Pregenerated sensors for HCK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003283Ensembl transcript IDs: ENSMUST00000003370.14, ENSMUST00000109799.8, ENSMUST00000189688.2
Found 173 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TCATTCCAGGCAAATGAGACATACCAACTTGGAGGCCCTGAGAGTGGCGGATTGGGCGTGTCAAGGCACTaGTGGGGCTTCTGGCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: SFQANETYQLGGPESGGLGVSRH*WGFWLC Trigger: GCAGAGCCAGAAGCCCCATCAGTGCCTTGACACGCC...CAATCCGCCACTCTCAGGGCCTCCAAGTTGGTATGTCTCATTTGCCTGGAATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| 3UTR-3UTR GCA 90 bp | TTCAGTCATTCCAGGCAAATGAGACATACCAACTTGGAGGCCCTGAGAGTGGCGCACCCACTCAACAGCTaGAGTGTGTGTGGTGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: FSHSRQMRHTNLEALRVAHPLNS*SVCGVV Trigger: CACCACACCACACACACTGCAGCTGTTGAGTGGGTG...CGCCACTCTCAGGGCCTCCAAGTTGGTATGTCTCATTTGCCTGGAATGACTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| 3UTR-3UTR TCA 90 bp | TTCAGTCATTCCAGGCAAATGAGACATACCAACTTGGAGGCCCTGAGAGTGGCGGTCAGAAAGAGATTGTaGAGTCCTCCCACCCACTCA | + |
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Preference number: 2 (lower is better) Translates to: FSHSRQMRHTNLEALRVAVRKRL*SPPTHS Trigger: TGAGTGGGTGGGAGGACTTCACAATCTCTTTCTGAC...CGCCACTCTCAGGGCCTCCAAGTTGGTATGTCTCATTTGCCTGGAATGACTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| 3UTR TCA 72 bp | GAGAGTGGGCCCAGCAAGTTGGGCGTGTCAAGGCACTaGTGGGGCTTCTGGCTCTGCTCATGTCCTTACTGC | + |
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Preference number: 3 (lower is better) Translates to: ESGPSKLGVSRH*WGFWLCSCPYC Trigger: GCAGTAAGGACATGAGCAGAGCCAGAAGCCCCATCAGTGCCTTGACACGCCCAACTTGCTGGGCCCACTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| 3UTR CCA 72 bp | TGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTaGGCGTGTCAAGGCACTGATGGGGCTTCTGGCTCT | + |
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Preference number: 3 (lower is better) Translates to: CVVWCLRVGPAS*ACQGTDGASGS Trigger: AGAGCCAGAAGCCCCATCAGTGCCTTGACACGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| 3UTR TCA 72 bp | GGCGGATTGCAGATGACTAGAGTCAGAAAGAGATTGTaGAGTCCTCCCACCCACTCAACAGCTGCAGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: GGLQMTRVRKRL*SPPTHSTAAVC Trigger: ACACACTGCAGCTGTTGAGTGGGTGGGAGGACTTCACAATCTCTTTCTGACTCTAGTCATCTGCAATCCGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR GCA 90 bp | GGCCCAGCAAGTTGGGCGTGTCAAGGCACTGATGGGGCTTCTGGCTCTGCTCATGGTAGCCAGGGACCGTaGCTTCCACCACTCCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: GPASWACQGTDGASGSAHGSQGP*LPPLPS Trigger: GCTGGGGAGTGGTGGAAGGCACGGTCCCTGGCTACC...ATGAGCAGAGCCAGAAGCCCCATCAGTGCCTTGACACGCCCAACTTGCTGGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGTGTCAAGGCCCTGGAGCCAGGAGGTaGCGCTCTGCATCCTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VCVVWCLRVGPASWACQGPGARR*RSASFR Trigger: CCGGAAGGATGCAGAGCGCCACCTCCTGGCTCCAGG...GCCTTGACACGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR CCA 90 bp | AGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGTGGCCCAGCATGTTGCCTaGAGCCAGGAGGTGGCGCTC | + |
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Preference number: 4 (lower is better) Translates to: SCSVCGVVSESGPSKLGVAQHVA*SQEVAL Trigger: GAGCGCCACCTCCTGGCTCCAGGCAACATGCTGGGC...CACGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR CCA 90 bp | ACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGGCCCAGCATGTTGCCTaGAGCCAGGAGGTGGCGCTC | + |
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Preference number: 4 (lower is better) Translates to: TAAVCVVWCLRVGPASWAAQHVA*SQEVAL Trigger: GAGCGCCACCTCCTGGCTCCAGGCAACATGCTGGGC...CGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR CCA 90 bp | TCAACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGCCGCCCTTCGCTTCGTaGGCAGCCCGGATCCTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: STAAVCVVWCLRVGPASWPPFAS*AARILA Trigger: TGCGAGGATCCGGGCTGCCCACGAAGCGAAGGGCGG...CCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCTGTTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003370.14 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGTGTCAAGGCAGACACACAGGGCACTaGCAGCTTCTGGCAGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: VCVVWCLRVGPASWACQGRHTGH*QLLAEP Trigger: GGGCTCTGCCAGAAGCTGTCAGTGCCCTGTGTGTCT...GCCTTGACACGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR GCA 90 bp | TCAACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGGTAGCCAGGGACCGTaGCTTCCACCACTCCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: STAAVCVVWCLRVGPASWGSQGP*LPPLPS Trigger: GCTGGGGAGTGGTGGAAGGCACGGTCCCTGGCTACC...CCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCTGTTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR GCA 90 bp | ACCCACTCAACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCACAGGAGGTGGCGCTCTaGATCCTTCCGGCTGATCCC | + |
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Preference number: 4 (lower is better) Translates to: THSTAAVCVVWCLRVGPAQEVAL*ILPADP Trigger: GGGATCAGCCGGAAGGATGCAGAGCGCCACCTCCTG...TGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCTGTTGAGTGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR CCA 90 bp | TCAACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCCCAGCATGTTGCCTaGAGCCAGGAGGTGGCGCTC | + |
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Preference number: 4 (lower is better) Translates to: STAAVCVVWCLRVGPASWAQHVA*SQEVAL Trigger: GAGCGCCACCTCCTGGCTCCAGGCAACATGCTGGGC...CCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCTGTTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR CCA 90 bp | AGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGTGGGCACTGACAGCTTCTaGCAGAGCCCATCCTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: SCSVCGVVSESGPSKLGVGTDSF*QSPSFP Trigger: GGGGAAGGATGGGCTCTGCCAGAAGCTGTCAGTGCC...CACGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR CCA 90 bp | ACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGGGCACTGACAGCTTCTaGCAGAGCCCATCCTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: TAAVCVVWCLRVGPASWAGTDSF*QSPSFP Trigger: GGGGAAGGATGGGCTCTGCCAGAAGCTGTCAGTGCC...CGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR TCA 90 bp | AGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGTGGTTCCTGCAGGCTGCTaGAGGTGCTCCTTGGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: SCSVCGVVSESGPSKLGVVPAGC*RCSLER Trigger: TCTCTCCAAGGAGCACCTTCAGCAGCCTGCAGGAAC...CACGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR TCA 90 bp | ACCCACTCAACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGACACACAGGGCACTaGCAGCTTCTGGCAGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: THSTAAVCVVWCLRVGPARHTGH*QLLAEP Trigger: GGGCTCTGCCAGAAGCTGTCAGTGCCCTGTGTGTCT...TGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCTGTTGAGTGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR GCA 90 bp | AGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGTGTGTTTGGTCCCAGCTTaGTGGAGGACGTGGGATCCG | + |
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Preference number: 4 (lower is better) Translates to: SCSVCGVVSESGPSKLGVCLVPA*WRTWDP Trigger: CGGATCCCACGTCCTCCAGCAAGCTGGGACCAAACA...CACGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR GCA 90 bp | AGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGTGTGGAGCACGAGTTCCTaGAGGCTGCTGAAGGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: SCSVCGVVSESGPSKLGVWSTSS*RLLKVL Trigger: GAGCACCTTCAGCAGCCTGCAGGAACTCGTGCTCCA...CACGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR GCA 90 bp | ACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGTGGAGCACGAGTTCCTaGAGGCTGCTGAAGGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: TAAVCVVWCLRVGPASWAWSTSS*RLLKVL Trigger: GAGCACCTTCAGCAGCCTGCAGGAACTCGTGCTCCA...CGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR CCA 90 bp | ACCCACTCAACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAGGCACTGACAGCTTCTaGCAGAGCCCATCCTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: THSTAAVCVVWCLRVGPAGTDSF*QSPSFP Trigger: GGGGAAGGATGGGCTCTGCCAGAAGCTGTCAGTGCC...TGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCTGTTGAGTGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR TCA 90 bp | CTCAACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGAGACACACAGGGCACTaGCAGCTTCTGGCAGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: LNSCSVCGVVSESGPSKLRHTGH*QLLAEP Trigger: GGGCTCTGCCAGAAGCTGTCAGTGCCCTGTGTGTCT...CAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCTGTTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGTGTCAAGGCAGGCCTCCACGGACATaGTCCCTGGCTTCATTGTCT | + |
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Preference number: 4 (lower is better) Translates to: VCVVWCLRVGPASWACQGRPPRT*SLASLS Trigger: AGACAATGAAGCCAGGGAGCATGTCCGTGGAGGCCT...GCCTTGACACGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR TCA 90 bp | TCAACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGTTCCTGCAGGCTGCTaGAGGTGCTCCTTGGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: STAAVCVVWCLRVGPASWVPAGC*RCSLER Trigger: TCTCTCCAAGGAGCACCTTCAGCAGCCTGCAGGAAC...CCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCTGTTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR TCA 90 bp | CTCAACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGTTCCTGCAGGCTGCTaGAGGTGCTCCTTGGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: LNSCSVCGVVSESGPSKLVPAGC*RCSLER Trigger: TCTCTCCAAGGAGCACCTTCAGCAGCCTGCAGGAAC...CAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCTGTTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR GCA 90 bp | TACCAACTTGGAGGCCCTGAGAGTGGCGGATTGCAGATGACTAGAGTCAGAAAGGGTAGCCAGGGACCGTaGCTTCCACCACTCCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: YQLGGPESGGLQMTRVRKGSQGP*LPPLPS Trigger: GCTGGGGAGTGGTGGAAGGCACGGTCCCTGGCTACC...CTTTCTGACTCTAGTCATCTGCAATCCGCCACTCTCAGGGCCTCCAAGTTGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR CCA 90 bp | TGGGCGTGTCAAGGCACTGATGGGGCTTCTGGCTCTGCTCATGTCCTTACTGCTGCTTGCTGGAGGACGTaGGATCCGGCACATACACAG | + |
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Preference number: 4 (lower is better) Translates to: WACQGTDGASGSAHVLTAACWRT*DPAHTQ Trigger: CTGTGTATGTGCCGGATCCCACGTCCTCCAGCAAGC...AGCAGTAAGGACATGAGCAGAGCCAGAAGCCCCATCAGTGCCTTGACACGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR CCA 90 bp | AGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGTGATCTGGTCTCCCTTCTaGAAGCTGAGGTCTTCACGG | + |
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Preference number: 4 (lower is better) Translates to: SCSVCGVVSESGPSKLGVIWSPF*KLRSSR Trigger: CCGTGAAGACCTCAGCTTCCAGAAGGGAGACCAGAT...CACGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR CCA 90 bp | TTCAGTCATTCCAGGCAAATGAGACATACCAACTTGGAGGCCCTGAGAGTGGCGCCTGGAGCCAGGAGGTaGCGCTCTGCATCCTTCCGG | + |
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Preference number: 4 (lower is better) Translates to: FSHSRQMRHTNLEALRVAPGARR*RSASFR Trigger: CCGGAAGGATGCAGAGCGCCACCTCCTGGCTCCAGG...CGCCACTCTCAGGGCCTCCAAGTTGGTATGTCTCATTTGCCTGGAATGACTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGTGTCAAGGCAGTAGCTCCCTTTGGTaGTCTCACTGTCCCGGATCA | + |
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Preference number: 4 (lower is better) Translates to: VCVVWCLRVGPASWACQGSSSLW*SHCPGS Trigger: TGATCCGGGACAGTGAGACCACCAAAGGGAGCTACT...GCCTTGACACGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR CCA 90 bp | GCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGTGTCAAATGGCTTCTGGGGTTTaGGAGACACACAGGGCACTG | + |
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Preference number: 4 (lower is better) Translates to: AVCVVWCLRVGPASWACQMASGV*ETHRAL Trigger: CAGTGCCCTGTGTGTCTCCCAAACCCCAGAAGCCAT...TTGACACGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGTGTCAAGGCACTTGGCTCTGTTTTTaGGGCCTTGCTTCCATCTCG | + |
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Preference number: 4 (lower is better) Translates to: VCVVWCLRVGPASWACQGTWLCF*GLASIS Trigger: CGAGATGGAAGCAAGGCCTCAAAAACAGAGCCAAGT...GCCTTGACACGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR TCA 90 bp | AGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGTGTGCCTTCTTCACTCTTaGGAAAGTCCAGCAGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: SCSVCGVVSESGPSKLGVCLLHS*ESPAGF Trigger: GAAGCCTGCTGGACTTTCTCAAGAGTGAAGAAGGCA...CACGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGTGTCAAGGCTGCCTTCTTCACTCTTaGGAAAGTCCAGCAGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: VCVVWCLRVGPASWACQGCLLHS*ESPAGF Trigger: GAAGCCTGCTGGACTTTCTCAAGAGTGAAGAAGGCA...GCCTTGACACGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR TCA 90 bp | AACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGGGCTGAGAAGTCAATaGGTTTTGGCAGTGGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: NSCSVCGVVSESGPSKLGGLRSQ*VLAVAA Trigger: AGCAGCCACTGCCAAAACTCATTGACTTCTCAGCCC...GCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR TCA 90 bp | GCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGTGTCAAGGGCTGAGAAGTCAATaGGTTTTGGCAGTGGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: AVCVVWCLRVGPASWACQGLRSQ*VLAVAA Trigger: AGCAGCCACTGCCAAAACTCATTGACTTCTCAGCCC...TTGACACGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR GCA 90 bp | GTGAAGTCCTCCCACCCACTCAACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGGCCTCCACGGACATaGTCCCTGGCTTCATTGTCT | + |
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Preference number: 4 (lower is better) Translates to: VKSSHPLNSCSVCGVVSERPPRT*SLASLS Trigger: AGACAATGAAGCCAGGGAGCATGTCCGTGGAGGCCT...CTCAGACACCACACCACACACACTGCAGCTGTTGAGTGGGTGGGAGGACTTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR CCA 90 bp | AACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGCTGTTGCTGTTGTTTaGTCCCAGCTTGCTGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: NSCSVCGVVSESGPSKLGAVAVV*SQLAGG Trigger: TCCTCCAGCAAGCTGGGACCAAACAACAGCAACAGC...GCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR CCA 90 bp | GCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGTGTCAAATCTGGTCTCCCTTCTaGAAGCTGAGGTCTTCACGG | + |
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Preference number: 4 (lower is better) Translates to: AVCVVWCLRVGPASWACQIWSPF*KLRSSR Trigger: CCGTGAAGACCTCAGCTTCCAGAAGGGAGACCAGAT...TTGACACGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR CCA 90 bp | GCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGTGTCAAAGTAGCTCCCTTTGGTaGTCTCACTGTCCCGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: AVCVVWCLRVGPASWACQSSSLW*SHCPGS Trigger: TGATCCGGGACAGTGAGACCACCAAAGGGAGCTACT...TTGACACGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CCA 90 bp | TGGGCGTGTCAAGGCACTGATGGGGCTTCTGGCTCTGCTCATGTCCTTACTGCTACGAGTAGCTCCCTTTaGTGGTCTCACTGTCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: WACQGTDGASGSAHVLTATSSSL*WSHCPG Trigger: TCCGGGACAGTGAGACCACCAAAGGGAGCTACTCGT...AGCAGTAAGGACATGAGCAGAGCCAGAAGCCCCATCAGTGCCTTGACACGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CCA 90 bp | GTGAAGTCCTCCCACCCACTCAACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGCACGGACATGCTCCCTaGCTTCATTGTCTTCACCGC | + |
|
Preference number: 4 (lower is better) Translates to: VKSSHPLNSCSVCGVVSEHGHAP*LHCLHR Trigger: GCGGTGAAGACAATGAAGCCAGGGAGCATGTCCGTG...CTCAGACACCACACCACACACACTGCAGCTGTTGAGTGGGTGGGAGGACTTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CCA 90 bp | AGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGTGGAAGTCAATGAGTTTTaGCAGTGGCTGCTTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SCSVCGVVSESGPSKLGVEVNEF*QWLLAA Trigger: GGCAGCAAGCAGCCACTGCCAAAACTCATTGACTTC...CACGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CCA 90 bp | GCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGTGTCAACAGAGACTAAGATGTTaGCAGCCCTCAGGTCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: AVCVVWCLRVGPASWACQQRLRC*QPSGLG Trigger: ACCGAGACCTGAGGGCTGCCAACATCTTAGTCTCTG...TTGACACGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CCA 90 bp | ACCCACTCAACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCACAGAGACTAAGATGTTaGCAGCCCTCAGGTCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: THSTAAVCVVWCLRVGPAQRLRC*QPSGLG Trigger: ACCGAGACCTGAGGGCTGCCAACATCTTAGTCTCTG...TGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCTGTTGAGTGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR TCA 90 bp | GTGAAGTCCTCCCACCCACTCAACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGATAAAGATGGGCTCCTaGGAGACCACAGCGTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VKSSHPLNSCSVCGVVSEIKMGS*ETTACS Trigger: GCTACACGCTGTGGTCTCTCAGGAGCCCATCTTTAT...CTCAGACACCACACCACACACACTGCAGCTGTTGAGTGGGTGGGAGGACTTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR TCA 90 bp | ACCCACTCAACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTCCTCTGCTCAATaGAGGCCATGCCTTCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: THSTAAVCVVWCLRVGPASSSAQ*RPCLLR Trigger: TCTCAGAAGGCATGGCCTTCATTGAGCAGAGGAACT...TGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCTGTTGAGTGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR TCA 90 bp | GCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGTGTCAAAGTTCCTCTGCTCAATaGAGGCCATGCCTTCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AVCVVWCLRVGPASWACQSSSAQ*RPCLLR Trigger: TCTCAGAAGGCATGGCCTTCATTGAGCAGAGGAACT...TTGACACGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR TCA 90 bp | TCAACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGGATCCGGCCATAGGTaGCAATTTCCATCAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: STAAVCVVWCLRVGPASWGSGHR*QFPSAG Trigger: TCCTGCTGATGGAAATTGTCACCTATGGCCGGATCC...CCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCTGTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGTGTCAAGGCTCCAGCAGCGGATCATaGTATTGTAGAGCTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VCVVWCLRVGPASWACQGSSSGS*YCRALL Trigger: CAGAAGAGCTCTACAATATCATGATCCGCTGCTGGA...GCCTTGACACGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR GCA 90 bp | AGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGTGTTCACCAGTTTGTCATaGTGCAGCGACTTCATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SCSVCGVVSESGPSKLGVFTSLS*CSDFIR Trigger: CCTGATGAAGTCGCTGCAGCATGACAAACTGGTGAA...CACGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CCA 90 bp | TGGGCGTGTCAAGGCACTGATGGGGCTTCTGGCTCTGCTCATGTCCTTACTGCTATCTGGTCTCCCTTCTaGAAGCTGAGGTCTTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: WACQGTDGASGSAHVLTAIWSPF*KLRSSR Trigger: CCGTGAAGACCTCAGCTTCCAGAAGGGAGACCAGAT...AGCAGTAAGGACATGAGCAGAGCCAGAAGCCCCATCAGTGCCTTGACACGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CCA 90 bp | GCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGTGTCAAAGCATCTTTCTCCCATaGCTTCTGGGGTTTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AVCVVWCLRVGPASWACQSIFLP*LLGFGR Trigger: TCTCCCAAACCCCAGAAGCCATGGGAGAAAGATGCT...TTGACACGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CCA 90 bp | ACCCACTCAACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGCATCTTTCTCCCATaGCTTCTGGGGTTTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: THSTAAVCVVWCLRVGPASIFLP*LLGFGR Trigger: TCTCCCAAACCCCAGAAGCCATGGGAGAAAGATGCT...TGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCTGTTGAGTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR TCA 90 bp | TACCAACTTGGAGGCCCTGAGAGTGGCGGATTGCAGATGACTAGAGTCAGAAAGCACTGTCCCGGATCATaGAGGAGCCCAGCATGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: YQLGGPESGGLQMTRVRKHCPGS*RSPACC Trigger: GCAACATGCTGGGCTCCTTCATGATCCGGGACAGTG...CTTTCTGACTCTAGTCATCTGCAATCCGCCACTCTCAGGGCCTCCAAGTTGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR TCA 90 bp | TGGGCGTGTCAAGGCACTGATGGGGCTTCTGGCTCTGCTCATGTCCTTACTGCTAGTTCCTCTGCTCAATaGAGGCCATGCCTTCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: WACQGTDGASGSAHVLTASSSAQ*RPCLLR Trigger: TCTCAGAAGGCATGGCCTTCATTGAGCAGAGGAACT...AGCAGTAAGGACATGAGCAGAGCCAGAAGCCCCATCAGTGCCTTGACACGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR GCA 90 bp | TACCAACTTGGAGGCCCTGAGAGTGGCGGATTGCAGATGACTAGAGTCAGAAAGTGTTTGGTCCCAGCTTaGTGGAGGACGTGGGATCCG | + |
|
Preference number: 4 (lower is better) Translates to: YQLGGPESGGLQMTRVRKCLVPA*WRTWDP Trigger: CGGATCCCACGTCCTCCAGCAAGCTGGGACCAAACA...CTTTCTGACTCTAGTCATCTGCAATCCGCCACTCTCAGGGCCTCCAAGTTGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR GCA 90 bp | AAAGAGATTGTGAAGTCCTCCCACCCACTCAACAGCTGCAGTGTGTGTGGTGTGTGGAGCACGAGTTCCTaGAGGCTGCTGAAGGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KEIVKSSHPLNSCSVCGVWSTSS*RLLKVL Trigger: GAGCACCTTCAGCAGCCTGCAGGAACTCGTGCTCCA...CACACCACACACACTGCAGCTGTTGAGTGGGTGGGAGGACTTCACAATCTCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR GCA 90 bp | TCAACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGAGTTTTGGCAGTGGCTaGTTGCTGCCTTCTTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: STAAVCVVWCLRVGPASWSFGSG*LLPSSL Trigger: GAGTGAAGAAGGCAGCAAGCAGCCACTGCCAAAACT...CCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCTGTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR CCA 90 bp | TCATTCCAGGCAAATGAGACATACCAACTTGGAGGCCCTGAGAGTGGCGGATTGGCTTGCTGGAGGACGTaGGATCCGGCACATACACAG | + |
|
Preference number: 4 (lower is better) Translates to: SFQANETYQLGGPESGGLACWRT*DPAHTQ Trigger: CTGTGTATGTGCCGGATCCCACGTCCTCCAGCAAGC...CAATCCGCCACTCTCAGGGCCTCCAAGTTGGTATGTCTCATTTGCCTGGAATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGTGTCAAGGCAGTTTCTTCTCCATCTaGAGGGATTCTCGAGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: VCVVWCLRVGPASWACQGSFFSI*RDSRGI Trigger: GATTCCTCGAGAATCCCTCCAGATGGAGAAGAAACT...GCCTTGACACGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CCA 90 bp | GCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGTGTCAAAATGAGTTTTGGCAGTaGCTGCTTGCTGCCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AVCVVWCLRVGPASWACQNEFWQ*LLAAFF Trigger: GAAGAAGGCAGCAAGCAGCCACTGCCAAAACTCATT...TTGACACGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CCA 90 bp | CTCAACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGAAGTCAATGAGTTTTaGCAGTGGCTGCTTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LNSCSVCGVVSESGPSKLEVNEF*QWLLAA Trigger: GGCAGCAAGCAGCCACTGCCAAAACTCATTGACTTC...CAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCTGTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGTGTCAAGGCATGCCTTCTGAGATCTaGGCTGAGAAGTCAATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VCVVWCLRVGPASWACQGMPSEI*AEKSMS Trigger: ACTCATTGACTTCTCAGCCCAGATCTCAGAAGGCAT...GCCTTGACACGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CCA 90 bp | AAAGAGATTGTGAAGTCCTCCCACCCACTCAACAGCTGCAGTGTGTGTGGTGTGACGAGTAGCTCCCTTTaGTGGTCTCACTGTCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: KEIVKSSHPLNSCSVCGVTSSSL*WSHCPG Trigger: TCCGGGACAGTGAGACCACCAAAGGGAGCTACTCGT...CACACCACACACACTGCAGCTGTTGAGTGGGTGGGAGGACTTCACAATCTCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CCA 90 bp | GAGTCAGAAAGAGATTGTGAAGTCCTCCCACCCACTCAACAGCTGCAGTGTGTGATGGCTTCTGGGGTTTaGGAGACACACAGGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: ESERDCEVLPPTQQLQCVMASGV*ETHRAL Trigger: CAGTGCCCTGTGTGTCTCCCAAACCCCAGAAGCCAT...CACACACTGCAGCTGTTGAGTGGGTGGGAGGACTTCACAATCTCTTTCTGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CCA 90 bp | GCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGTGTCAAAGTTTCTTCTCCATCTaGAGGGATTCTCGAGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: AVCVVWCLRVGPASWACQSFFSI*RDSRGI Trigger: GATTCCTCGAGAATCCCTCCAGATGGAGAAGAAACT...TTGACACGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CCA 90 bp | TCATTCCAGGCAAATGAGACATACCAACTTGGAGGCCCTGAGAGTGGCGGATTGCACGGACATGCTCCCTaGCTTCATTGTCTTCACCGC | + |
|
Preference number: 4 (lower is better) Translates to: SFQANETYQLGGPESGGLHGHAP*LHCLHR Trigger: GCGGTGAAGACAATGAAGCCAGGGAGCATGTCCGTG...CAATCCGCCACTCTCAGGGCCTCCAAGTTGGTATGTCTCATTTGCCTGGAATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CCA 90 bp | AAAGAGATTGTGAAGTCCTCCCACCCACTCAACAGCTGCAGTGTGTGTGGTGTGCACGGACATGCTCCCTaGCTTCATTGTCTTCACCGC | + |
|
Preference number: 4 (lower is better) Translates to: KEIVKSSHPLNSCSVCGVHGHAP*LHCLHR Trigger: GCGGTGAAGACAATGAAGCCAGGGAGCATGTCCGTG...CACACCACACACACTGCAGCTGTTGAGTGGGTGGGAGGACTTCACAATCTCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CCA 90 bp | GTGAAGTCCTCCCACCCACTCAACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAATGAGTTTTGGCAGTaGCTGCTTGCTGCCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VKSSHPLNSCSVCGVVSENEFWQ*LLAAFF Trigger: GAAGAAGGCAGCAAGCAGCCACTGCCAAAACTCATT...CTCAGACACCACACCACACACACTGCAGCTGTTGAGTGGGTGGGAGGACTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CCA 90 bp | CTCAACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGAATGAGTTTTGGCAGTaGCTGCTTGCTGCCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LNSCSVCGVVSESGPSKLNEFWQ*LLAAFF Trigger: GAAGAAGGCAGCAAGCAGCCACTGCCAAAACTCATT...CAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCTGTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CCA 90 bp | ACCCACTCAACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAATTGTAGAGCTCTTCTaGACAGTTATCTGGTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: THSTAAVCVVWCLRVGPAIVELF*TVIWSR Trigger: CCTCGACCAGATAACTGTCCAGAAGAGCTCTACAAT...TGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCTGTTGAGTGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CCA 90 bp | TGGGCGTGTCAAGGCACTGATGGGGCTTCTGGCTCTGCTCATGTCCTTACTGCTTCATCCAGCACACTCTaGATGTATTCAAAGGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: WACQGTDGASGSAHVLTASSSTL*MYSKVG Trigger: GCCCACCTTTGAATACATCCAGAGTGTGCTGGATGA...AGCAGTAAGGACATGAGCAGAGCCAGAAGCCCCATCAGTGCCTTGACACGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR TCA 90 bp | TCATTCCAGGCAAATGAGACATACCAACTTGGAGGCCCTGAGAGTGGCGGATTGATAAAGATGGGCTCCTaGGAGACCACAGCGTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFQANETYQLGGPESGGLIKMGS*ETTACS Trigger: GCTACACGCTGTGGTCTCTCAGGAGCCCATCTTTAT...CAATCCGCCACTCTCAGGGCCTCCAAGTTGGTATGTCTCATTTGCCTGGAATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR TCA 90 bp | TACCAACTTGGAGGCCCTGAGAGTGGCGGATTGCAGATGACTAGAGTCAGAAAGATAAAGATGGGCTCCTaGGAGACCACAGCGTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: YQLGGPESGGLQMTRVRKIKMGS*ETTACS Trigger: GCTACACGCTGTGGTCTCTCAGGAGCCCATCTTTAT...CTTTCTGACTCTAGTCATCTGCAATCCGCCACTCTCAGGGCCTCCAAGTTGGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR TCA 90 bp | AAAGAGATTGTGAAGTCCTCCCACCCACTCAACAGCTGCAGTGTGTGTGGTGTGGGATCCGGCCATAGGTaGCAATTTCCATCAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KEIVKSSHPLNSCSVCGVGSGHR*QFPSAG Trigger: TCCTGCTGATGGAAATTGTCACCTATGGCCGGATCC...CACACCACACACACTGCAGCTGTTGAGTGGGTGGGAGGACTTCACAATCTCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR GCA 90 bp | ATTGAATTCAGTCATTCCAGGCAAATGAGACATACCAACTTGGAGGCCCTGAGACAGGAGGTGGCGCTCTaGATCCTTCCGGCTGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: IEFSHSRQMRHTNLEALRQEVAL*ILPADP Trigger: GGGATCAGCCGGAAGGATGCAGAGCGCCACCTCCTG...TCTCAGGGCCTCCAAGTTGGTATGTCTCATTTGCCTGGAATGACTGAATTCAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGTCATTCCAGGCAAATGAGACATACCAACTTGGAGGCCCTGAGAGTGGCGGCTGTTGCTGTTGTTTaGTCCCAGCTTGCTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSHSRQMRHTNLEALRVAAVAVV*SQLAGG Trigger: TCCTCCAGCAAGCTGGGACCAAACAACAGCAACAGC...CGCCACTCTCAGGGCCTCCAAGTTGGTATGTCTCATTTGCCTGGAATGACTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CCA 90 bp | TACCAACTTGGAGGCCCTGAGAGTGGCGGATTGCAGATGACTAGAGTCAGAAAGGCTGTTGCTGTTGTTTaGTCCCAGCTTGCTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YQLGGPESGGLQMTRVRKAVAVV*SQLAGG Trigger: TCCTCCAGCAAGCTGGGACCAAACAACAGCAACAGC...CTTTCTGACTCTAGTCATCTGCAATCCGCCACTCTCAGGGCCTCCAAGTTGGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGTCATTCCAGGCAAATGAGACATACCAACTTGGAGGCCCTGAGAGTGGCGAGTAGCTCCCTTTGGTaGTCTCACTGTCCCGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: FSHSRQMRHTNLEALRVASSSLW*SHCPGS Trigger: TGATCCGGGACAGTGAGACCACCAAAGGGAGCTACT...CGCCACTCTCAGGGCCTCCAAGTTGGTATGTCTCATTTGCCTGGAATGACTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CCA 90 bp | TGGGCGTGTCAAGGCACTGATGGGGCTTCTGGCTCTGCTCATGTCCTTACTGCTATGCCTTCTGAGATCTaGGCTGAGAAGTCAATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: WACQGTDGASGSAHVLTAMPSEI*AEKSMS Trigger: ACTCATTGACTTCTCAGCCCAGATCTCAGAAGGCAT...AGCAGTAAGGACATGAGCAGAGCCAGAAGCCCCATCAGTGCCTTGACACGCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CCA 90 bp | GTGAAGTCCTCCCACCCACTCAACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGATGCCTTCTGAGATCTaGGCTGAGAAGTCAATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VKSSHPLNSCSVCGVVSEMPSEI*AEKSMS Trigger: ACTCATTGACTTCTCAGCCCAGATCTCAGAAGGCAT...CTCAGACACCACACCACACACACTGCAGCTGTTGAGTGGGTGGGAGGACTTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CCA 90 bp | TCATTCCAGGCAAATGAGACATACCAACTTGGAGGCCCTGAGAGTGGCGGATTGCAGAGACTAAGATGTTaGCAGCCCTCAGGTCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SFQANETYQLGGPESGGLQRLRC*QPSGLG Trigger: ACCGAGACCTGAGGGCTGCCAACATCTTAGTCTCTG...CAATCCGCCACTCTCAGGGCCTCCAAGTTGGTATGTCTCATTTGCCTGGAATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CCA 90 bp | TGGGCGTGTCAAGGCACTGATGGGGCTTCTGGCTCTGCTCATGTCCTTACTGCTATTGTAGAGCTCTTCTaGACAGTTATCTGGTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: WACQGTDGASGSAHVLTAIVELF*TVIWSR Trigger: CCTCGACCAGATAACTGTCCAGAAGAGCTCTACAAT...AGCAGTAAGGACATGAGCAGAGCCAGAAGCCCCATCAGTGCCTTGACACGCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR TCA 90 bp | AAAGAGATTGTGAAGTCCTCCCACCCACTCAACAGCTGCAGTGTGTGTGGTGTGACTTGGCTCTGTTTTTaGGGCCTTGCTTCCATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KEIVKSSHPLNSCSVCGVTWLCF*GLASIS Trigger: CGAGATGGAAGCAAGGCCTCAAAAACAGAGCCAAGT...CACACCACACACACTGCAGCTGTTGAGTGGGTGGGAGGACTTCACAATCTCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR TCA 90 bp | GAGTCAGAAAGAGATTGTGAAGTCCTCCCACCCACTCAACAGCTGCAGTGTGTGTGCCTTCTTCACTCTTaGGAAAGTCCAGCAGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ESERDCEVLPPTQQLQCVCLLHS*ESPAGF Trigger: GAAGCCTGCTGGACTTTCTCAAGAGTGAAGAAGGCA...CACACACTGCAGCTGTTGAGTGGGTGGGAGGACTTCACAATCTCTTTCTGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR GCA 90 bp | TCATTCCAGGCAAATGAGACATACCAACTTGGAGGCCCTGAGAGTGGCGGATTGAGTTTTGGCAGTGGCTaGTTGCTGCCTTCTTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: SFQANETYQLGGPESGGLSFGSG*LLPSSL Trigger: GAGTGAAGAAGGCAGCAAGCAGCCACTGCCAAAACT...CAATCCGCCACTCTCAGGGCCTCCAAGTTGGTATGTCTCATTTGCCTGGAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGTCATTCCAGGCAAATGAGACATACCAACTTGGAGGCCCTGAGAGTGGCGCAGGGCCCTTCTGATTaGCACTTGGCTCTGTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FSHSRQMRHTNLEALRVAQGPSD*HLALFL Trigger: CAAAAACAGAGCCAAGTGCCAATCAGAAGGGCCCTG...CGCCACTCTCAGGGCCTCCAAGTTGGTATGTCTCATTTGCCTGGAATGACTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR TCA 90 bp | ATTGAATTCAGTCATTCCAGGCAAATGAGACATACCAACTTGGAGGCCCTGAGACACTGTCCCGGATCATaGAGGAGCCCAGCATGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: IEFSHSRQMRHTNLEALRHCPGS*RSPACC Trigger: GCAACATGCTGGGCTCCTTCATGATCCGGGACAGTG...TCTCAGGGCCTCCAAGTTGGTATGTCTCATTTGCCTGGAATGACTGAATTCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR TCA 90 bp | TACCAACTTGGAGGCCCTGAGAGTGGCGGATTGCAGATGACTAGAGTCAGAAAGTCCAGCAGCGGATCATaGTATTGTAGAGCTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YQLGGPESGGLQMTRVRKSSSGS*YCRALL Trigger: CAGAAGAGCTCTACAATATCATGATCCGCTGCTGGA...CTTTCTGACTCTAGTCATCTGCAATCCGCCACTCTCAGGGCCTCCAAGTTGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR TCA 90 bp | TTCAGTCATTCCAGGCAAATGAGACATACCAACTTGGAGGCCCTGAGAGTGGCGTCCAGCAGCGGATCATaGTATTGTAGAGCTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FSHSRQMRHTNLEALRVASSSGS*YCRALL Trigger: CAGAAGAGCTCTACAATATCATGATCCGCTGCTGGA...CGCCACTCTCAGGGCCTCCAAGTTGGTATGTCTCATTTGCCTGGAATGACTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR GCA 90 bp | GAGTCAGAAAGAGATTGTGAAGTCCTCCCACCCACTCAACAGCTGCAGTGTGTGTTCACCAGTTTGTCATaGTGCAGCGACTTCATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ESERDCEVLPPTQQLQCVFTSLS*CSDFIR Trigger: CCTGATGAAGTCGCTGCAGCATGACAAACTGGTGAA...CACACACTGCAGCTGTTGAGTGGGTGGGAGGACTTCACAATCTCTTTCTGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR GCA 90 bp | TACCAACTTGGAGGCCCTGAGAGTGGCGGATTGCAGATGACTAGAGTCAGAAAGTTCACCAGTTTGTCATaGTGCAGCGACTTCATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YQLGGPESGGLQMTRVRKFTSLS*CSDFIR Trigger: CCTGATGAAGTCGCTGCAGCATGACAAACTGGTGAA...CTTTCTGACTCTAGTCATCTGCAATCCGCCACTCTCAGGGCCTCCAAGTTGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CCA 90 bp | GAGTCAGAAAGAGATTGTGAAGTCCTCCCACCCACTCAACAGCTGCAGTGTGTGTCATCCAGCACACTCTaGATGTATTCAAAGGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ESERDCEVLPPTQQLQCVSSSTL*MYSKVG Trigger: GCCCACCTTTGAATACATCCAGAGTGTGCTGGATGA...CACACACTGCAGCTGTTGAGTGGGTGGGAGGACTTCACAATCTCTTTCTGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CCA 90 bp | ATTGAATTCAGTCATTCCAGGCAAATGAGACATACCAACTTGGAGGCCCTGAGAACGAGTAGCTCCCTTTaGTGGTCTCACTGTCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: IEFSHSRQMRHTNLEALRTSSSL*WSHCPG Trigger: TCCGGGACAGTGAGACCACCAAAGGGAGCTACTCGT...TCTCAGGGCCTCCAAGTTGGTATGTCTCATTTGCCTGGAATGACTGAATTCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CCA 90 bp | GAGTCAGAAAGAGATTGTGAAGTCCTCCCACCCACTCAACAGCTGCAGTGTGTGATTGTAGAGCTCTTCTaGACAGTTATCTGGTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ESERDCEVLPPTQQLQCVIVELF*TVIWSR Trigger: CCTCGACCAGATAACTGTCCAGAAGAGCTCTACAAT...CACACACTGCAGCTGTTGAGTGGGTGGGAGGACTTCACAATCTCTTTCTGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR TCA 90 bp | ATTGAATTCAGTCATTCCAGGCAAATGAGACATACCAACTTGGAGGCCCTGAGAGGGCTGAGAAGTCAATaGGTTTTGGCAGTGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IEFSHSRQMRHTNLEALRGLRSQ*VLAVAA Trigger: AGCAGCCACTGCCAAAACTCATTGACTTCTCAGCCC...TCTCAGGGCCTCCAAGTTGGTATGTCTCATTTGCCTGGAATGACTGAATTCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR TCA 90 bp | ATTGAATTCAGTCATTCCAGGCAAATGAGACATACCAACTTGGAGGCCCTGAGAGGATCCGGCCATAGGTaGCAATTTCCATCAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IEFSHSRQMRHTNLEALRGSGHR*QFPSAG Trigger: TCCTGCTGATGGAAATTGTCACCTATGGCCGGATCC...TCTCAGGGCCTCCAAGTTGGTATGTCTCATTTGCCTGGAATGACTGAATTCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CCA 90 bp | AACAGTTTCCACTTAAATCACAGCTATAGATTGAATTCAGTCATTCCAGGCAAACCTGGAGCCAGGAGGTaGCGCTCTGCATCCTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: NSFHLNHSYRLNSVIPGKPGARR*RSASFR Trigger: CCGGAAGGATGCAGAGCGCCACCTCCTGGCTCCAGG...TTTGCCTGGAATGACTGAATTCAATCTATAGCTGTGATTTAAGTGGAAACTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR TCA 90 bp | ATTGAATTCAGTCATTCCAGGCAAATGAGACATACCAACTTGGAGGCCCTGAGAACTTGGCTCTGTTTTTaGGGCCTTGCTTCCATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: IEFSHSRQMRHTNLEALRTWLCF*GLASIS Trigger: CGAGATGGAAGCAAGGCCTCAAAAACAGAGCCAAGT...TCTCAGGGCCTCCAAGTTGGTATGTCTCATTTGCCTGGAATGACTGAATTCAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CCA 90 bp | ATTGAATTCAGTCATTCCAGGCAAATGAGACATACCAACTTGGAGGCCCTGAGAAGCATCTTTCTCCCATaGCTTCTGGGGTTTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: IEFSHSRQMRHTNLEALRSIFLP*LLGFGR Trigger: TCTCCCAAACCCCAGAAGCCATGGGAGAAAGATGCT...TCTCAGGGCCTCCAAGTTGGTATGTCTCATTTGCCTGGAATGACTGAATTCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR GCA 90 bp | AACAGTTTCCACTTAAATCACAGCTATAGATTGAATTCAGTCATTCCAGGCAAAAGGCCTCCACGGACATaGTCCCTGGCTTCATTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NSFHLNHSYRLNSVIPGKRPPRT*SLASLS Trigger: AGACAATGAAGCCAGGGAGCATGTCCGTGGAGGCCT...TTTGCCTGGAATGACTGAATTCAATCTATAGCTGTGATTTAAGTGGAAACTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CCA 90 bp | AACAGTTTCCACTTAAATCACAGCTATAGATTGAATTCAGTCATTCCAGGCAAAATGGCTTCTGGGGTTTaGGAGACACACAGGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: NSFHLNHSYRLNSVIPGKMASGV*ETHRAL Trigger: CAGTGCCCTGTGTGTCTCCCAAACCCCAGAAGCCAT...TTTGCCTGGAATGACTGAATTCAATCTATAGCTGTGATTTAAGTGGAAACTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR GCA 90 bp | AACAGTTTCCACTTAAATCACAGCTATAGATTGAATTCAGTCATTCCAGGCAAAAGTTTTGGCAGTGGCTaGTTGCTGCCTTCTTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: NSFHLNHSYRLNSVIPGKSFGSG*LLPSSL Trigger: GAGTGAAGAAGGCAGCAAGCAGCCACTGCCAAAACT...TTTGCCTGGAATGACTGAATTCAATCTATAGCTGTGATTTAAGTGGAAACTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CCA 90 bp | AACAGTTTCCACTTAAATCACAGCTATAGATTGAATTCAGTCATTCCAGGCAAACAGGGCCCTTCTGATTaGCACTTGGCTCTGTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NSFHLNHSYRLNSVIPGKQGPSD*HLALFL Trigger: CAAAAACAGAGCCAAGTGCCAATCAGAAGGGCCCTG...TTTGCCTGGAATGACTGAATTCAATCTATAGCTGTGATTTAAGTGGAAACTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CCA 90 bp | AACAGTTTCCACTTAAATCACAGCTATAGATTGAATTCAGTCATTCCAGGCAAAGAAGTCAATGAGTTTTaGCAGTGGCTGCTTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NSFHLNHSYRLNSVIPGKEVNEF*QWLLAA Trigger: GGCAGCAAGCAGCCACTGCCAAAACTCATTGACTTC...TTTGCCTGGAATGACTGAATTCAATCTATAGCTGTGATTTAAGTGGAAACTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS CCA 90 bp | CCTTGCTTCCATCTCGGAGGAACCTGGACTTCACGCATCCCATCCTaGGCGCCCGCCCTTCGCTTCGTGGGCAGCCCGGATCCTCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PCFHLGGTWTSRIPS*APALRFVGSPDPRS Trigger: GCTGCGAGGATCCGGGCTGCCCACGAAGCGAAGGGCGGGCGCCCAGGATGGGATGCGTGAAGTCCAGGTTCCTCCGAGATGGAAGCAAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003370.14 |
||
| CDS CCA 90 bp | CTCAGAGCCCTCCACAAACCCTGGGGGCATGCTGTTGCTGTTGTTTaGTCCCAGCTTGCTGGAGGACGTGGGATCCGGCACATACACAGG | + |
|
Preference number: 5 (lower is better) Translates to: LRALHKPWGHAVAVV*SQLAGGRGIRHIHR Trigger: CCTGTGTATGTGCCGGATCCCACGTCCTCCAGCAAGCTGGGACCAAACAACAGCAACAGCATGCCCCCAGGGTTTGTGGAGGGCTCTGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGTGTCAAGGCGCAGAGACTAAGATGTaGGCAGCCCTCAGGTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: VCVVWCLRVGPASWACQGAETKM*AALRSR Trigger: CCGAGACCTGAGGGCTGCCAACATCTTAGTCTCTGC...GCCTTGACACGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS GCA 90 bp | CCACAAACCCTGGGGGCATGCTGTTGCTGTTGTTTGGTCCCAGCTTaGTGGAGGACGTGGGATCCGGCACATACACAGGGCCCTTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: PQTLGACCCCCLVPA*WRTWDPAHTQGPSD Trigger: ATCAGAAGGGCCCTGTGTATGTGCCGGATCCCACGTCCTCCAGCAAGCTGGGACCAAACAACAGCAACAGCATGCCCCCAGGGTTTGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS GCA 90 bp | CAATGGTATCCTCAGAGCCCTCCACAAACCCTGGGGGCATGCTGTTaGTGTTGTTTGGTCCCAGCTTGCTGGAGGACGTGGGATCCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QWYPQSPPQTLGACC*CCLVPACWRTWDPA Trigger: TGCCGGATCCCACGTCCTCCAGCAAGCTGGGACCAAACAACAGCAACAGCATGCCCCCAGGGTTTGTGGAGGGCTCTGAGGATACCATTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS CCA 90 bp | CAAACCCTGGGGGCATGCTGTTGCTGTTGTTTGGTCCCAGCTTGCTaGAGGACGTGGGATCCGGCACATACACAGGGCCCTTCTGATTGG | + |
|
Preference number: 5 (lower is better) Translates to: QTLGACCCCCLVPAC*RTWDPAHTQGPSDW Trigger: CCAATCAGAAGGGCCCTGTGTATGTGCCGGATCCCACGTCCTCCAGCAAGCTGGGACCAAACAACAGCAACAGCATGCCCCCAGGGTTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CAA 90 bp | GCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGTGTCAATTGTTTGGTCCCAGCTaGCTGGAGGACGTGGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: AVCVVWCLRVGPASWACQLFGPS*LEDVGS Trigger: GGATCCCACGTCCTCCAGCAAGCTGGGACCAAACAA...TTGACACGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CAA 90 bp | ACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGTCCAGCAGGCTTCCTTaGGCCATGAACTCCGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: TAAVCVVWCLRVGPASWASSRLP*AMNSVT Trigger: TGTCACGGAGTTCATGGCCAAAGGAAGCCTGCTGGA...CGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS GCA 90 bp | CGACCACAATGGTATCCTCAGAGCCCTCCACAAACCCTGGGGGCATaGTGTTGCTGTTGTTTGGTCCCAGCTTGCTGGAGGACGTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RPQWYPQSPPQTLGA*CCCCLVPACWRTWD Trigger: ATCCCACGTCCTCCAGCAAGCTGGGACCAAACAACAGCAACAGCATGCCCCCAGGGTTTGTGGAGGGCTCTGAGGATACCATTGTGGTCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS GCA 90 bp | ATAGTTGCTTGGGATGTAGCCTTCCTTCTTGGTAGCCAGGGACCGTaGCTTCCACCACTCCCCAGCCTCCTCCAGAACCACCATCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: IVAWDVAFLLGSQGP*LPPLPSLLQNHHLV Trigger: GACCAGATGGTGGTTCTGGAGGAGGCTGGGGAGTGGTGGAAGGCACGGTCCCTGGCTACCAAGAAGGAAGGCTACATCCCAAGCAACTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CAA 90 bp | TCAACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGTTGTTTGGTCCCAGCTaGCTGGAGGACGTGGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: STAAVCVVWCLRVGPASWLFGPS*LEDVGS Trigger: GGATCCCACGTCCTCCAGCAAGCTGGGACCAAACAA...CCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCTGTTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CAA 90 bp | ACCCACTCAACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAGGCATGCTGTTGCTGTaGTTTGGTCCCAGCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: THSTAAVCVVWCLRVGPAGMLLL*FGPSLL Trigger: CAGCAAGCTGGGACCAAACAACAGCAACAGCATGCC...TGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCTGTTGAGTGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CAA 90 bp | AGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGTGTTCCGGCTGATCCCCTaGAAGAACCACTCTTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SCSVCGVVSESGPSKLGVFRLIP*KNHSSV Trigger: GACAGAAGAGTGGTTCTTCAAGGGGATCAGCCGGAA...CACGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CAA 90 bp | ACCCACTCAACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCATCCAGCAGGCTTCCTTaGGCCATGAACTCCGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: THSTAAVCVVWCLRVGPASSRLP*AMNSVT Trigger: TGTCACGGAGTTCATGGCCAAAGGAAGCCTGCTGGA...TGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCTGTTGAGTGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGTGTCAAGGCCGAGCTGTGTACTCATaGTCCTCGATGATTCGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VCVVWCLRVGPASWACQGRAVYS*SSMIRA Trigger: GGCACGAATCATCGAGGACAATGAGTACACAGCTCG...GCCTTGACACGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CAA 90 bp | TGGGCGTGTCAAGGCACTGATGGGGCTTCTGGCTCTGCTCATGTCCTTACTGCTCACTTGATGGGGAACTaGGCTCCTTCCCGAGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: WACQGTDGASGSAHVLTAHLMGN*APSRAV Trigger: CACAGCTCGGGAAGGAGCCAAGTTCCCCATCAAGTG...AGCAGTAAGGACATGAGCAGAGCCAGAAGCCCCATCAGTGCCTTGACACGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS TCA 90 bp | AGCTTGCTGGAGGACGTGGGATCCGGCACATACACAGGGCCCTTCTaGTTGGCACTTGGCTCTGTTTTTGAGGCCTTGCTTCCATCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SLLEDVGSGTYTGPF*LALGSVFEALLPSR Trigger: CCGAGATGGAAGCAAGGCCTCAAAAACAGAGCCAAGTGCCAATCAGAAGGGCCCTGTGTATGTGCCGGATCCCACGTCCTCCAGCAAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS CCA 90 bp | TGCTGGAGGACGTGGGATCCGGCACATACACAGGGCCCTTCTGATTaGCACTTGGCTCTGTTTTTGAGGCCTTGCTTCCATCTCGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: CWRTWDPAHTQGPSD*HLALFLRPCFHLGG Trigger: TCCTCCGAGATGGAAGCAAGGCCTCAAAAACAGAGCCAAGTGCCAATCAGAAGGGCCCTGTGTATGTGCCGGATCCCACGTCCTCCAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS CCA 90 bp | GTACAGTGCGACCACAATGGTATCCTCAGAGCCCTCCACAAACCCTaGGGGCATGCTGTTGCTGTTGTTTGGTCCCAGCTTGCTGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VQCDHNGILRALHKP*GHAVAVVWSQLAGG Trigger: TCCTCCAGCAAGCTGGGACCAAACAACAGCAACAGCATGCCCCCAGGGTTTGTGGAGGGCTCTGAGGATACCATTGTGGTCGCACTGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CAA 90 bp | TCAACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGTGCTGTTGCTGTTGTTaGGTCCCAGCTTGCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: STAAVCVVWCLRVGPASWCCCCC*VPACWR Trigger: CCTCCAGCAAGCTGGGACCAAACAACAGCAACAGCA...CCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCTGTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CAA 90 bp | CTCAACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGTGCTGTTGCTGTTGTTaGGTCCCAGCTTGCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LNSCSVCGVVSESGPSKLCCCCC*VPACWR Trigger: CCTCCAGCAAGCTGGGACCAAACAACAGCAACAGCA...CAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCTGTTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CAA 90 bp | TCAACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGGCATGCTGTTGCTGTaGTTTGGTCCCAGCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: STAAVCVVWCLRVGPASWGMLLL*FGPSLL Trigger: CAGCAAGCTGGGACCAAACAACAGCAACAGCATGCC...CCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCTGTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCGTGTCAAGGCGTGAAGGAACCAAAGTaGATGGCTTCAGGAGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VCVVWCLRVGPASWACQGVKEPK*MASGAV Trigger: GACAGCTCCTGAAGCCATCAACTTTGGTTCCTTCAC...GCCTTGACACGCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS GCA 90 bp | CTGGAAGCTGAGGTCTTCACGGTGAATAGCCTCATAGTCGTACAGTaGGACCACAATGGTATCCTCAGAGCCCTCCACAAACCCTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LEAEVFTVNSLIVVQ*DHNGILRALHKPWG Trigger: CCCCCAGGGTTTGTGGAGGGCTCTGAGGATACCATTGTGGTCGCACTGTACGACTATGAGGCTATTCACCGTGAAGACCTCAGCTTCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CAA 90 bp | ACCCACTCAACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCACACTTGGCTCTGTTTTaGAGGCCTTGCTTCCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: THSTAAVCVVWCLRVGPAHLALF*RPCFHL Trigger: GAGATGGAAGCAAGGCCTCAAAAACAGAGCCAAGTG...TGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCTGTTGAGTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CAA 90 bp | AACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGCCTGCCTTCTTCACTCTaGAGAAAGTCCAGCAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: NSCSVCGVVSESGPSKLGLPSSL*RKSSRL Trigger: AAGCCTGCTGGACTTTCTCAAGAGTGAAGAAGGCAG...GCCCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CAA 90 bp | GTGAAGTCCTCCCACCCACTCAACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGCACTTGGCTCTGTTTTaGAGGCCTTGCTTCCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: VKSSHPLNSCSVCGVVSEHLALF*RPCFHL Trigger: GAGATGGAAGCAAGGCCTCAAAAACAGAGCCAAGTG...CTCAGACACCACACCACACACACTGCAGCTGTTGAGTGGGTGGGAGGACTTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CAA 90 bp | GAGTCAGAAAGAGATTGTGAAGTCCTCCCACCCACTCAACAGCTGCAGTGTGTGTTGTTTGGTCCCAGCTaGCTGGAGGACGTGGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: ESERDCEVLPPTQQLQCVLFGPS*LEDVGS Trigger: GGATCCCACGTCCTCCAGCAAGCTGGGACCAAACAA...CACACACTGCAGCTGTTGAGTGGGTGGGAGGACTTCACAATCTCTTTCTGACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CAA 90 bp | TACCAACTTGGAGGCCCTGAGAGTGGCGGATTGCAGATGACTAGAGTCAGAAAGGCAGAGACTAAGATGTaGGCAGCCCTCAGGTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: YQLGGPESGGLQMTRVRKAETKM*AALRSR Trigger: CCGAGACCTGAGGGCTGCCAACATCTTAGTCTCTGC...CTTTCTGACTCTAGTCATCTGCAATCCGCCACTCTCAGGGCCTCCAAGTTGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CAA 90 bp | AAAGAGATTGTGAAGTCCTCCCACCCACTCAACAGCTGCAGTGTGTGTGGTGTGGCAGAGACTAAGATGTaGGCAGCCCTCAGGTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: KEIVKSSHPLNSCSVCGVAETKM*AALRSR Trigger: CCGAGACCTGAGGGCTGCCAACATCTTAGTCTCTGC...CACACCACACACACTGCAGCTGTTGAGTGGGTGGGAGGACTTCACAATCTCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CAA 90 bp | TTCAGTCATTCCAGGCAAATGAGACATACCAACTTGGAGGCCCTGAGAGTGGCGCACTTGATGGGGAACTaGGCTCCTTCCCGAGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: FSHSRQMRHTNLEALRVAHLMGN*APSRAV Trigger: CACAGCTCGGGAAGGAGCCAAGTTCCCCATCAAGTG...CGCCACTCTCAGGGCCTCCAAGTTGGTATGTCTCATTTGCCTGGAATGACTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CAA 90 bp | TACCAACTTGGAGGCCCTGAGAGTGGCGGATTGCAGATGACTAGAGTCAGAAAGCACTTGATGGGGAACTaGGCTCCTTCCCGAGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: YQLGGPESGGLQMTRVRKHLMGN*APSRAV Trigger: CACAGCTCGGGAAGGAGCCAAGTTCCCCATCAAGTG...CTTTCTGACTCTAGTCATCTGCAATCCGCCACTCTCAGGGCCTCCAAGTTGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CAA 90 bp | TCAACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGGTGAAGGAACCAAAGTaGATGGCTTCAGGAGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: STAAVCVVWCLRVGPASWVKEPK*MASGAV Trigger: GACAGCTCCTGAAGCCATCAACTTTGGTTCCTTCAC...CCAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCTGTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CAA 90 bp | CTCAACAGCTGCAGTGTGTGTGGTGTGGTGTCTGAGAGTGGGCCCAGCAAGTTGGTGAAGGAACCAAAGTaGATGGCTTCAGGAGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LNSCSVCGVVSESGPSKLVKEPK*MASGAV Trigger: GACAGCTCCTGAAGCCATCAACTTTGGTTCCTTCAC...CAACTTGCTGGGCCCACTCTCAGACACCACACCACACACACTGCAGCTGTTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CAA 90 bp | AAAGAGATTGTGAAGTCCTCCCACCCACTCAACAGCTGCAGTGTGTGTGGTGTGGGCATGCTGTTGCTGTaGTTTGGTCCCAGCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KEIVKSSHPLNSCSVCGVGMLLL*FGPSLL Trigger: CAGCAAGCTGGGACCAAACAACAGCAACAGCATGCC...CACACCACACACACTGCAGCTGTTGAGTGGGTGGGAGGACTTCACAATCTCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CAA 90 bp | TTCAGTCATTCCAGGCAAATGAGACATACCAACTTGGAGGCCCTGAGAGTGGCGTCCAGCAGGCTTCCTTaGGCCATGAACTCCGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: FSHSRQMRHTNLEALRVASSRLP*AMNSVT Trigger: TGTCACGGAGTTCATGGCCAAAGGAAGCCTGCTGGA...CGCCACTCTCAGGGCCTCCAAGTTGGTATGTCTCATTTGCCTGGAATGACTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CAA 90 bp | AAAGAGATTGTGAAGTCCTCCCACCCACTCAACAGCTGCAGTGTGTGTGGTGTGTTCCGGCTGATCCCCTaGAAGAACCACTCTTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: KEIVKSSHPLNSCSVCGVFRLIP*KNHSSV Trigger: GACAGAAGAGTGGTTCTTCAAGGGGATCAGCCGGAA...CACACCACACACACTGCAGCTGTTGAGTGGGTGGGAGGACTTCACAATCTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CAA 90 bp | TCATTCCAGGCAAATGAGACATACCAACTTGGAGGCCCTGAGAGTGGCGGATTGTTCCGGCTGATCCCCTaGAAGAACCACTCTTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SFQANETYQLGGPESGGLFRLIP*KNHSSV Trigger: GACAGAAGAGTGGTTCTTCAAGGGGATCAGCCGGAA...CAATCCGCCACTCTCAGGGCCTCCAAGTTGGTATGTCTCATTTGCCTGGAATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CAA 90 bp | TCATTCCAGGCAAATGAGACATACCAACTTGGAGGCCCTGAGAGTGGCGGATTGCGAGCTGTGTACTCATaGTCCTCGATGATTCGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SFQANETYQLGGPESGGLRAVYS*SSMIRA Trigger: GGCACGAATCATCGAGGACAATGAGTACACAGCTCG...CAATCCGCCACTCTCAGGGCCTCCAAGTTGGTATGTCTCATTTGCCTGGAATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CAA 90 bp | AAAGAGATTGTGAAGTCCTCCCACCCACTCAACAGCTGCAGTGTGTGTGGTGTGCGAGCTGTGTACTCATaGTCCTCGATGATTCGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: KEIVKSSHPLNSCSVCGVRAVYS*SSMIRA Trigger: GGCACGAATCATCGAGGACAATGAGTACACAGCTCG...CACACCACACACACTGCAGCTGTTGAGTGGGTGGGAGGACTTCACAATCTCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CAA 90 bp | GAGTCAGAAAGAGATTGTGAAGTCCTCCCACCCACTCAACAGCTGCAGTGTGTGCACTTGGCTCTGTTTTaGAGGCCTTGCTTCCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: ESERDCEVLPPTQQLQCVHLALF*RPCFHL Trigger: GAGATGGAAGCAAGGCCTCAAAAACAGAGCCAAGTG...CACACACTGCAGCTGTTGAGTGGGTGGGAGGACTTCACAATCTCTTTCTGACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CAA 90 bp | TACCAACTTGGAGGCCCTGAGAGTGGCGGATTGCAGATGACTAGAGTCAGAAAGCCTTCTGATTGGCACTaGGCTCTGTTTTTGAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: YQLGGPESGGLQMTRVRKPSDWH*ALFLRP Trigger: AGGCCTCAAAAACAGAGCCAAGTGCCAATCAGAAGG...CTTTCTGACTCTAGTCATCTGCAATCCGCCACTCTCAGGGCCTCCAAGTTGGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CAA 90 bp | AAAGAGATTGTGAAGTCCTCCCACCCACTCAACAGCTGCAGTGTGTGTGGTGTGCTGCCTTCTTCACTCTaGAGAAAGTCCAGCAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: KEIVKSSHPLNSCSVCGVLPSSL*RKSSRL Trigger: AAGCCTGCTGGACTTTCTCAAGAGTGAAGAAGGCAG...CACACCACACACACTGCAGCTGTTGAGTGGGTGGGAGGACTTCACAATCTCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CAA 90 bp | GAGTCAGAAAGAGATTGTGAAGTCCTCCCACCCACTCAACAGCTGCAGTGTGTGCTGCCTTCTTCACTCTaGAGAAAGTCCAGCAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: ESERDCEVLPPTQQLQCVLPSSL*RKSSRL Trigger: AAGCCTGCTGGACTTTCTCAAGAGTGAAGAAGGCAG...CACACACTGCAGCTGTTGAGTGGGTGGGAGGACTTCACAATCTCTTTCTGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS-3UTR CAA 90 bp | ATTGAATTCAGTCATTCCAGGCAAATGAGACATACCAACTTGGAGGCCCTGAGACCTTCTGATTGGCACTaGGCTCTGTTTTTGAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: IEFSHSRQMRHTNLEALRPSDWH*ALFLRP Trigger: AGGCCTCAAAAACAGAGCCAAGTGCCAATCAGAAGG...TCTCAGGGCCTCCAAGTTGGTATGTCTCATTTGCCTGGAATGACTGAATTCAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS CCA 72 bp | CACGCATCCCATCCTGGGCGCCCGCCCTTCGCTTCGTaGGCAGCCCGGATCCTCGCAGCTAGACCGACCCCC | + |
|
Preference number: 6 (lower is better) Translates to: HASHPGRPPFAS*AARILAARPTP Trigger: GGGGGTCGGTCTAGCTGCGAGGATCCGGGCTGCCCACGAAGCGAAGGGCGGGCGCCCAGGATGGGATGCGTG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003370.14 |
||
| CDS CCA 72 bp | CATCTCGGAGGAACCTGGACTTCACGCATCCCATCCTaGGCGCCCGCCCTTCGCTTCGTGGGCAGCCCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: HLGGTWTSRIPS*APALRFVGSPD Trigger: ATCCGGGCTGCCCACGAAGCGAAGGGCGGGCGCCCAGGATGGGATGCGTGAAGTCCAGGTTCCTCCGAGATG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003370.14 |
||
| CDS CCA 72 bp | ACTGTCCCGGATCATGAAGGAGCCCAGCATGTTGCCTaGAGCCAGGAGGTGGCGCTCTGCATCCTTCCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: TVPDHEGAQHVA*SQEVALCILPA Trigger: AGCCGGAAGGATGCAGAGCGCCACCTCCTGGCTCCAGGCAACATGCTGGGCTCCTTCATGATCCGGGACAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS GCA 72 bp | CTGGGGGCATGCTGTTGCTGTTGTTTGGTCCCAGCTTaGTGGAGGACGTGGGATCCGGCACATACACAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LGACCCCCLVPA*WRTWDPAHTQG Trigger: GCCCTGTGTATGTGCCGGATCCCACGTCCTCCAGCAAGCTGGGACCAAACAACAGCAACAGCATGCCCCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS CCA 72 bp | GGGGCATGCTGTTGCTGTTGTTTGGTCCCAGCTTGCTaGAGGACGTGGGATCCGGCACATACACAGGGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: GACCCCCLVPAC*RTWDPAHTQGP Trigger: AGGGCCCTGTGTATGTGCCGGATCCCACGTCCTCCAGCAAGCTGGGACCAAACAACAGCAACAGCATGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS CCA 72 bp | CTCCACAAACCCTGGGGGCATGCTGTTGCTGTTGTTTaGTCCCAGCTTGCTGGAGGACGTGGGATCCGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LHKPWGHAVAVV*SQLAGGRGIRH Trigger: GTGCCGGATCCCACGTCCTCCAGCAAGCTGGGACCAAACAACAGCAACAGCATGCCCCCAGGGTTTGTGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS CAA 72 bp | CCTGGGGGCATGCTGTTGCTGTTGTTTGGTCCCAGCTaGCTGGAGGACGTGGGATCCGGCACATACACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PGGMLLLLFGPS*LEDVGSGTYTG Trigger: CCCTGTGTATGTGCCGGATCCCACGTCCTCCAGCAAGCTGGGACCAAACAACAGCAACAGCATGCCCCCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS CAA 72 bp | CCTCCACAAACCCTGGGGGCATGCTGTTGCTGTTGTTaGGTCCCAGCTTGCTGGAGGACGTGGGATCCGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PPQTLGACCCCC*VPACWRTWDPA Trigger: TGCCGGATCCCACGTCCTCCAGCAAGCTGGGACCAAACAACAGCAACAGCATGCCCCCAGGGTTTGTGGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS CAA 90 bp | CCTCAGAGCCCTCCACAAACCCTGGGGGCATGCTGTTGCTGTTGTTaGGTCCCAGCTTGCTGGAGGACGTGGGATCCGGCACATACACAG | + |
|
Preference number: 6 (lower is better) Translates to: PQSPPQTLGACCCCC*VPACWRTWDPAHTQ Trigger: CTGTGTATGTGCCGGATCCCACGTCCTCCAGCAAGCTGGGACCAAACAACAGCAACAGCATGCCCCCAGGGTTTGTGGAGGGCTCTGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS CAA 90 bp | GTATCCTCAGAGCCCTCCACAAACCCTGGGGGCATGCTGTTGCTGTaGTTTGGTCCCAGCTTGCTGGAGGACGTGGGATCCGGCACATAC | + |
|
Preference number: 6 (lower is better) Translates to: VSSEPSTNPGGMLLL*FGPSLLEDVGSGTY Trigger: GTATGTGCCGGATCCCACGTCCTCCAGCAAGCTGGGACCAAACAACAGCAACAGCATGCCCCCAGGGTTTGTGGAGGGCTCTGAGGATAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS GCA 72 bp | TGGTATCCTCAGAGCCCTCCACAAACCCTGGGGGCATaGTGTTGCTGTTGTTTGGTCCCAGCTTGCTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: WYPQSPPQTLGA*CCCCLVPACWR Trigger: CCTCCAGCAAGCTGGGACCAAACAACAGCAACAGCATGCCCCCAGGGTTTGTGGAGGGCTCTGAGGATACCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS CAA 90 bp | CCTGGAGCCAGGAGGTGGCGCTCTGCATCCTTCCGGCTGATCCCCTaGAAGAACCACTCTTCTGTCTCCAAAGAGTTAACTCGAGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: PGARRWRSASFRLIP*KNHSSVSKELTRAT Trigger: TGTGGCTCGAGTTAACTCTTTGGAGACAGAAGAGTGGTTCTTCAAGGGGATCAGCCGGAAGGATGCAGAGCGCCACCTCCTGGCTCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS TCA 72 bp | GAGGACGTGGGATCCGGCACATACACAGGGCCCTTCTaGTTGGCACTTGGCTCTGTTTTTGAGGCCTTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: EDVGSGTYTGPF*LALGSVFEALL Trigger: AAGCAAGGCCTCAAAAACAGAGCCAAGTGCCAATCAGAAGGGCCCTGTGTATGTGCCGGATCCCACGTCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS CCA 72 bp | GACCACAATGGTATCCTCAGAGCCCTCCACAAACCCTaGGGGCATGCTGTTGCTGTTGTTTGGTCCCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: DHNGILRALHKP*GHAVAVVWSQL Trigger: AAGCTGGGACCAAACAACAGCAACAGCATGCCCCCAGGGTTTGTGGAGGGCTCTGAGGATACCATTGTGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
||
| CDS TCA 72 bp | CACAGGGCCCTTCTGATTGGCACTTGGCTCTGTTTTTaGGGCCTTGCTTCCATCTCGGAGGAACCTGGACTT | + |
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Preference number: 6 (lower is better) Translates to: HRALLIGTWLCF*GLASISEEPGL Trigger: AAGTCCAGGTTCCTCCGAGATGGAAGCAAGGCCTCAAAAACAGAGCCAAGTGCCAATCAGAAGGGCCCTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS CCA 72 bp | ACGTGGGATCCGGCACATACACAGGGCCCTTCTGATTaGCACTTGGCTCTGTTTTTGAGGCCTTGCTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: TWDPAHTQGPSD*HLALFLRPCFH Trigger: ATGGAAGCAAGGCCTCAAAAACAGAGCCAAGTGCCAATCAGAAGGGCCCTGTGTATGTGCCGGATCCCACGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS CAA 72 bp | ACACAGGGCCCTTCTGATTGGCACTTGGCTCTGTTTTaGAGGCCTTGCTTCCATCTCGGAGGAACCTGGACT | + |
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Preference number: 6 (lower is better) Translates to: TQGPSDWHLALF*RPCFHLGGTWT Trigger: AGTCCAGGTTCCTCCGAGATGGAAGCAAGGCCTCAAAAACAGAGCCAAGTGCCAATCAGAAGGGCCCTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS CAA 72 bp | GATCCGGCACATACACAGGGCCCTTCTGATTGGCACTaGGCTCTGTTTTTGAGGCCTTGCTTCCATCTCGGA | + |
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Preference number: 6 (lower is better) Translates to: DPAHTQGPSDWH*ALFLRPCFHLG Trigger: TCCGAGATGGAAGCAAGGCCTCAAAAACAGAGCCAAGTGCCAATCAGAAGGGCCCTGTGTATGTGCCGGATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS CAA 72 bp | AGGAGGTGGCGCTCTGCATCCTTCCGGCTGATCCCCTaGAAGAACCACTCTTCTGTCTCCAAAGAGTTAACT | + |
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Preference number: 6 (lower is better) Translates to: RRWRSASFRLIP*KNHSSVSKELT Trigger: AGTTAACTCTTTGGAGACAGAAGAGTGGTTCTTCAAGGGGATCAGCCGGAAGGATGCAGAGCGCCACCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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| CDS GCA 72 bp | GAGGTCTTCACGGTGAATAGCCTCATAGTCGTACAGTaGGACCACAATGGTATCCTCAGAGCCCTCCACAAA | + |
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Preference number: 6 (lower is better) Translates to: EVFTVNSLIVVQ*DHNGILRALHK Trigger: TTTGTGGAGGGCTCTGAGGATACCATTGTGGTCGCACTGTACGACTATGAGGCTATTCACCGTGAAGACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003370.14 ENSMUST00000109799.8 ENSMUST00000189688.2 |
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