Pregenerated sensors for HCFC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020246Ensembl transcript IDs: ENSMUST00000020478.14, ENSMUST00000160681.2, ENSMUST00000162422.2
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCACAGCTACTCAGTCGTCCTACACTGGCATGAGATCATGTCGCTaGAGAAGCGGACCTGTGCTTGTGCTAACTGCAGCCCTCGGCCTG | + |
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Preference number: 1 (lower is better) Translates to: GTATQSSYTGMRSCR*RSGPVLVLTAALGL Trigger: CAGGCCGAGGGCTGCAGTTAGCACAAGCACAGGTCCGCTTCTCCAGCGACATGATCTCATGCCAGTGTAGGACGACTGAGTAGCTGTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
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| 3UTR GCA 90 bp | AGCCTAGGTGCCCAGGCCCCAAGGTCAATCTCCAGTTCTCCAGCGTaGACACACACGCACACACACATGCACACACACACACACACACAC | + |
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Preference number: 1 (lower is better) Translates to: SLGAQAPRSISSSPA*THTHTHMHTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTGCATGTGTGTGTGCGTGTGTGTGCACGCTGGAGAACTGGAGATTGACCTTGGGGCCTGGGCACCTAGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
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| 3UTR CCA 90 bp | CATCACACGAAGGTTGGAGGGCACAGCTACTCAGTCGTCCTACACTaGCATGAGATCATGTCGCTGGAGAAGCGGACCTGTGCTTGTGCT | + |
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Preference number: 1 (lower is better) Translates to: HHTKVGGHSYSVVLH*HEIMSLEKRTCACA Trigger: AGCACAAGCACAGGTCCGCTTCTCCAGCGACATGATCTCATGCCAGTGTAGGACGACTGAGTAGCTGTGCCCTCCAACCTTCGTGTGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
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| 3UTR GCA 90 bp | GGTCAATCTCCAGTTCTCCAGCGTGCACACACACGCACACACACATaGACACACACACACACACACACACACACACACACACACATACAA | + |
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Preference number: 1 (lower is better) Translates to: GQSPVLQRAHTRTHT*THTHTHTHTHTHIQ Trigger: TTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATGTGTGTGTGCGTGTGTGTGCACGCTGGAGAACTGGAGATTGACC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
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| 3UTR CCA 90 bp | GAAGCTCTCCCCGTGGGAACCAAAGGCCTCCTTGTAAACACTGCTTaGACAGGACCCTTTGAATTAGGAAGATTCATGTACCCAAAAGGT | + |
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Preference number: 1 (lower is better) Translates to: EALPVGTKGLLVNTA*TGPFELGRFMYPKG Trigger: ACCTTTTGGGTACATGAATCTTCCTAATTCAAAGGGTCCTGTCCAAGCAGTGTTTACAAGGAGGCCTTTGGTTCCCACGGGGAGAGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
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| 3UTR CCA 90 bp | GCATATATATATCTATTAATTCTTCACAATCATATTCATCTACACTaGGCACATCACACGAAGGTTGGAGGGCACAGCTACTCAGTCGTC | + |
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Preference number: 1 (lower is better) Translates to: AYIYLLILHNHIHLH*AHHTKVGGHSYSVV Trigger: GACGACTGAGTAGCTGTGCCCTCCAACCTTCGTGTGATGTGCCCAGTGTAGATGAATATGATTGTGAAGAATTAATAGATATATATATGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
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| 3UTR TCA 90 bp | TTTTACTTATGTGAACCAAAGTCCAGAACACATGGAAGAGGCTTGTaGCACAAAGACAGCTATACAGCTTGGAGACAAAAGAAAGAAACT | + |
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Preference number: 1 (lower is better) Translates to: FYLCEPKSRTHGRGL*HKDSYTAWRQKKET Trigger: AGTTTCTTTCTTTTGTCTCCAAGCTGTATAGCTGTCTTTGTGTCACAAGCCTCTTCCATGTGTTCTGGACTTTGGTTCACATAAGTAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
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| 3UTR-3UTR TCA 90 bp | CCGGCGGGTACTCAGCCAGGGCATTTACAACATGGGAAACACCCACCACAGTGGTCAGTAGCCGCAGGATaGCTGAGTAAAAGAAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: PAGTQPGHLQHGKHPPQWSVAAG*LSKRKG Trigger: CCCTTTTCTTTTACTCAGTCATCCTGCGGCTACTGA...CCACTGTGGTGGGTGTTTCCCATGTTGTAAATGCCCTGGCTGAGTACCCGCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
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| 3UTR-3UTR TCA 90 bp | ATATTCATCTACACTGGGCACATCACACGAAGGTTGGAGGGCACAGCTACTCAGGCACTGAGAGATAGCTaGCAGAAGACCCCTGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: IFIYTGHITRRLEGTATQALRDS*QKTPAP Trigger: AGGAGCAGGGGTCTTCTGTCAGCTATCTCTCAGTGC...CTGAGTAGCTGTGCCCTCCAACCTTCGTGTGATGTGCCCAGTGTAGATGAATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
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| 3UTR-3UTR TCA 90 bp | CACACGAAGGTTGGAGGGCACAGCTACTCAGTCGTCCTACACTGGCATGAGATCCAGTCACTTCCTAACTaGCTAGCCAGCCAAATTATG | + |
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Preference number: 2 (lower is better) Translates to: HTKVGGHSYSVVLHWHEIQSLPN*LASQIM Trigger: CATAATTTGGCTGGCTAGTCAGTTAGGAAGTGACTG...GATCTCATGCCAGTGTAGGACGACTGAGTAGCTGTGCCCTCCAACCTTCGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
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| 3UTR-3UTR GCA 90 bp | ATATTCATCTACACTGGGCACATCACACGAAGGTTGGAGGGCACAGCTACTCAGCTGAAACGTCTCCTCTaGAGAGTCTGTTCTGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: IFIYTGHITRRLEGTATQLKRLL*RVCSVC Trigger: GCACACAGAACAGACTCTGCAGAGGAGACGTTTCAG...CTGAGTAGCTGTGCCCTCCAACCTTCGTGTGATGTGCCCAGTGTAGATGAATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
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| 3UTR-3UTR TCA 90 bp | CATCTCTTCCACTCCAAAAGTATAGTCGAGTGCCAATTGCAACAGCGCAGTGTCATAACACTGGCTGTATaGAGGCTTCGTGGAAGTGGC | + |
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Preference number: 2 (lower is better) Translates to: HLFHSKSIVECQLQQRSVITLAV*RLRGSG Trigger: GCCACTTCCACGAAGCCTTCATACAGCCAGTGTTAT...GACACTGCGCTGTTGCAATTGGCACTCGACTATACTTTTGGAGTGGAAGAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162422.2 |
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| 3UTR-3UTR CCA 90 bp | CACACGAAGGTTGGAGGGCACAGCTACTCAGTCGTCCTACACTGGCATGAGATCGATAAGGGAGTAAGGTaGCTACTAAACTTAGAATCG | + |
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Preference number: 2 (lower is better) Translates to: HTKVGGHSYSVVLHWHEIDKGVR*LLNLES Trigger: CGATTCTAAGTTTAGTAGCCACCTTACTCCCTTATC...GATCTCATGCCAGTGTAGGACGACTGAGTAGCTGTGCCCTCCAACCTTCGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
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| 3UTR CAA 90 bp | TTCTTCACAATCATATTCATCTACACTGGGCACATCACACGAAGGTaGGAGGGCACAGCTACTCAGTCGTCCTACACTGGCATGAGATCA | + |
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Preference number: 2 (lower is better) Translates to: FFTIIFIYTGHITRR*EGTATQSSYTGMRS Trigger: TGATCTCATGCCAGTGTAGGACGACTGAGTAGCTGTGCCCTCCAACCTTCGTGTGATGTGCCCAGTGTAGATGAATATGATTGTGAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCACAATCATATTCATCTACACTGGGCACATCACACGAAGGTTGGAGGGCACCAAAAGCAGAGTTGCTaGCCTAGCCTTTCTCTTTTA | + |
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Preference number: 2 (lower is better) Translates to: LHNHIHLHWAHHTKVGGHQKQSC*PSLSLL Trigger: TAAAAGAGAAAGGCTAGGTCAGCAACTCTGCTTTTG...GTGCCCTCCAACCTTCGTGTGATGTGCCCAGTGTAGATGAATATGATTGTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
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| 3UTR-3UTR GCA 90 bp | GACAAAAGAAAGAAACTTAACTTAGGTAAAATCCTCTTGGAAGAGTTATCTGCCCTGCTCTCACAGACATaGAGCTCTAGCACCATAGGA | + |
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Preference number: 2 (lower is better) Translates to: DKRKKLNLGKILLEELSALLSQT*SSSTIG Trigger: TCCTATGGTGCTAGAGCTGCATGTCTGTGAGAGCAG...GGCAGATAACTCTTCCAAGAGGATTTTACCTAAGTTAAGTTTCTTTCTTTTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
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| 3UTR-3UTR CCA 90 bp | GTCAGACACAAATCAAGACTGTCCACTATCCTTTTTATATTTTGCTGGGATTCTAGGGCATTTACAACATaGGAAACACCCACCACAGTG | + |
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Preference number: 2 (lower is better) Translates to: VRHKSRLSTILFIFCWDSRAFTT*ETPTTV Trigger: CACTGTGGTGGGTGTTTCCCATGTTGTAAATGCCCT...AGAATCCCAGCAAAATATAAAAAGGATAGTGGACAGTCTTGATTTGTGTCTGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCTCCCATGCAAACAGATTCTCTTAGTTCTTAAATACAGACTGAGTTTATATAAAGTCCAGAACACATaGAAGAGGCTTGTGACACAA | + |
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Preference number: 2 (lower is better) Translates to: CLPCKQILLVLKYRLSLYKVQNT*KRLVTQ Trigger: TTGTGTCACAAGCCTCTTCCATGTGTTCTGGACTTT...ATATAAACTCAGTCTGTATTTAAGAACTAAGAGAATCTGTTTGCATGGGAGGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
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| 3UTR-3UTR CAA 90 bp | ACTAGCCTAGGTGCCCAGGCCCCAAGGTCAATCTCCAGTTCTCCAGCGTGCACACCCCCGCTATGCATGTaGGCAGAACAGCTGCTCTCA | + |
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Preference number: 3 (lower is better) Translates to: TSLGAQAPRSISSSPACTPPLCM*AEQLLS Trigger: TGAGAGCAGCTGTTCTGCCAACATGCATAGCGGGGG...TGTGCACGCTGGAGAACTGGAGATTGACCTTGGGGCCTGGGCACCTAGGCTAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
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| 3UTR CCA 72 bp | AAGGCCGGCGGGTACTCAGCCAGGGCATTTACAACATaGGAAACACCCACCACAGTGGTGTACACCAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: KAGGYSARAFTT*ETPTTVVYTSQ Trigger: CTGGCTGGTGTACACCACTGTGGTGGGTGTTTCCCATGTTGTAAATGCCCTGGCTGAGTACCCGCCGGCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
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| 3UTR TCA 72 bp | TGGAGGGCACAGCTACTCAGTCGTCCTACACTGGCATaGGATCATGTCGCTGGAGAAGCGGACCTGTGCTTG | + |
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Preference number: 3 (lower is better) Translates to: WRAQLLSRPTLA*DHVAGEADLCL Trigger: CAAGCACAGGTCCGCTTCTCCAGCGACATGATCTCATGCCAGTGTAGGACGACTGAGTAGCTGTGCCCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
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| 3UTR CCA 72 bp | AAGGTTGGAGGGCACAGCTACTCAGTCGTCCTACACTaGCATGAGATCATGTCGCTGGAGAAGCGGACCTGT | + |
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Preference number: 3 (lower is better) Translates to: KVGGHSYSVVLH*HEIMSLEKRTC Trigger: ACAGGTCCGCTTCTCCAGCGACATGATCTCATGCCAGTGTAGGACGACTGAGTAGCTGTGCCCTCCAACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
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| 3UTR GCA 72 bp | GTGCTAACTGCAGCCCTCGGCCTGAAACGTCTCCTCTaGAGAGTCTGTTCTGTGTGCAGTCACTTCCTAACT | + |
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Preference number: 3 (lower is better) Translates to: VLTAALGLKRLL*RVCSVCSHFLT Trigger: AGTTAGGAAGTGACTGCACACAGAACAGACTCTGCAGAGGAGACGTTTCAGGCCGAGGGCTGCAGTTAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
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| 3UTR CCA 72 bp | TCATATTCATCTACACTGGGCACATCACACGAAGGTTaGAGGGCACAGCTACTCAGTCGTCCTACACTGGCA | + |
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Preference number: 3 (lower is better) Translates to: SYSSTLGTSHEG*RAQLLSRPTLA Trigger: TGCCAGTGTAGGACGACTGAGTAGCTGTGCCCTCCAACCTTCGTGTGATGTGCCCAGTGTAGATGAATATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
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| 3UTR GCA 72 bp | TGTAGCCATCTCTTCCACTCCAAAAGTATAGTCGAGTaGCAATTGCAACAGCGCAGTGTCCTGCTCTTGGTC | + |
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Preference number: 3 (lower is better) Translates to: CSHLFHSKSIVE*QLQQRSVLLLV Trigger: GACCAAGAGCAGGACACTGCGCTGTTGCAATTGGCACTCGACTATACTTTTGGAGTGGAAGAGATGGCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162422.2 |
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| 3UTR CCA 72 bp | CCAGGGCATTTACAACATGGGAAACACCCACCACAGTaGTGTACACCAGCCAGTACTAAACTCATCTCAGTA | + |
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Preference number: 3 (lower is better) Translates to: PGHLQHGKHPPQ*CTPASTKLISV Trigger: TACTGAGATGAGTTTAGTACTGGCTGGTGTACACCACTGTGGTGGGTGTTTCCCATGTTGTAAATGCCCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
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| 3UTR CCA 72 bp | CCCGTGGGAACCAAAGGCCTCCTTGTAAACACTGCTTaGACAGGACCCTTTGAATTAGGAAGATTCATGTAC | + |
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Preference number: 3 (lower is better) Translates to: PVGTKGLLVNTA*TGPFELGRFMY Trigger: GTACATGAATCTTCCTAATTCAAAGGGTCCTGTCCAAGCAGTGTTTACAAGGAGGCCTTTGGTTCCCACGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
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| 3UTR GCA 72 bp | CTATGCATGTTGGCAGAACAGCTGCTCTCACAGACATaGAGCTCTAGCACCATAGGAATTGCTAACAGCAAA | + |
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Preference number: 3 (lower is better) Translates to: LCMLAEQLLSQT*SSSTIGIANSK Trigger: TTTGCTGTTAGCAATTCCTATGGTGCTAGAGCTGCATGTCTGTGAGAGCAGCTGTTCTGCCAACATGCATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
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| 3UTR TCA 72 bp | TGTGAACCAAAGTCCAGAACACATGGAAGAGGCTTGTaGCACAAAGACAGCTATACAGCTTGGAGACAAAAG | + |
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Preference number: 3 (lower is better) Translates to: CEPKSRTHGRGL*HKDSYTAWRQK Trigger: CTTTTGTCTCCAAGCTGTATAGCTGTCTTTGTGTCACAAGCCTCTTCCATGTGTTCTGGACTTTGGTTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
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| 3UTR CCA 72 bp | AACTTAGGTAAAATCCTCTTGGAAGAGTTATCTGCCTaGGCTGTGGTGTTGCTTGCTATTAGAACACTAGCC | + |
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Preference number: 3 (lower is better) Translates to: NLGKILLEELSA*AVVLLAIRTLA Trigger: GGCTAGTGTTCTAATAGCAAGCAACACCACAGCCCAGGCAGATAACTCTTCCAAGAGGATTTTACCTAAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
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| 3UTR CCA 72 bp | TATCTATTAATTCTTCACAATCATATTCATCTACACTaGGCACATCACACGAAGGTTGGAGGGCACAGCTAC | + |
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Preference number: 3 (lower is better) Translates to: YLLILHNHIHLH*AHHTKVGGHSY Trigger: GTAGCTGTGCCCTCCAACCTTCGTGTGATGTGCCCAGTGTAGATGAATATGATTGTGAAGAATTAATAGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
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| 3UTR CCA 72 bp | CTTAAGCTTGTGATAACTGAAGATAAGGGAGTAAGGTaGCTACTAAACTTAGAATCGAAGATCCTCTGCACT | + |
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Preference number: 3 (lower is better) Translates to: LKLVITEDKGVR*LLNLESKILCT Trigger: AGTGCAGAGGATCTTCGATTCTAAGTTTAGTAGCCACCTTACTCCCTTATCTTCAGTTATCACAAGCTTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
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| 3UTR GCA 72 bp | CACATATACAGCAAAGCCTACTTACTAGTCCATATGTaGAAATCTGCATCCCATGTAACTTTGGTTAAGACA | + |
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Preference number: 3 (lower is better) Translates to: HIYSKAYLLVHM*KSASHVTLVKT Trigger: TGTCTTAACCAAAGTTACATGGGATGCAGATTTGCACATATGGACTAGTAAGTAGGCTTTGCTGTATATGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
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| CDS-3UTR GCA 90 bp | CCCAGGCCCCAAGGTCAATCTCCAGTTCTCCAGCGTGCACACACACGCACACACACGGCTCGGTGTCCGTaGCGGGCGCGAGGCACCGGT | + |
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Preference number: 4 (lower is better) Translates to: PRPQGQSPVLQRAHTRTHTARCP*RARGTG Trigger: ACCGGTGCCTCGCGCCCGGCACGGACACCGAGCCGT...GTGTGTGCGTGTGTGTGCACGCTGGAGAACTGGAGATTGACCTTGGGGCCTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
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| CDS-3UTR TCA 90 bp | CCCAGGCCCCAAGGTCAATCTCCAGTTCTCCAGCGTGCACACACACGCACACACAAACCCGCCTCCAGTTaGGGAGGCTGGGAGCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: PRPQGQSPVLQRAHTRTHKPASS*GGWEPP Trigger: TGGCGGCTCCCAGCCTCCTCAACTGGAGGCGGGTTT...GTGTGTGCGTGTGTGTGCACGCTGGAGAACTGGAGATTGACCTTGGGGCCTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
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| CDS-3UTR GCA 90 bp | CCCAGGCCCCAAGGTCAATCTCCAGTTCTCCAGCGTGCACACACACGCACACACGGCGTTGCTGCAGCATaGACCTCTACACGGCTGATC | + |
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Preference number: 4 (lower is better) Translates to: PRPQGQSPVLQRAHTRTHGVAAA*TSTRLI Trigger: GATCAGCCGTGTAGAGGTGCATGCTGCAGCAACGCC...GTGTGTGCGTGTGTGTGCACGCTGGAGAACTGGAGATTGACCTTGGGGCCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
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| CDS-3UTR TCA 90 bp | GTCGAGTGCCAATTGCAACAGCGCAGTGTCCTGCTCTTGGTCTTGGCCTTGAATTGCCCCCGCCGAAGATaGTCATCAGCTCCCGGATGG | + |
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Preference number: 4 (lower is better) Translates to: VECQLQQRSVLLLVLALNCPRRR*SSAPGW Trigger: CCATCCGGGAGCTGATGATCATCTTCGGCGGGGGCA...ATTCAAGGCCAAGACCAAGAGCAGGACACTGCGCTGTTGCAATTGGCACTCGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162422.2 |
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| CDS-3UTR GCA 90 bp | ACTAGCCTAGGTGCCCAGGCCCCAAGGTCAATCTCCAGTTCTCCAGCGTGCACAGACAAATCCATGGGCTaGACAGCCTGGAGGGATGTC | + |
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Preference number: 4 (lower is better) Translates to: TSLGAQAPRSISSSPACTDKSMG*TAWRDV Trigger: GACATCCCTCCAGGCTGTGCAGCCCATGGATTTGTC...TGTGCACGCTGGAGAACTGGAGATTGACCTTGGGGCCTGGGCACCTAGGCTAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
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| CDS-3UTR CCA 90 bp | TATAGTCGAGTGCCAATTGCAACAGCGCAGTGTCCTGCTCTTGGTCTTGGCCTTTCATCAGCTCCCGGATaGCCACGGCTCGGTGTCCGT | + |
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Preference number: 4 (lower is better) Translates to: YSRVPIATAQCPALGLGLSSAPG*PRLGVR Trigger: ACGGACACCGAGCCGTGGCCATCCGGGAGCTGATGA...AAGGCCAAGACCAAGAGCAGGACACTGCGCTGTTGCAATTGGCACTCGACTATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162422.2 |
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| CDS-3UTR GCA 90 bp | CTAGGTGCCCAGGCCCCAAGGTCAATCTCCAGTTCTCCAGCGTGCACACACACGATCACACCACTGCTCTaGTTTCAAAATGGCCACTGG | + |
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Preference number: 4 (lower is better) Translates to: LGAQAPRSISSSPACTHTITPLL*FQNGHW Trigger: CCAGTGGCCATTTTGAAAGCAGAGCAGTGGTGTGAT...CGTGTGTGTGCACGCTGGAGAACTGGAGATTGACCTTGGGGCCTGGGCACCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
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| CDS-3UTR GCA 90 bp | CTAGGTGCCCAGGCCCCAAGGTCAATCTCCAGTTCTCCAGCGTGCACACACACGATCAATATGTGCATTTaGAAGCTGCCCAGCAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: LGAQAPRSISSSPACTHTINMCI*KLPSSH Trigger: GTGACTGCTGGGCAGCTTGCAAATGCACATATTGAT...CGTGTGTGTGCACGCTGGAGAACTGGAGATTGACCTTGGGGCCTGGGCACCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
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| CDS-3UTR GCA 90 bp | TATAGTCGAGTGCCAATTGCAACAGCGCAGTGTCCTGCTCTTGGTCTTGGCCTTGACAAATCCATGGGCTaGACAGCCTGGAGGGATGTC | + |
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Preference number: 4 (lower is better) Translates to: YSRVPIATAQCPALGLGLDKSMG*TAWRDV Trigger: GACATCCCTCCAGGCTGTGCAGCCCATGGATTTGTC...AAGGCCAAGACCAAGAGCAGGACACTGCGCTGTTGCAATTGGCACTCGACTATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162422.2 |
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| CDS-3UTR GCA 90 bp | ATATTCATCTACACTGGGCACATCACACGAAGGTTGGAGGGCACAGCTACTCAGGGCGTTGCTGCAGCATaGACCTCTACACGGCTGATC | + |
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Preference number: 4 (lower is better) Translates to: IFIYTGHITRRLEGTATQGVAAA*TSTRLI Trigger: GATCAGCCGTGTAGAGGTGCATGCTGCAGCAACGCC...CTGAGTAGCTGTGCCCTCCAACCTTCGTGTGATGTGCCCAGTGTAGATGAATAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
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| CDS-3UTR TCA 90 bp | CTTAACTTAGGTAAAATCCTCTTGGAAGAGTTATCTGCCTGGGCTGTGGTGTTGTGCCCCCGCCGAAGATaGTCATCAGCTCCCGGATGG | + |
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Preference number: 4 (lower is better) Translates to: LNLGKILLEELSAWAVVLCPRRR*SSAPGW Trigger: CCATCCGGGAGCTGATGATCATCTTCGGCGGGGGCA...CAACACCACAGCCCAGGCAGATAACTCTTCCAAGAGGATTTTACCTAAGTTAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
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| CDS-3UTR TCA 90 bp | CTATGCATGTTGGCAGAACAGCTGCTCTCACAGACATGCAGCTCTAGCACCATACACACTTGGCGCTGCTaGAGAGTCAGACGATGTAGC | + |
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Preference number: 4 (lower is better) Translates to: LCMLAEQLLSQTCSSSTIHTWRC*RVRRCS Trigger: GCTACATCGTCTGACTCTTCAGCAGCGCCAAGTGTG...TATGGTGCTAGAGCTGCATGTCTGTGAGAGCAGCTGTTCTGCCAACATGCATAG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
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| CDS-3UTR GCA 90 bp | CCGGCGGGTACTCAGCCAGGGCATTTACAACATGGGAAACACCCACCACAGTGGTGTGTAATCAATATGTaGATTTGCAAGCTGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: PAGTQPGHLQHGKHPPQWCVINM*ICKLPS Trigger: GCTGGGCAGCTTGCAAATGCACATATTGATTACACA...CCACTGTGGTGGGTGTTTCCCATGTTGTAAATGCCCTGGCTGAGTACCCGCCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
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| CDS-3UTR CCA 90 bp | CTTAACTTAGGTAAAATCCTCTTGGAAGAGTTATCTGCCTGGGCTGTGGTGTTGGCACAACGCCTTTGGTaGCTGGGATGCTCCAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: LNLGKILLEELSAWAVVLAQRLW*LGCSSP Trigger: TGGGCTGGAGCATCCCAGCCACCAAAGGCGTTGTGC...CAACACCACAGCCCAGGCAGATAACTCTTCCAAGAGGATTTTACCTAAGTTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
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| 3UTR CAA 72 bp | ATCATATTCATCTACACTGGGCACATCACACGAAGGTaGGAGGGCACAGCTACTCAGTCGTCCTACACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: IIFIYTGHITRR*EGTATQSSYTG Trigger: GCCAGTGTAGGACGACTGAGTAGCTGTGCCCTCCAACCTTCGTGTGATGTGCCCAGTGTAGATGAATATGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
||
| CDS-3UTR TCA 90 bp | CTATGCATGTTGGCAGAACAGCTGCTCTCACAGACATGCAGCTCTAGCACCATAATAACACTGGCTGTATaGAGGCTTCGTGGAAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LCMLAEQLLSQTCSSSTIITLAV*RLRGSG Trigger: GCCACTTCCACGAAGCCTTCATACAGCCAGTGTTAT...TATGGTGCTAGAGCTGCATGTCTGTGAGAGCAGCTGTTCTGCCAACATGCATAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR TCA 90 bp | CAGCTGCTCTCACAGACATGCAGCTCTAGCACCATAGGAATTGCTAACAGCAAAAGGCTTGCTTCTCAGTaGAGTTCCTCTCACAGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: QLLSQTCSSSTIGIANSKRLASQ*SSSHSR Trigger: ACGGCTGTGAGAGGAACTTCACTGAGAAGCAAGCCT...TTTGCTGTTAGCAATTCCTATGGTGCTAGAGCTGCATGTCTGTGAGAGCAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR TCA 90 bp | CTTAACTTAGGTAAAATCCTCTTGGAAGAGTTATCTGCCTGGGCTGTGGTGTTGGTTGGGTGCCAATGGTaGATGCAGAGCGGCACTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LNLGKILLEELSAWAVVLVGCQW*MQSGTR Trigger: TCGAGTGCCGCTCTGCATTCACCATTGGCACCCAAC...CAACACCACAGCCCAGGCAGATAACTCTTCCAAGAGGATTTTACCTAAGTTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR TCA 90 bp | ATATTCATCTACACTGGGCACATCACACGAAGGTTGGAGGGCACAGCTACTCAGTCTTTGCGGATATTCTaGACACAATGGCGGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IFIYTGHITRRLEGTATQSLRIF*TQWRVW Trigger: CCAGACCCGCCATTGTGTTCAGAATATCCGCAAAGA...CTGAGTAGCTGTGCCCTCCAACCTTCGTGTGATGTGCCCAGTGTAGATGAATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
||
| CDS-3UTR GCA 90 bp | CTATGCATGTTGGCAGAACAGCTGCTCTCACAGACATGCAGCTCTAGCACCATAGAAGGGTGCTATTACTaGCTTGTCTGTGAGGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LCMLAEQLLSQTCSSSTIEGCYY*LVCEGP Trigger: TGGACCCTCACAGACAAGGCAGTAATAGCACCCTTC...TATGGTGCTAGAGCTGCATGTCTGTGAGAGCAGCTGTTCTGCCAACATGCATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR GCA 90 bp | GTACTCAGCCAGGGCATTTACAACATGGGAAACACCCACCACAGTGGTGTACACTGTGCATTTGCAAGCTaGCCAGCAGTCACTGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: VLSQGIYNMGNTHHSGVHCAFAS*PAVTVH Trigger: ATGTACAGTGACTGCTGGGCAGCTTGCAAATGCACA...GTGTACACCACTGTGGTGGGTGTTTCCCATGTTGTAAATGCCCTGGCTGAGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
||
| CDS-3UTR CCA 90 bp | CTAGGTGCCCAGGCCCCAAGGTCAATCTCCAGTTCTCCAGCGTGCACACACACGCTTATATACTGTTCCTaGAACAAGATCCTGTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LGAQAPRSISSSPACTHTLIYCS*NKILFL Trigger: AAGAAACAGGATCTTGTTCCAGGAACAGTATATAAG...CGTGTGTGTGCACGCTGGAGAACTGGAGATTGACCTTGGGGCCTGGGCACCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR TCA 90 bp | CTATGCATGTTGGCAGAACAGCTGCTCTCACAGACATGCAGCTCTAGCACCATATCTTTTTCCTGGTCTTaGAGCCATCGGACTTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LCMLAEQLLSQTCSSSTISFSWS*SHRTCV Trigger: CACACAAGTCCGATGGCTTCAAGACCAGGAAAAAGA...TATGGTGCTAGAGCTGCATGTCTGTGAGAGCAGCTGTTCTGCCAACATGCATAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR GCA 90 bp | GTACTCAGCCAGGGCATTTACAACATGGGAAACACCCACCACAGTGGTGTACACTGGCTTGGATTATCTTaGATCTGTGCTGTGCGGATA | + |
|
Preference number: 4 (lower is better) Translates to: VLSQGIYNMGNTHHSGVHWLGLS*ICAVRI Trigger: TATCCGCACAGCACAGATGCAAGATAATCCAAGCCA...GTGTACACCACTGTGGTGGGTGTTTCCCATGTTGTAAATGCCCTGGCTGAGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
||
| CDS-3UTR CCA 90 bp | CTATGCATGTTGGCAGAACAGCTGCTCTCACAGACATGCAGCTCTAGCACCATAAAGGCTTCGTGGAAGTaGCACTGTCCCTTTAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LCMLAEQLLSQTCSSSTIKASWK*HCPFSF Trigger: GAAACTAAAGGGACAGTGCCACTTCCACGAAGCCTT...TATGGTGCTAGAGCTGCATGTCTGTGAGAGCAGCTGTTCTGCCAACATGCATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR CCA 90 bp | GTACTCAGCCAGGGCATTTACAACATGGGAAACACCCACCACAGTGGTGTACACGCTCTGCTTTCAAAATaGCCACTGGATTTGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VLSQGIYNMGNTHHSGVHALLSK*PLDLKV Trigger: CACCTTCAAATCCAGTGGCCATTTTGAAAGCAGAGC...GTGTACACCACTGTGGTGGGTGTTTCCCATGTTGTAAATGCCCTGGCTGAGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
||
| CDS-3UTR CCA 90 bp | CTATGCATGTTGGCAGAACAGCTGCTCTCACAGACATGCAGCTCTAGCACCATATCAGACGATGTAGCTTaGTACGTCAGGTCAGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: LCMLAEQLLSQTCSSSTISDDVA*YVRSVF Trigger: GAATACTGACCTGACGTACCAAGCTACATCGTCTGA...TATGGTGCTAGAGCTGCATGTCTGTGAGAGCAGCTGTTCTGCCAACATGCATAG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR GCA 90 bp | CTATGCATGTTGGCAGAACAGCTGCTCTCACAGACATGCAGCTCTAGCACCATAAAAAGTATAGTCGAGTaGCAATTGCAACAGCGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LCMLAEQLLSQTCSSSTIKSIVE*QLQQRS Trigger: ACTGCGCTGTTGCAATTGGCACTCGACTATACTTTT...TATGGTGCTAGAGCTGCATGTCTGTGAGAGCAGCTGTTCTGCCAACATGCATAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR GCA 90 bp | CTATGCATGTTGGCAGAACAGCTGCTCTCACAGACATGCAGCTCTAGCACCATAGATACCAAAGGTCCTTaGAGCAGACCTGACTATTTA | + |
|
Preference number: 4 (lower is better) Translates to: LCMLAEQLLSQTCSSSTIDTKGP*SRPDYL Trigger: TAAATAGTCAGGTCTGCTGCAAGGACCTTTGGTATC...TATGGTGCTAGAGCTGCATGTCTGTGAGAGCAGCTGTTCTGCCAACATGCATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR GCA 90 bp | AACCTAGGTCCTATTAGACACGTGACAGTGTTCAGGGATATAGCCAGCTCCCAAATCAATATGTGCATTTaGAAGCTGCCCAGCAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: NLGPIRHVTVFRDIASSQINMCI*KLPSSH Trigger: GTGACTGCTGGGCAGCTTGCAAATGCACATATTGAT...TTGGGAGCTGGCTATATCCCTGAACACTGTCACGTGTCTAATAGGACCTAGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
||
| CDS-3UTR CCA 90 bp | TGCCTCCCATGCAAACAGATTCTCTTAGTTCTTAAATACAGACTGAGTTTATATTCATCAGCTCCCGGATaGCCACGGCTCGGTGTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: CLPCKQILLVLKYRLSLYSSAPG*PRLGVR Trigger: ACGGACACCGAGCCGTGGCCATCCGGGAGCTGATGA...ATATAAACTCAGTCTGTATTTAAGAACTAAGAGAATCTGTTTGCATGGGAGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR GCA 90 bp | CTTAACTTAGGTAAAATCCTCTTGGAAGAGTTATCTGCCTGGGCTGTGGTGTTGTGTGCATTTGCAAGCTaGCCAGCAGTCACTGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: LNLGKILLEELSAWAVVLCAFAS*PAVTVH Trigger: ATGTACAGTGACTGCTGGGCAGCTTGCAAATGCACA...CAACACCACAGCCCAGGCAGATAACTCTTCCAAGAGGATTTTACCTAAGTTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR CCA 90 bp | GAGGCTTGTGACACAAAGACAGCTATACAGCTTGGAGACAAAAGAAAGAAACTTCTCCACTCACAGTCATaGGGGGAAGTCTCAGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: EACDTKTAIQLGDKRKKLLHSQS*GEVSGF Trigger: AAATCCTGAGACTTCCCCCCATGACTGTGAGTGGAG...AAGTTTCTTTCTTTTGTCTCCAAGCTGTATAGCTGTCTTTGTGTCACAAGCCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR CCA 90 bp | CTTAACTTAGGTAAAATCCTCTTGGAAGAGTTATCTGCCTGGGCTGTGGTGTTGGCTCTGCTTTCAAAATaGCCACTGGATTTGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LNLGKILLEELSAWAVVLALLSK*PLDLKV Trigger: CACCTTCAAATCCAGTGGCCATTTTGAAAGCAGAGC...CAACACCACAGCCCAGGCAGATAACTCTTCCAAGAGGATTTTACCTAAGTTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR TCA 90 bp | GAGGCTTGTGACACAAAGACAGCTATACAGCTTGGAGACAAAAGAAAGAAACTTAATATTTCCAGAAGGTaGAGTTGGAGGCTCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EACDTKTAIQLGDKRKKLNISRR*SWRLPG Trigger: TCCTGGGAGCCTCCAACTTCACCTTCTGGAAATATT...AAGTTTCTTTCTTTTGTCTCCAAGCTGTATAGCTGTCTTTGTGTCACAAGCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR TCA 90 bp | CAGCTGCTCTCACAGACATGCAGCTCTAGCACCATAGGAATTGCTAACAGCAAAGATAGCCAAGTAGGCTaGATATTCCAAAATATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QLLSQTCSSSTIGIANSKDSQVG*IFQNIS Trigger: GGAAATATTTTGGAATATTCAGCCTACTTGGCTATC...TTTGCTGTTAGCAATTCCTATGGTGCTAGAGCTGCATGTCTGTGAGAGCAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR CCA 90 bp | CAGCTGCTCTCACAGACATGCAGCTCTAGCACCATAGGAATTGCTAACAGCAAACTCATGAATACAAGTTaGCTTGGATTATCTTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: QLLSQTCSSSTIGIANSKLMNTS*LGLSCI Trigger: GATGCAAGATAATCCAAGCCAACTTGTATTCATGAG...TTTGCTGTTAGCAATTCCTATGGTGCTAGAGCTGCATGTCTGTGAGAGCAGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR GCA 90 bp | GAGGCTTGTGACACAAAGACAGCTATACAGCTTGGAGACAAAAGAAAGAAACTTTGGCTTGGATTATCTTaGATCTGTGCTGTGCGGATA | + |
|
Preference number: 4 (lower is better) Translates to: EACDTKTAIQLGDKRKKLWLGLS*ICAVRI Trigger: TATCCGCACAGCACAGATGCAAGATAATCCAAGCCA...AAGTTTCTTTCTTTTGTCTCCAAGCTGTATAGCTGTCTTTGTGTCACAAGCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR CCA 90 bp | AACCTAGGTCCTATTAGACACGTGACAGTGTTCAGGGATATAGCCAGCTCCCAACTTATATACTGTTCCTaGAACAAGATCCTGTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NLGPIRHVTVFRDIASSQLIYCS*NKILFL Trigger: AAGAAACAGGATCTTGTTCCAGGAACAGTATATAAG...TTGGGAGCTGGCTATATCCCTGAACACTGTCACGTGTCTAATAGGACCTAGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
||
| CDS-3UTR TCA 90 bp | TGCCTCCCATGCAAACAGATTCTCTTAGTTCTTAAATACAGACTGAGTTTATATTCTTTGCGGATATTCTaGACACAATGGCGGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CLPCKQILLVLKYRLSLYSLRIF*TQWRVW Trigger: CCAGACCCGCCATTGTGTTCAGAATATCCGCAAAGA...ATATAAACTCAGTCTGTATTTAAGAACTAAGAGAATCTGTTTGCATGGGAGGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR TCA 90 bp | AAAAATGTACATCTTGTTTCCTATAACACTGGCTGTATGAAGGCTTCGTGGAAGTTCTGGTTTGGACCATaGCATAGTTTCTGGGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: KNVHLVSYNTGCMKASWKFWFGP*HSFWGH Trigger: ATGTCCCCAGAAACTATGTCATGGTCCAAACCAGAA...CTTCCACGAAGCCTTCATACAGCCAGTGTTATAGGAAACAAGATGTACATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162422.2 |
||
| CDS-3UTR CCA 90 bp | GAGGCTTGTGACACAAAGACAGCTATACAGCTTGGAGACAAAAGAAAGAAACTTACACAATGGCGGGTCTaGATGTGTAATCAATATGTG | + |
|
Preference number: 4 (lower is better) Translates to: EACDTKTAIQLGDKRKKLTQWRV*MCNQYV Trigger: CACATATTGATTACACATCCAGACCCGCCATTGTGT...AAGTTTCTTTCTTTTGTCTCCAAGCTGTATAGCTGTCTTTGTGTCACAAGCCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR TCA 90 bp | AGATGCAAACTGCTAATTAATACAAAGAATAGGACTGGAAGCCCAAAGTTTTCTAATATTTCCAGAAGGTaGAGTTGGAGGCTCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RCKLLINTKNRTGSPKFSNISRR*SWRLPG Trigger: TCCTGGGAGCCTCCAACTTCACCTTCTGGAAATATT...AGAAAACTTTGGGCTTCCAGTCCTATTCTTTGTATTAATTAGCAGTTTGCATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
||
| CDS-3UTR GCA 90 bp | TCAGACACAAATCAAGACTGTCCACTATCCTTTTTATATTTTGCTGGGATTCTCACGGCTGATCTTAGTTaGAGGCAGAGCACATATTTC | + |
|
Preference number: 4 (lower is better) Translates to: SDTNQDCPLSFLYFAGILTADLS*RQSTYF Trigger: GAAATATGTGCTCTGCCTGCAACTAAGATCAGCCGT...GAGAATCCCAGCAAAATATAAAAAGGATAGTGGACAGTCTTGATTTGTGTCTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
||
| CDS-3UTR GCA 90 bp | AGATGCAAACTGCTAATTAATACAAAGAATAGGACTGGAAGCCCAAAGTTTTCTATCACACCACTGCTCTaGTTTCAAAATGGCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: RCKLLINTKNRTGSPKFSITPLL*FQNGHW Trigger: CCAGTGGCCATTTTGAAAGCAGAGCAGTGGTGTGAT...AGAAAACTTTGGGCTTCCAGTCCTATTCTTTGTATTAATTAGCAGTTTGCATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
||
| CDS-3UTR CCA 90 bp | TGCCTCCCATGCAAACAGATTCTCTTAGTTCTTAAATACAGACTGAGTTTATATTGTATGAAGGCTTCGTaGAAGTGGCACTGTCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CLPCKQILLVLKYRLSLYCMKAS*KWHCPF Trigger: AAAGGGACAGTGCCACTTCCACGAAGCCTTCATACA...ATATAAACTCAGTCTGTATTTAAGAACTAAGAGAATCTGTTTGCATGGGAGGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| 3UTR CAA 72 bp | GACAAAAGAAAGAAACTTAACTTAGGTAAAATCCTCTaGGAAGAGTTATCTGCCTGGGCTGTGGTGTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DKRKKLNLGKIL*EELSAWAVVLL Trigger: AAGCAACACCACAGCCCAGGCAGATAACTCTTCCAAGAGGATTTTACCTAAGTTAAGTTTCTTTCTTTTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR GCA 90 bp | CAGTCCCATAACAGAAACATGATTTATGCTAAGGAAGTAATGCCAATGGAAAAAACGGCTGATCTTAGTTaGAGGCAGAGCACATATTTC | + |
|
Preference number: 4 (lower is better) Translates to: QSHNRNMIYAKEVMPMEKTADLS*RQSTYF Trigger: GAAATATGTGCTCTGCCTGCAACTAAGATCAGCCGT...TTTTTCCATTGGCATTACTTCCTTAGCATAAATCATGTTTCTGTTATGGGACTG 39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR CCA 90 bp | CAGTCCCATAACAGAAACATGATTTATGCTAAGGAAGTAATGCCAATGGAAAAAAGTATGGGATTCTCTTaGAGAAGGCACAACGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QSHNRNMIYAKEVMPMEKSMGFS*RRHNAF Trigger: AAAGGCGTTGTGCCTTCTCCAAGAGAATCCCATACT...TTTTTCCATTGGCATTACTTCCTTAGCATAAATCATGTTTCTGTTATGGGACTG 39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR TCA 90 bp | TCTGCATCCCATGTAACTTTGGTTAAGACATGTTTAGCTTCTATCAGACACATCGATAGCCAAGTAGGCTaGATATTCCAAAATATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SASHVTLVKTCLASIRHIDSQVG*IFQNIS Trigger: GGAAATATTTTGGAATATTCAGCCTACTTGGCTATC...GATGTGTCTGATAGAAGCTAAACATGTCTTAACCAAAGTTACATGGGATGCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
||
| CDS-3UTR GCA 90 bp | GACAAAAGAAAGAAACTTAACTTAGGTAAAATCCTCTTGGAAGAGTTATCTGCCGTTTCTAAATCAAGCTaGCATAGGTCATCCAGACGA | + |
|
Preference number: 4 (lower is better) Translates to: DKRKKLNLGKILLEELSAVSKSS*HRSSRR Trigger: TCGTCTGGATGACCTATGGCAGCTTGATTTAGAAAC...GGCAGATAACTCTTCCAAGAGGATTTTACCTAAGTTAAGTTTCTTTCTTTTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR GCA 90 bp | TGCCTCCCATGCAAACAGATTCTCTTAGTTCTTAAATACAGACTGAGTTTATATTGTGTAATCAATATGTaGATTTGCAAGCTGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CLPCKQILLVLKYRLSLYCVINM*ICKLPS Trigger: GCTGGGCAGCTTGCAAATGCACATATTGATTACACA...ATATAAACTCAGTCTGTATTTAAGAACTAAGAGAATCTGTTTGCATGGGAGGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR CCA 90 bp | AGATGCAAACTGCTAATTAATACAAAGAATAGGACTGGAAGCCCAAAGTTTTCTACACAATGGCGGGTCTaGATGTGTAATCAATATGTG | + |
|
Preference number: 4 (lower is better) Translates to: RCKLLINTKNRTGSPKFSTQWRV*MCNQYV Trigger: CACATATTGATTACACATCCAGACCCGCCATTGTGT...AGAAAACTTTGGGCTTCCAGTCCTATTCTTTGTATTAATTAGCAGTTTGCATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
||
| CDS-3UTR GCA 90 bp | CTAAGTGCTTTAGCTAAAGATACATTCAGGTATCTTGGTCAGACACAAATCAAGGCCCTTTTCATTCTTTaGGGATATTCTGAACACAAT | + |
|
Preference number: 4 (lower is better) Translates to: LSALAKDTFRYLGQTQIKALFIL*GYSEHN Trigger: ATTGTGTTCAGAATATCCGCAAAGAATGAAAAGGGC...CTTGATTTGTGTCTGACCAAGATACCTGAATGTATCTTTAGCTAAAGCACTTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
||
| CDS-3UTR GCA 90 bp | GACAAAAGAAAGAAACTTAACTTAGGTAAAATCCTCTTGGAAGAGTTATCTGCCGCCCTTTTCATTCTTTaGGGATATTCTGAACACAAT | + |
|
Preference number: 4 (lower is better) Translates to: DKRKKLNLGKILLEELSAALFIL*GYSEHN Trigger: ATTGTGTTCAGAATATCCGCAAAGAATGAAAAGGGC...GGCAGATAACTCTTCCAAGAGGATTTTACCTAAGTTAAGTTTCTTTCTTTTGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR CCA 90 bp | AGATGCAAACTGCTAATTAATACAAAGAATAGGACTGGAAGCCCAAAGTTTTCTCTCATGAATACAAGTTaGCTTGGATTATCTTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: RCKLLINTKNRTGSPKFSLMNTS*LGLSCI Trigger: GATGCAAGATAATCCAAGCCAACTTGTATTCATGAG...AGAAAACTTTGGGCTTCCAGTCCTATTCTTTGTATTAATTAGCAGTTTGCATCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
||
| CDS GCA 90 bp | CCGAAGATGATCATCAGCTCCCGGATGGCCACGGCTCGGTGTCCGTaGCGGGCGCGAGGCACCGGTCCGGTAAAGGAGGAAACCCGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PKMIISSRMATARCP*RARGTGPVKEETRL Trigger: GAGGCGGGTTTCCTCCTTTACCGGACCGGTGCCTCGCGCCCGGCACGGACACCGAGCCGTGGCCATCCGGGAGCTGATGATCATCTTCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR CAA 90 bp | ACTAGCCTAGGTGCCCAGGCCCCAAGGTCAATCTCCAGTTCTCCAGCGTGCACAGAAGGCACAACGCCTTaGGTGGCTGGGATGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TSLGAQAPRSISSSPACTEGTTP*VAGMLQ Trigger: CTGGAGCATCCCAGCCACCAAAGGCGTTGTGCCTTC...TGTGCACGCTGGAGAACTGGAGATTGACCTTGGGGCCTGGGCACCTAGGCTAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR CAA 90 bp | CTTGTTTCCTATAACACTGGCTGTATGAAGGCTTCGTGGAAGTGGCACTGTCCCTCCGCGATGCCCTCGTaGCCCCCGCCGAAGATGATC | + |
|
Preference number: 5 (lower is better) Translates to: LVSYNTGCMKASWKWHCPSAMPS*PPPKMI Trigger: GATCATCTTCGGCGGGGGCAACGAGGGCATCGCGGA...GGGACAGTGCCACTTCCACGAAGCCTTCATACAGCCAGTGTTATAGGAAACAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162422.2 |
||
| CDS-3UTR CAA 90 bp | ACTAGCCTAGGTGCCCAGGCCCCAAGGTCAATCTCCAGTTCTCCAGCGTGCACAATAGTCGAGTGCCAATaGCAACAGCGCAGTGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: TSLGAQAPRSISSSPACTIVECQ*QQRSVL Trigger: CAGGACACTGCGCTGTTGCAATTGGCACTCGACTAT...TGTGCACGCTGGAGAACTGGAGATTGACCTTGGGGCCTGGGCACCTAGGCTAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS CCA 90 bp | TCTTGCGCAGCATGTCCGTCACCCAGCTGCTGTTATTGGAAGTGTTaGGTGCCAATGGTGAATGCAGAGCGGCACTCGAGTCAACTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SCAACPSPSCCYWKC*VPMVNAERHSSQLL Trigger: GAGCAGTTGACTCGAGTGCCGCTCTGCATTCACCATTGGCACCCAACACTTCCAATAACAGCAGCTGGGTGACGGACATGCTGCGCAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR CAA 90 bp | ACTAGCCTAGGTGCCCAGGCCCCAAGGTCAATCTCCAGTTCTCCAGCGTGCACAGGCACTTCATCCCACTaGACATGGAAAGAGTTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: TSLGAQAPRSISSSPACTGTSSH*TWKELV Trigger: TACCAACTCTTTCCATGTCAAGTGGGATGAAGTGCC...TGTGCACGCTGGAGAACTGGAGATTGACCTTGGGGCCTGGGCACCTAGGCTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS GCA 90 bp | TATGGGATTCTCTTGGAGAAGGCACAACGCCTTTGGTGGCTGGGATaGTCCAGCCCACAACACCAGAACCATGCTGTAGCTCCAACTCAT | + |
|
Preference number: 5 (lower is better) Translates to: YGILLEKAQRLWWLG*SSPQHQNHAVAPTH Trigger: ATGAGTTGGAGCTACAGCATGGTTCTGGTGTTGTGGGCTGGAGCATCCCAGCCACCAAAGGCGTTGTGCCTTCTCCAAGAGAATCCCATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR CAA 90 bp | CTTAACTTAGGTAAAATCCTCTTGGAAGAGTTATCTGCCTGGGCTGTGGTGTTGTCCGCGATGCCCTCGTaGCCCCCGCCGAAGATGATC | + |
|
Preference number: 5 (lower is better) Translates to: LNLGKILLEELSAWAVVLSAMPS*PPPKMI Trigger: GATCATCTTCGGCGGGGGCAACGAGGGCATCGCGGA...CAACACCACAGCCCAGGCAGATAACTCTTCCAAGAGGATTTTACCTAAGTTAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR CAA 90 bp | CCCAGGCCCCAAGGTCAATCTCCAGTTCTCCAGCGTGCACACACACGCACACACCCGTGTGTTCAGTTTTaGTACTGTTTACTGTATCAC | + |
|
Preference number: 5 (lower is better) Translates to: PRPQGQSPVLQRAHTRTHPCVQF*YCLLYH Trigger: GTGATACAGTAAACAGTACAAAAACTGAACACACGG...GTGTGTGCGTGTGTGTGCACGCTGGAGAACTGGAGATTGACCTTGGGGCCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR CAA 90 bp | CTATGCATGTTGGCAGAACAGCTGCTCTCACAGACATGCAGCTCTAGCACCATAGGTGCTATTACTGCCTaGTCTGTGAGGGTCCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: LCMLAEQLLSQTCSSSTIGAITA*SVRVHP Trigger: AGGATGGACCCTCACAGACAAGGCAGTAATAGCACC...TATGGTGCTAGAGCTGCATGTCTGTGAGAGCAGCTGTTCTGCCAACATGCATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR CAA 90 bp | CCCAGGCCCCAAGGTCAATCTCCAGTTCTCCAGCGTGCACACACACGCACACACCTGCATTTCCTACCTTaGACATACTTTGTTTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PRPQGQSPVLQRAHTRTHLHFLP*TYFVFL Trigger: AAGGAAAACAAAGTATGTCAAAGGTAGGAAATGCAG...GTGTGTGCGTGTGTGTGCACGCTGGAGAACTGGAGATTGACCTTGGGGCCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR CAA 90 bp | CACACGAAGGTTGGAGGGCACAGCTACTCAGTCGTCCTACACTGGCATGAGATCAATCAATATGTGCATTaGCAAGCTGCCCAGCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: HTKVGGHSYSVVLHWHEINQYVH*QAAQQS Trigger: TGACTGCTGGGCAGCTTGCAAATGCACATATTGATT...GATCTCATGCCAGTGTAGGACGACTGAGTAGCTGTGCCCTCCAACCTTCGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
||
| CDS-3UTR CAA 90 bp | CTATGCATGTTGGCAGAACAGCTGCTCTCACAGACATGCAGCTCTAGCACCATACAGTATGGGATTCTCTaGGAGAAGGCACAACGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LCMLAEQLLSQTCSSSTIQYGIL*EKAQRL Trigger: AAGGCGTTGTGCCTTCTCCAAGAGAATCCCATACTG...TATGGTGCTAGAGCTGCATGTCTGTGAGAGCAGCTGTTCTGCCAACATGCATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR CAA 90 bp | ACTAGCCTAGGTGCCCAGGCCCCAAGGTCAATCTCCAGTTCTCCAGCGTGCACATTGACATGGAAAGAGTaGGTAGTAGCTTTGATTAAC | + |
|
Preference number: 5 (lower is better) Translates to: TSLGAQAPRSISSSPACTLTWKE*VVALIN Trigger: GTTAATCAAAGCTACTACCAACTCTTTCCATGTCAA...TGTGCACGCTGGAGAACTGGAGATTGACCTTGGGGCCTGGGCACCTAGGCTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR CAA 90 bp | CAGTCCCATAACAGAAACATGATTTATGCTAAGGAAGTAATGCCAATGGAAAAAGAAACCCGCCTCCAGTaGAGGAGGCTGGGAGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: QSHNRNMIYAKEVMPMEKETRLQ*RRLGAA Trigger: GGCGGCTCCCAGCCTCCTCAACTGGAGGCGGGTTTC...TTTTTCCATTGGCATTACTTCCTTAGCATAAATCATGTTTCTGTTATGGGACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR CAA 90 bp | ATATTCATCTACACTGGGCACATCACACGAAGGTTGGAGGGCACAGCTACTCAGCTGTTATTGGAAGTGTaGGGTGCCAATGGTGAATGC | + |
|
Preference number: 5 (lower is better) Translates to: IFIYTGHITRRLEGTATQLLLEV*GANGEC Trigger: GCATTCACCATTGGCACCCAACACTTCCAATAACAG...CTGAGTAGCTGTGCCCTCCAACCTTCGTGTGATGTGCCCAGTGTAGATGAATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
||
| CDS GCA 90 bp | AAATGGCGTTGCTGCAGCATGCACCTCTACACGGCTGATCTTAGTTaGAGGCAGAGCACATATTTCATCAACTTCATTCTTGCGCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: KWRCCSMHLYTADLS*RQSTYFINFILAQH Trigger: ATGCTGCGCAAGAATGAAGTTGATGAAATATGTGCTCTGCCTGCAACTAAGATCAGCCGTGTAGAGGTGCATGCTGCAGCAACGCCATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020478.14 ENSMUST00000160681.2 |
||
| CDS CCA 90 bp | TCCAAAATATTTCCAGAAGGTGAAGTTGGAGGCTCCCAGGAAAGGTaGATACCGTCAACATTCTTAGAGATGCGGACTGTAGATGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SKIFPEGEVGGSQER*IPSTFLEMRTVDGA Trigger: AGCCCCATCTACAGTCCGCATCTCTAAGAATGTTGACGGTATCCACCTTTCCTGGGAGCCTCCAACTTCACCTTCTGGAAATATTTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020478.14 ENSMUST00000160681.2 |
||
| CDS-3UTR CAA 90 bp | GTACTCAGCCAGGGCATTTACAACATGGGAAACACCCACCACAGTGGTGTACACTTTCTTACTGTTACCTaGAAGCCATCGGACTTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: VLSQGIYNMGNTHHSGVHFLTVT*KPSDLC Trigger: ACACAAGTCCGATGGCTTCAAGGTAACAGTAAGAAA...GTGTACACCACTGTGGTGGGTGTTTCCCATGTTGTAAATGCCCTGGCTGAGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
||
| CDS GCA 90 bp | ACTGGATTTGAAGGTGTCTCTTTAGAAAATGGCGTTGCTGCAGCATaGACCTCTACACGGCTGATCTTAGTTGCAGGCAGAGCACATATT | + |
|
Preference number: 5 (lower is better) Translates to: TGFEGVSLENGVAAA*TSTRLILVAGRAHI Trigger: AATATGTGCTCTGCCTGCAACTAAGATCAGCCGTGTAGAGGTGCATGCTGCAGCAACGCCATTTTCTAAAGAGACACCTTCAAATCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020478.14 ENSMUST00000160681.2 |
||
| CDS CCA 90 bp | TCCACAGCCATTGATCGCAGCAACCCTGAACTTATATACTGTTCCTaGAACAAGATCCTGTTTCTTAAGCAAACTGTAGTCAGGCACGTC | + |
|
Preference number: 5 (lower is better) Translates to: STAIDRSNPELIYCS*NKILFLKQTVVRHV Trigger: GACGTGCCTGACTACAGTTTGCTTAAGAAACAGGATCTTGTTCCAGGAACAGTATATAAGTTCAGGGTTGCTGCGATCAATGGCTGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020478.14 ENSMUST00000160681.2 |
||
| CDS TCA 90 bp | GTAATCAATATGTGCATTTGCAAGCTGCCCAGCAGTCACTGTACATaGGGTTTTAAGACCACAGTAGATCCTCATGAATACAAGTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VINMCICKLPSSHCT*GFKTTVDPHEYKLA Trigger: AGCCAACTTGTATTCATGAGGATCTACTGTGGTCTTAAAACCTCATGTACAGTGACTGCTGGGCAGCTTGCAAATGCACATATTGATTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020478.14 ENSMUST00000160681.2 |
||
| CDS-3UTR CAA 90 bp | GACAAAAGAAAGAAACTTAACTTAGGTAAAATCCTCTTGGAAGAGTTATCTGCCCGCAGTGTCCTGCTCTaGGTCTTGGCCTTGAATTTT | + |
|
Preference number: 5 (lower is better) Translates to: DKRKKLNLGKILLEELSARSVLL*VLALNF Trigger: AAAATTCAAGGCCAAGACCAAGAGCAGGACACTGCG...GGCAGATAACTCTTCCAAGAGGATTTTACCTAAGTTAAGTTTCTTTCTTTTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR CAA 90 bp | CAGTCCCATAACAGAAACATGATTTATGCTAAGGAAGTAATGCCAATGGAAAAACTGTTATTGGAAGTGTaGGGTGCCAATGGTGAATGC | + |
|
Preference number: 5 (lower is better) Translates to: QSHNRNMIYAKEVMPMEKLLLEV*GANGEC Trigger: GCATTCACCATTGGCACCCAACACTTCCAATAACAG...TTTTTCCATTGGCATTACTTCCTTAGCATAAATCATGTTTCTGTTATGGGACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR CAA 90 bp | GACAAAAGAAAGAAACTTAACTTAGGTAAAATCCTCTTGGAAGAGTTATCTGCCAATCAATATGTGCATTaGCAAGCTGCCCAGCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: DKRKKLNLGKILLEELSANQYVH*QAAQQS Trigger: TGACTGCTGGGCAGCTTGCAAATGCACATATTGATT...GGCAGATAACTCTTCCAAGAGGATTTTACCTAAGTTAAGTTTCTTTCTTTTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR CAA 90 bp | GACAAAAGAAAGAAACTTAACTTAGGTAAAATCCTCTTGGAAGAGTTATCTGCCCCTTTAGTTTCTGGTTaGGACCATGACATAGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: DKRKKLNLGKILLEELSAPLVSG*DHDIVS Trigger: AGAAACTATGTCATGGTCCAAACCAGAAACTAAAGG...GGCAGATAACTCTTCCAAGAGGATTTTACCTAAGTTAAGTTTCTTTCTTTTGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR CAA 90 bp | TGCCTCCCATGCAAACAGATTCTCTTAGTTCTTAAATACAGACTGAGTTTATATGAGTTGGTAGTAGCTTaGATTAACTGCACTTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: CLPCKQILLVLKYRLSLYELVVA*INCTCD Trigger: ATCACAAGTGCAGTTAATCAAAGCTACTACCAACTC...ATATAAACTCAGTCTGTATTTAAGAACTAAGAGAATCTGTTTGCATGGGAGGCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR CAA 90 bp | GTCAGACACAAATCAAGACTGTCCACTATCCTTTTTATATTTTGCTGGGATTCTCTGCATTTCCTACCTTaGACATACTTTGTTTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VRHKSRLSTILFIFCWDSLHFLP*TYFVFL Trigger: AAGGAAAACAAAGTATGTCAAAGGTAGGAAATGCAG...AGAATCCCAGCAAAATATAAAAAGGATAGTGGACAGTCTTGATTTGTGTCTGAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
||
| CDS-3UTR CAA 90 bp | TGCCTCCCATGCAAACAGATTCTCTTAGTTCTTAAATACAGACTGAGTTTATATCCTCATGAATACAAGTaGGCTTGGATTATCTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: CLPCKQILLVLKYRLSLYPHEYK*AWIILH Trigger: ATGCAAGATAATCCAAGCCAACTTGTATTCATGAGG...ATATAAACTCAGTCTGTATTTAAGAACTAAGAGAATCTGTTTGCATGGGAGGCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS-3UTR CAA 90 bp | AGATGCAAACTGCTAATTAATACAAAGAATAGGACTGGAAGCCCAAAGTTTTCTCCTCATGAATACAAGTaGGCTTGGATTATCTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: RCKLLINTKNRTGSPKFSPHEYK*AWIILH Trigger: ATGCAAGATAATCCAAGCCAACTTGTATTCATGAGG...AGAAAACTTTGGGCTTCCAGTCCTATTCTTTGTATTAATTAGCAGTTTGCATCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160681.2 |
||
| CDS-3UTR CAA 90 bp | TGCCTCCCATGCAAACAGATTCTCTTAGTTCTTAAATACAGACTGAGTTTATATCCAAAAATGTACATCTaGTTTCCTATAACACTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CLPCKQILLVLKYRLSLYPKMYI*FPITLA Trigger: AGCCAGTGTTATAGGAAACAAGATGTACATTTTTGG...ATATAAACTCAGTCTGTATTTAAGAACTAAGAGAATCTGTTTGCATGGGAGGCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS TCA 72 bp | GCTCGTCCGCGATGCCCTCGTTGCCCCCGCCGAAGATaGTCATCAGCTCCCGGATGGCCACGGCTCGGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: ARPRCPRCPRRR*SSAPGWPRLGV Trigger: GACACCGAGCCGTGGCCATCCGGGAGCTGATGATCATCTTCGGCGGGGGCAACGAGGGCATCGCGGACGAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020478.14 ENSMUST00000162422.2 |
||
| CDS GCA 72 bp | ATCATCAGCTCCCGGATGGCCACGGCTCGGTGTCCGTaGCGGGCGCGAGGCACCGGTCCGGTAAAGGAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: IISSRMATARCP*RARGTGPVKEE Trigger: TTCCTCCTTTACCGGACCGGTGCCTCGCGCCCGGCACGGACACCGAGCCGTGGCCATCCGGGAGCTGATGAT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS CCA 72 bp | GGATTCTCTTGGAGAAGGCACAACGCCTTTGGTGGCTaGGATGCTCCAGCCCACAACACCAGAACCATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GFSWRRHNAFGG*DAPAHNTRTML Trigger: CAGCATGGTTCTGGTGTTGTGGGCTGGAGCATCCCAGCCACCAAAGGCGTTGTGCCTTCTCCAAGAGAATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS CCA 72 bp | CAGTATGGGATTCTCTTGGAGAAGGCACAACGCCTTTaGTGGCTGGGATGCTCCAGCCCACAACACCAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: QYGILLEKAQRL*WLGCSSPQHQN Trigger: GTTCTGGTGTTGTGGGCTGGAGCATCCCAGCCACCAAAGGCGTTGTGCCTTCTCCAAGAGAATCCCATACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS CCA 72 bp | GCATGTCCGTCACCCAGCTGCTGTTATTGGAAGTGTTaGGTGCCAATGGTGAATGCAGAGCGGCACTCGAGT | + |
|
Preference number: 6 (lower is better) Translates to: ACPSPSCCYWKC*VPMVNAERHSS Trigger: ACTCGAGTGCCGCTCTGCATTCACCATTGGCACCCAACACTTCCAATAACAGCAGCTGGGTGACGGACATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS TCA 72 bp | CCAGCTGCTGTTATTGGAAGTGTTGGGTGCCAATGGTaGATGCAGAGCGGCACTCGAGTCAACTGCTCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: PAAVIGSVGCQW*MQSGTRVNCSR Trigger: TCGAGAGCAGTTGACTCGAGTGCCGCTCTGCATTCACCATTGGCACCCAACACTTCCAATAACAGCAGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS CCA 72 bp | TATGGGATTCTCTTGGAGAAGGCACAACGCCTTTGGTaGCTGGGATGCTCCAGCCCACAACACCAGAACCAT | + |
|
Preference number: 6 (lower is better) Translates to: YGILLEKAQRLW*LGCSSPQHQNH Trigger: ATGGTTCTGGTGTTGTGGGCTGGAGCATCCCAGCCACCAAAGGCGTTGTGCCTTCTCCAAGAGAATCCCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS GCA 72 bp | CTGCTGTTATTGGAAGTGTTGGGTGCCAATGGTGAATaGAGAGCGGCACTCGAGTCAACTGCTCTCGAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: LLLLEVLGANGE*RAALESTALES Trigger: TGACTCGAGAGCAGTTGACTCGAGTGCCGCTCTGCATTCACCATTGGCACCCAACACTTCCAATAACAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS GCA 72 bp | CAACTTCATTCTTGCGCAGCATGTCCGTCACCCAGCTaGTGTTATTGGAAGTGTTGGGTGCCAATGGTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: QLHSCAACPSPS*CYWKCWVPMVN Trigger: ATTCACCATTGGCACCCAACACTTCCAATAACAGCAGCTGGGTGACGGACATGCTGCGCAAGAATGAAGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020478.14 ENSMUST00000160681.2 |
||
| CDS GCA 72 bp | GAAGGTGTCTCTTTAGAAAATGGCGTTGCTGCAGCATaGACCTCTACACGGCTGATCTTAGTTGCAGGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: EGVSLENGVAAA*TSTRLILVAGR Trigger: TCTGCCTGCAACTAAGATCAGCCGTGTAGAGGTGCATGCTGCAGCAACGCCATTTTCTAAAGAGACACCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020478.14 ENSMUST00000160681.2 |
||
| CDS GCA 72 bp | TTGCAGGCAGAGCACATATTTCATCAACTTCATTCTTaGGCAGCATGTCCGTCACCCAGCTGCTGTTATTGG | + |
|
Preference number: 6 (lower is better) Translates to: LQAEHIFHQLHS*AACPSPSCCYW Trigger: CCAATAACAGCAGCTGGGTGACGGACATGCTGCGCAAGAATGAAGTTGATGAAATATGTGCTCTGCCTGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020478.14 ENSMUST00000160681.2 |
||
| CDS CCA 72 bp | TTTCCAGAAGGTGAAGTTGGAGGCTCCCAGGAAAGGTaGATACCGTCAACATTCTTAGAGATGCGGACTGTA | + |
|
Preference number: 6 (lower is better) Translates to: FPEGEVGGSQER*IPSTFLEMRTV Trigger: TACAGTCCGCATCTCTAAGAATGTTGACGGTATCCACCTTTCCTGGGAGCCTCCAACTTCACCTTCTGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020478.14 ENSMUST00000160681.2 |
||
| CDS CAA 72 bp | GTTGCAGGCAGAGCACATATTTCATCAACTTCATTCTaGCGCAGCATGTCCGTCACCCAGCTGCTGTTATTG | + |
|
Preference number: 6 (lower is better) Translates to: VAGRAHISSTSF*RSMSVTQLLLL Trigger: CAATAACAGCAGCTGGGTGACGGACATGCTGCGCAAGAATGAAGTTGATGAAATATGTGCTCTGCCTGCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020478.14 ENSMUST00000160681.2 |
||
| CDS CAA 90 bp | CTGATCTTAGTTGCAGGCAGAGCACATATTTCATCAACTTCATTCTaGCGCAGCATGTCCGTCACCCAGCTGCTGTTATTGGAAGTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LILVAGRAHISSTSF*RSMSVTQLLLLEVL Trigger: CAACACTTCCAATAACAGCAGCTGGGTGACGGACATGCTGCGCAAGAATGAAGTTGATGAAATATGTGCTCTGCCTGCAACTAAGATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020478.14 ENSMUST00000160681.2 |
||
| CDS CAA 72 bp | CAATGGCGGGTCTGGATGTGTAATCAATATGTGCATTaGCAAGCTGCCCAGCAGTCACTGTACATGAGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: QWRVWMCNQYVH*QAAQQSLYMRF Trigger: AAACCTCATGTACAGTGACTGCTGGGCAGCTTGCAAATGCACATATTGATTACACATCCAGACCCGCCATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020478.14 ENSMUST00000160681.2 |
||
| CDS GCA 72 bp | TGCTGCAGCATGCACCTCTACACGGCTGATCTTAGTTaGAGGCAGAGCACATATTTCATCAACTTCATTCTT | + |
|
Preference number: 6 (lower is better) Translates to: CCSMHLYTADLS*RQSTYFINFIL Trigger: AAGAATGAAGTTGATGAAATATGTGCTCTGCCTGCAACTAAGATCAGCCGTGTAGAGGTGCATGCTGCAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020478.14 ENSMUST00000160681.2 |
||
| CDS CAA 72 bp | TCACTGACTTTACTGAGAGGGCCTATTCCACAGCCATaGATCGCAGCAACCCTGAACTTATATACTGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SLTLLRGPIPQP*IAATLNLYTVP Trigger: AGGAACAGTATATAAGTTCAGGGTTGCTGCGATCAATGGCTGTGGAATAGGCCCTCTCAGTAAAGTCAGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020478.14 ENSMUST00000160681.2 |
||
| CDS TCA 72 bp | ATGTGCATTTGCAAGCTGCCCAGCAGTCACTGTACATaGGGTTTTAAGACCACAGTAGATCCTCATGAATAC | + |
|
Preference number: 6 (lower is better) Translates to: MCICKLPSSHCT*GFKTTVDPHEY Trigger: GTATTCATGAGGATCTACTGTGGTCTTAAAACCTCATGTACAGTGACTGCTGGGCAGCTTGCAAATGCACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020478.14 ENSMUST00000160681.2 |
||
| CDS CAA 72 bp | CTTCGTGGAAGTGGCACTGTCCCTTTAGTTTCTGGTTaGGACCATGACATAGTTTCTAAATCAAGCTGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: LRGSGTVPLVSG*DHDIVSKSSCH Trigger: ATGGCAGCTTGATTTAGAAACTATGTCATGGTCCAAACCAGAAACTAAAGGGACAGTGCCACTTCCACGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020478.14 |
||
| CDS CAA 72 bp | GGTTTTAAGACCACAGTAGATCCTCATGAATACAAGTaGGCTTGGATTATCTTGCATCTGTGCTGTGCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: GFKTTVDPHEYK*AWIILHLCCAD Trigger: ATCCGCACAGCACAGATGCAAGATAATCCAAGCCAACTTGTATTCATGAGGATCTACTGTGGTCTTAAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020478.14 ENSMUST00000160681.2 |
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| CDS CAA 90 bp | GTTTTAAATTCACTGACTTTACTGAGAGGGCCTATTCCACAGCCATaGATCGCAGCAACCCTGAACTTATATACTGTTCCTGGAACAAGA | + |
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Preference number: 6 (lower is better) Translates to: VLNSLTLLRGPIPQP*IAATLNLYTVPGTR Trigger: TCTTGTTCCAGGAACAGTATATAAGTTCAGGGTTGCTGCGATCAATGGCTGTGGAATAGGCCCTCTCAGTAAAGTCAGTGAATTTAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020478.14 ENSMUST00000160681.2 |
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| CDS CAA 72 bp | CATAACCAACGACTTGCTTGTAACTCATATAACTCATaGCTGTATCTTCCATATTCAACCATTCCCCCAAAC | + |
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Preference number: 6 (lower is better) Translates to: HNQRLACNSYNS*LYLPYSTIPPN Trigger: GTTTGGGGGAATGGTTGAATATGGAAGATACAGCAATGAGTTATATGAGTTACAAGCAAGTCGTTGGTTATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020478.14 ENSMUST00000162422.2 |
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