trigger: GGACAAGAGTGCCGTGGGCCACGAGTATGTTGCTGA...AAGTCCAGCAGCCATCCATGCCTGTGGAAGAGCCAGCGGCACCAGCCCAGTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| CDS-3UTR CCA 90 bp | CAGGGAAGAGTGGTCACAGAGGGACAGAGGGATCCCACCCCCACCCCCACCCCCTTCTGGATTCCATATTaGCCACCAAAGCCCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QGRVVTEGQRDPTPTPTPFWIPY*PPKPLA Trigger: TGCCAAGGGCTTTGGTGGCCAATATGGAATCCAGAA...GGGGGTGGGGGTGGGGGTGGGATCCCTCTGTCCCTCTGTGACCACTCTTCCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
||
| CDS-3UTR CCA 90 bp | GAGAGCCTCCCCTCTAGGCTGGCACCCAGGGTCGGGGCAAGGGAATCCCAGCACCTTATACGCCGTGGTTaGGGCCTCCATTTCATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ESLPSRLAPRVGARESQHLIRRG*GLHFIE Trigger: TTCAATGAAATGGAGGCCCCAACCACGGCGTATAAG...GTGCTGGGATTCCCTTGCCCCGACCCTGGGTGCCAGCCTAGAGGGGAGGCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR CCA 90 bp | GAGAGCCTCCCCTCTAGGCTGGCACCCAGGGTCGGGGCAAGGGAATCCCAGCACTCTTCTTATACGCCGTaGTTGGGGCCTCCATTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ESLPSRLAPRVGARESQHSSYTP*LGPPFH Trigger: ATGAAATGGAGGCCCCAACCACGGCGTATAAGAAGA...GTGCTGGGATTCCCTTGCCCCGACCCTGGGTGCCAGCCTAGAGGGGAGGCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR GCA 90 bp | GCAAAAGCACAACAGGGCGAATCAGGCAGCCCTGTGAGAGCCTCCCCTCTAGGCCCTGGCCATCTGCTGTaGCTTCTCTTCTTCCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: AKAQQGESGSPVRASPLGPGHLL*LLFFLS Trigger: CGAGAGGAAGAAGAGAAGGCACAGCAGATGGCCAGG...GCCTAGAGGGGAGGCTCTCACAGGGCTGCCTGATTCGCCCTGTTGTGCTTTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR CCA 90 bp | AGGCGGGAGACAGACTGCCAGAACTTCAGGCATCTCATGATGTTCAGCCAGGTCCTCATAGTCAGGCTCTaGCTCCGGCTCCAGCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: RRETDCQNFRHLMMFSQVLIVRL*LRLQLG Trigger: CCCGAGCTGGAGCCGGAGCCAGAGCCTGACTATGAG...GACCTGGCTGAACATCATGAGATGCCTGAAGTTCTGGCAGTCTGTCTCCCGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR CCA 90 bp | CAGGCATCTCATGATGTTCAGCCAGGTCCTTGCAGCAGTACCATGGAGTGGGAAAAGTGGCCACGGCATTaGCCCCGCCACCAGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QASHDVQPGPCSSTMEWEKWPRH*PRHQPS Trigger: TGAAGGCTGGTGGCGGGGCCAATGCCGTGGCCACTT...TTCCCACTCCATGGTACTGCTGCAAGGACCTGGCTGAACATCATGAGATGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR CCA 90 bp | AGGCGGGAGACAGACTGCCAGAACTTCAGGCATCTCATGATGTTCAGCCAGGTCGGGAAAAGTCCAAAGTaGCCACGGCATTGGCCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RRETDCQNFRHLMMFSQVGKSPK*PRHWPR Trigger: GCGGGGCCAATGCCGTGGCCACTTTGGACTTTTCCC...GACCTGGCTGAACATCATGAGATGCCTGAAGTTCTGGCAGTCTGTCTCCCGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR CCA 90 bp | CTGGACTTCTCGGCTCATCTTTACCACAGCCTTTCGCTCCTGTTGCTGCCTGGCTCCCAGTCATCACCCTaGGTCTCCACGGAAACCGAT | + |
|
Preference number: 4 (lower is better) Translates to: LDFSAHLYHSLSLLLLPGSQSSP*VSTETD Trigger: ATCGGTTTCCGTGGAGACCCAGGGTGATGACTGGGA...GCCAGGCAGCAACAGGAGCGAAAGGCTGTGGTAAAGATGAGCCGAGAAGTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| CDS-3UTR CCA 90 bp | AGGCATGGATGGCTGCTGGACTTCTCGGCTCATCTTTACCACAGCCTTTCGCTCAGCCCTCAATGGTCTTaGCTCCCCACCGTTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RHGWLLDFSAHLYHSLSLSPQWS*LPTVAP Trigger: AGGAGCAACGGTGGGGAGCCAAGACCATTGAGGGCT...GAGCGAAAGGCTGTGGTAAAGATGAGCCGAGAAGTCCAGCAGCCATCCATGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| CDS-3UTR CCA 90 bp | GCGATTCTACCTAAAGCTCTTAAAGAGGCGGGAGACAGACTGCCAGAACTTCAGCACCTGGAGGCCTTCTaGGGTCCTAGGGGGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AILPKALKEAGDRLPELQHLEAF*GPRGQS Trigger: GCTCTGCCCCCTAGGACCCCAGAAGGCCTCCAGGTG...CTGAAGTTCTGGCAGTCTGTCTCCCGCCTCTTTAAGAGCTTTAGGTAGAATCGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| 3UTR CAA 72 bp | GCCCACGGGCACCACTGGAAGCAGCTTCTATGGGTGTaGTCTTCTTATACGCCGTGGTTGGGGCCTCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: AHGHHWKQLLWV*SSYTPWLGPPF Trigger: AAATGGAGGCCCCAACCACGGCGTATAAGAAGACAACACCCATAGAAGCTGCTTCCAGTGGTGCCCGTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| CDS-3UTR GCA 90 bp | AGCCCACGGGCACCACTGGAAGCAGCTTCTATGGGTGTTGTCTTCTTATACGCCTTGGCTCCCCACCGTTaGTCCTTCTCGGAGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SPRAPLEAASMGVVFLYALAPHR*SFSEMS Trigger: TGACATCTCCGAGAAGGAGCAACGGTGGGGAGCCAA...GGCGTATAAGAAGACAACACCCATAGAAGCTGCTTCCAGTGGTGCCCGTGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| CDS-3UTR GCA 90 bp | CTGGACTTCTCGGCTCATCTTTACCACAGCCTTTCGCTCCTGTTGCTGCCTGGCTCTCAACTCCATATTTaGCCCCAAAGCCTCTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LDFSAHLYHSLSLLLLPGSQLHI*PQSLWR Trigger: CCGCCAGAGGCTTTGGGGGCAAATATGGAGTTGAGA...GCCAGGCAGCAACAGGAGCGAAAGGCTGTGGTAAAGATGAGCCGAGAAGTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| CDS-3UTR GCA 90 bp | AGGCGGGAGACAGACTGCCAGAACTTCAGGCATCTCATGATGTTCAGCCAGGTCTGCTGCCTGGCCATCTaGTGTGCCTTCTCTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RRETDCQNFRHLMMFSQVCCLAI*CAFSSS Trigger: GGAAGAAGAGAAGGCACAGCAGATGGCCAGGCAGCA...GACCTGGCTGAACATCATGAGATGCCTGAAGTTCTGGCAGTCTGTCTCCCGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR GCA 90 bp | CATCTCATGATGTTCAGCCAGGTCCTTGCAGCAGTACCATGGAGTGGGAAGAGGGCCTTTCGCTCCTGTTaGTGCCTGGCCATCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HLMMFSQVLAAVPWSGKRAFRSC*CLAICC Trigger: ACAGCAGATGGCCAGGCAGCAACAGGAGCGAAAGGC...CCTCTTCCCACTCCATGGTACTGCTGCAAGGACCTGGCTGAACATCATGAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR CCA 90 bp | AGGCGGGAGACAGACTGCCAGAACTTCAGGCATCTCATGATGTTCAGCCAGGTCTCCCAGTCATCACCCTaGGTCTCCACGGAAACCGAT | + |
|
Preference number: 4 (lower is better) Translates to: RRETDCQNFRHLMMFSQVSQSSP*VSTETD Trigger: ATCGGTTTCCGTGGAGACCCAGGGTGATGACTGGGA...GACCTGGCTGAACATCATGAGATGCCTGAAGTTCTGGCAGTCTGTCTCCCGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR CCA 90 bp | ACAGACTGCCAGAACTTCAGGCATCTCATGATGTTCAGCCAGGTCCTTGCAGCAGCCCACGGGCACCACTaGAAGCAGCTTCTATGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TDCQNFRHLMMFSQVLAAAHGHH*KQLLWV Trigger: CACCCATAGAAGCTGCTTCCAGTGGTGCCCGTGGGC...TGCTGCAAGGACCTGGCTGAACATCATGAGATGCCTGAAGTTCTGGCAGTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR CCA 90 bp | AGGCGGGAGACAGACTGCCAGAACTTCAGGCATCTCATGATGTTCAGCCAGGTCTTCCACAGGCATGGATaGCTGCTGGACTTCTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RRETDCQNFRHLMMFSQVFHRHG*LLDFSA Trigger: AGCCGAGAAGTCCAGCAGCCATCCATGCCTGTGGAA...GACCTGGCTGAACATCATGAGATGCCTGAAGTTCTGGCAGTCTGTCTCCCGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR CCA 90 bp | ACAGACTGCCAGAACTTCAGGCATCTCATGATGTTCAGCCAGGTCCTTGCAGCAGGCTCTTCCACCACCTaGAGGCCTTCTGGGGTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: TDCQNFRHLMMFSQVLAAGSSTT*RPSGVL Trigger: TAGGACCCCAGAAGGCCTCCAGGTGGTGGAAGAGCC...TGCTGCAAGGACCTGGCTGAACATCATGAGATGCCTGAAGTTCTGGCAGTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR TCA 90 bp | GCATGGATGGCTGCTGGACTTCTCGGCTCATCTTTACCACAGCCTTTCGCTCCTGATGTCGTGCTCCTCTaGCACTTTGTTCCTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AWMAAGLLGSSLPQPFAPDVVLL*HFVPQL Trigger: CAGCTGAGGAACAAAGTGTCAGAGGAGCACGACATC...AGGAGCGAAAGGCTGTGGTAAAGATGAGCCGAGAAGTCCAGCAGCCATCCATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| CDS-3UTR GCA 90 bp | CAGGCATCTCATGATGTTCAGCCAGGTCCTTGCAGCAGTACCATGGAGTGGGAATGGTGGATGTTGATGTaGTCTGTGCGTCCAGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QASHDVQPGPCSSTMEWEWWMLM*SVRPEP Trigger: GGGCTCTGGACGCACAGAGCACATCAACATCCACCA...TTCCCACTCCATGGTACTGCTGCAAGGACCTGGCTGAACATCATGAGATGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR CCA 90 bp | CATCTCATGATGTTCAGCCAGGTCCTTGCAGCAGTACCATGGAGTGGGAAGAGGTCAGCAACATACTCGTaGCCCACGGCACTCTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HLMMFSQVLAAVPWSGKRSATYS*PTALLS Trigger: GGACAAGAGTGCCGTGGGCCACGAGTATGTTGCTGA...CCTCTTCCCACTCCATGGTACTGCTGCAAGGACCTGGCTGAACATCATGAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR CCA 90 bp | AGCAGCTTCTATGGGTGTTGTCTTCTTATACGCCGTGGTTGGGGCCTCCATTTCTGCCCCCAAAGCCTCTaGCGGCATCAGTCTGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SSFYGCCLLIRRGWGLHFCPQSL*RHQSEM Trigger: CATCTCAGACTGATGCCGCCAGAGGCTTTGGGGGCA...GAAATGGAGGCCCCAACCACGGCGTATAAGAAGACAACACCCATAGAAGCTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| CDS-3UTR CCA 90 bp | CATCTCATGATGTTCAGCCAGGTCCTTGCAGCAGTACCATGGAGTGGGAAGAGGGTCAGGCTCTGTCTCTaGCTCTGGCTCATAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HLMMFSQVLAAVPWSGKRVRLCL*LWLIVR Trigger: CCTGACTATGAGCCAGAGCCAGAGACAGAGCCTGAC...CCTCTTCCCACTCCATGGTACTGCTGCAAGGACCTGGCTGAACATCATGAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| 3UTR CAA 72 bp | TTCTCGGCTCATCTTTACCACAGCCTTTCGCTCCTGTaGCTGCCTGGCCATCTGCTGTGCCTTCTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FSAHLYHSLSLL*LPGHLLCLLFF Trigger: GAAGAAGAGAAGGCACAGCAGATGGCCAGGCAGCAACAGGAGCGAAAGGCTGTGGTAAAGATGAGCCGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| CDS-3UTR TCA 90 bp | CAAGATGATTTCATGAGCTACCTCAGGGAAGAGTGGTCACAGAGGGACAGAGGGTGGAGGCCAGACCTCTaGGGAGATCTTCTTGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QDDFMSYLREEWSQRDRGWRPDL*GDLLGQ Trigger: TTGCCCAAGAAGATCTCCTCAGAGGTCTGGCCTCCA...CCCTCTGTCCCTCTGTGACCACTCTTCCCTGAGGTAGCTCATGAAATCATCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR GCA 90 bp | TGTTGTCTTCTTATACGCCGTGGTTGGGGCCTCCATTTCATTGAAGCCAACAGCGCCATAGCCATGGGATaGCTTAGGCCCCGATTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CCLLIRRGWGLHFIEANSAIAMG*LRPRFQ Trigger: CTGGAATCGGGGCCTAAGGCATCCCATGGCTATGGC...GCTGTTGGCTTCAATGAAATGGAGGCCCCAACCACGGCGTATAAGAAGACAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| CDS-3UTR CCA 90 bp | ACAGACTGCCAGAACTTCAGGCATCTCATGATGTTCAGCCAGGTCCTTGCAGCACTCTGTCTCTGGCTCTaGCTCATAGTCAGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TDCQNFRHLMMFSQVLAALCLWL*LIVRLW Trigger: CCAGAGCCTGACTATGAGCCAGAGCCAGAGACAGAG...TGCTGCAAGGACCTGGCTGAACATCATGAGATGCCTGAAGTTCTGGCAGTCTGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR GCA 90 bp | ATTCTACCTAAAGCTCTTAAAGAGGCGGGAGACAGACTGCCAGAACTTCAGGCAGCCATAGCCATGGGATaGCTTAGGCCCCGATTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ILPKALKEAGDRLPELQAAIAMG*LRPRFQ Trigger: CTGGAATCGGGGCCTAAGGCATCCCATGGCTATGGC...TGCCTGAAGTTCTGGCAGTCTGTCTCCCGCCTCTTTAAGAGCTTTAGGTAGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR GCA 90 bp | GAGGCAGGTCTGCAAGATGATTTCATGAGCTACCTCAGGGAAGAGTGGTCACAGTCTCAACTCCATATTTaGCCCCAAAGCCTCTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: EAGLQDDFMSYLREEWSQSQLHI*PQSLWR Trigger: CCGCCAGAGGCTTTGGGGGCAAATATGGAGTTGAGA...CTGTGACCACTCTTCCCTGAGGTAGCTCATGAAATCATCTTGCAGACCTGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR GCA 90 bp | CAGGCATCTCATGATGTTCAGCCAGGTCCTTGCAGCAGTACCATGGAGTGGGAAGTCGTATCCCAGGGCTaGTTTGTCCCGTTTATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QASHDVQPGPCSSTMEWEVVSQG*FVPFIL Trigger: AAGGATAAACGGGACAAAGCAGCCCTGGGATACGAC...TTCCCACTCCATGGTACTGCTGCAAGGACCTGGCTGAACATCATGAGATGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR GCA 90 bp | GAGGCAGGTCTGCAAGATGATTTCATGAGCTACCTCAGGGAAGAGTGGTCACAGCTCATAGTCTCCCTCTaGATCCTCATCCTGCCGATC | + |
|
Preference number: 4 (lower is better) Translates to: EAGLQDDFMSYLREEWSQLIVSL*ILILPI Trigger: GATCGGCAGGATGAGGATGCAGAGGGAGACTATGAG...CTGTGACCACTCTTCCCTGAGGTAGCTCATGAAATCATCTTGCAGACCTGCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
||
| CDS-3UTR GCA 90 bp | AGCAGCTTCTATGGGTGTTGTCTTCTTATACGCCGTGGTTGGGGCCTCCATTTCGAGAGTAATCTTGTCTaGCCGGTCCCTCTCAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSFYGCCLLIRRGWGLHFESNLV*PVPLNS Trigger: GGAGTTGAGAGGGACCGGGCAGACAAGATTACTCTC...GAAATGGAGGCCCCAACCACGGCGTATAAGAAGACAACACCCATAGAAGCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCATGGATGGCTGCTGGACTTCTCGGCTCATCTTTACCACAGCCTTTCGCTTTGTTCCTCAGCTGGTaGATGTTGATGTGCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QAWMAAGLLGSSLPQPFALFLSW*MLMCSV Trigger: CACAGAGCACATCAACATCCACCAGCTGAGGAACAA...AGCGAAAGGCTGTGGTAAAGATGAGCCGAGAAGTCCAGCAGCCATCCATGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
||
| CDS-3UTR CCA 90 bp | AGGCGGGAGACAGACTGCCAGAACTTCAGGCATCTCATGATGTTCAGCCAGGTCTCCACTCGGTCTTTCTaGATTCCATATTGGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: RRETDCQNFRHLMMFSQVSTRSF*IPYWPP Trigger: TGGTGGCCAATATGGAATCCAGAAAGACCGAGTGGA...GACCTGGCTGAACATCATGAGATGCCTGAAGTTCTGGCAGTCTGTCTCCCGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
||
| CDS-3UTR CCA 90 bp | CAAGATGATTTCATGAGCTACCTCAGGGAAGAGTGGTCACAGAGGGACAGAGGGGGCATGGATGGCTGCTaGACTTCTCGGCTCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QDDFMSYLREEWSQRDRGGMDGC*TSRLIF Trigger: AAAGATGAGCCGAGAAGTCCAGCAGCCATCCATGCC...CCCTCTGTCCCTCTGTGACCACTCTTCCCTGAGGTAGCTCATGAAATCATCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
||
| CDS-3UTR CCA 90 bp | ATTCTACCTAAAGCTCTTAAAGAGGCGGGAGACAGACTGCCAGAACTTCAGGCACTGAGGAGATCTTCTTaGGCAACTGGGCTGGTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ILPKALKEAGDRLPELQALRRSS*ATGLVP Trigger: CGGCACCAGCCCAGTTGCCCAAGAAGATCTCCTCAG...TGCCTGAAGTTCTGGCAGTCTGTCTCCCGCCTCTTTAAGAGCTTTAGGTAGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
||
| CDS-3UTR GCA 90 bp | CCTTCAGCCCACGGGCACCACTGGAAGCAGCTTCTATGGGTGTTGTCTTCTTATGAAACCGATACATCATaGCCCACTACAGACTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PSAHGHHWKQLLWVLSSYETDTS*PTTDFH Trigger: GTGGAAGTCTGTAGTGGGGCATGATGTATCGGTTTC...ATAAGAAGACAACACCCATAGAAGCTGCTTCCAGTGGTGCCCGTGGGCTGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
||
| CDS-3UTR GCA 90 bp | ATTCTACCTAAAGCTCTTAAAGAGGCGGGAGACAGACTGCCAGAACTTCAGGCACAGGGACTCAAATTTTaGCTTCAGCCCACGGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: ILPKALKEAGDRLPELQAQGLKF*LQPTGT Trigger: GGTGCCCGTGGGCTGAAGGCAAAATTTGAGTCCCTG...TGCCTGAAGTTCTGGCAGTCTGTCTCCCGCCTCTTTAAGAGCTTTAGGTAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
||
| CDS-3UTR CCA 90 bp | AGGCATCTCATGATGTTCAGCCAGGTCCTTGCAGCAGTACCATGGAGTGGGAAGTTGTTCCTCAGCTGGTaGATGTTGATGTGCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RHLMMFSQVLAAVPWSGKLFLSW*MLMCSV Trigger: CACAGAGCACATCAACATCCACCAGCTGAGGAACAA...CTTCCCACTCCATGGTACTGCTGCAAGGACCTGGCTGAACATCATGAGATGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR GCA 90 bp | ACAGACTGCCAGAACTTCAGGCATCTCATGATGTTCAGCCAGGTCCTTGCAGCAGAAACCGATACATCATaGCCCACTACAGACTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: TDCQNFRHLMMFSQVLAAETDTS*PTTDFH Trigger: GTGGAAGTCTGTAGTGGGGCATGATGTATCGGTTTC...TGCTGCAAGGACCTGGCTGAACATCATGAGATGCCTGAAGTTCTGGCAGTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR CCA 90 bp | GCACCACTGGAAGCAGCTTCTATGGGTGTTGTCTTCTTATACGCCGTGGTTGGGACTTTGTTCCTCAGCTaGTGGATGTTGATGTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: APLEAASMGVVFLYAVVGTLFLS*WMLMCS Trigger: AGAGCACATCAACATCCACCAGCTGAGGAACAAAGT...CCCAACCACGGCGTATAAGAAGACAACACCCATAGAAGCTGCTTCCAGTGGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| CDS-3UTR CCA 90 bp | ACAGACTGCCAGAACTTCAGGCATCTCATGATGTTCAGCCAGGTCCTTGCAGCAACTTTGTTCCTCAGCTaGTGGATGTTGATGTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: TDCQNFRHLMMFSQVLAATLFLS*WMLMCS Trigger: AGAGCACATCAACATCCACCAGCTGAGGAACAAAGT...TGCTGCAAGGACCTGGCTGAACATCATGAGATGCCTGAAGTTCTGGCAGTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR GCA 90 bp | GCGATTCTACCTAAAGCTCTTAAAGAGGCGGGAGACAGACTGCCAGAACTTCAGGAGCTTGACATAGTTTaGAGGGAAAAGTCCAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: AILPKALKEAGDRLPELQELDIV*REKSKV Trigger: CACTTTGGACTTTTCCCTGCAAACTATGTCAAGCTC...CTGAAGTTCTGGCAGTCTGTCTCCCGCCTCTTTAAGAGCTTTAGGTAGAATCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR CAA 90 bp | GGCGAATCAGGCAGCCCTGTGAGAGCCTCCCCTCTAGGCTGGCACCCAGGGTCGCTCTCAACTCCATATTaGCCCCCAAAGCCTCTGGCG | + |
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Preference number: 5 (lower is better) Translates to: GESGSPVRASPLGWHPGSLSTPY*PPKPLA Trigger: CGCCAGAGGCTTTGGGGGCAAATATGGAGTTGAGAG...CGACCCTGGGTGCCAGCCTAGAGGGGAGGCTCTCACAGGGCTGCCTGATTCGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR CAA 90 bp | GCAAAAGCACAACAGGGCGAATCAGGCAGCCCTGTGAGAGCCTCCCCTCTAGGCAAAGTGGCCACGGCATaGGCCCCGCCACCAGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: AKAQQGESGSPVRASPLGKVATA*APPPAF Trigger: GAAGGCTGGTGGCGGGGCCAATGCCGTGGCCACTTT...GCCTAGAGGGGAGGCTCTCACAGGGCTGCCTGATTCGCCCTGTTGTGCTTTTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR CAA 90 bp | GCAACTGGGCTGGTGCCGCTGGCTCTTCCACAGGCATGGATGGCTGCTGGACTTCTTGGCTCCCCACCGTaGCTCCTTCTCGGAGATGTC | + |
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Preference number: 5 (lower is better) Translates to: ATGLVPLALPQAWMAAGLLGSPP*LLLGDV Trigger: GACATCTCCGAGAAGGAGCAACGGTGGGGAGCCAAG...AAGTCCAGCAGCCATCCATGCCTGTGGAAGAGCCAGCGGCACCAGCCCAGTTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| CDS-3UTR CAA 90 bp | GAGAGCCTCCCCTCTAGGCTGGCACCCAGGGTCGGGGCAAGGGAATCCCAGCACTATCCCAGGGCTGCTTaGTCCCGTTTATCCTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: ESLPSRLAPRVGARESQHYPRAA*SRLSFS Trigger: AGAGAAGGATAAACGGGACAAAGCAGCCCTGGGATA...GTGCTGGGATTCCCTTGCCCCGACCCTGGGTGCCAGCCTAGAGGGGAGGCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS CCA 90 bp | GGGCAGAGCTGGGGGCTCCTCGTTGTCCTCCAAGTGATTCTGCAATaGAGACTGCCTCGTGGGCAGAGAGGGCACAGGGTATTCCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: GQSWGLLVVLQVILQ*RLPRGQRGHRVFPS Trigger: AGAAGGGAATACCCTGTGCCCTCTCTGCCCACGAGGCAGTCTCCATTGCAGAATCACTTGGAGGACAACGAGGAGCCCCCAGCTCTGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS CCA 90 bp | CTCATAGTCAGGCTCTGTCTCTGGCTCTGGCTCATAGTCAGGCTCTaGCTCCGGCTCCAGCTCGGGTGCTGCTTCGTACACTGGCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: LIVRLCLWLWLIVRL*LRLQLGCCFVHWLF Trigger: GAAGAGCCAGTGTACGAAGCAGCACCCGAGCTGGAGCCGGAGCCAGAGCCTGACTATGAGCCAGAGCCAGAGACAGAGCCTGACTATGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS GCA 90 bp | ATGGAGACTGCCTCGTGGGCAGAGAGGGCACAGGGTATTCCCTTCTaGTTCTCACTGGCTGAGACTCTGGCGGTAGGTGACTCTCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: METASWAERAQGIPF*FSLAETLAVGDSLL Trigger: CAGCAGAGAGTCACCTACCGCCAGAGTCTCAGCCAGTGAGAAGCAGAAGGGAATACCCTGTGCCCTCTCTGCCCACGAGGCAGTCTCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR CAA 90 bp | CAACAGGGCGAATCAGGCAGCCCTGTGAGAGCCTCCCCTCTAGGCTGGCACCCATTTCTGGATTCCATATaGGCCACCAAAGCCCTTGGC | + |
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Preference number: 5 (lower is better) Translates to: QQGESGSPVRASPLGWHPFLDSI*ATKALG Trigger: GCCAAGGGCTTTGGTGGCCAATATGGAATCCAGAAA...TGGGTGCCAGCCTAGAGGGGAGGCTCTCACAGGGCTGCCTGATTCGCCCTGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR CAA 90 bp | AGACCTCTGAGGAGATCTTCTTGGGCAACTGGGCTGGTGCCGCTGGCTCTTCCACTCTCAACTCCATATTaGCCCCCAAAGCCTCTGGCG | + |
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Preference number: 5 (lower is better) Translates to: RPLRRSSWATGLVPLALPLSTPY*PPKPLA Trigger: CGCCAGAGGCTTTGGGGGCAAATATGGAGTTGAGAG...TGGAAGAGCCAGCGGCACCAGCCCAGTTGCCCAAGAAGATCTCCTCAGAGGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| CDS-3UTR CAA 90 bp | AGGCGGGAGACAGACTGCCAGAACTTCAGGCATCTCATGATGTTCAGCCAGGTCAGCCTTTCGCTCCTGTaGCTGCCTGGCCATCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: RRETDCQNFRHLMMFSQVSLSLL*LPGHLL Trigger: CAGCAGATGGCCAGGCAGCAACAGGAGCGAAAGGCT...GACCTGGCTGAACATCATGAGATGCCTGAAGTTCTGGCAGTCTGTCTCCCGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS GCA 90 bp | AGCCCACCGCTGACTTGTCTGCCCGGTCCCTCTCAACTCCATATTTaGCCCCAAAGCCTCTGGCGGCATCAGTCTGAGATGAGTGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: SPPLTCLPGPSQLHI*PQSLWRHQSEMSVS Trigger: AGAAACACTCATCTCAGACTGATGCCGCCAGAGGCTTTGGGGGCAAATATGGAGTTGAGAGGGACCGGGCAGACAAGTCAGCGGTGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR CAA 90 bp | CATCTCATGATGTTCAGCCAGGTCCTTGCAGCAGTACCATGGAGTGGGAAGAGGCTTGGCTCCCCACCGTaGCTCCTTCTCGGAGATGTC | + |
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Preference number: 5 (lower is better) Translates to: HLMMFSQVLAAVPWSGKRLGSPP*LLLGDV Trigger: GACATCTCCGAGAAGGAGCAACGGTGGGGAGCCAAG...CCTCTTCCCACTCCATGGTACTGCTGCAAGGACCTGGCTGAACATCATGAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS GCA 90 bp | TGCTCTGTGCGTCCAGAGCCCTCAATGGTCTTGGCTCCCCACCGTTaGTCCTTCTCGGAGATGTCATTCACAAAGTCAGGGTCTGTATCC | + |
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Preference number: 5 (lower is better) Translates to: CSVRPEPSMVLAPHR*SFSEMSFTKSGSVS Trigger: GGATACAGACCCTGACTTTGTGAATGACATCTCCGAGAAGGAGCAACGGTGGGGAGCCAAGACCATTGAGGGCTCTGGACGCACAGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023531.15 ENSMUST00000164050.8 |
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| CDS-3UTR CAA 90 bp | GCATGGATGGCTGCTGGACTTCTCGGCTCATCTTTACCACAGCCTTTCGCTCCTCTCAGCTGGTGGATGTaGATGTGCTCTGTGCGTCCA | + |
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Preference number: 5 (lower is better) Translates to: AWMAAGLLGSSLPQPFAPLSWWM*MCSVRP Trigger: TGGACGCACAGAGCACATCAACATCCACCAGCTGAG...AGGAGCGAAAGGCTGTGGTAAAGATGAGCCGAGAAGTCCAGCAGCCATCCATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164050.8 |
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| CDS TCA 90 bp | AGGCCCCGATTCCAGCTCCTTCTTCTTGAGGATGTCGTGCTCCTCTaGCACTTTGTTCCTCAGCTGGTGGATGTTGATGTGCTCTGTGCG | + |
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Preference number: 5 (lower is better) Translates to: RPRFQLLLLEDVVLL*HFVPQLVDVDVLCA Trigger: CGCACAGAGCACATCAACATCCACCAGCTGAGGAACAAAGTGTCAGAGGAGCACGACATCCTCAAGAAGAAGGAGCTGGAATCGGGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023531.15 ENSMUST00000164050.8 |
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| CDS-3UTR CAA 90 bp | CAAGATGATTTCATGAGCTACCTCAGGGAAGAGTGGTCACAGAGGGACAGAGGGCCAGGGACTCAAATTTaGCCTTCAGCCCACGGGCAC | + |
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Preference number: 5 (lower is better) Translates to: QDDFMSYLREEWSQRDRGPGTQI*PSAHGH Trigger: GTGCCCGTGGGCTGAAGGCAAAATTTGAGTCCCTGG...CCCTCTGTCCCTCTGTGACCACTCTTCCCTGAGGTAGCTCATGAAATCATCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS TCA 90 bp | AACTCCATATTTGCCCCCAAAGCCTCTGGCGGCATCAGTCTGAGATaGGTGTTTCTCCACATCAGCAACATACTCGTGGCCCACGGCACT | + |
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Preference number: 5 (lower is better) Translates to: NSIFAPKASGGISLR*VFLHISNILVAHGT Trigger: AGTGCCGTGGGCCACGAGTATGTTGCTGATGTGGAGAAACACTCATCTCAGACTGATGCCGCCAGAGGCTTTGGGGGCAAATATGGAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023531.15 ENSMUST00000164050.8 |
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| CDS TCA 90 bp | CTCTCAACTCCATATTTGCCCCCAAAGCCTCTGGCGGCATCAGTCTaGGATGAGTGTTTCTCCACATCAGCAACATACTCGTGGCCCACG | + |
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Preference number: 5 (lower is better) Translates to: LSTPYLPPKPLAASV*DECFSTSATYSWPT Trigger: CGTGGGCCACGAGTATGTTGCTGATGTGGAGAAACACTCATCTCAGACTGATGCCGCCAGAGGCTTTGGGGGCAAATATGGAGTTGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023531.15 ENSMUST00000164050.8 |
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| CDS CCA 90 bp | TGTCTGCCCGGTCCCTCTCAACTCCATATTTGCCCCCAAAGCCTCTaGCGGCATCAGTCTGAGATGAGTGTTTCTCCACATCAGCAACAT | + |
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Preference number: 5 (lower is better) Translates to: CLPGPSQLHICPQSL*RHQSEMSVSPHQQH Trigger: ATGTTGCTGATGTGGAGAAACACTCATCTCAGACTGATGCCGCCAGAGGCTTTGGGGGCAAATATGGAGTTGAGAGGGACCGGGCAGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023531.15 ENSMUST00000164050.8 |
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| CDS-3UTR CAA 90 bp | ACAGACTGCCAGAACTTCAGGCATCTCATGATGTTCAGCCAGGTCCTTGCAGCACTCAGCTGGTGGATGTaGATGTGCTCTGTGCGTCCA | + |
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Preference number: 5 (lower is better) Translates to: TDCQNFRHLMMFSQVLAALSWWM*MCSVRP Trigger: TGGACGCACAGAGCACATCAACATCCACCAGCTGAG...TGCTGCAAGGACCTGGCTGAACATCATGAGATGCCTGAAGTTCTGGCAGTCTGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR CAA 90 bp | AGGCATCTCATGATGTTCAGCCAGGTCCTTGCAGCAGTACCATGGAGTGGGAAGTGCTCCTCTGACACTTaGTTCCTCAGCTGGTGGATG | + |
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Preference number: 5 (lower is better) Translates to: RHLMMFSQVLAAVPWSGKCSSDT*FLSWWM Trigger: CATCCACCAGCTGAGGAACAAAGTGTCAGAGGAGCA...CTTCCCACTCCATGGTACTGCTGCAAGGACCTGGCTGAACATCATGAGATGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR CAA 90 bp | CATCTCATGATGTTCAGCCAGGTCCTTGCAGCAGTACCATGGAGTGGGAAGAGGCAGCTTCTATGGGTGTaGTCTTCTTATACGCCGTGG | + |
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Preference number: 5 (lower is better) Translates to: HLMMFSQVLAAVPWSGKRQLLWV*SSYTPW Trigger: CCACGGCGTATAAGAAGACAACACCCATAGAAGCTG...CCTCTTCCCACTCCATGGTACTGCTGCAAGGACCTGGCTGAACATCATGAGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS-3UTR CAA 90 bp | ATTCTACCTAAAGCTCTTAAAGAGGCGGGAGACAGACTGCCAGAACTTCAGGCATCTGAGGAGATCTTCTaGGGCAACTGGGCTGGTGCC | + |
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Preference number: 5 (lower is better) Translates to: ILPKALKEAGDRLPELQASEEIF*GNWAGA Trigger: GGCACCAGCCCAGTTGCCCAAGAAGATCTCCTCAGA...TGCCTGAAGTTCTGGCAGTCTGTCTCCCGCCTCTTTAAGAGCTTTAGGTAGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS CCA 72 bp | TCGGGTGCTGCTTCGTACACTGGCTCTTCCACCACCTaGAGGCCTTCTGGGGTCCTAGGGGGCAGAGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: SGAASYTGSSTT*RPSGVLGGRAG Trigger: CCCAGCTCTGCCCCCTAGGACCCCAGAAGGCCTCCAGGTGGTGGAAGAGCCAGTGTACGAAGCAGCACCCGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS GCA 72 bp | ATAGTCAGGCTCTGGCTCCGGCTCCAGCTCGGGTGCTaGTTCGTACACTGGCTCTTCCACCACCTGGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: IVRLWLRLQLGC*FVHWLFHHLEA Trigger: GGCCTCCAGGTGGTGGAAGAGCCAGTGTACGAAGCAGCACCCGAGCTGGAGCCGGAGCCAGAGCCTGACTAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS GCA 72 bp | CTCATAGTCAGGCTCTGGCTCCGGCTCCAGCTCGGGTaGTGCTTCGTACACTGGCTCTTCCACCACCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: LIVRLWLRLQLG*CFVHWLFHHLE Trigger: CTCCAGGTGGTGGAAGAGCCAGTGTACGAAGCAGCACCCGAGCTGGAGCCGGAGCCAGAGCCTGACTATGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS CCA 72 bp | TGGGGGCTCCTCGTTGTCCTCCAAGTGATTCTGCAATaGAGACTGCCTCGTGGGCAGAGAGGGCACAGGGTA | + |
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Preference number: 6 (lower is better) Translates to: WGLLVVLQVILQ*RLPRGQRGHRV Trigger: TACCCTGTGCCCTCTCTGCCCACGAGGCAGTCTCCATTGCAGAATCACTTGGAGGACAACGAGGAGCCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS CCA 72 bp | CCCAACATCCTCATAGTCAGGCTCTGTCTCTGGCTCTaGCTCATAGTCAGGCTCTGGCTCCGGCTCCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: PNILIVRLCLWL*LIVRLWLRLQL Trigger: GAGCTGGAGCCGGAGCCAGAGCCTGACTATGAGCCAGAGCCAGAGACAGAGCCTGACTATGAGGATGTTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS GCA 72 bp | CGTCCAGAGCCCTCAATGGTCTTGGCTCCCCACCGTTaGTCCTTCTCGGAGATGTCATTCACAAAGTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: RPEPSMVLAPHR*SFSEMSFTKSG Trigger: CCCTGACTTTGTGAATGACATCTCCGAGAAGGAGCAACGGTGGGGAGCCAAGACCATTGAGGGCTCTGGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023531.15 ENSMUST00000164050.8 |
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| CDS GCA 72 bp | CTGACTTGTCTGCCCGGTCCCTCTCAACTCCATATTTaGCCCCAAAGCCTCTGGCGGCATCAGTCTGAGATG | + |
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Preference number: 6 (lower is better) Translates to: LTCLPGPSQLHI*PQSLWRHQSEM Trigger: CATCTCAGACTGATGCCGCCAGAGGCTTTGGGGGCAAATATGGAGTTGAGAGGGACCGGGCAGACAAGTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS CAA 90 bp | GTGCTCTGTGCGTCCAGAGCCCTCAATGGTCTTGGCTCCCCACCGTaGCTCCTTCTCGGAGATGTCATTCACAAAGTCAGGGTCTGTATC | + |
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Preference number: 6 (lower is better) Translates to: VLCASRALNGLGSPP*LLLGDVIHKVRVCI Trigger: GATACAGACCCTGACTTTGTGAATGACATCTCCGAGAAGGAGCAACGGTGGGGAGCCAAGACCATTGAGGGCTCTGGACGCACAGAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023531.15 ENSMUST00000164050.8 |
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| CDS GCA 72 bp | CTTCTCCGTCTCTCCTTTGTAGTCGTATCCCAGGGCTaGTTTGTCCCGTTTATCCTTCTCTACCCCGTAGCG | + |
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Preference number: 6 (lower is better) Translates to: LLRLSFVVVSQG*FVPFILLYPVA Trigger: CGCTACGGGGTAGAGAAGGATAAACGGGACAAAGCAGCCCTGGGATACGACTACAAAGGAGAGACGGAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS CAA 72 bp | TGGGATGCCTTAGGCCCCGATTCCAGCTCCTTCTTCTaGAGGATGTCGTGCTCCTCTGACACTTTGTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: WDALGPDSSSFF*RMSCSSDTLFL Trigger: GAGGAACAAAGTGTCAGAGGAGCACGACATCCTCAAGAAGAAGGAGCTGGAATCGGGGCCTAAGGCATCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023531.15 ENSMUST00000164050.8 |
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| CDS CCA 72 bp | GGTCCCTCTCAACTCCATATTTGCCCCCAAAGCCTCTaGCGGCATCAGTCTGAGATGAGTGTTTCTCCACAT | + |
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Preference number: 6 (lower is better) Translates to: GPSQLHICPQSL*RHQSEMSVSPH Trigger: ATGTGGAGAAACACTCATCTCAGACTGATGCCGCCAGAGGCTTTGGGGGCAAATATGGAGTTGAGAGGGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023531.15 ENSMUST00000164050.8 |
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| CDS CAA 90 bp | GATGATGTCATCTGGATCAAAGGAAAGCTCATCGCTTCCCTCTCCTaGGTAATCATACAGGGCTATAGCAGAGATCCCCGCACCACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: DDVIWIKGKLIASLS*VIIQGYSRDPRTTS Trigger: GCTGGTGGTGCGGGGATCTCTGCTATAGCCCTGTATGATTACCAAGGAGAGGGAAGCGATGAGCTTTCCTTTGATCCAGATGACATCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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| CDS TCA 72 bp | CCATATTTGCCCCCAAAGCCTCTGGCGGCATCAGTCTaGGATGAGTGTTTCTCCACATCAGCAACATACTCG | + |
|
Preference number: 6 (lower is better) Translates to: PYLPPKPLAASV*DECFSTSATYS Trigger: CGAGTATGTTGCTGATGTGGAGAAACACTCATCTCAGACTGATGCCGCCAGAGGCTTTGGGGGCAAATATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023531.15 ENSMUST00000164050.8 |
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| CDS CAA 72 bp | ATCTGGATCAAAGGAAAGCTCATCGCTTCCCTCTCCTaGGTAATCATACAGGGCTATAGCAGAGATCCCCGC | + |
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Preference number: 6 (lower is better) Translates to: IWIKGKLIASLS*VIIQGYSRDPR Trigger: GCGGGGATCTCTGCTATAGCCCTGTATGATTACCAAGGAGAGGGAAGCGATGAGCTTTCCTTTGATCCAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023531.15 |
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