Pregenerated sensors for HC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026874Ensembl transcript IDs: ENSMUST00000028233.7, ENSMUST00000156412.3
Found 244 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTACAGTTTCAGTGGGTCTCTTCTTCCGGCCCCAACCAACACCCCTaGCTGCTAACTTTACAGACTTGTTTCAGTCTATTGGCACTGACA | + |
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Preference number: 1 (lower is better) Translates to: LQFQWVSSSGPNQHP*LLTLQTCFSLLALT Trigger: TGTCAGTGCCAATAGACTGAAACAAGTCTGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACCCACTGAAACTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR GCA 90 bp | GGCTACAGTTTCAGTGGGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCCTGAGCTTCCTGAAGTaGAGATCCCCTCCACAGCAG | + |
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Preference number: 4 (lower is better) Translates to: GYSFSGSLLPAPTNTPDCLSFLK*RSPPQQ Trigger: CTGCTGTGGAGGGGATCTGCACTTCAGGAAGCTCAG...GCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACCCACTGAAACTGTAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR TCA 90 bp | TCAGTGGGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCTAACTTTACAGAGGGCCTGGAGGTGTaGAGGCTAGCAGCTGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: SVGLFFRPQPTPLTANFTEGLEV*RLAAEL Trigger: AAGCTCAGCTGCTAGCCTTCACACCTCCAGGCCCTC...TGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACCCACTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR TCA 90 bp | GGCTACAGTTTCAGTGGGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCCGTTTCTGTAGGACATaGCGCTCACCACCCCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: GYSFSGSLLPAPTNTPDCRFCRT*RSPPLV Trigger: AACAAGGGGTGGTGAGCGTCATGTCCTACAGAAACG...GCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACCCACTGAAACTGTAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR GCA 90 bp | GGCTACAGTTTCAGTGGGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCACCCCTCCTACCGCCTaGTCGAGTGAATCTTTAACC | + |
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Preference number: 4 (lower is better) Translates to: GYSFSGSLLPAPTNTPDCTPPTA*SSESLT Trigger: GGTTAAAGATTCACTCGAGCAGGCGGTAGGAGGGGT...GCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACCCACTGAAACTGTAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR GCA 90 bp | GGCTACAGTTTCAGTGGGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCCAGCTTCCACACATGTaGAAGCTGCTCCTTCACAGA | + |
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Preference number: 4 (lower is better) Translates to: GYSFSGSLLPAPTNTPDCQLPHM*KLLLHR Trigger: TCTGTGAAGGAGCAGCTTGCACATGTGTGGAAGCTG...GCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACCCACTGAAACTGTAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR CCA 90 bp | TCAGTGGGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCTAACTTTACATGCCATCAGAGTTACTaGGACCCCTCCTACCGCCTG | + |
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Preference number: 4 (lower is better) Translates to: SVGLFFRPQPTPLTANFTCHQSY*DPSYRL Trigger: CAGGCGGTAGGAGGGGTCCCAGTAACTCTGATGGCA...TGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACCCACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR CCA 90 bp | GCTACAGTTTCAGTGGGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCTAGATGGACCTGGAGCTaGTTGCCACACTTCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ATVSVGLFFRPQPTPLTARWTWS*LPHFSS Trigger: TGAGGAGAAGTGTGGCAACCAGCTCCAGGTCCATCT...AGCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACCCACTGAAACTGTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR CCA 90 bp | GGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCTAACTTTACAGACTTGCCTCTGCACTGCCCTTaGGGAGGTGGGTTAGGATGT | + |
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Preference number: 4 (lower is better) Translates to: GLFFRPQPTPLTANFTDLPLHCP*GGGLGC Trigger: ACATCCTAACCCACCTCCCCAAGGGCAGTGCAGAGG...CAAGTCTGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR CCA 90 bp | AGGATATGTTTTGATAAGGGGCTACAGTTTCAGTGGGTCTCTTCTTCCGGCCCCCTGCTGTGCCGCTGCTaGGCACAGAGCTGTCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: RICFDKGLQFQWVSSSGPLLCRC*AQSCLD Trigger: GTCCAGACAGCTCTGTGCCCAGCAGCGGCACAGCAG...GGGGCCGGAAGAAGAGACCCACTGAAACTGTAGCCCCTTATCAAAACATATCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR GCA 90 bp | GGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCTAACTTTACAGACTTGTATGCTCATGAGCTCTaGCTCTGCACTGCCCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: GLFFRPQPTPLTANFTDLYAHEL*LCTALG Trigger: CCCAAGGGCAGTGCAGAGGCAGAGCTCATGAGCATA...CAAGTCTGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR TCA 90 bp | GGCTACAGTTTCAGTGGGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCACTCCATCAGTGTCATaGGTGATGCTCCTCTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GYSFSGSLLPAPTNTPDCTPSVS*VMLLFV Trigger: AACAAAGAGGAGCATCACTCATGACACTGATGGAGT...GCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACCCACTGAAACTGTAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR TCA 90 bp | GCTACAGTTTCAGTGGGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCTGGTGGGTTAGGATGTTaGTGCCTTCCTTACTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: ATVSVGLFFRPQPTPLTAGGLGC*CLPYSE Trigger: TTCTGAGTAAGGAAGGCATCAACATCCTAACCCACC...AGCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACCCACTGAAACTGTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR GCA 90 bp | GGCTACAGTTTCAGTGGGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCCTTGTAGCTGGCACATaGTATTATGCGCTTGAATCC | + |
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Preference number: 4 (lower is better) Translates to: GYSFSGSLLPAPTNTPDCLVAGT*YYALES Trigger: GGATTCAAGCGCATAATAGCATGTGCCAGCTACAAG...GCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACCCACTGAAACTGTAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR TCA 90 bp | GCTACAGTTTCAGTGGGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCTAAATGTAACTTTGGCTaGGAGACGAGTACGCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: ATVSVGLFFRPQPTPLTAKCNFG*ETSTQL Trigger: CAGTTGCGTACTCGTCTCTCAGCCAAAGTTACATTT...AGCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACCCACTGAAACTGTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR TCA 90 bp | TCAGTGGGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCTAACTTTACACAACAAGGTCATCATTaGGAGATACCTCCACTGGCC | + |
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Preference number: 4 (lower is better) Translates to: SVGLFFRPQPTPLTANFTQQGHH*EIPPLA Trigger: GGCCAGTGGAGGTATCTCTCAATGATGACCTTGTTG...TGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACCCACTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR GCA 90 bp | GCTACAGTTTCAGTGGGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCTATAATGGGAGTCATCTaGGTTTGCGTTGGTGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ATVSVGLFFRPQPTPLTAIMGVI*VCVGEE Trigger: TTCCTCACCAACGCAAACGCAGATGACTCCCATTAT...AGCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACCCACTGAAACTGTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR GCA 90 bp | GGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCTAACTTTACAGACTTGTCAGGCAGCGTGACCTaGAGCTGTTTTCTTTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GLFFRPQPTPLTANFTDLSGSVT*SCFLLG Trigger: TCCCAAAAGAAAACAGCTGCAGGTCACGCTGCCTGA...CAAGTCTGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR CCA 90 bp | GGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCTAACTTTACAGACTTGGAAGGTGCTCTTGGATaGCAGGGTGTTTTCAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: GLFFRPQPTPLTANFTDLEGALG*QGVFKQ Trigger: CTGCTTGAAAACACCCTGCCATCCAAGAGCACCTTC...CAAGTCTGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR TCA 90 bp | GGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCTAACTTTACAGACTTGCTGGGTCATCAGTTCTaGTCTCAAACTTTAGCACCG | + |
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Preference number: 4 (lower is better) Translates to: GLFFRPQPTPLTANFTDLLGHQF*SQTLAP Trigger: CGGTGCTAAAGTTTGAGATCAGAACTGATGACCCAG...CAAGTCTGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR TCA 90 bp | GGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCTAACTTTACAGACTTGCTGTTTGCTCCCCTGTaGCTATGTAATAGACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GLFFRPQPTPLTANFTDLLFAPL*LCNRPG Trigger: TCCTGGTCTATTACATAGTCACAGGGGAGCAAACAG...CAAGTCTGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR GCA 90 bp | AGGATATGTTTTGATAAGGGGCTACAGTTTCAGTGGGTCTCTTCTTCCGGCCCCGGAGTCATCTGCGTTTaGGTTGGTGAGGAAGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: RICFDKGLQFQWVSSSGPGVICV*VGEEGE Trigger: CTCACCTTCCTCACCAACGCAAACGCAGATGACTCC...GGGGCCGGAAGAAGAGACCCACTGAAACTGTAGCCCCTTATCAAAACATATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR GCA 90 bp | AAGCAAGGATATGTTTTGATAAGGGGCTACAGTTTCAGTGGGTCTCTTCTTCCGTACCTGCTGTGCCGCTaGTGGGCACAGAGCTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: KQGYVLIRGYSFSGSLLPYLLCR*WAQSCL Trigger: CAGACAGCTCTGTGCCCAGCAGCGGCACAGCAGGTA...CGGAAGAAGAGACCCACTGAAACTGTAGCCCCTTATCAAAACATATCCTTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR GCA 90 bp | AAGCAAGGATATGTTTTGATAAGGGGCTACAGTTTCAGTGGGTCTCTTCTTCCGCAACCATACCTGCTGTaGCGCTGCTGGGCACAGAGC | + |
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Preference number: 4 (lower is better) Translates to: KQGYVLIRGYSFSGSLLPQPYLL*RCWAQS Trigger: GCTCTGTGCCCAGCAGCGGCACAGCAGGTATGGTTG...CGGAAGAAGAGACCCACTGAAACTGTAGCCCCTTATCAAAACATATCCTTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR GCA 90 bp | GGCTACAGTTTCAGTGGGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCCAAATTCTCTACAAATaGTTGACAGGATGGACACGT | + |
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Preference number: 4 (lower is better) Translates to: GYSFSGSLLPAPTNTPDCQILYK*LTGWTR Trigger: ACGTGTCCATCCTGTCAAGCATTTGTAGAGAATTTG...GCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACCCACTGAAACTGTAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR CCA 90 bp | CGGCCCCAACCAACACCCCTGACTGCTAACTTTACAGACTTGTTTCAGTCTATTAGTCTCCCGTTTGGCTaGCTTCAAGTCGTCACCCAG | + |
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Preference number: 4 (lower is better) Translates to: RPQPTPLTANFTDLFQSISLPFG*LQVVTQ Trigger: CTGGGTGACGACTTGAAGCCAGCCAAACGGGAGACT...AATAGACTGAAACAAGTCTGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR CCA 90 bp | GCTACAGTTTCAGTGGGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCTATACACATATTCATCTaGAGACAGATGGACCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: ATVSVGLFFRPQPTPLTAIHIFI*RQMDLE Trigger: CTCCAGGTCCATCTGTCTCCAGATGAATATGTGTAT...AGCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACCCACTGAAACTGTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR CCA 90 bp | GCTACAGTTTCAGTGGGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCTTCAAGGGACACAGTTTaGCCTGGAGAATACACATAT | + |
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Preference number: 4 (lower is better) Translates to: ATVSVGLFFRPQPTPLTASRDTV*PGEYTY Trigger: ATATGTGTATTCTCCAGGCCAAACTGTGTCCCTTGA...AGCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACCCACTGAAACTGTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR CCA 90 bp | GGCTACAGTTTCAGTGGGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCTACAAAGTTTTCTCTTaGGCTTCAGCAGGCAAAGTA | + |
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Preference number: 4 (lower is better) Translates to: GYSFSGSLLPAPTNTPDCYKVFS*ASAGKV Trigger: TACTTTGCCTGCTGAAGCCCAAGAGAAAACTTTGTA...GCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACCCACTGAAACTGTAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR GCA 90 bp | CGGCCCCAACCAACACCCCTGACTGCTAACTTTACAGACTTGTTTCAGTCTATTATGTTGACTCCTCCTTaGTGGGCTTGTAGCTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: RPQPTPLTANFTDLFQSIMLTPP*WACSWH Trigger: GTGCCAGCTACAAGCCCAGCAAGGAGGAGTCAACAT...AATAGACTGAAACAAGTCTGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR GCA 90 bp | GGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCTAACTTTACAGACTTGGGGATCGAATTCAGTTaGAGAATGACATGGCCATCT | + |
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Preference number: 4 (lower is better) Translates to: GLFFRPQPTPLTANFTDLGIEFS*RMTWPS Trigger: AGATGGCCATGTCATTCTGCAACTGAATTCGATCCC...CAAGTCTGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR TCA 90 bp | GCTACAGTTTCAGTGGGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCTATGCAGGTTTCTCTTTaGCCTGAGAATTTCTTTACA | + |
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Preference number: 4 (lower is better) Translates to: ATVSVGLFFRPQPTPLTAMQVSL*PENFFT Trigger: TGTAAAGAAATTCTCAGGTCAAAGAGAAACCTGCAT...AGCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACCCACTGAAACTGTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR GCA 90 bp | CGGCCCCAACCAACACCCCTGACTGCTAACTTTACAGACTTGTTTCAGTCTATTAGACGAGTACGCAACTaGTTCGTACTCTTTGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: RPQPTPLTANFTDLFQSIRRVRN*FVLFAG Trigger: GCCAGCAAAGAGTACGAAGCAGTTGCGTACTCGTCT...AATAGACTGAAACAAGTCTGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR GCA 90 bp | GTGCTTTACTCTAAAGAAAGTGTATCTGATTCTAGGCTAGGTTTCCAAGCCAGACATGAGCTCTGCCTCTaGACTGCCCTTGGGGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: VLYSKESVSDSRLGFQARHELCL*TALGEV Trigger: CACCTCCCCAAGGGCAGTGCAGAGGCAGAGCTCATG...TCTGGCTTGGAAACCTAGCCTAGAATCAGATACACTTTCTTTAGAGTAAAGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR GCA 90 bp | GGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCTAACTTTACAGACTTGGGGGCATATGTCAACTaGCTTTCTAATTCCAATCAC | + |
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Preference number: 4 (lower is better) Translates to: GLFFRPQPTPLTANFTDLGAYVN*LSNSNH Trigger: GTGATTGGAATTAGAAAGGCAGTTGACATATGCCCC...CAAGTCTGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR CCA 90 bp | GCTACAGTTTCAGTGGGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCTACAGGTTTGTCTGTATaGATGAAGAGAATTCCATTG | + |
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Preference number: 4 (lower is better) Translates to: ATVSVGLFFRPQPTPLTATGLSV*MKRIPL Trigger: CAATGGAATTCTCTTCATCCATACAGACAAACCTGT...AGCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACCCACTGAAACTGTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR CCA 90 bp | CGGCCCCAACCAACACCCCTGACTGCTAACTTTACAGACTTGTTTCAGTCTATTTGGATCCTTCCCAGTTaGACAGGTTTATGGGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: RPQPTPLTANFTDLFQSIWILPS*TGLWGL Trigger: AAGCCCCCATAAACCTGTCCAACTGGGAAGGATCCA...AATAGACTGAAACAAGTCTGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR CCA 90 bp | GGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCTAACTTTACAGACTTGACAGTTCCTTTCAATTaGATCTGTTCTCCTCGCACA | + |
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Preference number: 4 (lower is better) Translates to: GLFFRPQPTPLTANFTDLTVPFN*ICSPRT Trigger: TGTGCGAGGAGAACAGATCCAATTGAAAGGAACTGT...CAAGTCTGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR CCA 90 bp | AAGCAAGGATATGTTTTGATAAGGGGCTACAGTTTCAGTGGGTCTCTTCTTCCGGAGCCCTCTATCCTCTaGAACACACATCTGGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: KQGYVLIRGYSFSGSLLPEPSIL*NTHLEG Trigger: GCCCTCCAGATGTGTGTTCCAGAGGATAGAGGGCTC...CGGAAGAAGAGACCCACTGAAACTGTAGCCCCTTATCAAAACATATCCTTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR CCA 90 bp | GGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCTAACTTTACAGACTTGTTTTTACATATACTGTaGCCAAGCCACTGCTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: GLFFRPQPTPLTANFTDLFLHIL*PSHCCS Trigger: GCTACAGCAGTGGCTTGGCCACAGTATATGTAAAAA...CAAGTCTGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR CCA 90 bp | GCTACAGTTTCAGTGGGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCTAGACTTTCTGAAGCCTaGTGTCAGAAATGCTATAAA | + |
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Preference number: 4 (lower is better) Translates to: ATVSVGLFFRPQPTPLTARLSEA*CQKCYK Trigger: TTTATAGCATTTCTGACACCAGGCTTCAGAAAGTCT...AGCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACCCACTGAAACTGTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR TCA 90 bp | TCAGTGGGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCTAACTTTACAAAGTCAGATGTCTCTTaGTTCACATCGACTGTTTGT | + |
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Preference number: 4 (lower is better) Translates to: SVGLFFRPQPTPLTANFTKSDVS*FTSTVC Trigger: ACAAACAGTCGATGTGAATCAAGAGACATCTGACTT...TGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACCCACTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR TCA 90 bp | AAGCAAGGATATGTTTTGATAAGGGGCTACAGTTTCAGTGGGTCTCTTCTTCCGGACCAGGAGTCGTGCTaGAGGAACCATGTTCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: KQGYVLIRGYSFSGSLLPDQESC*RNHVLC Trigger: ACACAGAACATGGTTCCTTCAGCACGACTCCTGGTC...CGGAAGAAGAGACCCACTGAAACTGTAGCCCCTTATCAAAACATATCCTTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR TCA 90 bp | AAGCAAGGATATGTTTTGATAAGGGGCTACAGTTTCAGTGGGTCTCTTCTTCCGGTGAGTCAGGCAGCGTaGCCTGCAGCTGTTTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: KQGYVLIRGYSFSGSLLPVSQAA*PAAVFF Trigger: AAAGAAAACAGCTGCAGGTCACGCTGCCTGACTCAC...CGGAAGAAGAGACCCACTGAAACTGTAGCCCCTTATCAAAACATATCCTTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR GCA 90 bp | CGGCCCCAACCAACACCCCTGACTGCTAACTTTACAGACTTGTTTCAGTCTATTCACATCGACTGTTTGTaGCATCAGAGTTACTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: RPQPTPLTANFTDLFQSIHIDCL*HQSYWD Trigger: GTCCCAGTAACTCTGATGGCACAAACAGTCGATGTG...AATAGACTGAAACAAGTCTGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR GCA 90 bp | ACTTTACAGACTTGTTTCAGTCTATTGGCACTGACATCTGATAGCCTTGGGGGAACTTCTGCCTGCAGTTaGGCACAGTCAGCTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: TLQTCFSLLALTSDSLGGTSACS*AQSAST Trigger: TGTGGAAGCTGACTGTGCGCAACTGCAGGCAGAAGT...TCCCCCAAGGCTATCAGATGTCAGTGCCAATAGACTGAAACAAGTCTGTAAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CCA 90 bp | AAGCAAGGATATGTTTTGATAAGGGGCTACAGTTTCAGTGGGTCTCTTCTTCCGAGGTCACCAAGTGACTaGACGAGCCCTCTATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KQGYVLIRGYSFSGSLLPRSPSD*TSPLSS Trigger: AGAGGATAGAGGGCTCGTCCAGTCACTTGGTGACCT...CGGAAGAAGAGACCCACTGAAACTGTAGCCCCTTATCAAAACATATCCTTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CCA 90 bp | CGGCCCCAACCAACACCCCTGACTGCTAACTTTACAGACTTGTTTCAGTCTATTGCAAAGCATAGGCTGTaGTTTCAACCATACCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RPQPTPLTANFTDLFQSIAKHRL*FQPYLL Trigger: CAGCAGGTATGGTTGAAACCACAGCCTATGCTTTGC...AATAGACTGAAACAAGTCTGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CCA 90 bp | ACTTTACAGACTTGTTTCAGTCTATTGGCACTGACATCTGATAGCCTTGGGGGATTGACTCCTCCTTGCTaGGCTTGTAGCTGGCACATG | + |
|
Preference number: 4 (lower is better) Translates to: TLQTCFSLLALTSDSLGGLTPPC*ACSWHM Trigger: CATGTGCCAGCTACAAGCCCAGCAAGGAGGAGTCAA...TCCCCCAAGGCTATCAGATGTCAGTGCCAATAGACTGAAACAAGTCTGTAAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR TCA 90 bp | CGGCCCCAACCAACACCCCTGACTGCTAACTTTACAGACTTGTTTCAGTCTATTTTTTGGGTGCTGAAATaGCGTAGGTTTGTTCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RPQPTPLTANFTDLFQSIFWVLK*RRFVPV Trigger: GACAGGAACAAACCTACGTCATTTCAGCACCCAAAA...AATAGACTGAAACAAGTCTGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCG 47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR TCA 90 bp | TCAGTGGGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCTAACTTTACACACCTGAAGATTCTGTaGCTGTTACTGCAATATAAA | + |
|
Preference number: 4 (lower is better) Translates to: SVGLFFRPQPTPLTANFTHLKIL*LLLQYK Trigger: TTTATATTGCAGTAACAGTCACAGAATCTTCAGGTG...TGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACCCACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR TCA 90 bp | AGGATATGTTTTGATAAGGGGCTACAGTTTCAGTGGGTCTCTTCTTCCGGCCCCTACTCTTTGCTGGCTTaGTTTTCTTCGGGAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RICFDKGLQFQWVSSSGPYSLLA*FSSGSS Trigger: AGAACTTCCCGAAGAAAATCAAGCCAGCAAAGAGTA...GGGGCCGGAAGAAGAGACCCACTGAAACTGTAGCCCCTTATCAAAACATATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR TCA 90 bp | TCAGTGGGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCTAACTTTACAGGTTTCTCTTTGACCTaGGAATTTCTTTACAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SVGLFFRPQPTPLTANFTGFSLT*EFLYKS Trigger: ACTCTTGTAAAGAAATTCTCAGGTCAAAGAGAAACC...TGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACCCACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR TCA 90 bp | ACTCATCAGCTTGTGCTTTACTCTAAAGAAAGTGTATCTGATTCTAGGCTAGGTCCAGAGGAAGCAGGGTaGAGGTCACCAAGTGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: THQLVLYSKESVSDSRLGPEEAG*RSPSDW Trigger: CCAGTCACTTGGTGACCTTCACCCTGCTTCCTCTGG...ACCTAGCCTAGAATCAGATACACTTTCTTTAGAGTAAAGCACAAGCTGATGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR TCA 90 bp | CGGCCCCAACCAACACCCCTGACTGCTAACTTTACAGACTTGTTTCAGTCTATTGAGAAGTTTATGGAGTaGAGGCCAATTTCCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RPQPTPLTANFTDLFQSIEKFME*RPISRG Trigger: TCCTCTGGAAATTGGCCTTCACTCCATAAACTTCTC...AATAGACTGAAACAAGTCTGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR TCA 90 bp | CGGCCCCAACCAACACCCCTGACTGCTAACTTTACAGACTTGTTTCAGTCTATTGATTCCAGTCGGCAGTaGTATATCCATTACTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: RPQPTPLTANFTDLFQSIDSSRQ*YIHYCM Trigger: CATGCAGTAATGGATATATCACTGCCGACTGGAATC...AATAGACTGAAACAAGTCTGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CCA 90 bp | AGGATATGTTTTGATAAGGGGCTACAGTTTCAGTGGGTCTCTTCTTCCGGCCCCGGACACAGTTTGGCCTaGAGAATACACATATTCATC | + |
|
Preference number: 4 (lower is better) Translates to: RICFDKGLQFQWVSSSGPGHSLA*RIHIFI Trigger: GATGAATATGTGTATTCTCCAGGCCAAACTGTGTCC...GGGGCCGGAAGAAGAGACCCACTGAAACTGTAGCCCCTTATCAAAACATATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CCA 90 bp | GTGCTTTACTCTAAAGAAAGTGTATCTGATTCTAGGCTAGGTTTCCAAGCCAGACTGCCCTTGGGGAGGTaGGTTAGGATGTTGATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VLYSKESVSDSRLGFQARLPLGR*VRMLMP Trigger: AGGCATCAACATCCTAACCCACCTCCCCAAGGGCAG...TCTGGCTTGGAAACCTAGCCTAGAATCAGATACACTTTCTTTAGAGTAAAGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CCA 90 bp | TCAGTGGGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCTAACTTTACAAATATTCAATCCAGGTaGAGGAATCTAGAGGGTATA | + |
|
Preference number: 4 (lower is better) Translates to: SVGLFFRPQPTPLTANFTNIQSR*RNLEGI Trigger: TATACCCTCTAGATTCCTCCACCTGGATTGAATATT...TGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACCCACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR GCA 90 bp | AAGCAAGGATATGTTTTGATAAGGGGCTACAGTTTCAGTGGGTCTCTTCTTCCGCACACATGTGCAAGCTaGTCCTTCACAGACTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KQGYVLIRGYSFSGSLLPHTCAS*SFTDFL Trigger: CAGAAAGTCTGTGAAGGAGCAGCTTGCACATGTGTG...CGGAAGAAGAGACCCACTGAAACTGTAGCCCCTTATCAAAACATATCCTTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CCA 90 bp | ACTTTACAGACTTGTTTCAGTCTATTGGCACTGACATCTGATAGCCTTGGGGGAGAAAGACTCTTTGCATaGCCCTTTTGGCGTTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TLQTCFSLLALTSDSLGGERLFA*PFWRFP Trigger: AGGGAAACGCCAAAAGGGCCATGCAAAGAGTCTTTC...TCCCCCAAGGCTATCAGATGTCAGTGCCAATAGACTGAAACAAGTCTGTAAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CCA 90 bp | ACTTTACAGACTTGTTTCAGTCTATTGGCACTGACATCTGATAGCCTTGGGGGAAAATGCTTGACAGGATaGACACGTTGTGTCTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLQTCFSLLALTSDSLGGKCLTG*TRCVCG Trigger: CCCACAGACACAACGTGTCCATCCTGTCAAGCATTT...TCCCCCAAGGCTATCAGATGTCAGTGCCAATAGACTGAAACAAGTCTGTAAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR TCA 90 bp | ACTTTACAGACTTGTTTCAGTCTATTGGCACTGACATCTGATAGCCTTGGGGGACATCAGTGTCATGAGTaGTGCTCCTCTTTGTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TLQTCFSLLALTSDSLGGHQCHE*CSSLFP Trigger: TGGAAACAAAGAGGAGCATCACTCATGACACTGATG...TCCCCCAAGGCTATCAGATGTCAGTGCCAATAGACTGAAACAAGTCTGTAAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR TCA 90 bp | ACTCATCAGCTTGTGCTTTACTCTAAAGAAAGTGTATCTGATTCTAGGCTAGGTGAGCCGTTTTCCAGCTaGCACTTCTCAACCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: THQLVLYSKESVSDSRLGEPFSS*HFSTSH Trigger: ATGGCTGGTTGAGAAGTGTCAGCTGGAAAACGGCTC...ACCTAGCCTAGAATCAGATACACTTTCTTTAGAGTAAAGCACAAGCTGATGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR TCA 90 bp | ACTTTACAGACTTGTTTCAGTCTATTGGCACTGACATCTGATAGCCTTGGGGGATTCTCTACAAATGCTTaGCAGGATGGACACGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TLQTCFSLLALTSDSLGGFSTNA*QDGHVV Trigger: CACAACGTGTCCATCCTGTCAAGCATTTGTAGAGAA...TCCCCCAAGGCTATCAGATGTCAGTGCCAATAGACTGAAACAAGTCTGTAAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR GCA 90 bp | CGGCCCCAACCAACACCCCTGACTGCTAACTTTACAGACTTGTTTCAGTCTATTTGCTATAAATCATGGTaGACTGCTTATCTGGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RPQPTPLTANFTDLFQSICYKSW*TAYLVC Trigger: ACAGACCAGATAAGCAGTGCACCATGATTTATAGCA...AATAGACTGAAACAAGTCTGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR GCA 90 bp | CGGCCCCAACCAACACCCCTGACTGCTAACTTTACAGACTTGTTTCAGTCTATTGACTTTATAAGCATATaGAGTCTCTGGTTTACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RPQPTPLTANFTDLFQSIDFISI*SLWFTG Trigger: GCCTGTAAACCAGAGACTGCATATGCTTATAAAGTC...AATAGACTGAAACAAGTCTGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CCA 90 bp | AAGCAAGGATATGTTTTGATAAGGGGCTACAGTTTCAGTGGGTCTCTTCTTCCGAACAGGGTCTTAATGTaGATCCTTCCCAGTTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: KQGYVLIRGYSFSGSLLPNRVLM*ILPSWT Trigger: TGTCCAACTGGGAAGGATCCACATTAAGACCCTGTT...CGGAAGAAGAGACCCACTGAAACTGTAGCCCCTTATCAAAACATATCCTTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CCA 90 bp | CGGCCCCAACCAACACCCCTGACTGCTAACTTTACAGACTTGTTTCAGTCTATTCTAGTGAGAAGTTTATaGAGTGAAGGCCAATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RPQPTPLTANFTDLFQSILVRSL*SEGQFP Trigger: TGGAAATTGGCCTTCACTCCATAAACTTCTCACTAG...AATAGACTGAAACAAGTCTGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CCA 90 bp | ACTTTACAGACTTGTTTCAGTCTATTGGCACTGACATCTGATAGCCTTGGGGGATCACTGAGCCTGAAGTaGCTGGATGCTTCAATATCT | + |
|
Preference number: 4 (lower is better) Translates to: TLQTCFSLLALTSDSLGGSLSLK*LDASIS Trigger: AGATATTGAAGCATCCAGCCACTTCAGGCTCAGTGA...TCCCCCAAGGCTATCAGATGTCAGTGCCAATAGACTGAAACAAGTCTGTAAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CCA 90 bp | AGGATATGTTTTGATAAGGGGCTACAGTTTCAGTGGGTCTCTTCTTCCGGCCCCTTCAGAAACCCAACTTaGAAAAGTTCAAATATCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RICFDKGLQFQWVSSSGPFRNPT*KSSNIR Trigger: CCGGATATTTGAACTTTTCCAAGTTGGGTTTCTGAA...GGGGCCGGAAGAAGAGACCCACTGAAACTGTAGCCCCTTATCAAAACATATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CCA 90 bp | CGGCCCCAACCAACACCCCTGACTGCTAACTTTACAGACTTGTTTCAGTCTATTAGCATATGCAGTCTCTaGTTTACAGGCTTTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RPQPTPLTANFTDLFQSISICSL*FTGFLF Trigger: AAAGAGAAAGCCTGTAAACCAGAGACTGCATATGCT...AATAGACTGAAACAAGTCTGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR TCA 90 bp | CTTGTGCTTTACTCTAAAGAAAGTGTATCTGATTCTAGGCTAGGTTTCCAAGCCCCAGAGAATAGACTCTaGTCTTTACTGACTGGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LVLYSKESVSDSRLGFQAPENRL*SLLTGP Trigger: CGGACCAGTCAGTAAAGATCAGAGTCTATTCTCTGG...GGCTTGGAAACCTAGCCTAGAATCAGATACACTTTCTTTAGAGTAAAGCACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR TCA 90 bp | CCATTTCACAAAGTCGTAACTCATCAGCTTGTGCTTTACTCTAAAGAAAGTGTACATAGCTTTCCCTCTTaGCTCCTTCTGGCACTACCC | + |
|
Preference number: 4 (lower is better) Translates to: PFHKVVTHQLVLYSKESVHSFPS*LLLALP Trigger: GGGTAGTGCCAGAAGGAGTCAAGAGGGAAAGCTATG...TACACTTTCTTTAGAGTAAAGCACAAGCTGATGAGTTACGACTTTGTGAAATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR TCA 90 bp | AAGCAAGGATATGTTTTGATAAGGGGCTACAGTTTCAGTGGGTCTCTTCTTCCGATTGGGAATTTTCCTTaGAAGAGCCGTTTTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KQGYVLIRGYSFSGSLLPIGNFP*KSRFPA Trigger: AGCTGGAAAACGGCTCTTTCAAGGAAAATTCCCAAT...CGGAAGAAGAGACCCACTGAAACTGTAGCCCCTTATCAAAACATATCCTTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR GCA 90 bp | AAGCAAGGATATGTTTTGATAAGGGGCTACAGTTTCAGTGGGTCTCTTCTTCCGAAGAGTTGCATCAAATaGTTCAGTGTAGCCATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KQGYVLIRGYSFSGSLLPKSCIK*FSVAMD Trigger: GTCCATGGCTACACTGAAGCATTTGATGCAACTCTT...CGGAAGAAGAGACCCACTGAAACTGTAGCCCCTTATCAAAACATATCCTTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CCA 90 bp | CCATTTCACAAAGTCGTAACTCATCAGCTTGTGCTTTACTCTAAAGAAAGTGTAAGACAGTCTCCCGTTTaGCTGGCTTCAAGTCGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PFHKVVTHQLVLYSKESVRQSPV*LASSRH Trigger: GTGACGACTTGAAGCCAGCCAAACGGGAGACTGTCT...TACACTTTCTTTAGAGTAAAGCACAAGCTGATGAGTTACGACTTTGTGAAATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CCA 90 bp | CCATTTCACAAAGTCGTAACTCATCAGCTTGTGCTTTACTCTAAAGAAAGTGTATCATCTGGAGACAGATaGACCTGGAGCTGGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PFHKVVTHQLVLYSKESVSSGDR*TWSWLP Trigger: TGGCAACCAGCTCCAGGTCCATCTGTCTCCAGATGA...TACACTTTCTTTAGAGTAAAGCACAAGCTGATGAGTTACGACTTTGTGAAATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR TCA 90 bp | AAGCAAGGATATGTTTTGATAAGGGGCTACAGTTTCAGTGGGTCTCTTCTTCCGCTACAAGCAGTCCTTTaGCACTCAAAATCCTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KQGYVLIRGYSFSGSLLPLQAVL*HSKSFQ Trigger: TTGAAAGGATTTTGAGTGTCAAAGGACTGCTTGTAG...CGGAAGAAGAGACCCACTGAAACTGTAGCCCCTTATCAAAACATATCCTTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR GCA 90 bp | ACTTTACAGACTTGTTTCAGTCTATTGGCACTGACATCTGATAGCCTTGGGGGAGCTTTGTGCATCATCTaGTTCTCCTCATCTTTTATG | + |
|
Preference number: 4 (lower is better) Translates to: TLQTCFSLLALTSDSLGGALCII*FSSSFM Trigger: CATAAAAGATGAGGAGAAGCAGATGATGCACAAAGC...TCCCCCAAGGCTATCAGATGTCAGTGCCAATAGACTGAAACAAGTCTGTAAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR GCA 90 bp | CCATTTCACAAAGTCGTAACTCATCAGCTTGTGCTTTACTCTAAAGAAAGTGTAGGACCTGGAGCTGGTTaGCACACTTCTCCTCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: PFHKVVTHQLVLYSKESVGPGAG*HTSPQY Trigger: ATATTGAGGAGAAGTGTGGCAACCAGCTCCAGGTCC...TACACTTTCTTTAGAGTAAAGCACAAGCTGATGAGTTACGACTTTGTGAAATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR GCA 90 bp | AAGCAAGGATATGTTTTGATAAGGGGCTACAGTTTCAGTGGGTCTCTTCTTCCGTTCTTTGAACACCTTTaGCTTGAGTGTATCAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: KQGYVLIRGYSFSGSLLPFFEHL*LECISN Trigger: GTTGCTGATACACTCAAGGCAAAGGTGTTCAAAGAA...CGGAAGAAGAGACCCACTGAAACTGTAGCCCCTTATCAAAACATATCCTTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CCA 90 bp | ACTTTACAGACTTGTTTCAGTCTATTGGCACTGACATCTGATAGCCTTGGGGGATATTTTGTCGATATATaGGCTCTTGGGGGTAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: TLQTCFSLLALTSDSLGGYFVDI*ALGGNH Trigger: ATGGTTACCCCCAAGAGCCCATATATCGACAAAATA...TCCCCCAAGGCTATCAGATGTCAGTGCCAATAGACTGAAACAAGTCTGTAAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CCA 90 bp | AAAGTCGTAACTCATCAGCTTGTGCTTTACTCTAAAGAAAGTGTATCTGATTCTTCTGGAACACACATCTaGAGGGCCTGGAGGTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KVVTHQLVLYSKESVSDSSGTHI*RAWRCE Trigger: TTCACACCTCCAGGCCCTCCAGATGTGTGTTCCAGA...AGAATCAGATACACTTTCTTTAGAGTAAAGCACAAGCTGATGAGTTACGACTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CCA 90 bp | ACTCATCAGCTTGTGCTTTACTCTAAAGAAAGTGTATCTGATTCTAGGCTAGGTGACACGTTGTGTCTGTaGGCCAATATTCAATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: THQLVLYSKESVSDSRLGDTLCL*ANIQSR Trigger: CCTGGATTGAATATTGGCCCACAGACACAACGTGTC...ACCTAGCCTAGAATCAGATACACTTTCTTTAGAGTAAAGCACAAGCTGATGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR TCA 90 bp | AAAGTCGTAACTCATCAGCTTGTGCTTTACTCTAAAGAAAGTGTATCTGATTCTCTTTTGGGAACGCGATaGATTTCCCATAGCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KVVTHQLVLYSKESVSDSLLGTR*ISHSQL Trigger: GAGCTGGCTATGGGAAATTCATCGCGTTCCCAAAAG...AGAATCAGATACACTTTCTTTAGAGTAAAGCACAAGCTGATGAGTTACGACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR TCA 90 bp | CTTGTGCTTTACTCTAAAGAAAGTGTATCTGATTCTAGGCTAGGTTTCCAAGCCGAACCTCTTTGCCCATaGTTAAATACTGCTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LVLYSKESVSDSRLGFQAEPLCP*LNTASL Trigger: AAGGGAAGCAGTATTTAATCATGGGCAAAGAGGTTC...GGCTTGGAAACCTAGCCTAGAATCAGATACACTTTCTTTAGAGTAAAGCACAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR GCA 90 bp | ACTTTACAGACTTGTTTCAGTCTATTGGCACTGACATCTGATAGCCTTGGGGGAAAAGTTTCTCTCTTGTaGCGTACTGTACAATTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TLQTCFSLLALTSDSLGGKVSLL*RTVQFC Trigger: GCAAAATTGTACAGTACGGCACAAGAGAGAAACTTT...TCCCCCAAGGCTATCAGATGTCAGTGCCAATAGACTGAAACAAGTCTGTAAAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR GCA 90 bp | GTGCTTTACTCTAAAGAAAGTGTATCTGATTCTAGGCTAGGTTTCCAAGCCAGAATTCCAATGGTTTCCTaGTTCCAGGTAGTGGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VLYSKESVSDSRLGFQARIPMVS*FQVVEN Trigger: GTTTTCCACTACCTGGAAGCAGGAAACCATTGGAAT...TCTGGCTTGGAAACCTAGCCTAGAATCAGATACACTTTCTTTAGAGTAAAGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CCA 90 bp | ACTCATCAGCTTGTGCTTTACTCTAAAGAAAGTGTATCTGATTCTAGGCTAGGTCTTTTGGCGTTTCCCTaGACTTTATACACAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: THQLVLYSKESVSDSRLGLLAFP*TLYTAL Trigger: CAGAGCTGTGTATAAAGTCCAGGGAAACGCCAAAAG...ACCTAGCCTAGAATCAGATACACTTTCTTTAGAGTAAAGCACAAGCTGATGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR TCA 90 bp | AAAGTCGTAACTCATCAGCTTGTGCTTTACTCTAAAGAAAGTGTATCTGATTCTCCTTCACAGACTTTCTaGAGCCTGGTGTCAGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: KVVTHQLVLYSKESVSDSPSQTF*SLVSEM Trigger: CATTTCTGACACCAGGCTTCAGAAAGTCTGTGAAGG...AGAATCAGATACACTTTCTTTAGAGTAAAGCACAAGCTGATGAGTTACGACTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR TCA 90 bp | GTGCTTTACTCTAAAGAAAGTGTATCTGATTCTAGGCTAGGTTTCCAAGCCAGAGAGTCGCAGTGTACTTaGCAAAAACATTTTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLYSKESVSDSRLGFQARESQCT*QKHFLQ Trigger: CTGAAGAAAATGTTTTTGTCAAGTACACTGCGACTC...TCTGGCTTGGAAACCTAGCCTAGAATCAGATACACTTTCTTTAGAGTAAAGCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CCA 90 bp | CCATTTCACAAAGTCGTAACTCATCAGCTTGTGCTTTACTCTAAAGAAAGTGTAATACACGTGAGAGACTaGGCTTTCTTCTCTAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PFHKVVTHQLVLYSKESVIHVRD*AFFSRN Trigger: GTTCCTAGAGAAGAAAGCCCAGTCTCTCACGTGTAT...TACACTTTCTTTAGAGTAAAGCACAAGCTGATGAGTTACGACTTTGTGAAATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CCA 90 bp | CCATTTCACAAAGTCGTAACTCATCAGCTTGTGCTTTACTCTAAAGAAAGTGTAGCAGCTGTTTTCTTTTaGGAACGCGATGAATTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PFHKVVTHQLVLYSKESVAAVFF*ERDEFP Trigger: GGGAAATTCATCGCGTTCCCAAAAGAAAACAGCTGC...TACACTTTCTTTAGAGTAAAGCACAAGCTGATGAGTTACGACTTTGTGAAATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR TCA 90 bp | AAAGTCGTAACTCATCAGCTTGTGCTTTACTCTAAAGAAAGTGTATCTGATTCTGAATCAAAAGAGATCTaGGCAACTCCGTCAACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: KVVTHQLVLYSKESVSDSESKEI*ATPSTN Trigger: GTTGGTTGACGGAGTTGCTCAGATCTCTTTTGATTC...AGAATCAGATACACTTTCTTTAGAGTAAAGCACAAGCTGATGAGTTACGACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR GCA 90 bp | CCATTTCACAAAGTCGTAACTCATCAGCTTGTGCTTTACTCTAAAGAAAGTGTATGTCTGAAATGCCAATaGCTTGAATTTCCCAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: PFHKVVTHQLVLYSKESVCLKCQ*LEFPKS Trigger: CGACTTGGGAAATTCAAGGCATTGGCATTTCAGACA...TACACTTTCTTTAGAGTAAAGCACAAGCTGATGAGTTACGACTTTGTGAAATGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR GCA 90 bp | ACTCATCAGCTTGTGCTTTACTCTAAAGAAAGTGTATCTGATTCTAGGCTAGGTTGTTCTTCTATTTTCTaGCTTAGGAGATGCAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: THQLVLYSKESVSDSRLGCSSIF*LRRCRF Trigger: AAACCTGCATCTCCTAAGGCAGAAAATAGAAGAACA...ACCTAGCCTAGAATCAGATACACTTTCTTTAGAGTAAAGCACAAGCTGATGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR GCA 90 bp | AAAGTCGTAACTCATCAGCTTGTGCTTTACTCTAAAGAAAGTGTATCTGATTCTCCCATGATTAAATACTaGTTCCCTTTCACCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KVVTHQLVLYSKESVSDSPMIKY*FPFTRL Trigger: CAACCTGGTGAAAGGGAAGCAGTATTTAATCATGGG...AGAATCAGATACACTTTCTTTAGAGTAAAGCACAAGCTGATGAGTTACGACTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CCA 90 bp | CTTGTGCTTTACTCTAAAGAAAGTGTATCTGATTCTAGGCTAGGTTTCCAAGCCATAGCAGCATTTCTTTaGCACACTATGTTTGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: LVLYSKESVSDSRLGFQAIAAFL*HTMFVL Trigger: AAGTACAAACATAGTGTGCCAAAGAAATGCTGCTAT...GGCTTGGAAACCTAGCCTAGAATCAGATACACTTTCTTTAGAGTAAAGCACAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR TCA 90 bp | AAAGTCGTAACTCATCAGCTTGTGCTTTACTCTAAAGAAAGTGTATCTGATTCTACAGAACTTTGTCCCTaGGGTCATATAGTTGTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KVVTHQLVLYSKESVSDSTELCP*GHIVVN Trigger: GTTTACAACTATATGACCTCAGGGACAAAGTTCTGT...AGAATCAGATACACTTTCTTTAGAGTAAAGCACAAGCTGATGAGTTACGACTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CCA 90 bp | AAAGTCGTAACTCATCAGCTTGTGCTTTACTCTAAAGAAAGTGTATCTGATTCTTCGCACAACAGAATATaGTATGTTCATCTCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KVVTHQLVLYSKESVSDSSHNRI*YVHLQE Trigger: TTCCTGGAGATGAACATACCATATTCTGTTGTGCGA...AGAATCAGATACACTTTCTTTAGAGTAAAGCACAAGCTGATGAGTTACGACTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CAA 90 bp | GGCTACAGTTTCAGTGGGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCGGGAGGACCCGGATGTaGACTCCTCCTTGCTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GYSFSGSLLPAPTNTPDCGRTRM*TPPCWA Trigger: AGCCCAGCAAGGAGGAGTCAACATCCGGGTCCTCCC...GCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACCCACTGAAACTGTAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS TCA 90 bp | GAGCCCTCTATCCTCTGGAACACACATCTGGAGGGCCTGGAGGTGTaGAGGCTAGCAGCTGAGCTTCCTGAAGTGCAGATCCCCTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: EPSILWNTHLEGLEV*RLAAELPEVQIPST Trigger: TGTGGAGGGGATCTGCACTTCAGGAAGCTCAGCTGCTAGCCTTCACACCTCCAGGCCCTCCAGATGTGTGTTCCAGAGGATAGAGGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CAA 90 bp | GCTACAGTTTCAGTGGGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCTGTGGATCCTTCCCAGTaGGACAGGTTTATGGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ATVSVGLFFRPQPTPLTAVDPSQ*DRFMGA Trigger: AGCCCCCATAAACCTGTCCAACTGGGAAGGATCCAC...AGCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACCCACTGAAACTGTAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CCA 90 bp | GGAGCTATGCTCATGAGCTCTGCCTCTGCACTGCCCTTGGGGAGGTaGGTTAGGATGTTGATGCCTTCCTTACTCAGAACCGTGGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: GAMLMSSASALPLGR*VRMLMPSLLRTVDK Trigger: CTTGTCCACGGTTCTGAGTAAGGAAGGCATCAACATCCTAACCCACCTCCCCAAGGGCAGTGCAGAGGCAGAGCTCATGAGCATAGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CAA 90 bp | GCTACAGTTTCAGTGGGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCTTGGACCTGGAGCTGGTaGCCACACTTCTCCTCAATA | + |
|
Preference number: 5 (lower is better) Translates to: ATVSVGLFFRPQPTPLTAWTWSW*PHFSSI Trigger: TATTGAGGAGAAGTGTGGCAACCAGCTCCAGGTCCA...AGCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACCCACTGAAACTGTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS TCA 90 bp | CTGCTTCCAGGTAGTGGAAAACATAGAACACCGGAGCTATGCTCATaGGCTCTGCCTCTGCACTGCCCTTGGGGAGGTGGGTTAGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: LLPGSGKHRTPELCS*ALPLHCPWGGGLGC Trigger: ACATCCTAACCCACCTCCCCAAGGGCAGTGCAGAGGCAGAGCTCATGAGCATAGCTCCGGTGTTCTATGTTTTCCACTACCTGGAAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CAA 90 bp | CGGCCCCAACCAACACCCCTGACTGCTAACTTTACAGACTTGTTTCAGTCTATTGCCTCTGCACTGCCCTaGGGGAGGTGGGTTAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: RPQPTPLTANFTDLFQSIASALP*GRWVRM Trigger: CATCCTAACCCACCTCCCCAAGGGCAGTGCAGAGGC...AATAGACTGAAACAAGTCTGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS GCA 90 bp | TTTCTGGAGTCTGCAGAGATGGCTAGGTCTACTTCTGCCTGCAGTTaGGCACAGTCAGCTTCCACACATGTGCAAGCTGCTCCTTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: FLESAEMARSTSACS*AQSASTHVQAAPSQ Trigger: CTGTGAAGGAGCAGCTTGCACATGTGTGGAAGCTGACTGTGCGCAACTGCAGGCAGAAGTAGACCTAGCCATCTCTGCAGACTCCAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS TCA 90 bp | TTGTGCCATCAGAGTTACTGGGACCCCTCCTACCGCCTGCTCGAGTaGATCTTTAACCTGTGCCTTGATGGAAAATGGAATCCCGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LCHQSYWDPSYRLLE*IFNLCLDGKWNPGL Trigger: AAGCCCGGGATTCCATTTTCCATCAAGGCACAGGTTAAAGATTCACTCGAGCAGGCGGTAGGAGGGGTCCCAGTAACTCTGATGGCACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS GCA 90 bp | GGTCTACTTCTGCCTGCAGTTGCGCACAGTCAGCTTCCACACATGTaGAAGCTGCTCCTTCACAGACTTTCTGAAGCCTGGTGTCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GLLLPAVAHSQLPHM*KLLLHRLSEAWCQK Trigger: TTTCTGACACCAGGCTTCAGAAAGTCTGTGAAGGAGCAGCTTGCACATGTGTGGAAGCTGACTGTGCGCAACTGCAGGCAGAAGTAGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CAA 90 bp | AGGATATGTTTTGATAAGGGGCTACAGTTTCAGTGGGTCTCTTCTTCCGGCCCCGCGGCTTGTGTGGCTTaGTGCATCATCTGCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RICFDKGLQFQWVSSSGPAACVA*CIICFS Trigger: GGAGAAGCAGATGATGCACAAAGCCACACAAGCCGC...GGGGCCGGAAGAAGAGACCCACTGAAACTGTAGCCCCTTATCAAAACATATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CAA 90 bp | GCTACAGTTTCAGTGGGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCTGTACTCTTTGCTGGCTaGATTTTCTTCGGGAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ATVSVGLFFRPQPTPLTAVLFAG*IFFGKF Trigger: GAACTTCCCGAAGAAAATCAAGCCAGCAAAGAGTAC...AGCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACCCACTGAAACTGTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS TCA 90 bp | GTGAGAAGTTTATGGAGTGAAGGCCAATTTCCAGAGGAAGCAGGGTaGAGGTCACCAAGTGACTGGACGAGCCCTCTATCCTCTGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: VRSLWSEGQFPEEAG*RSPSDWTSPLSSGT Trigger: TGTTCCAGAGGATAGAGGGCTCGTCCAGTCACTTGGTGACCTTCACCCTGCTTCCTCTGGAAATTGGCCTTCACTCCATAAACTTCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028233.7 ENSMUST00000156412.3 |
||
| CDS CCA 90 bp | CAGTCTCTGGTTTACAGGCTTTCTCTTTTCTGGAGTCTGCAGAGATaGCTAGGTCTACTTCTGCCTGCAGTTGCGCACAGTCAGCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QSLVYRLSLFWSLQR*LGLLLPAVAHSQLP Trigger: TGGAAGCTGACTGTGCGCAACTGCAGGCAGAAGTAGACCTAGCCATCTCTGCAGACTCCAGAAAAGAGAAAGCCTGTAAACCAGAGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CAA 90 bp | GCTACAGTTTCAGTGGGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCTGTCCAAACACCATACTaGGGATTAGATGGAATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ATVSVGLFFRPQPTPLTAVQTPY*GLDGIL Trigger: CAAGATTCCATCTAATCCCAAGTATGGTGTTTGGAC...AGCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACCCACTGAAACTGTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CAA 90 bp | GGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCTAACTTTACAGACTTGAGCTTGAAAGACTCTTaGCATGGCCCTTTTGGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: GLFFRPQPTPLTANFTDLSLKDS*HGPFGV Trigger: AACGCCAAAAGGGCCATGCAAAGAGTCTTTCAAGCT...CAAGTCTGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CAA 90 bp | GCTACAGTTTCAGTGGGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCTATACAAAGTTTTCTCTaGGGCTTCAGCAGGCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: ATVSVGLFFRPQPTPLTAIQSFL*GFSRQS Trigger: ACTTTGCCTGCTGAAGCCCAAGAGAAAACTTTGTAT...AGCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACCCACTGAAACTGTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CAA 90 bp | TCAGTGGGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCTAACTTTACAACAACAAGGTCATCATaGAGAGATACCTCCACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SVGLFFRPQPTPLTANFTTTRSS*RDTSTG Trigger: GCCAGTGGAGGTATCTCTCAATGATGACCTTGTTGT...TGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACCCACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS GCA 90 bp | TCGACTGTTTGTGCCATCAGAGTTACTGGGACCCCTCCTACCGCCTaGTCGAGTGAATCTTTAACCTGTGCCTTGATGGAAAATGGAATC | + |
|
Preference number: 5 (lower is better) Translates to: STVCAIRVTGTPPTA*SSESLTCALMENGI Trigger: GATTCCATTTTCCATCAAGGCACAGGTTAAAGATTCACTCGAGCAGGCGGTAGGAGGGGTCCCAGTAACTCTGATGGCACAAACAGTCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS GCA 90 bp | TTCTGCCTGCAGTTGCGCACAGTCAGCTTCCACACATGTGCAAGCTaGTCCTTCACAGACTTTCTGAAGCCTGGTGTCAGAAATGCTATA | + |
|
Preference number: 5 (lower is better) Translates to: FCLQLRTVSFHTCAS*SFTDFLKPGVRNAI Trigger: TATAGCATTTCTGACACCAGGCTTCAGAAAGTCTGTGAAGGAGCAGCTTGCACATGTGTGGAAGCTGACTGTGCGCAACTGCAGGCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CCA 90 bp | GCTACCCATGAGTCTGCTTCAGTCACCATGTCAAGGGACACAGTTTaGCCTGGAGAATACACATATTCATCTGGAGACAGATGGACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ATHESASVTMSRDTV*PGEYTYSSGDRWTW Trigger: CCAGGTCCATCTGTCTCCAGATGAATATGTGTATTCTCCAGGCCAAACTGTGTCCCTTGACATGGTGACTGAAGCAGACTCATGGGTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CCA 90 bp | CCTGGAGAATACACATATTCATCTGGAGACAGATGGACCTGGAGCTaGTTGCCACACTTCTCCTCAATATTTATCCAGACTGCGTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PGEYTYSSGDRWTWS*LPHFSSIFIQTASA Trigger: GGCTGACGCAGTCTGGATAAATATTGAGGAGAAGTGTGGCAACCAGCTCCAGGTCCATCTGTCTCCAGATGAATATGTGTATTCTCCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CAA 90 bp | GGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCTAACTTTACAGACTTGCAAGTCAGATGTCTCTaGATTCACATCGACTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GLFFRPQPTPLTANFTDLQVRCL*IHIDCL Trigger: CAAACAGTCGATGTGAATCAAGAGACATCTGACTTG...CAAGTCTGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CAA 90 bp | ACTTTACAGACTTGTTTCAGTCTATTGGCACTGACATCTGATAGCCTTGGGGGATCATCTGCGTTTGCGTaGGTGAGGAAGGTGAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TLQTCFSLLALTSDSLGGSSAFA*VRKVSP Trigger: TGGGCTCACCTTCCTCACCAACGCAAACGCAGATGA...TCCCCCAAGGCTATCAGATGTCAGTGCCAATAGACTGAAACAAGTCTGTAAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS TCA 90 bp | TGGCTGAGAGACGAGTACGCAACTGCTTCGTACTCTTTGCTGGCTTaGTTTTCTTCGGGAAGTTCTGGGTCATCAGTTCTGATCTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: WLRDEYATASYSLLA*FSSGSSGSSVLISN Trigger: GTTTGAGATCAGAACTGATGACCCAGAACTTCCCGAAGAAAATCAAGCCAGCAAAGAGTACGAAGCAGTTGCGTACTCGTCTCTCAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS TCA 90 bp | TTATCCAGACTGCGTCAGCCACTAATTCTGCTGTTTGCTCCCCTGTaGCTATGTAATAGACCAGGAGTCGTGCTGAAGGAACCATGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSRLRQPLILLFAPL*LCNRPGVVLKEPCS Trigger: AGAACATGGTTCCTTCAGCACGACTCCTGGTCTATTACATAGTCACAGGGGAGCAAACAGCAGAATTAGTGGCTGACGCAGTCTGGATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS TCA 90 bp | TGCCAATGCCTTGAATTTCCCAAGTCGTTAGTGAGTCAGGCAGCGTaGCCTGCAGCTGTTTTCTTTTGGGAACGCGATGAATTTCCCATA | + |
|
Preference number: 5 (lower is better) Translates to: CQCLEFPKSLVSQAA*PAAVFFWERDEFPI Trigger: TATGGGAAATTCATCGCGTTCCCAAAAGAAAACAGCTGCAGGTCACGCTGCCTGACTCACTAACGACTTGGGAAATTCAAGGCATTGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CAA 90 bp | CGGCCCCAACCAACACCCCTGACTGCTAACTTTACAGACTTGTTTCAGTCTATTAGGTGGGTTAGGATGTaGATGCCTTCCTTACTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RPQPTPLTANFTDLFQSIRWVRM*MPSLLR Trigger: TCTGAGTAAGGAAGGCATCAACATCCTAACCCACCT...AATAGACTGAAACAAGTCTGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS GCA 90 bp | CCAAGCGATGTAAATGTAACTTTGGCTGAGAGACGAGTACGCAACTaGTTCGTACTCTTTGCTGGCTTGATTTTCTTCGGGAAGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PSDVNVTLAERRVRN*FVLFAGLIFFGKFW Trigger: CCAGAACTTCCCGAAGAAAATCAAGCCAGCAAAGAGTACGAAGCAGTTGCGTACTCGTCTCTCAGCCAAAGTTACATTTACATCGCTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CCA 90 bp | CAAAAGAGATCTGAGCAACTCCGTCAACCAACTTTGCGGCTTGTGTaGCTTTGTGCATCATCTGCTTCTCCTCATCTTTTATGTCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: QKRSEQLRQPTLRLV*LCASSASPHLLCPL Trigger: GAGAGGACATAAAAGATGAGGAGAAGCAGATGATGCACAAAGCCACACAAGCCGCAAAGTTGGTTGACGGAGTTGCTCAGATCTCTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CCA 90 bp | GCCTTCATCACTGGTAACAGGGTCTTAATGTGGATCCTTCCCAGTTaGACAGGTTTATGGGGGCTTTCTTTTCGGATCTTGTTCGCAATA | + |
|
Preference number: 5 (lower is better) Translates to: AFITGNRVLMWILPS*TGLWGLSFRILFAI Trigger: TATTGCGAACAAGATCCGAAAAGAAAGCCCCCATAAACCTGTCCAACTGGGAAGGATCCACATTAAGACCCTGTTACCAGTGATGAAGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CCA 90 bp | CTTCCACACATGTGCAAGCTGCTCCTTCACAGACTTTCTGAAGCCTaGTGTCAGAAATGCTATAAATCATGGTGCACTGCTTATCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LPHMCKLLLHRLSEA*CQKCYKSWCTAYLV Trigger: GACCAGATAAGCAGTGCACCATGATTTATAGCATTTCTGACACCAGGCTTCAGAAAGTCTGTGAAGGAGCAGCTTGCACATGTGTGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CAA 90 bp | AAGCAAGGATATGTTTTGATAAGGGGCTACAGTTTCAGTGGGTCTCTTCTTCCGGGAGAGAGGACATATTaGACTCCAGGGATTTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: KQGYVLIRGYSFSGSLLPGERTY*TPGISA Trigger: GGCAGAAATCCCTGGAGTCAAATATGTCCTCTCTCC...CGGAAGAAGAGACCCACTGAAACTGTAGCCCCTTATCAAAACATATCCTTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CAA 90 bp | AGGATATGTTTTGATAAGGGGCTACAGTTTCAGTGGGTCTCTTCTTCCGGCCCCGCAACACATATACCATaGTCTGAAATGCCAATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RICFDKGLQFQWVSSSGPATHIP*SEMPMP Trigger: AGGCATTGGCATTTCAGACAATGGTATATGTGTTGC...GGGGCCGGAAGAAGAGACCCACTGAAACTGTAGCCCCTTATCAAAACATATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CAA 90 bp | AGGATATGTTTTGATAAGGGGCTACAGTTTCAGTGGGTCTCTTCTTCCGGCCCCTTGAACACCTTTGCCTaGAGTGTATCAGCAACACAT | + |
|
Preference number: 5 (lower is better) Translates to: RICFDKGLQFQWVSSSGPLNTFA*SVSATH Trigger: ATGTGTTGCTGATACACTCAAGGCAAAGGTGTTCAA...GGGGCCGGAAGAAGAGACCCACTGAAACTGTAGCCCCTTATCAAAACATATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CAA 90 bp | ACTTTACAGACTTGTTTCAGTCTATTGGCACTGACATCTGATAGCCTTGGGGGAGGGGATCGAATTCAGTaGCAGAATGACATGGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: TLQTCFSLLALTSDSLGGGDRIQ*QNDMAI Trigger: GATGGCCATGTCATTCTGCAACTGAATTCGATCCCC...TCCCCCAAGGCTATCAGATGTCAGTGCCAATAGACTGAAACAAGTCTGTAAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CAA 90 bp | GGTCTCTTCTTCCGGCCCCAACCAACACCCCTGACTGCTAACTTTACAGACTTGAAACTGAAATTGTGTTaGATCTGCAGAACCTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GLFFRPQPTPLTANFTDLKLKLC*ICRTSL Trigger: CAAAGAGGTTCTGCAGATCAAACACAATTTCAGTTT...CAAGTCTGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCGGAAGAAGAGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS TCA 90 bp | CTTTGCTGGCTTGATTTTCTTCGGGAAGTTCTGGGTCATCAGTTCTaGTCTCAAACTTTAGCACCGTCACATTTGATGGGAGGTTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LCWLDFLREVLGHQF*SQTLAPSHLMGGSA Trigger: TGCTGAACCTCCCATCAAATGTGACGGTGCTAAAGTTTGAGATCAGAACTGATGACCCAGAACTTCCCGAAGAAAATCAAGCCAGCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS TCA 90 bp | TGGGCTTGTAGTTTTCAGTCCAAGCGATGTAAATGTAACTTTGGCTaGGAGACGAGTACGCAACTGCTTCGTACTCTTTGCTGGCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: WACSFQSKRCKCNFG*ETSTQLLRTLCWLD Trigger: ATCAAGCCAGCAAAGAGTACGAAGCAGTTGCGTACTCGTCTCTCAGCCAAAGTTACATTTACATCGCTTGGACTGAAAACTACAAGCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CCA 90 bp | CACTCTTTTCATCCAAAGCTTGAAAGACTCTTTGCATGGCCCTTTTaGCGTTTCCCTGGACTTTATACACAGCTCTGTCCACTGCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: HSFHPKLERLFAWPF*RFPGLYTQLCPLLI Trigger: TATCAGCAGTGGACAGAGCTGTGTATAAAGTCCAGGGAAACGCCAAAAGGGCCATGCAAAGAGTCTTTCAAGCTTTGGATGAAAAGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CCA 90 bp | CAGTCTCTGGTTTACAGGCTTTCTCTTTTCTGGAGTCTGCAGAGATaGCTAGGTCTACTTCTGCCACTACCCGTAATGTCTTTACTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: QSLVYRLSLFWSLQR*LGLLLPLPVMSLLR Trigger: TCTTAGTAAAGACATTACGGGTAGTGGCAGAAGTAGACCTAGCCATCTCTGCAGACTCCAGAAAAGAGAAAGCCTGTAAACCAGAGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156412.3 |
||
| CDS-3UTR CAA 90 bp | CTTGTGCTTTACTCTAAAGAAAGTGTATCTGATTCTAGGCTAGGTTTCCAAGCCAAGACAGTCTCCCGTTaGGCTGGCTTCAAGTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LVLYSKESVSDSRLGFQAKTVSR*AGFKSS Trigger: TGACGACTTGAAGCCAGCCAAACGGGAGACTGTCTT...GGCTTGGAAACCTAGCCTAGAATCAGATACACTTTCTTTAGAGTAAAGCACAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CAA 90 bp | ACTTTACAGACTTGTTTCAGTCTATTGGCACTGACATCTGATAGCCTTGGGGGATTAGCACCGTCACATTaGATGGGAGGTTCAGCACAA | + |
|
Preference number: 5 (lower is better) Translates to: TLQTCFSLLALTSDSLGGLAPSH*MGGSAQ Trigger: TTGTGCTGAACCTCCCATCAAATGTGACGGTGCTAA...TCCCCCAAGGCTATCAGATGTCAGTGCCAATAGACTGAAACAAGTCTGTAAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CAA 90 bp | ACTTTACAGACTTGTTTCAGTCTATTGGCACTGACATCTGATAGCCTTGGGGGAGTCAAGGGACACAGTTaGGCCTGGAGAATACACATA | + |
|
Preference number: 5 (lower is better) Translates to: TLQTCFSLLALTSDSLGGVKGHS*AWRIHI Trigger: TATGTGTATTCTCCAGGCCAAACTGTGTCCCTTGAC...TCCCCCAAGGCTATCAGATGTCAGTGCCAATAGACTGAAACAAGTCTGTAAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CAA 90 bp | CGGCCCCAACCAACACCCCTGACTGCTAACTTTACAGACTTGTTTCAGTCTATTCTTTTCATCCAAAGCTaGAAAGACTCTTTGCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: RPQPTPLTANFTDLFQSILFIQS*KDSLHG Trigger: GCCATGCAAAGAGTCTTTCAAGCTTTGGATGAAAAG...AATAGACTGAAACAAGTCTGTAAAGTTAGCAGTCAGGGGTGTTGGTTGGGGCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CAA 90 bp | CTTGTGCTTTACTCTAAAGAAAGTGTATCTGATTCTAGGCTAGGTTTCCAAGCCTGGAATACATCTGCATaGTCATGGCCACCACCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LVLYSKESVSDSRLGFQAWNTSA*SWPPPA Trigger: GGCAGGTGGTGGCCATGACAATGCAGATGTATTCCA...GGCTTGGAAACCTAGCCTAGAATCAGATACACTTTCTTTAGAGTAAAGCACAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS TCA 90 bp | ATGGGAGGTTCAGCACAAACACAGCTACTCCATCAGTGTCATGAGTaGTGCTCCTCTTTGTTTCCAAGTCAGATGTCTCTTGATTCACAT | + |
|
Preference number: 5 (lower is better) Translates to: MGGSAQTQLLHQCHE*CSSLFPSQMSLDSH Trigger: ATGTGAATCAAGAGACATCTGACTTGGAAACAAAGAGGAGCATCACTCATGACACTGATGGAGTAGCTGTGTTTGTGCTGAACCTCCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS GCA 90 bp | TGTTTCAGAATCAAAAGAGATCTGAGCAACTCCGTCAACCAACTTTaGGGCTTGTGTGGCTTTGTGCATCATCTGCTTCTCCTCATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: CFRIKRDLSNSVNQL*GLCGFVHHLLLLIF Trigger: AAAGATGAGGAGAAGCAGATGATGCACAAAGCCACACAAGCCGCAAAGTTGGTTGACGGAGTTGCTCAGATCTCTTTTGATTCTGAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CAA 90 bp | ACTCATCAGCTTGTGCTTTACTCTAAAGAAAGTGTATCTGATTCTAGGCTAGGTCTCCGTCAACCAACTTaGCGGCTTGTGTGGCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: THQLVLYSKESVSDSRLGLRQPT*RLVWLC Trigger: ACAAAGCCACACAAGCCGCAAAGTTGGTTGACGGAG...ACCTAGCCTAGAATCAGATACACTTTCTTTAGAGTAAAGCACAAGCTGATGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CAA 90 bp | CTTGTGCTTTACTCTAAAGAAAGTGTATCTGATTCTAGGCTAGGTTTCCAAGCCAGTGTGAAGGTGCTCTaGGATGGCAGGGTGTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LVLYSKESVSDSRLGFQASVKVL*DGRVFS Trigger: TGAAAACACCCTGCCATCCAAGAGCACCTTCACACT...GGCTTGGAAACCTAGCCTAGAATCAGATACACTTTCTTTAGAGTAAAGCACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CAA 90 bp | GTGCTTTACTCTAAAGAAAGTGTATCTGATTCTAGGCTAGGTTTCCAAGCCAGATTCCCTTTCACCAGGTaGGCATTGGTACAGCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: VLYSKESVSDSRLGFQARFPFTR*ALVQLI Trigger: GATGAGCTGTACCAATGCCAACCTGGTGAAAGGGAA...TCTGGCTTGGAAACCTAGCCTAGAATCAGATACACTTTCTTTAGAGTAAAGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CCA 90 bp | GTCTTCAGCAAAGTTATTCAAATTCTCTACAAATGCTTGACAGGATaGACACGTTGTGTCTGTGGGCCAATATTCAATCCAGGTGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VFSKVIQILYKCLTG*TRCVCGPIFNPGGG Trigger: TCCTCCACCTGGATTGAATATTGGCCCACAGACACAACGTGTCCATCCTGTCAAGCATTTGTAGAGAATTTGAATAACTTTGCTGAAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CAA 90 bp | AAGCAAGGATATGTTTTGATAAGGGGCTACAGTTTCAGTGGGTCTCTTCTTCCGCTTTCTTTTCGGATCTaGTTCGCAATAGTACAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: KQGYVLIRGYSFSGSLLPLSFRI*FAIVQH Trigger: GTGCTGTACTATTGCGAACAAGATCCGAAAAGAAAG...CGGAAGAAGAGACCCACTGAAACTGTAGCCCCTTATCAAAACATATCCTTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CAA 90 bp | CTTGTGCTTTACTCTAAAGAAAGTGTATCTGATTCTAGGCTAGGTTTCCAAGCCTCCTGTTTTACATACTaGGCCACCTGTCCAAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: LVLYSKESVSDSRLGFQASCFTY*ATCPST Trigger: AGTGCTTGGACAGGTGGCCAAGTATGTAAAACAGGA...GGCTTGGAAACCTAGCCTAGAATCAGATACACTTTCTTTAGAGTAAAGCACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CCA 90 bp | TCAAATTCTCTACAAATGCTTGACAGGATGGACACGTTGTGTCTGTaGGCCAATATTCAATCCAGGTGGAGGAATCTAGAGGGTATATAT | + |
|
Preference number: 5 (lower is better) Translates to: SNSLQMLDRMDTLCL*ANIQSRWRNLEGIY Trigger: ATATATACCCTCTAGATTCCTCCACCTGGATTGAATATTGGCCCACAGACACAACGTGTCCATCCTGTCAAGCATTTGTAGAGAATTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028233.7 ENSMUST00000156412.3 |
||
| CDS-3UTR CAA 90 bp | AAGCAAGGATATGTTTTGATAAGGGGCTACAGTTTCAGTGGGTCTCTTCTTCCGCATAGCAGCATTTCTTaGGCACACTATGTTTGTACT | + |
|
Preference number: 5 (lower is better) Translates to: KQGYVLIRGYSFSGSLLPHSSIS*AHYVCT Trigger: AGTACAAACATAGTGTGCCAAAGAAATGCTGCTATG...CGGAAGAAGAGACCCACTGAAACTGTAGCCCCTTATCAAAACATATCCTTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS TCA 90 bp | TGCTGTTTGCTCCCCTGTGACTATGTAATAGACCAGGAGTCGTGCTaGAGGAACCATGTTCTGTGTCACTGGAATATTTATATTTTGATA | + |
|
Preference number: 5 (lower is better) Translates to: CCLLPCDYVIDQESC*RNHVLCHWNIYILI Trigger: TATCAAAATATAAATATTCCAGTGACACAGAACATGGTTCCTTCAGCACGACTCCTGGTCTATTACATAGTCACAGGGGAGCAAACAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CAA 90 bp | AAGCAAGGATATGTTTTGATAAGGGGCTACAGTTTCAGTGGGTCTCTTCTTCCGTACTTGAAACTGAAATaGTGTTTGATCTGCAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: KQGYVLIRGYSFSGSLLPYLKLK*CLICRT Trigger: GGTTCTGCAGATCAAACACAATTTCAGTTTCAAGTA...CGGAAGAAGAGACCCACTGAAACTGTAGCCCCTTATCAAAACATATCCTTGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS TCA 90 bp | AAAAAGAGGTCTTCAGCAAAGTTATTCAAATTCTCTACAAATGCTTaGCAGGATGGACACGTTGTGTCTGTGGGCCAATATTCAATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KKRSSAKLFKFSTNA*QDGHVVSVGQYSIQ Trigger: CTGGATTGAATATTGGCCCACAGACACAACGTGTCCATCCTGTCAAGCATTTGTAGAGAATTTGAATAACTTTGCTGAAGACCTCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS GCA 90 bp | TATTATGCGCTTGAATCCAGAGTCACTGAGCCTGAAGTGGCTGGATaGTTCAATATCTTGGGTATCAATTTTCAAGTAAAAGCTGCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: YYALESRVTEPEVAG*FNILGINFQVKAAK Trigger: TTTTGCAGCTTTTACTTGAAAATTGATACCCAAGATATTGAAGCATCCAGCCACTTCAGGCTCAGTGACTCTGGATTCAAGCGCATAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS GCA 90 bp | AAATTGTGTTTGATCTGCAGAACCTCTTTGCCCATGATTAAATACTaGTTCCCTTTCACCAGGTTGGCATTGGTACAGCTCATCTTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: KLCLICRTSLPMIKY*FPFTRLALVQLIFL Trigger: TAAAAAGATGAGCTGTACCAATGCCAACCTGGTGAAAGGGAAGCAGTATTTAATCATGGGCAAAGAGGTTCTGCAGATCAAACACAATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028233.7 ENSMUST00000156412.3 |
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| CDS-3UTR CAA 90 bp | ACTCATCAGCTTGTGCTTTACTCTAAAGAAAGTGTATCTGATTCTAGGCTAGGTATCTGCAGAACCTCTTaGCCCATGATTAAATACTGC | + |
|
Preference number: 5 (lower is better) Translates to: THQLVLYSKESVSDSRLGICRTS*PMIKYC Trigger: GCAGTATTTAATCATGGGCAAAGAGGTTCTGCAGAT...ACCTAGCCTAGAATCAGATACACTTTCTTTAGAGTAAAGCACAAGCTGATGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR CAA 90 bp | ACTCATCAGCTTGTGCTTTACTCTAAAGAAAGTGTATCTGATTCTAGGCTAGGTATTCTCTACAAATGCTaGACAGGATGGACACGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: THQLVLYSKESVSDSRLGILYKC*TGWTRC Trigger: ACAACGTGTCCATCCTGTCAAGCATTTGTAGAGAAT...ACCTAGCCTAGAATCAGATACACTTTCTTTAGAGTAAAGCACAAGCTGATGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CAA 90 bp | CTTGTGCTTTACTCTAAAGAAAGTGTATCTGATTCTAGGCTAGGTTTCCAAGCCGGATTAGATGGAATCTaGAAGTCAGGAAAAGAGATA | + |
|
Preference number: 5 (lower is better) Translates to: LVLYSKESVSDSRLGFQAGLDGI*KSGKEI Trigger: TATCTCTTTTCCTGACTTCAAGATTCCATCTAATCC...GGCTTGGAAACCTAGCCTAGAATCAGATACACTTTCTTTAGAGTAAAGCACAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CAA 90 bp | CTTGTGCTTTACTCTAAAGAAAGTGTATCTGATTCTAGGCTAGGTTTCCAAGCCTTTGTACTTAGCAGCTaGTTCTTCTATTTTCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LVLYSKESVSDSRLGFQAFVLSS*FFYFLP Trigger: AGGCAGAAAATAGAAGAACAAGCTGCTAAGTACAAA...GGCTTGGAAACCTAGCCTAGAATCAGATACACTTTCTTTAGAGTAAAGCACAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR CAA 90 bp | AAAGTCGTAACTCATCAGCTTGTGCTTTACTCTAAAGAAAGTGTATCTGATTCTAACAGTTCCTTTCAATaGGATCTGTTCTCCTCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: KVVTHQLVLYSKESVSDSNSSFQ*DLFSSH Trigger: GTGCGAGGAGAACAGATCCAATTGAAAGGAACTGTT...AGAATCAGATACACTTTCTTTAGAGTAAAGCACAAGCTGATGAGTTACGACTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS-3UTR CAA 90 bp | CCATTTCACAAAGTCGTAACTCATCAGCTTGTGCTTTACTCTAAAGAAAGTGTATTCACCAGGTTGGCATaGGTACAGCTCATCTTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: PFHKVVTHQLVLYSKESVFTRLA*VQLIFL Trigger: TAAAAAGATGAGCTGTACCAATGCCAACCTGGTGAA...TACACTTTCTTTAGAGTAAAGCACAAGCTGATGAGTTACGACTTTGTGAAATGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS GCA 90 bp | TTTGGCACACTATGTTTGTACTTAGCAGCTTGTTCTTCTATTTTCTaGCTTAGGAGATGCAGGTTTCTCTTTGACCTGAGAATTTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: FGTLCLYLAACSSIF*LRRCRFLFDLRISL Trigger: TAAAGAAATTCTCAGGTCAAAGAGAAACCTGCATCTCCTAAGGCAGAAAATAGAAGAACAAGCTGCTAAGTACAAACATAGTGTGCCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS GCA 90 bp | GAATCTAGAGGGTATATATACTTGAAACTGAAATTGTGTTTGATCTaGAGAACCTCTTTGCCCATGATTAAATACTGCTTCCCTTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: ESRGYIYLKLKLCLI*RTSLPMIKYCFPFT Trigger: GGTGAAAGGGAAGCAGTATTTAATCATGGGCAAAGAGGTTCTGCAGATCAAACACAATTTCAGTTTCAAGTATATATACCCTCTAGATTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028233.7 ENSMUST00000156412.3 |
||
| CDS-3UTR CAA 90 bp | CCATTTCACAAAGTCGTAACTCATCAGCTTGTGCTTTACTCTAAAGAAAGTGTAAGTGTAGCCATGGACTaGAATTACCACATTTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PFHKVVTHQLVLYSKESVSVAMD*NYHIFR Trigger: TCTGAAAATGTGGTAATTCAAGTCCATGGCTACACT...TACACTTTCTTTAGAGTAAAGCACAAGCTGATGAGTTACGACTTTGTGAAATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CAA 90 bp | AAAGTCGTAACTCATCAGCTTGTGCTTTACTCTAAAGAAAGTGTATCTGATTCTTCGATATATGGGCTCTaGGGGGTAACCATAATATTC | + |
|
Preference number: 5 (lower is better) Translates to: KVVTHQLVLYSKESVSDSSIYGL*GVTIIF Trigger: GAATATTATGGTTACCCCCAAGAGCCCATATATCGA...AGAATCAGATACACTTTCTTTAGAGTAAAGCACAAGCTGATGAGTTACGACTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS TCA 90 bp | TCACCTTATACTTGTGGAAGTCACCTTCGTGTTTGTAGGCGACATTaGTGTCCATATCCAAATGAATTTGTTTTAACAGGAGTGAATATT | + |
|
Preference number: 5 (lower is better) Translates to: SPYTCGSHLRVCRRH*CPYPNEFVLTGVNI Trigger: AATATTCACTCCTGTTAAAACAAATTCATTTGGATATGGACATCAATGTCGCCTACAAACACGAAGGTGACTTCCACAAGTATAAGGTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS-3UTR CAA 90 bp | CCATTTCACAAAGTCGTAACTCATCAGCTTGTGCTTTACTCTAAAGAAAGTGTAAGAGTCGCAGTGTACTaGACAAAAACATTTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PFHKVVTHQLVLYSKESVRVAVY*TKTFSS Trigger: TGAAGAAAATGTTTTTGTCAAGTACACTGCGACTCT...TACACTTTCTTTAGAGTAAAGCACAAGCTGATGAGTTACGACTTTGTGAAATGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS TCA 72 bp | CTGTGCCGCTGCTGGGCACAGAGCTGTCTGGACGTTTaGGGGTATCTCTCCAGTAACGGTAAATGGGCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: LCRCWAQSCLDV*GYLSSNGKWAD Trigger: ATCCGCCCATTTACCGTTACTGGAGAGATACCCTCAAACGTCCAGACAGCTCTGTGCCCAGCAGCGGCACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CCA 72 bp | CCTTCAGTTTCAGGCTGGCGAGCAAAGCATAGGCTGTaGTTTCAACCATACCTGCTGTGCCGCTGCTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PSVSGWRAKHRL*FQPYLLCRCWA Trigger: TGCCCAGCAGCGGCACAGCAGGTATGGTTGAAACCACAGCCTATGCTTTGCTCGCCAGCCTGAAACTGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS GCA 72 bp | CTGCCTGCAGTTGCGCACAGTCAGCTTCCACACATGTaGAAGCTGCTCCTTCACAGACTTTCTGAAGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LPAVAHSQLPHM*KLLLHRLSEAW Trigger: CCAGGCTTCAGAAAGTCTGTGAAGGAGCAGCTTGCACATGTGTGGAAGCTGACTGTGCGCAACTGCAGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CAA 90 bp | ATGAGCTCTGCCTCTGCACTGCCCTTGGGGAGGTGGGTTAGGATGTaGATGCCTTCCTTACTCAGAACCGTGGACAAGAACTCCCCTACA | + |
|
Preference number: 6 (lower is better) Translates to: MSSASALPLGRWVRM*MPSLLRTVDKNSPT Trigger: TGTAGGGGAGTTCTTGTCCACGGTTCTGAGTAAGGAAGGCATCAACATCCTAACCCACCTCCCCAAGGGCAGTGCAGAGGCAGAGCTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS GCA 72 bp | TTACTGCATGGGAGGACCCGGATGTTGACTCCTCCTTaGTGGGCTTGTAGCTGGCACATGCTATTATGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: LLHGRTRMLTPP*WACSWHMLLCA Trigger: AGCGCATAATAGCATGTGCCAGCTACAAGCCCAGCAAGGAGGAGTCAACATCCGGGTCCTCCCATGCAGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS GCA 72 bp | TCTGCAGAGATGGCTAGGTCTACTTCTGCCTGCAGTTaGGCACAGTCAGCTTCCACACATGTGCAAGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SAEMARSTSACS*AQSASTHVQAA Trigger: AGCAGCTTGCACATGTGTGGAAGCTGACTGTGCGCAACTGCAGGCAGAAGTAGACCTAGCCATCTCTGCAGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS GCA 72 bp | CTGGAGTCTGCAGAGATGGCTAGGTCTACTTCTGCCTaGAGTTGCGCACAGTCAGCTTCCACACATGTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: LESAEMARSTSA*SCAQSASTHVQ Trigger: TTGCACATGTGTGGAAGCTGACTGTGCGCAACTGCAGGCAGAAGTAGACCTAGCCATCTCTGCAGACTCCAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS TCA 72 bp | CCAATTTCCAGAGGAAGCAGGGTGAAGGTCACCAAGTaGCTGGACGAGCCCTCTATCCTCTGGAACACACAT | + |
|
Preference number: 6 (lower is better) Translates to: PISRGSRVKVTK*LDEPSILWNTH Trigger: ATGTGTGTTCCAGAGGATAGAGGGCTCGTCCAGTCACTTGGTGACCTTCACCCTGCTTCCTCTGGAAATTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028233.7 ENSMUST00000156412.3 |
||
| CDS GCA 72 bp | TGTGCCATCAGAGTTACTGGGACCCCTCCTACCGCCTaGTCGAGTGAATCTTTAACCTGTGCCTTGATGGAA | + |
|
Preference number: 6 (lower is better) Translates to: CAIRVTGTPPTA*SSESLTCALME Trigger: TTCCATCAAGGCACAGGTTAAAGATTCACTCGAGCAGGCGGTAGGAGGGGTCCCAGTAACTCTGATGGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CAA 72 bp | GTGATATATCCATTACTGCATGGGAGGACCCGGATGTaGACTCCTCCTTGCTGGGCTTGTAGCTGGCACATG | + |
|
Preference number: 6 (lower is better) Translates to: VIYPLLHGRTRM*TPPCWACSWHM Trigger: CATGTGCCAGCTACAAGCCCAGCAAGGAGGAGTCAACATCCGGGTCCTCCCATGCAGTAATGGATATATCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CAA 90 bp | CCTCTTTGTTTCCAAGTCAGATGTCTCTTGATTCACATCGACTGTTaGTGCCATCAGAGTTACTGGGACCCCTCCTACCGCCTGCTCGAG | + |
|
Preference number: 6 (lower is better) Translates to: PLCFQVRCLLIHIDC*CHQSYWDPSYRLLE Trigger: CTCGAGCAGGCGGTAGGAGGGGTCCCAGTAACTCTGATGGCACAAACAGTCGATGTGAATCAAGAGACATCTGACTTGGAAACAAAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS GCA 72 bp | CAAGTCAGATGTCTCTTGATTCACATCGACTGTTTGTaGCATCAGAGTTACTGGGACCCCTCCTACCGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: QVRCLLIHIDCL*HQSYWDPSYRL Trigger: CAGGCGGTAGGAGGGGTCCCAGTAACTCTGATGGCACAAACAGTCGATGTGAATCAAGAGACATCTGACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS TCA 72 bp | TGGCTGGCTTCAAGTCGTCACCCAGAGAATAGACTCTaGTCTTTACTGACTGGTCCGGCGTGTAAACAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: WLASSRHPENRL*SLLTGPACKQV Trigger: AACCTGTTTACACGCCGGACCAGTCAGTAAAGATCAGAGTCTATTCTCTGGGTGACGACTTGAAGCCAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS TCA 72 bp | CAGAGTTACTGGGACCCCTCCTACCGCCTGCTCGAGTaGATCTTTAACCTGTGCCTTGATGGAAAATGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: QSYWDPSYRLLE*IFNLCLDGKWN Trigger: ATTCCATTTTCCATCAAGGCACAGGTTAAAGATTCACTCGAGCAGGCGGTAGGAGGGGTCCCAGTAACTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS TCA 72 bp | CTGCGTCAGCCACTAATTCTGCTGTTTGCTCCCCTGTaGCTATGTAATAGACCAGGAGTCGTGCTGAAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LRQPLILLFAPL*LCNRPGVVLKE Trigger: TTCCTTCAGCACGACTCCTGGTCTATTACATAGTCACAGGGGAGCAAACAGCAGAATTAGTGGCTGACGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CCA 72 bp | GGACACAGTTTGGCCTGGAGAATACACATATTCATCTaGAGACAGATGGACCTGGAGCTGGTTGCCACACTT | + |
|
Preference number: 6 (lower is better) Translates to: GHSLAWRIHIFI*RQMDLELVATL Trigger: AAGTGTGGCAACCAGCTCCAGGTCCATCTGTCTCCAGATGAATATGTGTATTCTCCAGGCCAAACTGTGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CCA 72 bp | GTTTACAGGCTTTCTCTTTTCTGGAGTCTGCAGAGATaGCTAGGTCTACTTCTGCCTGCAGTTGCGCACAGT | + |
|
Preference number: 6 (lower is better) Translates to: VYRLSLFWSLQR*LGLLLPAVAHS Trigger: ACTGTGCGCAACTGCAGGCAGAAGTAGACCTAGCCATCTCTGCAGACTCCAGAAAAGAGAAAGCCTGTAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CAA 72 bp | AGAGATCTGAGCAACTCCGTCAACCAACTTTGCGGCTaGTGTGGCTTTGTGCATCATCTGCTTCTCCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: RDLSNSVNQLCG*CGFVHHLLLLI Trigger: GATGAGGAGAAGCAGATGATGCACAAAGCCACACAAGCCGCAAAGTTGGTTGACGGAGTTGCTCAGATCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CAA 72 bp | CCTACCGCCTGCTCGAGTGAATCTTTAACCTGTGCCTaGATGGAAAATGGAATCCCGGGCTTCACGAAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: PTACSSESLTCA*MENGIPGFTKR Trigger: TCTTTTCGTGAAGCCCGGGATTCCATTTTCCATCAAGGCACAGGTTAAAGATTCACTCGAGCAGGCGGTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CAA 72 bp | TTCCAAGTCAGATGTCTCTTGATTCACATCGACTGTTaGTGCCATCAGAGTTACTGGGACCCCTCCTACCGC | + |
|
Preference number: 6 (lower is better) Translates to: FQVRCLLIHIDC*CHQSYWDPSYR Trigger: GCGGTAGGAGGGGTCCCAGTAACTCTGATGGCACAAACAGTCGATGTGAATCAAGAGACATCTGACTTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CAA 90 bp | GTAGTTGATCCACTCCTTCCACAAGAGCCCGTAAATCTTCCTCGTTaGCTCCGATTCCAGTCGGCAGTGATATATCCATTACTGCATGGG | + |
|
Preference number: 6 (lower is better) Translates to: VVDPLLPQEPVNLPR*LRFQSAVIYPLLHG Trigger: CCCATGCAGTAATGGATATATCACTGCCGACTGGAATCGGAGCAAACGAGGAAGATTTACGGGCTCTTGTGGAAGGAGTGGATCAACTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS TCA 72 bp | GACGAGTACGCAACTGCTTCGTACTCTTTGCTGGCTTaGTTTTCTTCGGGAAGTTCTGGGTCATCAGTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: DEYATASYSLLA*FSSGSSGSSVL Trigger: CAGAACTGATGACCCAGAACTTCCCGAAGAAAATCAAGCCAGCAAAGAGTACGAAGCAGTTGCGTACTCGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS TCA 72 bp | CTTGAATTTCCCAAGTCGTTAGTGAGTCAGGCAGCGTaGCCTGCAGCTGTTTTCTTTTGGGAACGCGATGAA | + |
|
Preference number: 6 (lower is better) Translates to: LEFPKSLVSQAA*PAAVFFWERDE Trigger: TTCATCGCGTTCCCAAAAGAAAACAGCTGCAGGTCACGCTGCCTGACTCACTAACGACTTGGGAAATTCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CCA 72 bp | TCAAGCAGGAAGGAGTCGGCTTTATCTAGCGCTGTGTaGATTTTCATGGTGGGGCATATGTCAACTGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SSRKESALSSAV*IFMVGHMSTAF Trigger: AAAGGCAGTTGACATATGCCCCACCATGAAAATCCACACAGCGCTAGATAAAGCCGACTCCTTCCTGCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CCA 72 bp | TGGGGTTGGCGTAATTCATATCCTTCAGTTTCAGGCTaGCGAGCAAAGCATAGGCTGTGGTTTCAACCATAC | + |
|
Preference number: 6 (lower is better) Translates to: WGWRNSYPSVSG*RAKHRLWFQPY Trigger: GTATGGTTGAAACCACAGCCTATGCTTTGCTCGCCAGCCTGAAACTGAAGGATATGAATTACGCCAACCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CAA 72 bp | GCAACTCCGTCAACCAACTTTGCGGCTTGTGTGGCTTaGTGCATCATCTGCTTCTCCTCATCTTTTATGTCC | + |
|
Preference number: 6 (lower is better) Translates to: ATPSTNFAACVA*CIICFSSSFMS Trigger: GGACATAAAAGATGAGGAGAAGCAGATGATGCACAAAGCCACACAAGCCGCAAAGTTGGTTGACGGAGTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CAA 72 bp | AGTTGGACAGGTTTATGGGGGCTTTCTTTTCGGATCTaGTTCGCAATAGTACAGCACTCGTTGAAGGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SWTGLWGLSFRI*FAIVQHSLKAL Trigger: CAGGGCCTTCAACGAGTGCTGTACTATTGCGAACAAGATCCGAAAAGAAAGCCCCCATAAACCTGTCCAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CAA 90 bp | TTGGCTGAGAGACGAGTACGCAACTGCTTCGTACTCTTTGCTGGCTaGATTTTCTTCGGGAAGTTCTGGGTCATCAGTTCTGATCTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LAERRVRNCFVLFAG*IFFGKFWVISSDLK Trigger: TTTGAGATCAGAACTGATGACCCAGAACTTCCCGAAGAAAATCAAGCCAGCAAAGAGTACGAAGCAGTTGCGTACTCGTCTCTCAGCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS TCA 72 bp | CAAGTCGTCACCCAGAGAATAGACTCTGATCTTTACTaGCTGGTCCGGCGTGTAAACAGGTTTGTCTGTATG | + |
|
Preference number: 6 (lower is better) Translates to: QVVTQRIDSDLY*LVRRVNRFVCM Trigger: CATACAGACAAACCTGTTTACACGCCGGACCAGTCAGTAAAGATCAGAGTCTATTCTCTGGGTGACGACTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS GCA 72 bp | ACTCCGTCAACCAACTTTGCGGCTTGTGTGGCTTTGTaGATCATCTGCTTCTCCTCATCTTTTATGTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: TPSTNFAACVAL*IICFSSSFMSS Trigger: AGAGGACATAAAAGATGAGGAGAAGCAGATGATGCACAAAGCCACACAAGCCGCAAAGTTGGTTGACGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CCA 72 bp | TCTGAGCAACTCCGTCAACCAACTTTGCGGCTTGTGTaGCTTTGTGCATCATCTGCTTCTCCTCATCTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: SEQLRQPTLRLV*LCASSASPHLL Trigger: TAAAAGATGAGGAGAAGCAGATGATGCACAAAGCCACACAAGCCGCAAAGTTGGTTGACGGAGTTGCTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CCA 72 bp | TGCTTCAGTCACCATGTCAAGGGACACAGTTTGGCCTaGAGAATACACATATTCATCTGGAGACAGATGGAC | + |
|
Preference number: 6 (lower is better) Translates to: CFSHHVKGHSLA*RIHIFIWRQMD Trigger: GTCCATCTGTCTCCAGATGAATATGTGTATTCTCCAGGCCAAACTGTGTCCCTTGACATGGTGACTGAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CCA 72 bp | GAGTCTGCTTCAGTCACCATGTCAAGGGACACAGTTTaGCCTGGAGAATACACATATTCATCTGGAGACAGA | + |
|
Preference number: 6 (lower is better) Translates to: ESASVTMSRDTV*PGEYTYSSGDR Trigger: TCTGTCTCCAGATGAATATGTGTATTCTCCAGGCCAAACTGTGTCCCTTGACATGGTGACTGAAGCAGACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CCA 72 bp | CTACAAATGCTTGACAGGATGGACACGTTGTGTCTGTaGGCCAATATTCAATCCAGGTGGAGGAATCTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LQMLDRMDTLCL*ANIQSRWRNLE Trigger: CTCTAGATTCCTCCACCTGGATTGAATATTGGCCCACAGACACAACGTGTCCATCCTGTCAAGCATTTGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028233.7 ENSMUST00000156412.3 |
||
| CDS CCA 72 bp | GTTTACAGGCTTTCTCTTTTCTGGAGTCTGCAGAGATaGCTAGGTCTACTTCTGCCACTACCCGTAATGTCT | + |
|
Preference number: 6 (lower is better) Translates to: VYRLSLFWSLQR*LGLLLPLPVMS Trigger: AGACATTACGGGTAGTGGCAGAAGTAGACCTAGCCATCTCTGCAGACTCCAGAAAAGAGAAAGCCTGTAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156412.3 |
||
| CDS CAA 72 bp | AGAACCGTGGACAAGAACTCCCCTACAAGCAGTCCTTaGACACTCAAAATCCTTTCAACTTTGGTCTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RTVDKNSPTSSP*TLKILSTLVLG Trigger: CCCCAAGACCAAAGTTGAAAGGATTTTGAGTGTCAAAGGACTGCTTGTAGGGGAGTTCTTGTCCACGGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CAA 90 bp | CTGTTTCAGAATCAAAAGAGATCTGAGCAACTCCGTCAACCAACTTaGCGGCTTGTGTGGCTTTGTGCATCATCTGCTTCTCCTCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: LFQNQKRSEQLRQPT*RLVWLCASSASPHL Trigger: AAGATGAGGAGAAGCAGATGATGCACAAAGCCACACAAGCCGCAAAGTTGGTTGACGGAGTTGCTCAGATCTCTTTTGATTCTGAAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS GCA 72 bp | ACCAACTTTGCGGCTTGTGTGGCTTTGTGCATCATCTaGTTCTCCTCATCTTTTATGTCCTCTCTCAATCCA | + |
|
Preference number: 6 (lower is better) Translates to: TNFAACVALCII*FSSSFMSSLNP Trigger: TGGATTGAGAGAGGACATAAAAGATGAGGAGAAGCAGATGATGCACAAAGCCACACAAGCCGCAAAGTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS GCA 72 bp | TTGATCTGCAGAACCTCTTTGCCCATGATTAAATACTaGTTCCCTTTCACCAGGTTGGCATTGGTACAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LICRTSLPMIKY*FPFTRLALVQL Trigger: GAGCTGTACCAATGCCAACCTGGTGAAAGGGAAGCAGTATTTAATCATGGGCAAAGAGGTTCTGCAGATCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028233.7 ENSMUST00000156412.3 |
||
| CDS CCA 72 bp | GAAGTTCACTCGGGCTCCGTCATAGCAGCATTTCTTTaGCACACTATGTTTGTACTTAGCAGCTTGTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: EVHSGSVIAAFL*HTMFVLSSLFF Trigger: GAAGAACAAGCTGCTAAGTACAAACATAGTGTGCCAAAGAAATGCTGCTATGACGGAGCCCGAGTGAACTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CCA 72 bp | GTCAGAAATGCTATAAATCATGGTGCACTGCTTATCTaGTCTGTGATACTCGTACACCGTGAAGGTAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: VRNAINHGALLI*SVILVHREGSR Trigger: CCTGCTACCTTCACGGTGTACGAGTATCACAGACCAGATAAGCAGTGCACCATGATTTATAGCATTTCTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CCA 72 bp | ATGTGCAAGCTGCTCCTTCACAGACTTTCTGAAGCCTaGTGTCAGAAATGCTATAAATCATGGTGCACTGCT | + |
|
Preference number: 6 (lower is better) Translates to: MCKLLLHRLSEA*CQKCYKSWCTA Trigger: AGCAGTGCACCATGATTTATAGCATTTCTGACACCAGGCTTCAGAAAGTCTGTGAAGGAGCAGCTTGCACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CAA 72 bp | AATCAAAAGAGATCTGAGCAACTCCGTCAACCAACTTaGCGGCTTGTGTGGCTTTGTGCATCATCTGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: NQKRSEQLRQPT*RLVWLCASSAS Trigger: AGAAGCAGATGATGCACAAAGCCACACAAGCCGCAAAGTTGGTTGACGGAGTTGCTCAGATCTCTTTTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CAA 72 bp | TCAAATTCTCTACAAATGCTTGACAGGATGGACACGTaGTGTCTGTGGGCCAATATTCAATCCAGGTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SNSLQMLDRMDT*CLWANIQSRWR Trigger: CCTCCACCTGGATTGAATATTGGCCCACAGACACAACGTGTCCATCCTGTCAAGCATTTGTAGAGAATTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028233.7 ENSMUST00000156412.3 |
||
| CDS CAA 90 bp | AGAATCAAAAGAGATCTGAGCAACTCCGTCAACCAACTTTGCGGCTaGTGTGGCTTTGTGCATCATCTGCTTCTCCTCATCTTTTATGTC | + |
|
Preference number: 6 (lower is better) Translates to: RIKRDLSNSVNQLCG*CGFVHHLLLLIFYV Trigger: GACATAAAAGATGAGGAGAAGCAGATGATGCACAAAGCCACACAAGCCGCAAAGTTGGTTGACGGAGTTGCTCAGATCTCTTTTGATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS TCA 72 bp | AGCTCTTTAACTGCTGTTTCAGAATCAAAAGAGATCTaGGCAACTCCGTCAACCAACTTTGCGGCTTGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SSLTAVSESKEI*ATPSTNFAACV Trigger: CACACAAGCCGCAAAGTTGGTTGACGGAGTTGCTCAGATCTCTTTTGATTCTGAAACAGCAGTTAAAGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS TCA 72 bp | AGTTTTCAGTCCAAGCGATGTAAATGTAACTTTGGCTaGGAGACGAGTACGCAACTGCTTCGTACTCTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SFQSKRCKCNFG*ETSTQLLRTLC Trigger: GCAAAGAGTACGAAGCAGTTGCGTACTCGTCTCTCAGCCAAAGTTACATTTACATCGCTTGGACTGAAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS TCA 72 bp | CTCCCCTGTGACTATGTAATAGACCAGGAGTCGTGCTaGAGGAACCATGTTCTGTGTCACTGGAATATTTAT | + |
|
Preference number: 6 (lower is better) Translates to: LPCDYVIDQESC*RNHVLCHWNIY Trigger: ATAAATATTCCAGTGACACAGAACATGGTTCCTTCAGCACGACTCCTGGTCTATTACATAGTCACAGGGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CCA 72 bp | CACTCTTTTCATCCAAAGCTTGAAAGACTCTTTGCATaGCCCTTTTGGCGTTTCCCTGGACTTTATACACAG | + |
|
Preference number: 6 (lower is better) Translates to: HSFHPKLERLFA*PFWRFPGLYTQ Trigger: CTGTGTATAAAGTCCAGGGAAACGCCAAAAGGGCCATGCAAAGAGTCTTTCAAGCTTTGGATGAAAAGAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CAA 72 bp | CTTGTAGTTTTCAGTCCAAGCGATGTAAATGTAACTTaGGCTGAGAGACGAGTACGCAACTGCTTCGTACTC | + |
|
Preference number: 6 (lower is better) Translates to: LVVFSPSDVNVT*AERRVRNCFVL Trigger: GAGTACGAAGCAGTTGCGTACTCGTCTCTCAGCCAAAGTTACATTTACATCGCTTGGACTGAAAACTACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CAA 72 bp | CAGGTCACTCTTTTCATCCAAAGCTTGAAAGACTCTTaGCATGGCCCTTTTGGCGTTTCCCTGGACTTTATA | + |
|
Preference number: 6 (lower is better) Translates to: QVTLFIQSLKDS*HGPFGVSLDFI Trigger: TATAAAGTCCAGGGAAACGCCAAAAGGGCCATGCAAAGAGTCTTTCAAGCTTTGGATGAAAAGAGTGACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS TCA 72 bp | CTTGATTTTCTTCGGGAAGTTCTGGGTCATCAGTTCTaGTCTCAAACTTTAGCACCGTCACATTTGATGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LDFLREVLGHQF*SQTLAPSHLMG Trigger: TCCCATCAAATGTGACGGTGCTAAAGTTTGAGATCAGAACTGATGACCCAGAACTTCCCGAAGAAAATCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CCA 72 bp | ATTATGCGCTTGAATCCAGAGTCACTGAGCCTGAAGTaGCTGGATGCTTCAATATCTTGGGTATCAATTTTC | + |
|
Preference number: 6 (lower is better) Translates to: IMRLNPESLSLK*LDASISWVSIF Trigger: GAAAATTGATACCCAAGATATTGAAGCATCCAGCCACTTCAGGCTCAGTGACTCTGGATTCAAGCGCATAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CAA 90 bp | TTTCCAGCTGACACTTCTCAACCAGCCATAGCAAAGAGTTACAAATaGAGTTTTCATCCTGTTTTACATACTTGGCCACCTGTCCAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: FPADTSQPAIAKSYK*SFHPVLHTWPPVQA Trigger: TGCTTGGACAGGTGGCCAAGTATGTAAAACAGGATGAAAACTCAATTTGTAACTCTTTGCTATGGCTGGTTGAGAAGTGTCAGCTGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CAA 90 bp | CAAAGTTATTCAAATTCTCTACAAATGCTTGACAGGATGGACACGTaGTGTCTGTGGGCCAATATTCAATCCAGGTGGAGGAATCTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: QSYSNSLQMLDRMDT*CLWANIQSRWRNLE Trigger: CTCTAGATTCCTCCACCTGGATTGAATATTGGCCCACAGACACAACGTGTCCATCCTGTCAAGCATTTGTAGAGAATTTGAATAACTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028233.7 ENSMUST00000156412.3 |
||
| CDS GCA 72 bp | TATCAGCAACACATATACCATTGTCTGAAATGCCAATaGCTTGAATTTCCCAAGTCGTTAGTGAGTCAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: YQQHIYHCLKCQ*LEFPKSLVSQA Trigger: TGCCTGACTCACTAACGACTTGGGAAATTCAAGGCATTGGCATTTCAGACAATGGTATATGTGTTGCTGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CAA 72 bp | AGTCCTTTGACACTCAAAATCCTTTCAACTTTGGTCTaGGGGACCAAATCTAATGGGATCCTGTATGGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: SPLTLKILSTLV*GTKSNGILYGN Trigger: ATTCCCATACAGGATCCCATTAGATTTGGTCCCCAAGACCAAAGTTGAAAGGATTTTGAGTGTCAAAGGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS CAA 72 bp | GTCTTCAGCAAAGTTATTCAAATTCTCTACAAATGCTaGACAGGATGGACACGTTGTGTCTGTGGGCCAATA | + |
|
Preference number: 6 (lower is better) Translates to: VFSKVIQILYKC*TGWTRCVCGPI Trigger: TATTGGCCCACAGACACAACGTGTCCATCCTGTCAAGCATTTGTAGAGAATTTGAATAACTTTGCTGAAGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS TCA 72 bp | TTTTCTGCCTTAGGAGATGCAGGTTTCTCTTTGACCTaGGAATTTCTTTACAAGAGTCATCACGATAATGGG | + |
|
Preference number: 6 (lower is better) Translates to: FSALGDAGFSLT*EFLYKSHHDNG Trigger: CCCATTATCGTGATGACTCTTGTAAAGAAATTCTCAGGTCAAAGAGAAACCTGCATCTCCTAAGGCAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
||
| CDS TCA 72 bp | TCTTCAGCAAAGTTATTCAAATTCTCTACAAATGCTTaGCAGGATGGACACGTTGTGTCTGTGGGCCAATAT | + |
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Preference number: 6 (lower is better) Translates to: SSAKLFKFSTNA*QDGHVVSVGQY Trigger: ATATTGGCCCACAGACACAACGTGTCCATCCTGTCAAGCATTTGTAGAGAATTTGAATAACTTTGCTGAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028233.7 ENSMUST00000156412.3 |
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| CDS GCA 72 bp | CTATGTTTGTACTTAGCAGCTTGTTCTTCTATTTTCTaGCTTAGGAGATGCAGGTTTCTCTTTGACCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: LCLYLAACSSIF*LRRCRFLFDLR Trigger: TCTCAGGTCAAAGAGAAACCTGCATCTCCTAAGGCAGAAAATAGAAGAACAAGCTGCTAAGTACAAACATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS GCA 72 bp | CTTGAATCCAGAGTCACTGAGCCTGAAGTGGCTGGATaGTTCAATATCTTGGGTATCAATTTTCAAGTAAAA | + |
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Preference number: 6 (lower is better) Translates to: LESRVTEPEVAG*FNILGINFQVK Trigger: TTTTACTTGAAAATTGATACCCAAGATATTGAAGCATCCAGCCACTTCAGGCTCAGTGACTCTGGATTCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS CAA 72 bp | GACACTTCTCAACCAGCCATAGCAAAGAGTTACAAATaGAGTTTTCATCCTGTTTTACATACTTGGCCACCT | + |
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Preference number: 6 (lower is better) Translates to: DTSQPAIAKSYK*SFHPVLHTWPP Trigger: AGGTGGCCAAGTATGTAAAACAGGATGAAAACTCAATTTGTAACTCTTTGCTATGGCTGGTTGAGAAGTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028233.7 |
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| CDS CAA 72 bp | TTGAAACTGAAATTGTGTTTGATCTGCAGAACCTCTTaGCCCATGATTAAATACTGCTTCCCTTTCACCAGG | + |
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Preference number: 6 (lower is better) Translates to: LKLKLCLICRTS*PMIKYCFPFTR Trigger: CCTGGTGAAAGGGAAGCAGTATTTAATCATGGGCAAAGAGGTTCTGCAGATCAAACACAATTTCAGTTTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028233.7 ENSMUST00000156412.3 |
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| CDS CAA 90 bp | GTGGAGGAATCTAGAGGGTATATATACTTGAAACTGAAATTGTGTTaGATCTGCAGAACCTCTTTGCCCATGATTAAATACTGCTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: VEESRGYIYLKLKLC*ICRTSLPMIKYCFP Trigger: AGGGAAGCAGTATTTAATCATGGGCAAAGAGGTTCTGCAGATCAAACACAATTTCAGTTTCAAGTATATATACCCTCTAGATTCCTCCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028233.7 ENSMUST00000156412.3 |
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| CDS CAA 90 bp | ATCCAGGTGGAGGAATCTAGAGGGTATATATACTTGAAACTGAAATaGTGTTTGATCTGCAGAACCTCTTTGCCCATGATTAAATACTGC | + |
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Preference number: 6 (lower is better) Translates to: IQVEESRGYIYLKLK*CLICRTSLPMIKYC Trigger: GCAGTATTTAATCATGGGCAAAGAGGTTCTGCAGATCAAACACAATTTCAGTTTCAAGTATATATACCCTCTAGATTCCTCCACCTGGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028233.7 ENSMUST00000156412.3 |
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| CDS CCA 72 bp | AAAGTTATTCAAATTCTCTACAAATGCTTGACAGGATaGACACGTTGTGTCTGTGGGCCAATATTCAATCCA | + |
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Preference number: 6 (lower is better) Translates to: KVIQILYKCLTG*TRCVCGPIFNP Trigger: TGGATTGAATATTGGCCCACAGACACAACGTGTCCATCCTGTCAAGCATTTGTAGAGAATTTGAATAACTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028233.7 ENSMUST00000156412.3 |
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| CDS CAA 72 bp | TCAATCCAGGTGGAGGAATCTAGAGGGTATATATACTaGAAACTGAAATTGTGTTTGATCTGCAGAACCTCT | + |
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Preference number: 6 (lower is better) Translates to: SIQVEESRGYIY*KLKLCLICRTS Trigger: AGAGGTTCTGCAGATCAAACACAATTTCAGTTTCAAGTATATATACCCTCTAGATTCCTCCACCTGGATTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028233.7 ENSMUST00000156412.3 |
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| CDS CAA 90 bp | TATATATACTTGAAACTGAAATTGTGTTTGATCTGCAGAACCTCTTaGCCCATGATTAAATACTGCTTCCCTTTCACCAGGTTGGCATTG | + |
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Preference number: 6 (lower is better) Translates to: YIYLKLKLCLICRTS*PMIKYCFPFTRLAL Trigger: CAATGCCAACCTGGTGAAAGGGAAGCAGTATTTAATCATGGGCAAAGAGGTTCTGCAGATCAAACACAATTTCAGTTTCAAGTATATATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028233.7 ENSMUST00000156412.3 |
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| CDS CAA 72 bp | GAGGAATCTAGAGGGTATATATACTTGAAACTGAAATaGTGTTTGATCTGCAGAACCTCTTTGCCCATGATT | + |
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Preference number: 6 (lower is better) Translates to: EESRGYIYLKLK*CLICRTSLPMI Trigger: AATCATGGGCAAAGAGGTTCTGCAGATCAAACACAATTTCAGTTTCAAGTATATATACCCTCTAGATTCCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028233.7 ENSMUST00000156412.3 |
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