Pregenerated sensors for HBS1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019977Ensembl transcript IDs: ENSMUST00000020153.10, ENSMUST00000061324.6, ENSMUST00000092674.14, ENSMUST00000218714.2, ENSMUST00000219915.2
Found 195 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTGCCACCCCGAAAGGGAAGAAATGGCAGTTCAGTGCTGGCCTCTaGCAGCTGGCAACTGGGAAGTTTTGCAGAGTAATCCTTAATACT | + |
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Preference number: 1 (lower is better) Translates to: TATPKGKKWQFSAGL*QLATGKFCRVILNT Trigger: AGTATTAAGGATTACTCTGCAAAACTTCCCAGTTGCCAGCTGCCAGAGGCCAGCACTGAACTGCCATTTCTTCCCTTTCGGGGTGGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| 3UTR CCA 90 bp | CATATTTACTGCCACCCCGAAAGGGAAGAAATGGCAGTTCAGTGCTaGCCTCTGGCAGCTGGCAACTGGGAAGTTTTGCAGAGTAATCCT | + |
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Preference number: 1 (lower is better) Translates to: HIYCHPEREEMAVQC*PLAAGNWEVLQSNP Trigger: AGGATTACTCTGCAAAACTTCCCAGTTGCCAGCTGCCAGAGGCCAGCACTGAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTAAATATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| 3UTR CCA 90 bp | CTCAGCACAACAAACATATTTACTGCCACCCCGAAAGGGAAGAAATaGCAGTTCAGTGCTGGCCTCTGGCAGCTGGCAACTGGGAAGTTT | + |
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Preference number: 1 (lower is better) Translates to: LSTTNIFTATPKGKK*QFSAGLWQLATGKF Trigger: AAACTTCCCAGTTGCCAGCTGCCAGAGGCCAGCACTGAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTAAATATGTTTGTTGTGCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| 3UTR GCA 90 bp | AAACATATTTACTGCCACCCCGAAAGGGAAGAAATGGCAGTTCAGTaGTGGCCTCTGGCAGCTGGCAACTGGGAAGTTTTGCAGAGTAAT | + |
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Preference number: 1 (lower is better) Translates to: KHIYCHPEREEMAVQ*WPLAAGNWEVLQSN Trigger: ATTACTCTGCAAAACTTCCCAGTTGCCAGCTGCCAGAGGCCAGCACTGAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTAAATATGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| 3UTR TCA 90 bp | AACAGAACAGCGTTTGGATTTGGTTTGGCTGGAAGTCGAGTCCACTaGGTTAAGTGTCTTGTGATACCTCCCACAAGTCTCAGCACAACA | + |
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Preference number: 1 (lower is better) Translates to: NRTAFGFGLAGSRVH*VKCLVIPPTSLSTT Trigger: TGTTGTGCTGAGACTTGTGGGAGGTATCACAAGACACTTAACTCAGTGGACTCGACTTCCAGCCAAACCAAATCCAAACGCTGTTCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| 3UTR TCA 90 bp | GATTTGGTTTGGCTGGAAGTCGAGTCCACTGAGTTAAGTGTCTTGTaGTACCTCCCACAAGTCTCAGCACAACAAACATATTTACTGCCA | + |
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Preference number: 1 (lower is better) Translates to: DLVWLEVESTELSVL*YLPQVSAQQTYLLP Trigger: TGGCAGTAAATATGTTTGTTGTGCTGAGACTTGTGGGAGGTATCACAAGACACTTAACTCAGTGGACTCGACTTCCAGCCAAACCAAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| 3UTR-3UTR GCA 90 bp | GACTCTCCAAGCCCCACTAAGGTTCAAGGCTTCCTTAGAACACACACAGCAGGAGAAATGGCAGTTCAGTaGTGGCCTCTGGCAGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: DSPSPTKVQGFLRTHTAGEMAVQ*WPLAAG Trigger: GCCAGCTGCCAGAGGCCAGCACTGAACTGCCATTTC...TCCTGCTGTGTGTGTTCTAAGGAAGCCTTGAACCTTAGTGGGGCTTGGAGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| 3UTR-3UTR CCA 90 bp | GACTCTCCAAGCCCCACTAAGGTTCAAGGCTTCCTTAGAACACACACAGCAGGATTCAGTGCTGGCCTCTaGCAGCTGGCAACTGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: DSPSPTKVQGFLRTHTAGFSAGL*QLATGK Trigger: CTTCCCAGTTGCCAGCTGCCAGAGGCCAGCACTGAA...TCCTGCTGTGTGTGTTCTAAGGAAGCCTTGAACCTTAGTGGGGCTTGGAGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| 3UTR-3UTR CCA 90 bp | GACTCTCCAAGCCCCACTAAGGTTCAAGGCTTCCTTAGAACACACACAGCAGGACTGGCCTCTGGCAGCTaGCAACTGGGAAGTTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: DSPSPTKVQGFLRTHTAGLASGS*QLGSFA Trigger: TGCAAAACTTCCCAGTTGCCAGCTGCCAGAGGCCAG...TCCTGCTGTGTGTGTTCTAAGGAAGCCTTGAACCTTAGTGGGGCTTGGAGAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCACAACAAACATATTTACTGCCACCCCGAAAGGGAAGAAATGGCAGTTCAGCTGGCCTCTGGCAGCTaGCAACTGGGAAGTTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: QHNKHIYCHPEREEMAVQLASGS*QLGSFA Trigger: TGCAAAACTTCCCAGTTGCCAGCTGCCAGAGGCCAG...CTGAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTAAATATGTTTGTTGTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAAGGCTTCCTTAGAACACACACAGCAGGAGAATGGAAACAGAACAGCGTTTATGGCAGTTCAGTGCTaGCCTCTGGCAGCTGGCAAC | + |
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Preference number: 2 (lower is better) Translates to: FKASLEHTQQENGNRTAFMAVQC*PLAAGN Trigger: GTTGCCAGCTGCCAGAGGCCAGCACTGAACTGCCAT...AAACGCTGTTCTGTTTCCATTCTCCTGCTGTGTGTGTTCTAAGGAAGCCTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAAGGCTTCCTTAGAACACACACAGCAGGAGAATGGAAACAGAACAGCGTTTCCGAAAGGGAAGAAATaGCAGTTCAGTGCTGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: FKASLEHTQQENGNRTAFPKGKK*QFSAGL Trigger: GAGGCCAGCACTGAACTGCCATTTCTTCCCTTTCGG...AAACGCTGTTCTGTTTCCATTCTCCTGCTGTGTGTGTTCTAAGGAAGCCTTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGCTTTCCTAGCAAGGGAGGCTCTTTTGGGTTTCATACTATCCTTAGTAGAATGGTGTTACAGCAACTaGTGGGTCAACTACAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: GAFLAREALLGFILSLVEWCYSN*WVNYRL Trigger: AAGCCTGTAGTTGACCCATCAGTTGCTGTAACACCA...TTCTACTAAGGATAGTATGAAACCCAAAAGAGCCTCCCTTGCTAGGAAAGCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061324.6 |
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| 3UTR-3UTR GCA 90 bp | CAGCACAACAAACATATTTACTGCCACCCCGAAAGGGAAGAAATGGCAGTTCAGACAATCATGACTGCATaGTGTTTCCTTAGCTGCACC | + |
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Preference number: 2 (lower is better) Translates to: QHNKHIYCHPEREEMAVQTIMTA*CFLSCT Trigger: GGTGCAGCTAAGGAAACAGCATGCAGTCATGATTGT...CTGAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTAAATATGTTTGTTGTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| 3UTR-3UTR GCA 90 bp | TTTGAACTCAGAACTTTAGTGTCTGGTGTTACAGCAACTGATGGGTCAACTACAAGCACTGGCCAGAGCTaGTTCCTCTGTGTTCCTCAA | + |
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Preference number: 2 (lower is better) Translates to: FELRTLVSGVTATDGSTTSTGQS*FLCVPQ Trigger: TTGAGGAACACAGAGGAAGCAGCTCTGGCCAGTGCT...TGTAGTTGACCCATCAGTTGCTGTAACACCAGACACTAAAGTTCTGAGTTCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061324.6 |
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| 3UTR-3UTR CCA 90 bp | GTAGCATCTTTGTTACTTAAGAACAGATTTCTGTCACTTCGCATTACACTCCAGTGGATTTGGTTTGGCTaGAAGTCGAGTCCACTGAGT | + |
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Preference number: 2 (lower is better) Translates to: VASLLLKNRFLSLRITLQWIWFG*KSSPLS Trigger: ACTCAGTGGACTCGACTTCCAGCCAAACCAAATCCA...CTGGAGTGTAATGCGAAGTGACAGAAATCTGTTCTTAAGTAACAAAGATGCTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGAAAGTTGGATATCAAATGAAGTATCTGAGGTCCAAGTCACAATATCATGTGAAGGGAACCCAAGCTaGCAGGTGACTGGTTACACA | + |
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Preference number: 2 (lower is better) Translates to: SESWISNEVSEVQVTISCEGNPS*QVTGYT Trigger: TGTGTAACCAGTCACCTGCCAGCTTGGGTTCCCTTC...ACATGATATTGTGACTTGGACCTCAGATACTTCATTTGATATCCAACTTTCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061324.6 |
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| 3UTR-3UTR GCA 90 bp | GTAGCATCTTTGTTACTTAAGAACAGATTTCTGTCACTTCGCATTACACTCCAGACAATCATGACTGCATaGTGTTTCCTTAGCTGCACC | + |
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Preference number: 2 (lower is better) Translates to: VASLLLKNRFLSLRITLQTIMTA*CFLSCT Trigger: GGTGCAGCTAAGGAAACAGCATGCAGTCATGATTGT...CTGGAGTGTAATGCGAAGTGACAGAAATCTGTTCTTAAGTAACAAAGATGCTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGCTTTCCTAGCAAGGGAGGCTCTTTTGGGTTTCATACTATCCTTAGTAGAACTTTGGGACAAACTCTaGAGTTTTTATCAAGACACT | + |
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Preference number: 2 (lower is better) Translates to: GAFLAREALLGFILSLVELWDKL*SFYQDT Trigger: AGTGTCTTGATAAAAACTCCAGAGTTTGTCCCAAAG...TTCTACTAAGGATAGTATGAAACCCAAAAGAGCCTCCCTTGCTAGGAAAGCTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061324.6 |
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| 3UTR-3UTR TCA 90 bp | TTTGAACTCAGAACTTTAGTGTCTGGTGTTACAGCAACTGATGGGTCAACTACAACTAAGATCAATATTTaGATCAACTTCAGGGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: FELRTLVSGVTATDGSTTTKINI*INFRAP Trigger: AGGAGCCCTGAAGTTGATTCAAATATTGATCTTAGT...TGTAGTTGACCCATCAGTTGCTGTAACACCAGACACTAAAGTTCTGAGTTCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061324.6 |
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| 3UTR CCA 72 bp | TGCCACCCCGAAAGGGAAGAAATGGCAGTTCAGTGCTaGCCTCTGGCAGCTGGCAACTGGGAAGTTTTGCAG | + |
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Preference number: 3 (lower is better) Translates to: CHPEREEMAVQC*PLAAGNWEVLQ Trigger: CTGCAAAACTTCCCAGTTGCCAGCTGCCAGAGGCCAGCACTGAACTGCCATTTCTTCCCTTTCGGGGTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| 3UTR GCA 72 bp | TACTGCCACCCCGAAAGGGAAGAAATGGCAGTTCAGTaGTGGCCTCTGGCAGCTGGCAACTGGGAAGTTTTG | + |
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Preference number: 3 (lower is better) Translates to: YCHPEREEMAVQ*WPLAAGNWEVL Trigger: CAAAACTTCCCAGTTGCCAGCTGCCAGAGGCCAGCACTGAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| 3UTR CCA 72 bp | CCGAAAGGGAAGAAATGGCAGTTCAGTGCTGGCCTCTaGCAGCTGGCAACTGGGAAGTTTTGCAGAGTAATC | + |
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Preference number: 3 (lower is better) Translates to: PKGKKWQFSAGL*QLATGKFCRVI Trigger: GATTACTCTGCAAAACTTCCCAGTTGCCAGCTGCCAGAGGCCAGCACTGAACTGCCATTTCTTCCCTTTCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| 3UTR CCA 72 bp | ACAAACATATTTACTGCCACCCCGAAAGGGAAGAAATaGCAGTTCAGTGCTGGCCTCTGGCAGCTGGCAACT | + |
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Preference number: 3 (lower is better) Translates to: TNIFTATPKGKK*QFSAGLWQLAT Trigger: AGTTGCCAGCTGCCAGAGGCCAGCACTGAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTAAATATGTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| 3UTR-3UTR CAA 90 bp | GGAGCTTTCCTAGCAAGGGAGGCTCTTTTGGGTTTCATACTATCCTTAGTAGAACAGACTGCGAGCGGTTaGCCAGTTGTGACAGGGGAA | + |
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Preference number: 3 (lower is better) Translates to: GAFLAREALLGFILSLVEQTASG*PVVTGE Trigger: TTCCCCTGTCACAACTGGCAAACCGCTCGCAGTCTG...TTCTACTAAGGATAGTATGAAACCCAAAAGAGCCTCCCTTGCTAGGAAAGCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061324.6 |
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| 3UTR TCA 72 bp | GCGTTTGGATTTGGTTTGGCTGGAAGTCGAGTCCACTaGGTTAAGTGTCTTGTGATACCTCCCACAAGTCTC | + |
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Preference number: 3 (lower is better) Translates to: AFGFGLAGSRVH*VKCLVIPPTSL Trigger: GAGACTTGTGGGAGGTATCACAAGACACTTAACTCAGTGGACTCGACTTCCAGCCAAACCAAATCCAAACGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| 3UTR GCA 72 bp | AGTGCTGGCCTCTGGCAGCTGGCAACTGGGAAGTTTTaGAGAGTAATCCTTAATACTTGTTGGCAGCTAACT | + |
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Preference number: 3 (lower is better) Translates to: SAGLWQLATGKF*RVILNTCWQLT Trigger: AGTTAGCTGCCAACAAGTATTAAGGATTACTCTGCAAAACTTCCCAGTTGCCAGCTGCCAGAGGCCAGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| 3UTR GCA 72 bp | ACCTCCCACAAGTCTCAGCACAACAAACATATTTACTaGCACCCCGAAAGGGAAGAAATGGCAGTTCAGTGC | + |
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Preference number: 3 (lower is better) Translates to: TSHKSQHNKHIY*HPEREEMAVQC Trigger: GCACTGAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTAAATATGTTTGTTGTGCTGAGACTTGTGGGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| 3UTR CCA 72 bp | ACACACACAGCAGGAGAATGGAAACAGAACAGCGTTTaGATTTGGTTTGGCTGGAAGTCGAGTCCACTGAGT | + |
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Preference number: 3 (lower is better) Translates to: THTAGEWKQNSV*IWFGWKSSPLS Trigger: ACTCAGTGGACTCGACTTCCAGCCAAACCAAATCCAAACGCTGTTCTGTTTCCATTCTCCTGCTGTGTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| 3UTR-3UTR CAA 90 bp | TCAGAAAGTTGGATATCAAATGAAGTATCTGAGGTCCAAGTCACAATATCATGTCTAGTTCAATCGTTTTaGCAATCAAATCAGAAAGGG | + |
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Preference number: 3 (lower is better) Translates to: SESWISNEVSEVQVTISCLVQSF*QSNQKG Trigger: CCCTTTCTGATTTGATTGCAAAAACGATTGAACTAG...ACATGATATTGTGACTTGGACCTCAGATACTTCATTTGATATCCAACTTTCTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061324.6 |
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| CDS-3UTR GCA 90 bp | GACTCTCCAAGCCCCACTAAGGTTCAAGGCTTCCTTAGAACACACACAGCAGGATACGTGATCGCCTGCTaGTGCCCAATCGACAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: DSPSPTKVQGFLRTHTAGYVIAC*CPIDRL Trigger: GAGCCTGTCGATTGGGCAGCAGCAGGCGATCACGTA...TCCTGCTGTGTGTGTTCTAAGGAAGCCTTGAACCTTAGTGGGGCTTGGAGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| CDS-3UTR TCA 90 bp | GACTCTCCAAGCCCCACTAAGGTTCAAGGCTTCCTTAGAACACACACAGCAGGAGGAGCCCAGCTCTTCTaGTGTTTGAAGGGAAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: DSPSPTKVQGFLRTHTAGGAQLF*CLKGRR Trigger: CCTCCTTCCCTTCAAACATCAGAAGAGCTGGGCTCC...TCCTGCTGTGTGTGTTCTAAGGAAGCCTTGAACCTTAGTGGGGCTTGGAGAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| CDS-3UTR CCA 90 bp | GCTGGCCTCTGGCAGCTGGCAACTGGGAAGTTTTGCAGAGTAATCCTTAATACTACAGCGACATCGGCCTaGGCTGCTCCTGTGATCATG | + |
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Preference number: 4 (lower is better) Translates to: AGLWQLATGKFCRVILNTTATSA*AAPVIM Trigger: CATGATCACAGGAGCAGCCCAGGCCGATGTCGCTGT...AGTATTAAGGATTACTCTGCAAAACTTCCCAGTTGCCAGCTGCCAGAGGCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| CDS-3UTR GCA 90 bp | GACTCTCCAAGCCCCACTAAGGTTCAAGGCTTCCTTAGAACACACACAGCAGGAGCTTTCACGTCTATCTaGTGCCTCAGCTTGCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: DSPSPTKVQGFLRTHTAGAFTSI*CLSLPD Trigger: GTCTGGCAAGCTGAGGCAGCAGATAGACGTGAAAGC...TCCTGCTGTGTGTGTTCTAAGGAAGCCTTGAACCTTAGTGGGGCTTGGAGAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| CDS-3UTR GCA 90 bp | GCTGGCCTCTGGCAGCTGGCAACTGGGAAGTTTTGCAGAGTAATCCTTAATACTACTAAGTTGAGGAGCTaGTTCCCGCCCTGCCGCTTT | + |
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Preference number: 4 (lower is better) Translates to: AGLWQLATGKFCRVILNTTKLRS*FPPCRF Trigger: AAAGCGGCAGGGCGGGAAGCAGCTCCTCAACTTAGT...AGTATTAAGGATTACTCTGCAAAACTTCCCAGTTGCCAGCTGCCAGAGGCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| CDS-3UTR GCA 90 bp | GAATGGAAACAGAACAGCGTTTGGATTTGGTTTGGCTGGAAGTCGAGTCCACTGGTGATCGCCTGCTGCTaGCCAATCGACAGGCTCATC | + |
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Preference number: 4 (lower is better) Translates to: EWKQNSVWIWFGWKSSPLVIACC*PIDRLI Trigger: GATGAGCCTGTCGATTGGGCAGCAGCAGGCGATCAC...CAGTGGACTCGACTTCCAGCCAAACCAAATCCAAACGCTGTTCTGTTTCCATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| CDS-3UTR CCA 90 bp | GACTCTCCAAGCCCCACTAAGGTTCAAGGCTTCCTTAGAACACACACAGCAGGATGGGAGGGCAGATTTTaGAGTGCCGGTCTCAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: DSPSPTKVQGFLRTHTAGWEGRF*SAGLRN Trigger: ATTCCTGAGACCGGCACTCCAAAATCTGCCCTCCCA...TCCTGCTGTGTGTGTTCTAAGGAAGCCTTGAACCTTAGTGGGGCTTGGAGAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| CDS-3UTR TCA 90 bp | TGGAAACAGAACAGCGTTTGGATTTGGTTTGGCTGGAAGTCGAGTCCACTGAGTAGGGTTGTCACGGCGTaGGTAAATGAACTGAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: WKQNSVWIWFGWKSSPLSRVVTA*VNELSG Trigger: GCCGCTCAGTTCATTTACTCACGCCGTGACAACCCT...ACTCAGTGGACTCGACTTCCAGCCAAACCAAATCCAAACGCTGTTCTGTTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| CDS-3UTR TCA 90 bp | GAATGGAAACAGAACAGCGTTTGGATTTGGTTTGGCTGGAAGTCGAGTCCACTGAGCGCTGAGGGGGCTTaGAGGAATCAATCTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: EWKQNSVWIWFGWKSSPLSAEGA*RNQSAP Trigger: TGGAGCAGATTGATTCCTTCAAGCCCCCTCAGCGCT...CAGTGGACTCGACTTCCAGCCAAACCAAATCCAAACGCTGTTCTGTTTCCATTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| CDS-3UTR GCA 90 bp | TGGAAACAGAACAGCGTTTGGATTTGGTTTGGCTGGAAGTCGAGTCCACTGAGTACTAAGTTGAGGAGCTaGTTCCCGCCCTGCCGCTTT | + |
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Preference number: 4 (lower is better) Translates to: WKQNSVWIWFGWKSSPLSTKLRS*FPPCRF Trigger: AAAGCGGCAGGGCGGGAAGCAGCTCCTCAACTTAGT...ACTCAGTGGACTCGACTTCCAGCCAAACCAAATCCAAACGCTGTTCTGTTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| CDS-3UTR GCA 90 bp | GACTCTCCAAGCCCCACTAAGGTTCAAGGCTTCCTTAGAACACACACAGCAGGACTTCAAACTCTCCTCTaGTGGCATCAACGACCAGGA | + |
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Preference number: 4 (lower is better) Translates to: DSPSPTKVQGFLRTHTAGLQTLL*WHQRPG Trigger: TCCTGGTCGTTGATGCCAGCAGAGGAGAGTTTGAAG...TCCTGCTGTGTGTGTTCTAAGGAAGCCTTGAACCTTAGTGGGGCTTGGAGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| CDS-3UTR GCA 90 bp | GCACAACAAACATATTTACTGCCACCCCGAAAGGGAAGAAATGGCAGTTCAGTGGTGATCGCCTGCTGCTaGCCAATCGACAGGCTCATC | + |
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Preference number: 4 (lower is better) Translates to: AQQTYLLPPRKGRNGSSVVIACC*PIDRLI Trigger: GATGAGCCTGTCGATTGGGCAGCAGCAGGCGATCAC...CACTGAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTAAATATGTTTGTTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| CDS-3UTR CCA 90 bp | GCACAACAAACATATTTACTGCCACCCCGAAAGGGAAGAAATGGCAGTTCAGTGACAGCGACATCGGCCTaGGCTGCTCCTGTGATCATG | + |
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Preference number: 4 (lower is better) Translates to: AQQTYLLPPRKGRNGSSVTATSA*AAPVIM Trigger: CATGATCACAGGAGCAGCCCAGGCCGATGTCGCTGT...CACTGAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTAAATATGTTTGTTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| CDS-3UTR TCA 90 bp | GACTCTCCAAGCCCCACTAAGGTTCAAGGCTTCCTTAGAACACACACAGCAGGACCACGCATATGCAAATaGAGCCTTGCCAGCCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: DSPSPTKVQGFLRTHTAGPRICK*SLASLF Trigger: AAAAAGGCTGGCAAGGCTTCATTTGCATATGCGTGG...TCCTGCTGTGTGTGTTCTAAGGAAGCCTTGAACCTTAGTGGGGCTTGGAGAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| CDS-3UTR TCA 90 bp | CTCTGGCAGCTGGCAACTGGGAAGTTTTGCAGAGTAATCCTTAATACTTGTTGGAGCGCTGAGGGGGCTTaGAGGAATCAATCTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LWQLATGKFCRVILNTCWSAEGA*RNQSAP Trigger: TGGAGCAGATTGATTCCTTCAAGCCCCCTCAGCGCT...CCAACAAGTATTAAGGATTACTCTGCAAAACTTCCCAGTTGCCAGCTGCCAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR GCA 90 bp | TGGAAACAGAACAGCGTTTGGATTTGGTTTGGCTGGAAGTCGAGTCCACTGAGTTCTGCTGCCTCAGCTTaGCAGACTTTCTCACTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: WKQNSVWIWFGWKSSPLSSAASA*QTFSLV Trigger: CACCAGTGAGAAAGTCTGGCAAGCTGAGGCAGCAGA...ACTCAGTGGACTCGACTTCCAGCCAAACCAAATCCAAACGCTGTTCTGTTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR GCA 90 bp | GAATGGAAACAGAACAGCGTTTGGATTTGGTTTGGCTGGAAGTCGAGTCCACTGGCTTTCACGTCTATCTaGTGCCTCAGCTTGCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: EWKQNSVWIWFGWKSSPLAFTSI*CLSLPD Trigger: GTCTGGCAAGCTGAGGCAGCAGATAGACGTGAAAGC...CAGTGGACTCGACTTCCAGCCAAACCAAATCCAAACGCTGTTCTGTTTCCATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR GCA 90 bp | TTCAAGGCTTCCTTAGAACACACACAGCAGGAGAATGGAAACAGAACAGCGTTTAGCTGCTTCCCGCCCTaGCGCTTTTCCAATTCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: FKASLEHTQQENGNRTAFSCFPP*RFSNSA Trigger: AGCGGAATTGGAAAAGCGGCAGGGCGGGAAGCAGCT...AAACGCTGTTCTGTTTCCATTCTCCTGCTGTGTGTGTTCTAAGGAAGCCTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR GCA 90 bp | AGTGTCTCTCATCTAACAATCATGACTGCATGCTGTTTCCTTAGCTGCACCACTAGCTGCTTCCCGCCCTaGCGCTTTTCCAATTCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVSHLTIMTACCFLSCTTSCFPP*RFSNSA Trigger: AGCGGAATTGGAAAAGCGGCAGGGCGGGAAGCAGCT...AGTGGTGCAGCTAAGGAAACAGCATGCAGTCATGATTGTTAGATGAGAGACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR GCA 90 bp | CTCAGCACAACAAACATATTTACTGCCACCCCGAAAGGGAAGAAATGGCAGTTCGACATCGGCCTGGGCTaGTCCTGTGATCATGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSTTNIFTATPKGKKWQFDIGLG*SCDHVW Trigger: CCAAACATGATCACAGGAGCAGCCCAGGCCGATGTC...GAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTAAATATGTTTGTTGTGCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR GCA 90 bp | AGTGTCTCTCATCTAACAATCATGACTGCATGCTGTTTCCTTAGCTGCACCACTTACGTGATCGCCTGCTaGTGCCCAATCGACAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SVSHLTIMTACCFLSCTTYVIAC*CPIDRL Trigger: GAGCCTGTCGATTGGGCAGCAGCAGGCGATCACGTA...AGTGGTGCAGCTAAGGAAACAGCATGCAGTCATGATTGTTAGATGAGAGACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR CCA 90 bp | CTCAGCACAACAAACATATTTACTGCCACCCCGAAAGGGAAGAAATGGCAGTTCTCACTGGTGTCGGAGTaGAGCCCAGCTCTTCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LSTTNIFTATPKGKKWQFSLVSE*SPALLM Trigger: CATCAGAAGAGCTGGGCTCCACTCCGACACCAGTGA...GAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTAAATATGTTTGTTGTGCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR TCA 90 bp | AGTGTCTCTCATCTAACAATCATGACTGCATGCTGTTTCCTTAGCTGCACCACTAGGGTTGTCACGGCGTaGGTAAATGAACTGAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SVSHLTIMTACCFLSCTTRVVTA*VNELSG Trigger: GCCGCTCAGTTCATTTACTCACGCCGTGACAACCCT...AGTGGTGCAGCTAAGGAAACAGCATGCAGTCATGATTGTTAGATGAGAGACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR TCA 90 bp | GCTGGCCTCTGGCAGCTGGCAACTGGGAAGTTTTGCAGAGTAATCCTTAATACTCCGAGATATAACTTTTaGAGGCTGTCCTGCACACAC | + |
|
Preference number: 4 (lower is better) Translates to: AGLWQLATGKFCRVILNTPRYNF*RLSCTH Trigger: GTGTGTGCAGGACAGCCTTCAAAAGTTATATCTCGG...AGTATTAAGGATTACTCTGCAAAACTTCCCAGTTGCCAGCTGCCAGAGGCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020153.10 |
||
| CDS-3UTR TCA 90 bp | CTCAGCACAACAAACATATTTACTGCCACCCCGAAAGGGAAGAAATGGCAGTTCAGCTCTTCTGATGTTTaGAGGGAAGGAGGTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSTTNIFTATPKGKKWQFSSSDV*REGGGR Trigger: CCTCCCACCTCCTTCCCTTCAAACATCAGAAGAGCT...GAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTAAATATGTTTGTTGTGCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR TCA 90 bp | TTCAAGGCTTCCTTAGAACACACACAGCAGGAGAATGGAAACAGAACAGCGTTTGGAGCCCAGCTCTTCTaGTGTTTGAAGGGAAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FKASLEHTQQENGNRTAFGAQLF*CLKGRR Trigger: CCTCCTTCCCTTCAAACATCAGAAGAGCTGGGCTCC...AAACGCTGTTCTGTTTCCATTCTCCTGCTGTGTGTGTTCTAAGGAAGCCTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR TCA 90 bp | CAGCACAACAAACATATTTACTGCCACCCCGAAAGGGAAGAAATGGCAGTTCAGACCGCCCCAGCTCCTTaGAGTCTTTGTAGAGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QHNKHIYCHPEREEMAVQTAPAP*SLCRAQ Trigger: TTGAGCTCTACAAAGACTTCAAGGAGCTGGGGCGGT...CTGAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTAAATATGTTTGTTGTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR GCA 90 bp | GCACAACAAACATATTTACTGCCACCCCGAAAGGGAAGAAATGGCAGTTCAGTGTCTGCTGCCTCAGCTTaGCAGACTTTCTCACTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AQQTYLLPPRKGRNGSSVSAASA*QTFSLV Trigger: CACCAGTGAGAAAGTCTGGCAAGCTGAGGCAGCAGA...CACTGAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTAAATATGTTTGTTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR GCA 90 bp | ACTAAGGTTCAAGGCTTCCTTAGAACACACACAGCAGGAGAATGGAAACAGAACGACATCGGCCTGGGCTaGTCCTGTGATCATGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TKVQGFLRTHTAGEWKQNDIGLG*SCDHVW Trigger: CCAAACATGATCACAGGAGCAGCCCAGGCCGATGTC...GTTCTGTTTCCATTCTCCTGCTGTGTGTGTTCTAAGGAAGCCTTGAACCTTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGCCTCTGGCAGCTGGCAACTGGGAAGTTTTGCAGAGTAATCCTTAATACTGCACTTCAAATCCCATaGTCTGCTTCTTCCCGGATA | + |
|
Preference number: 4 (lower is better) Translates to: AGLWQLATGKFCRVILNTALQIP*SASSRI Trigger: TATCCGGGAAGAAGCAGACCATGGGATTTGAAGTGC...AGTATTAAGGATTACTCTGCAAAACTTCCCAGTTGCCAGCTGCCAGAGGCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| 3UTR CAA 72 bp | AACACACACAGCAGGAGAATGGAAACAGAACAGCGTTaGGATTTGGTTTGGCTGGAAGTCGAGTCCACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NTHSRRMETEQR*DLVWLEVESTE Trigger: CTCAGTGGACTCGACTTCCAGCCAAACCAAATCCAAACGCTGTTCTGTTTCCATTCTCCTGCTGTGTGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR TCA 90 bp | ATCGTTTTTGCAATCAAATCAGAAAGGGATAAATTCTCCAGGTCTCTCGTGGGGAGGGTTGTCACGGCGTaGGTAAATGAACTGAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: IVFAIKSERDKFSRSLVGRVVTA*VNELSG Trigger: GCCGCTCAGTTCATTTACTCACGCCGTGACAACCCT...CCCCACGAGAGACCTGGAGAATTTATCCCTTTCTGATTTGATTGCAAAAACGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061324.6 |
||
| CDS-3UTR TCA 90 bp | GCACAACAAACATATTTACTGCCACCCCGAAAGGGAAGAAATGGCAGTTCAGTGCCTGATCCATCTTATTaGCAGCCACAGCAAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AQQTYLLPPRKGRNGSSVPDPSY*QPQQAV Trigger: CACAGCTTGCTGTGGCTGTCAATAAGATGGATCAGG...CACTGAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTAAATATGTTTGTTGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR TCA 90 bp | GACTCTCCAAGCCCCACTAAGGTTCAAGGCTTCCTTAGAACACACACAGCAGGATGTTGCCAATTTACCTaGTCCATCTTATTGACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: DSPSPTKVQGFLRTHTAGCCQFT*SILLTA Trigger: GGCTGTCAATAAGATGGATCAGGTAAATTGGCAACA...TCCTGCTGTGTGTGTTCTAAGGAAGCCTTGAACCTTAGTGGGGCTTGGAGAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR TCA 90 bp | TGGAAACAGAACAGCGTTTGGATTTGGTTTGGCTGGAAGTCGAGTCCACTGAGTTCGGAACTTCAATATTaGAGACGAGGATTCGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WKQNSVWIWFGWKSSPLSSELQY*RRGFGL Trigger: GAGCCCGAATCCTCGTCTTCAATATTGAAGTTCCGA...ACTCAGTGGACTCGACTTCCAGCCAAACCAAATCCAAACGCTGTTCTGTTTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR TCA 90 bp | AGTGTCTCTCATCTAACAATCATGACTGCATGCTGTTTCCTTAGCTGCACCACTACCGCCCCAGCTCCTTaGAGTCTTTGTAGAGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SVSHLTIMTACCFLSCTTTAPAP*SLCRAQ Trigger: TTGAGCTCTACAAAGACTTCAAGGAGCTGGGGCGGT...AGTGGTGCAGCTAAGGAAACAGCATGCAGTCATGATTGTTAGATGAGAGACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR GCA 90 bp | CAGCACAACAAACATATTTACTGCCACCCCGAAAGGGAAGAAATGGCAGTTCAGCTTCAAACTCTCCTCTaGTGGCATCAACGACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QHNKHIYCHPEREEMAVQLQTLL*WHQRPG Trigger: TCCTGGTCGTTGATGCCAGCAGAGGAGAGTTTGAAG...CTGAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTAAATATGTTTGTTGTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR GCA 90 bp | CAGCACAACAAACATATTTACTGCCACCCCGAAAGGGAAGAAATGGCAGTTCAGACTGGTCTTTGTGTCTaGAGCTCTACCAAGGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QHNKHIYCHPEREEMAVQTGLCV*SSTKAF Trigger: GAACGCCTTGGTAGAGCTGCAGACACAAAGACCAGT...CTGAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTAAATATGTTTGTTGTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR GCA 90 bp | CTCAGCACAACAAACATATTTACTGCCACCCCGAAAGGGAAGAAATGGCAGTTCACTGGTCTTTGTGTCTaGAGCTCTACCAAGGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSTTNIFTATPKGKKWQFTGLCV*SSTKAF Trigger: GAACGCCTTGGTAGAGCTGCAGACACAAAGACCAGT...GAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTAAATATGTTTGTTGTGCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR CCA 90 bp | TTCAAGGCTTCCTTAGAACACACACAGCAGGAGAATGGAAACAGAACAGCGTTTTGGGAGGGCAGATTTTaGAGTGCCGGTCTCAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FKASLEHTQQENGNRTAFWEGRF*SAGLRN Trigger: ATTCCTGAGACCGGCACTCCAAAATCTGCCCTCCCA...AAACGCTGTTCTGTTTCCATTCTCCTGCTGTGTGTGTTCTAAGGAAGCCTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR CCA 90 bp | CAGCACAACAAACATATTTACTGCCACCCCGAAAGGGAAGAAATGGCAGTTCAGTTTCATTGGGTGGCATaGCTAACAGTCGGTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: QHNKHIYCHPEREEMAVQFHWVA*LTVGHQ Trigger: CTGGTGACCGACTGTTAGCCATGCCACCCAATGAAA...CTGAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTAAATATGTTTGTTGTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR TCA 90 bp | GCACAACAAACATATTTACTGCCACCCCGAAAGGGAAGAAATGGCAGTTCAGTGCCACGCATATGCAAATaGAGCCTTGCCAGCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: AQQTYLLPPRKGRNGSSVPRICK*SLASLF Trigger: AAAAAGGCTGGCAAGGCTTCATTTGCATATGCGTGG...CACTGAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTAAATATGTTTGTTGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR TCA 90 bp | TTCAAGGCTTCCTTAGAACACACACAGCAGGAGAATGGAAACAGAACAGCGTTTCCTGATCCATCTTATTaGCAGCCACAGCAAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FKASLEHTQQENGNRTAFPDPSY*QPQQAV Trigger: CACAGCTTGCTGTGGCTGTCAATAAGATGGATCAGG...AAACGCTGTTCTGTTTCCATTCTCCTGCTGTGTGTGTTCTAAGGAAGCCTTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR TCA 90 bp | CAGCACAACAAACATATTTACTGCCACCCCGAAAGGGAAGAAATGGCAGTTCAGTCGGAACTTCAATATTaGAGACGAGGATTCGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QHNKHIYCHPEREEMAVQSELQY*RRGFGL Trigger: GAGCCCGAATCCTCGTCTTCAATATTGAAGTTCCGA...CTGAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTAAATATGTTTGTTGTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR GCA 90 bp | CAGCACAACAAACATATTTACTGCCACCCCGAAAGGGAAGAAATGGCAGTTCAGTTCTCCTTCCAAGGCTaGACACCATCTTGTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QHNKHIYCHPEREEMAVQFSFQG*TPSCSR Trigger: TCTGGAACAAGATGGTGTGCAGCCTTGGAAGGAGAA...CTGAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTAAATATGTTTGTTGTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR GCA 90 bp | CAGCACAACAAACATATTTACTGCCACCCCGAAAGGGAAGAAATGGCAGTTCAGTTCACGTCTATCTGCTaGCTCAGCTTGCCAGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: QHNKHIYCHPEREEMAVQFTSIC*LSLPDF Trigger: AAAGTCTGGCAAGCTGAGGCAGCAGATAGACGTGAA...CTGAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTAAATATGTTTGTTGTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGGCAGCTGGCAACTGGGAAGTTTTGCAGAGTAATCCTTAATACTTGTTGGTCGACAGGCTCATCGTaGAGAGTGATTCCTTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LWQLATGKFCRVILNTCWSTGSS*RVIPLA Trigger: TGCTAAAGGAATCACTCTGCACGATGAGCCTGTCGA...CCAACAAGTATTAAGGATTACTCTGCAAAACTTCCCAGTTGCCAGCTGCCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGCCTCTGGCAGCTGGCAACTGGGAAGTTTTGCAGAGTAATCCTTAATACTGGAATGAAATCCTTATaGCCTGGAGCATCCATTAAG | + |
|
Preference number: 4 (lower is better) Translates to: AGLWQLATGKFCRVILNTGMKSL*PGASIK Trigger: CTTAATGGATGCTCCAGGCCATAAGGATTTCATTCC...AGTATTAAGGATTACTCTGCAAAACTTCCCAGTTGCCAGCTGCCAGAGGCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR CCA 90 bp | ACTAAGGTTCAAGGCTTCCTTAGAACACACACAGCAGGAGAATGGAAACAGAACTTTCATTGGGTGGCATaGCTAACAGTCGGTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: TKVQGFLRTHTAGEWKQNFHWVA*LTVGHQ Trigger: CTGGTGACCGACTGTTAGCCATGCCACCCAATGAAA...GTTCTGTTTCCATTCTCCTGCTGTGTGTGTTCTAAGGAAGCCTTGAACCTTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR CCA 90 bp | ATGATCCTACAAAACCTTTACATTGCGATTAAAAAGCTTACAACAGTAGCCAAGCTGAGGGTGGCAGTCTaGCTGACAGCTGGCGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: MILQNLYIAIKKLTTVAKLRVAV*LTAGVH Trigger: GTGCACGCCAGCTGTCAGCCAGACTGCCACCCTCAG...CTTGGCTACTGTTGTAAGCTTTTTAATCGCAATGTAAAGGTTTTGTAGGATCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092674.14 |
||
| CDS-3UTR TCA 90 bp | CAGCACAACAAACATATTTACTGCCACCCCGAAAGGGAAGAAATGGCAGTTCAGAGTACCTCTCTCATGTaGTCAAGGCATGAATACAGG | + |
|
Preference number: 4 (lower is better) Translates to: QHNKHIYCHPEREEMAVQSTSLM*SRHEYR Trigger: CCTGTATTCATGCCTTGATCACATGAGAGAGGTACT...CTGAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTAAATATGTTTGTTGTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR GCA 90 bp | ACTAAGGTTCAAGGCTTCCTTAGAACACACACAGCAGGAGAATGGAAACAGAACTTCTCCTTCCAAGGCTaGACACCATCTTGTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TKVQGFLRTHTAGEWKQNFSFQG*TPSCSR Trigger: TCTGGAACAAGATGGTGTGCAGCCTTGGAAGGAGAA...GTTCTGTTTCCATTCTCCTGCTGTGTGTGTTCTAAGGAAGCCTTGAACCTTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR GCA 90 bp | ACTAAGGTTCAAGGCTTCCTTAGAACACACACAGCAGGAGAATGGAAACAGAACTTCACGTCTATCTGCTaGCTCAGCTTGCCAGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: TKVQGFLRTHTAGEWKQNFTSIC*LSLPDF Trigger: AAAGTCTGGCAAGCTGAGGCAGCAGATAGACGTGAA...GTTCTGTTTCCATTCTCCTGCTGTGTGTGTTCTAAGGAAGCCTTGAACCTTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR GCA 90 bp | TTCAAGGCTTCCTTAGAACACACACAGCAGGAGAATGGAAACAGAACAGCGTTTTCGACAGGCTCATCGTaGAGAGTGATTCCTTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FKASLEHTQQENGNRTAFSTGSS*RVIPLA Trigger: TGCTAAAGGAATCACTCTGCACGATGAGCCTGTCGA...AAACGCTGTTCTGTTTCCATTCTCCTGCTGTGTGTGTTCTAAGGAAGCCTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR CCA 90 bp | TTCAAGGCTTCCTTAGAACACACACAGCAGGAGAATGGAAACAGAACAGCGTTTGCACTTCAAATCCCATaGTCTGCTTCTTCCCGGATA | + |
|
Preference number: 4 (lower is better) Translates to: FKASLEHTQQENGNRTAFALQIP*SASSRI Trigger: TATCCGGGAAGAAGCAGACCATGGGATTTGAAGTGC...AAACGCTGTTCTGTTTCCATTCTCCTGCTGTGTGTGTTCTAAGGAAGCCTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR TCA 90 bp | GTAGCATCTTTGTTACTTAAGAACAGATTTCTGTCACTTCGCATTACACTCCAGAGCTCTTCTGATGTTTaGAGGGAAGGAGGTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VASLLLKNRFLSLRITLQSSSDV*REGGGR Trigger: CCTCCCACCTCCTTCCCTTCAAACATCAGAAGAGCT...CTGGAGTGTAATGCGAAGTGACAGAAATCTGTTCTTAAGTAACAAAGATGCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR TCA 90 bp | GCACAACAAACATATTTACTGCCACCCCGAAAGGGAAGAAATGGCAGTTCAGTGTGTTGCCAATTTACCTaGTCCATCTTATTGACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AQQTYLLPPRKGRNGSSVCCQFT*SILLTA Trigger: GGCTGTCAATAAGATGGATCAGGTAAATTGGCAACA...CACTGAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTAAATATGTTTGTTGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR GCA 90 bp | CAGCACAACAAACATATTTACTGCCACCCCGAAAGGGAAGAAATGGCAGTTCAGTCCTTAAAACCTGCTTaGTTAAGAAAGTGCCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QHNKHIYCHPEREEMAVQSLKPA*LRKCPS Trigger: ACTCGGGCACTTTCTTAAGCAAGCAGGTTTTAAGGA...CTGAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTAAATATGTTTGTTGTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR GCA 90 bp | GCACAACAAACATATTTACTGCCACCCCGAAAGGGAAGAAATGGCAGTTCAGTGACTCTCCTTAAAACCTaGTTGCTTAAGAAAGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AQQTYLLPPRKGRNGSSVTLLKT*LLKKVP Trigger: GGGCACTTTCTTAAGCAAGCAGGTTTTAAGGAGAGT...CACTGAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTAAATATGTTTGTTGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR TCA 90 bp | TCAGAAAGTTGGATATCAAATGAAGTATCTGAGGTCCAAGTCACAATATCATGTAGGGTTGTCACGGCGTaGGTAAATGAACTGAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SESWISNEVSEVQVTISCRVVTA*VNELSG Trigger: GCCGCTCAGTTCATTTACTCACGCCGTGACAACCCT...ACATGATATTGTGACTTGGACCTCAGATACTTCATTTGATATCCAACTTTCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061324.6 ENSMUST00000092674.14 |
||
| CDS-3UTR TCA 90 bp | GCACAACAAACATATTTACTGCCACCCCGAAAGGGAAGAAATGGCAGTTCAGTGCAGATCCTTGATCTTTaGAGACATCAGACACACATA | + |
|
Preference number: 4 (lower is better) Translates to: AQQTYLLPPRKGRNGSSVQILDL*RHQTHI Trigger: TATGTGTGTCTGATGTCTTCAAAGATCAAGGATCTG...CACTGAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTAAATATGTTTGTTGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR GCA 90 bp | TGGAAACAGAACAGCGTTTGGATTTGGTTTGGCTGGAAGTCGAGTCCACTGAGTTTTGTGTTTCAGAATTaGCTCAGTCAGTATGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: WKQNSVWIWFGWKSSPLSFVFQN*LSQYVI Trigger: GATGACATACTGACTGAGGCAATTCTGAAACACAAA...ACTCAGTGGACTCGACTTCCAGCCAAACCAAATCCAAACGCTGTTCTGTTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR GCA 90 bp | TTCAAGGCTTCCTTAGAACACACACAGCAGGAGAATGGAAACAGAACAGCGTTTTCCTTAAAACCTGCTTaGTTAAGAAAGTGCCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FKASLEHTQQENGNRTAFSLKPA*LRKCPS Trigger: ACTCGGGCACTTTCTTAAGCAAGCAGGTTTTAAGGA...AAACGCTGTTCTGTTTCCATTCTCCTGCTGTGTGTGTTCTAAGGAAGCCTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR GCA 90 bp | CAGCACAACAAACATATTTACTGCCACCCCGAAAGGGAAGAAATGGCAGTTCAGTTGAAGGAATCAATCTaGTCCAATAAGCACATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QHNKHIYCHPEREEMAVQLKESI*SNKHIP Trigger: AGGGATGTGCTTATTGGAGCAGATTGATTCCTTCAA...CTGAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTAAATATGTTTGTTGTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR GCA 90 bp | TCAGAAAGTTGGATATCAAATGAAGTATCTGAGGTCCAAGTCACAATATCATGTTTAAGAAGCTCACTCTaGCCGCTGTCTGAGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SESWISNEVSEVQVTISCLRSSL*PLSEGG Trigger: GCCACCCTCAGACAGCGGGCAGAGTGAGCTTCTTAA...ACATGATATTGTGACTTGGACCTCAGATACTTCATTTGATATCCAACTTTCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092674.14 |
||
| CDS-3UTR CCA 90 bp | ACTAAGGTTCAAGGCTTCCTTAGAACACACACAGCAGGAGAATGGAAACAGAACGGAATGAAATCCTTATaGCCTGGAGCATCCATTAAG | + |
|
Preference number: 4 (lower is better) Translates to: TKVQGFLRTHTAGEWKQNGMKSL*PGASIK Trigger: CTTAATGGATGCTCCAGGCCATAAGGATTTCATTCC...GTTCTGTTTCCATTCTCCTGCTGTGTGTGTTCTAAGGAAGCCTTGAACCTTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR TCA 90 bp | AGTGTCTCTCATCTAACAATCATGACTGCATGCTGTTTCCTTAGCTGCACCACTCAGATCCTTGATCTTTaGAGACATCAGACACACATA | + |
|
Preference number: 4 (lower is better) Translates to: SVSHLTIMTACCFLSCTTQILDL*RHQTHI Trigger: TATGTGTGTCTGATGTCTTCAAAGATCAAGGATCTG...AGTGGTGCAGCTAAGGAAACAGCATGCAGTCATGATTGTTAGATGAGAGACACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGGCAGCTGGCAACTGGGAAGTTTTGCAGAGTAATCCTTAATACTTGTTGGTTTGTGTTTCAGAATTaGCTCAGTCAGTATGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LWQLATGKFCRVILNTCWFVFQN*LSQYVI Trigger: GATGACATACTGACTGAGGCAATTCTGAAACACAAA...CCAACAAGTATTAAGGATTACTCTGCAAAACTTCCCAGTTGCCAGCTGCCAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR GCA 90 bp | ACTAAGGTTCAAGGCTTCCTTAGAACACACACAGCAGGAGAATGGAAACAGAACTTGAAGGAATCAATCTaGTCCAATAAGCACATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TKVQGFLRTHTAGEWKQNLKESI*SNKHIP Trigger: AGGGATGTGCTTATTGGAGCAGATTGATTCCTTCAA...GTTCTGTTTCCATTCTCCTGCTGTGTGTGTTCTAAGGAAGCCTTGAACCTTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR GCA 90 bp | TCAGAAAGTTGGATATCAAATGAAGTATCTGAGGTCCAAGTCACAATATCATGTAGCACTGGCCAGAGCTaGTTCCTCTGTGTTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SESWISNEVSEVQVTISCSTGQS*FLCVPQ Trigger: TTGAGGAACACAGAGGAAGCAGCTCTGGCCAGTGCT...ACATGATATTGTGACTTGGACCTCAGATACTTCATTTGATATCCAACTTTCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092674.14 |
||
| CDS-3UTR CCA 90 bp | GTAGCATCTTTGTTACTTAAGAACAGATTTCTGTCACTTCGCATTACACTCCAGCAGTACAGGTTTCATTaGGTGGCATGGCTAACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VASLLLKNRFLSLRITLQQYRFH*VAWLTV Trigger: GACTGTTAGCCATGCCACCCAATGAAACCTGTACTG...CTGGAGTGTAATGCGAAGTGACAGAAATCTGTTCTTAAGTAACAAAGATGCTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR GCA 90 bp | TCAGAAAGTTGGATATCAAATGAAGTATCTGAGGTCCAAGTCACAATATCATGTCAAGAGTGCGCCTCTTaGAGCTTTTCAGTGGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: SESWISNEVSEVQVTISCQECAS*SFSVGN Trigger: GTTACCCACTGAAAAGCTGCAAGAGGCGCACTCTTG...ACATGATATTGTGACTTGGACCTCAGATACTTCATTTGATATCCAACTTTCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092674.14 |
||
| CDS-3UTR CCA 90 bp | ATGATCCTACAAAACCTTTACATTGCGATTAAAAAGCTTACAACAGTAGCCAAGTCTCCAGGTCTCTCGTaGGGGCAGCTTTACAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: MILQNLYIAIKKLTTVAKSPGLS*GQLYKM Trigger: CATTTTGTAAAGCTGCCCCCACGAGAGACCTGGAGA...CTTGGCTACTGTTGTAAGCTTTTTAATCGCAATGTAAAGGTTTTGTAGGATCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000092674.14 |
||
| CDS-3UTR TCA 90 bp | ATGATCCTACAAAACCTTTACATTGCGATTAAAAAGCTTACAACAGTAGCCAAGGTGACGTGGCTCAAGTaGAGAACTATGGGATCCATA | + |
|
Preference number: 4 (lower is better) Translates to: MILQNLYIAIKKLTTVAKVTWLK*RTMGSI Trigger: TATGGATCCCATAGTTCTTCACTTGAGCCACGTCAC...CTTGGCTACTGTTGTAAGCTTTTTAATCGCAATGTAAAGGTTTTGTAGGATCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092674.14 |
||
| CDS-3UTR TCA 90 bp | ATGATCCTACAAAACCTTTACATTGCGATTAAAAAGCTTACAACAGTAGCCAAGTGCACGGGAGTACTTTaGAAATCAGGTAGTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MILQNLYIAIKKLTTVAKCTGVL*KSGSEL Trigger: CAGCTCACTACCTGATTTTCAAAGTACTCCCGTGCA...CTTGGCTACTGTTGTAAGCTTTTTAATCGCAATGTAAAGGTTTTGTAGGATCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092674.14 |
||
| CDS-3UTR TCA 90 bp | ATGATCCTACAAAACCTTTACATTGCGATTAAAAAGCTTACAACAGTAGCCAAGTGGTGTTACAGCAACTaGTGGGTCAACTACAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: MILQNLYIAIKKLTTVAKWCYSN*WVNYRL Trigger: AAGCCTGTAGTTGACCCATCAGTTGCTGTAACACCA...CTTGGCTACTGTTGTAAGCTTTTTAATCGCAATGTAAAGGTTTTGTAGGATCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092674.14 |
||
| CDS-3UTR GCA 90 bp | ATGATCCTACAAAACCTTTACATTGCGATTAAAAAGCTTACAACAGTAGCCAAGTTCTCCTTCCAAGGCTaGACACCATCTTGTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: MILQNLYIAIKKLTTVAKFSFQG*TPSCSR Trigger: TCTGGAACAAGATGGTGTGCAGCCTTGGAAGGAGAA...CTTGGCTACTGTTGTAAGCTTTTTAATCGCAATGTAAAGGTTTTGTAGGATCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061324.6 ENSMUST00000092674.14 |
||
| CDS-3UTR GCA 90 bp | TCAGAAAGTTGGATATCAAATGAAGTATCTGAGGTCCAAGTCACAATATCATGTTTCTCCTTCCAAGGCTaGACACCATCTTGTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SESWISNEVSEVQVTISCFSFQG*TPSCSR Trigger: TCTGGAACAAGATGGTGTGCAGCCTTGGAAGGAGAA...ACATGATATTGTGACTTGGACCTCAGATACTTCATTTGATATCCAACTTTCTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061324.6 ENSMUST00000092674.14 |
||
| CDS-3UTR GCA 90 bp | GTAGCATCTTTGTTACTTAAGAACAGATTTCTGTCACTTCGCATTACACTCCAGACTCTCCTTAAAACCTaGTTGCTTAAGAAAGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VASLLLKNRFLSLRITLQTLLKT*LLKKVP Trigger: GGGCACTTTCTTAAGCAAGCAGGTTTTAAGGAGAGT...CTGGAGTGTAATGCGAAGTGACAGAAATCTGTTCTTAAGTAACAAAGATGCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR GCA 90 bp | TTTGAACTCAGAACTTTAGTGTCTGGTGTTACAGCAACTGATGGGTCAACTACATTTGTGTTTCAGAATTaGCTCAGTCAGTATGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: FELRTLVSGVTATDGSTTFVFQN*LSQYVI Trigger: GATGACATACTGACTGAGGCAATTCTGAAACACAAA...TGTAGTTGACCCATCAGTTGCTGTAACACCAGACACTAAAGTTCTGAGTTCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061324.6 |
||
| CDS-3UTR GCA 90 bp | GTAGCATCTTTGTTACTTAAGAACAGATTTCTGTCACTTCGCATTACACTCCAGACGGACAAAGCCTTCTaGACATCAAATTTGTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VASLLLKNRFLSLRITLQTDKAF*TSNLCF Trigger: GAAACACAAATTTGATGTGCAGAAGGCTTTGTCCGT...CTGGAGTGTAATGCGAAGTGACAGAAATCTGTTCTTAAGTAACAAAGATGCTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR GCA 90 bp | TCAGAAAGTTGGATATCAAATGAAGTATCTGAGGTCCAAGTCACAATATCATGTTGTAGAGTTCAAGAGTaGGCCTCTTGCAGCTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SESWISNEVSEVQVTISCCRVQE*ASCSFS Trigger: TGAAAAGCTGCAAGAGGCGCACTCTTGAACTCTACA...ACATGATATTGTGACTTGGACCTCAGATACTTCATTTGATATCCAACTTTCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092674.14 |
||
| 3UTR CAA 72 bp | GAGGCTCTTTTGGGTTTCATACTATCCTTAGTAGAATaGGAAGGTTTCCCTAACTTTGAACTCAGAACTTTA | + |
|
Preference number: 4 (lower is better) Translates to: EALLGFILSLVE*EGFPNFELRTL Trigger: TAAAGTTCTGAGTTCAAAGTTAGGGAAACCTTCCAATTCTACTAAGGATAGTATGAAACCCAAAAGAGCCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061324.6 |
||
| CDS-3UTR TCA 90 bp | TCAGAAAGTTGGATATCAAATGAAGTATCTGAGGTCCAAGTCACAATATCATGTGTGAACATTTTGGGGTaGAACTCCAAAGGAAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SESWISNEVSEVQVTISCVNILG*NSKGRK Trigger: TTTTCTTCCTTTGGAGTTTCACCCCAAAATGTTCAC...ACATGATATTGTGACTTGGACCTCAGATACTTCATTTGATATCCAACTTTCTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092674.14 |
||
| CDS-3UTR CCA 90 bp | ATGATCCTACAAAACCTTTACATTGCGATTAAAAAGCTTACAACAGTAGCCAAGGATGGACTTTCACGCTaGGAAAATGGTAAACTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: MILQNLYIAIKKLTTVAKDGLSR*ENGKLL Trigger: TAACAGTTTACCATTTTCCCAGCGTGAAAGTCCATC...CTTGGCTACTGTTGTAAGCTTTTTAATCGCAATGTAAAGGTTTTGTAGGATCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000092674.14 |
||
| CDS-3UTR TCA 90 bp | ATGATCCTACAAAACCTTTACATTGCGATTAAAAAGCTTACAACAGTAGCCAAGTCCATATTCTGCTATTaGGCTACAACAATCAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: MILQNLYIAIKKLTTVAKSIFCY*ATTIKR Trigger: CCTTTTGATTGTTGTAGCTCAATAGCAGAATATGGA...CTTGGCTACTGTTGTAAGCTTTTTAATCGCAATGTAAAGGTTTTGTAGGATCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000092674.14 |
||
| CDS-3UTR TCA 90 bp | TCAGAAAGTTGGATATCAAATGAAGTATCTGAGGTCCAAGTCACAATATCATGTACTAAGATCAATATTTaGATCAACTTCAGGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SESWISNEVSEVQVTISCTKINI*INFRAP Trigger: AGGAGCCCTGAAGTTGATTCAAATATTGATCTTAGT...ACATGATATTGTGACTTGGACCTCAGATACTTCATTTGATATCCAACTTTCTGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092674.14 |
||
| CDS-3UTR GCA 90 bp | ATGATCCTACAAAACCTTTACATTGCGATTAAAAAGCTTACAACAGTAGCCAAGTTTGTGTTTCAGAATTaGCTCAGTCAGTATGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: MILQNLYIAIKKLTTVAKFVFQN*LSQYVI Trigger: GATGACATACTGACTGAGGCAATTCTGAAACACAAA...CTTGGCTACTGTTGTAAGCTTTTTAATCGCAATGTAAAGGTTTTGTAGGATCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061324.6 ENSMUST00000092674.14 |
||
| CDS-3UTR CCA 90 bp | TCAGAAAGTTGGATATCAAATGAAGTATCTGAGGTCCAAGTCACAATATCATGTCTTCAGTGTTTATACTaGAATTATTTTCCACTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SESWISNEVSEVQVTISCLQCLY*NYFPLG Trigger: GCCCAGTGGAAAATAATTCCAGTATAAACACTGAAG...ACATGATATTGTGACTTGGACCTCAGATACTTCATTTGATATCCAACTTTCTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092674.14 |
||
| CDS-3UTR CCA 90 bp | ATGATCCTACAAAACCTTTACATTGCGATTAAAAAGCTTACAACAGTAGCCAAGCTTTGGGACAAACTCTaGAGTTTTTATCAAGACACT | + |
|
Preference number: 4 (lower is better) Translates to: MILQNLYIAIKKLTTVAKLWDKL*SFYQDT Trigger: AGTGTCTTGATAAAAACTCCAGAGTTTGTCCCAAAG...CTTGGCTACTGTTGTAAGCTTTTTAATCGCAATGTAAAGGTTTTGTAGGATCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000092674.14 |
||
| CDS-3UTR CCA 90 bp | TCAGAAAGTTGGATATCAAATGAAGTATCTGAGGTCCAAGTCACAATATCATGTTCAAGTGAAGAACTATaGGATCCATATTCTGCTATT | + |
|
Preference number: 4 (lower is better) Translates to: SESWISNEVSEVQVTISCSSEEL*DPYSAI Trigger: AATAGCAGAATATGGATCCCATAGTTCTTCACTTGA...ACATGATATTGTGACTTGGACCTCAGATACTTCATTTGATATCCAACTTTCTGA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092674.14 |
||
| CDS GCA 90 bp | GGAGGTCTTACCACATCAGCACCTAGGCTCTTAAGAAGCTCACTCTaGCCGCTGTCTGAGGGTGGCAGTCTGGCTGACAGCTGGCGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: GGLTTSAPRLLRSSL*PLSEGGSLADSWRA Trigger: TGCACGCCAGCTGTCAGCCAGACTGCCACCCTCAGACAGCGGGCAGAGTGAGCTTCTTAAGAGCCTAGGTGCTGATGTGGTAAGACCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092674.14 |
||
| CDS GCA 90 bp | TTCCCGCCCTGCCGCTTTTCCAATTCCGCTTTCACGTCTATCTGCTaGCTCAGCTTGCCAGACTTTCTCACTGGTGTCGGAGTGGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: FPPCRFSNSAFTSIC*LSLPDFLTGVGVEP Trigger: GGGCTCCACTCCGACACCAGTGAGAAAGTCTGGCAAGCTGAGGCAGCAGATAGACGTGAAAGCGGAATTGGAAAAGCGGCAGGGCGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS GCA 90 bp | TGCTTCCCGCCCTGCCGCTTTTCCAATTCCGCTTTCACGTCTATCTaGTGCCTCAGCTTGCCAGACTTTCTCACTGGTGTCGGAGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CFPPCRFSNSAFTSI*CLSLPDFLTGVGVE Trigger: CTCCACTCCGACACCAGTGAGAAAGTCTGGCAAGCTGAGGCAGCAGATAGACGTGAAAGCGGAATTGGAAAAGCGGCAGGGCGGGAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS CCA 90 bp | CTATCTGCTGCCTCAGCTTGCCAGACTTTCTCACTGGTGTCGGAGTaGAGCCCAGCTCTTCTGATGTTTGAAGGGAAGGAGGTGGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LSAASACQTFSLVSE*SPALLMFEGKEVGG Trigger: CCCTCCCACCTCCTTCCCTTCAAACATCAGAAGAGCTGGGCTCCACTCCGACACCAGTGAGAAAGTCTGGCAAGCTGAGGCAGCAGATAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS CCA 90 bp | AAACCGCCCCAGCTCCTTGAAGTCTTTGTAGAGCTCAAGAGCCACTaGTCTTTGTGTCTGCAGCTCTACCAAGGCGTTCTGGCCCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: KPPQLLEVFVELKSH*SLCLQLYQGVLALG Trigger: ACCAAGGGCCAGAACGCCTTGGTAGAGCTGCAGACACAAAGACCAGTGGCTCTTGAGCTCTACAAAGACTTCAAGGAGCTGGGGCGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR CAA 90 bp | TGGAAACAGAACAGCGTTTGGATTTGGTTTGGCTGGAAGTCGAGTCCACTGAGTCCAATGACCACTAAGTaGAGGAGCTGCTTCCCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: WKQNSVWIWFGWKSSPLSPMTTK*RSCFPP Trigger: GGGCGGGAAGCAGCTCCTCAACTTAGTGGTCATTGG...ACTCAGTGGACTCGACTTCCAGCCAAACCAAATCCAAACGCTGTTCTGTTTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS GCA 90 bp | GATGTCCATCCCAACCAAGGTAAGATTTACGTGATCGCCTGCTGCTaGCCAATCGACAGGCTCATCGTGCAGAGTGATTCCTTTAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: DVHPNQGKIYVIACC*PIDRLIVQSDSFSS Trigger: ACTGCTAAAGGAATCACTCTGCACGATGAGCCTGTCGATTGGGCAGCAGCAGGCGATCACGTAAATCTTACCTTGGTTGGGATGGACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS GCA 90 bp | GATGATGTCCATCCCAACCAAGGTAAGATTTACGTGATCGCCTGCTaGTGCCCAATCGACAGGCTCATCGTGCAGAGTGATTCCTTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: DDVHPNQGKIYVIAC*CPIDRLIVQSDSFS Trigger: GCTAAAGGAATCACTCTGCACGATGAGCCTGTCGATTGGGCAGCAGCAGGCGATCACGTAAATCTTACCTTGGTTGGGATGGACATCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR CAA 90 bp | TGGAAACAGAACAGCGTTTGGATTTGGTTTGGCTGGAAGTCGAGTCCACTGAGTAGGCTGCACACCATCTaGTTCCAGAACCACGGACAA | + |
|
Preference number: 5 (lower is better) Translates to: WKQNSVWIWFGWKSSPLSRLHTI*FQNHGQ Trigger: TTGTCCGTGGTTCTGGAACAAGATGGTGTGCAGCCT...ACTCAGTGGACTCGACTTCCAGCCAAACCAAATCCAAACGCTGTTCTGTTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR CAA 90 bp | GAATGGAAACAGAACAGCGTTTGGATTTGGTTTGGCTGGAAGTCGAGTCCACTGATCTGCTGCCTCAGCTaGCCAGACTTTCTCACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: EWKQNSVWIWFGWKSSPLICCLS*PDFLTG Trigger: ACCAGTGAGAAAGTCTGGCAAGCTGAGGCAGCAGAT...CAGTGGACTCGACTTCCAGCCAAACCAAATCCAAACGCTGTTCTGTTTCCATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR CAA 90 bp | AGTGTCTCTCATCTAACAATCATGACTGCATGCTGTTTCCTTAGCTGCACCACTCCAATGACCACTAAGTaGAGGAGCTGCTTCCCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SVSHLTIMTACCFLSCTTPMTTK*RSCFPP Trigger: GGGCGGGAAGCAGCTCCTCAACTTAGTGGTCATTGG...AGTGGTGCAGCTAAGGAAACAGCATGCAGTCATGATTGTTAGATGAGAGACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS TCA 90 bp | ACATTGATTTTGATGATGTCCATCCCAACCAAGGTAAGATTTACGTaGTCGCCTGCTGCTGCCCAATCGACAGGCTCATCGTGCAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: TLILMMSIPTKVRFT*SPAAAQSTGSSCRV Trigger: CACTCTGCACGATGAGCCTGTCGATTGGGCAGCAGCAGGCGATCACGTAAATCTTACCTTGGTTGGGATGGACATCATCAAAATCAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS GCA 90 bp | TTTGATGATGTCCATCCCAACCAAGGTAAGATTTACGTGATCGCCTaGTGCTGCCCAATCGACAGGCTCATCGTGCAGAGTGATTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: FDDVHPNQGKIYVIA*CCPIDRLIVQSDSF Trigger: AAAGGAATCACTCTGCACGATGAGCCTGTCGATTGGGCAGCAGCAGGCGATCACGTAAATCTTACCTTGGTTGGGATGGACATCATCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGCCTCTGGCAGCTGGCAACTGGGAAGTTTTGCAGAGTAATCCTTAATACTTCATTCCGACGTCCATaGTTACTCCCCTTTCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: AGLWQLATGKFCRVILNTSFRRP*LLPFPF Trigger: AAAGGGAAAGGGGAGTAACAATGGACGTCGGAATGA...AGTATTAAGGATTACTCTGCAAAACTTCCCAGTTGCCAGCTGCCAGAGGCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGCCTCTGGCAGCTGGCAACTGGGAAGTTTTGCAGAGTAATCCTTAATACTCAGCCGACATTGATTTaGATGATGTCCATCCCAACC | + |
|
Preference number: 5 (lower is better) Translates to: AGLWQLATGKFCRVILNTQPTLI*MMSIPT Trigger: GGTTGGGATGGACATCATCAAAATCAATGTCGGCTG...AGTATTAAGGATTACTCTGCAAAACTTCCCAGTTGCCAGCTGCCAGAGGCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR CAA 90 bp | GAATGGAAACAGAACAGCGTTTGGATTTGGTTTGGCTGGAAGTCGAGTCCACTGCCCTTGGTCAGCAACTaGGGCTTCTTCTTTGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: EWKQNSVWIWFGWKSSPLPLVSN*GFFFVT Trigger: AGTCACAAAGAAGAAGCCCAAGTTGCTGACCAAGGG...CAGTGGACTCGACTTCCAGCCAAACCAAATCCAAACGCTGTTCTGTTTCCATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR CAA 90 bp | TGGAAACAGAACAGCGTTTGGATTTGGTTTGGCTGGAAGTCGAGTCCACTGAGTAAGAGCCACTGGTCTTaGTGTCTGCAGCTCTACCAA | + |
|
Preference number: 5 (lower is better) Translates to: WKQNSVWIWFGWKSSPLSKSHWS*CLQLYQ Trigger: TTGGTAGAGCTGCAGACACAAAGACCAGTGGCTCTT...ACTCAGTGGACTCGACTTCCAGCCAAACCAAATCCAAACGCTGTTCTGTTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR CAA 90 bp | TTCAAGGCTTCCTTAGAACACACACAGCAGGAGAATGGAAACAGAACAGCGTTTAGGCTGCACACCATCTaGTTCCAGAACCACGGACAA | + |
|
Preference number: 5 (lower is better) Translates to: FKASLEHTQQENGNRTAFRLHTI*FQNHGQ Trigger: TTGTCCGTGGTTCTGGAACAAGATGGTGTGCAGCCT...AAACGCTGTTCTGTTTCCATTCTCCTGCTGTGTGTGTTCTAAGGAAGCCTTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR CAA 90 bp | AGTGTCTCTCATCTAACAATCATGACTGCATGCTGTTTCCTTAGCTGCACCACTATCTGCTGCCTCAGCTaGCCAGACTTTCTCACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SVSHLTIMTACCFLSCTTICCLS*PDFLTG Trigger: ACCAGTGAGAAAGTCTGGCAAGCTGAGGCAGCAGAT...AGTGGTGCAGCTAAGGAAACAGCATGCAGTCATGATTGTTAGATGAGAGACACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR CAA 90 bp | CAGCACAACAAACATATTTACTGCCACCCCGAAAGGGAAGAAATGGCAGTTCAGGCAGTACAGGTTTCATaGGGTGGCATGGCTAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: QHNKHIYCHPEREEMAVQAVQVS*GGMANS Trigger: ACTGTTAGCCATGCCACCCAATGAAACCTGTACTGC...CTGAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTAAATATGTTTGTTGTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR CAA 90 bp | CTCAGCACAACAAACATATTTACTGCCACCCCGAAAGGGAAGAAATGGCAGTTCCCCTTGGTCAGCAACTaGGGCTTCTTCTTTGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: LSTTNIFTATPKGKKWQFPLVSN*GFFFVT Trigger: AGTCACAAAGAAGAAGCCCAAGTTGCTGACCAAGGG...GAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTAAATATGTTTGTTGTGCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR CAA 90 bp | CTCTGGCAGCTGGCAACTGGGAAGTTTTGCAGAGTAATCCTTAATACTTGTTGGAAGAGCCACTGGTCTTaGTGTCTGCAGCTCTACCAA | + |
|
Preference number: 5 (lower is better) Translates to: LWQLATGKFCRVILNTCWKSHWS*CLQLYQ Trigger: TTGGTAGAGCTGCAGACACAAAGACCAGTGGCTCTT...CCAACAAGTATTAAGGATTACTCTGCAAAACTTCCCAGTTGCCAGCTGCCAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR CAA 90 bp | CTCTGGCAGCTGGCAACTGGGAAGTTTTGCAGAGTAATCCTTAATACTTGTTGGTCATTCCGACGTCCATaGTTACTCCCCTTTCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LWQLATGKFCRVILNTCWSFRRP*LLPFPF Trigger: AAAGGGAAAGGGGAGTAACAATGGACGTCGGAATGA...CCAACAAGTATTAAGGATTACTCTGCAAAACTTCCCAGTTGCCAGCTGCCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR CAA 90 bp | CAGCACAACAAACATATTTACTGCCACCCCGAAAGGGAAGAAATGGCAGTTCAGCTCCTTAAAACCTGCTaGCTTAAGAAAGTGCCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: QHNKHIYCHPEREEMAVQLLKTC*LKKVPE Trigger: CTCGGGCACTTTCTTAAGCAAGCAGGTTTTAAGGAG...CTGAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTAAATATGTTTGTTGTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR CAA 90 bp | CTCTGGCAGCTGGCAACTGGGAAGTTTTGCAGAGTAATCCTTAATACTTGTTGGCAGCCGACATTGATTTaGATGATGTCCATCCCAACC | + |
|
Preference number: 5 (lower is better) Translates to: LWQLATGKFCRVILNTCWQPTLI*MMSIPT Trigger: GGTTGGGATGGACATCATCAAAATCAATGTCGGCTG...CCAACAAGTATTAAGGATTACTCTGCAAAACTTCCCAGTTGCCAGCTGCCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR CAA 90 bp | GACTCTCCAAGCCCCACTAAGGTTCAAGGCTTCCTTAGAACACACACAGCAGGAATTTGTGTTTCAGAATaGCCTCAGTCAGTATGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: DSPSPTKVQGFLRTHTAGICVSE*PQSVCH Trigger: ATGACATACTGACTGAGGCAATTCTGAAACACAAAT...TCCTGCTGTGTGTGTTCTAAGGAAGCCTTGAACCTTAGTGGGGCTTGGAGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR CAA 90 bp | AGTGTCTCTCATCTAACAATCATGACTGCATGCTGTTTCCTTAGCTGCACCACTCTCCTTAAAACCTGCTaGCTTAAGAAAGTGCCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: SVSHLTIMTACCFLSCTTLLKTC*LKKVPE Trigger: CTCGGGCACTTTCTTAAGCAAGCAGGTTTTAAGGAG...AGTGGTGCAGCTAAGGAAACAGCATGCAGTCATGATTGTTAGATGAGAGACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGCCTCTGGCAGCTGGCAACTGGGAAGTTTTGCAGAGTAATCCTTAATACTACAAAAGCCAGATCCTaGATCTTTGAAGACATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: AGLWQLATGKFCRVILNTTKARS*IFEDIR Trigger: TCTGATGTCTTCAAAGATCAAGGATCTGGCTTTTGT...AGTATTAAGGATTACTCTGCAAAACTTCCCAGTTGCCAGCTGCCAGAGGCCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR CAA 90 bp | ATGATCCTACAAAACCTTTACATTGCGATTAAAAAGCTTACAACAGTAGCCAAGCAGACTGCGAGCGGTTaGCCAGTTGTGACAGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: MILQNLYIAIKKLTTVAKQTASG*PVVTGE Trigger: TTCCCCTGTCACAACTGGCAAACCGCTCGCAGTCTG...CTTGGCTACTGTTGTAAGCTTTTTAATCGCAATGTAAAGGTTTTGTAGGATCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000092674.14 |
||
| CDS-3UTR CAA 90 bp | CTCAGCACAACAAACATATTTACTGCCACCCCGAAAGGGAAGAAATGGCAGTTCTATGCAAATGAAGCCTaGCCAGCCTTTTTAGATTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSTTNIFTATPKGKKWQFYANEA*PAFLDS Trigger: AGAATCTAAAAAGGCTGGCAAGGCTTCATTTGCATA...GAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTAAATATGTTTGTTGTGCTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR CAA 90 bp | TGGAAACAGAACAGCGTTTGGATTTGGTTTGGCTGGAAGTCGAGTCCACTGAGTCTCTTGAAATCTTTCTaGTTGCCAATTTACCTGATC | + |
|
Preference number: 5 (lower is better) Translates to: WKQNSVWIWFGWKSSPLSLLKSF*LPIYLI Trigger: GATCAGGTAAATTGGCAACAAGAAAGATTTCAAGAG...ACTCAGTGGACTCGACTTCCAGCCAAACCAAATCCAAACGCTGTTCTGTTTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR CAA 90 bp | CAGCACAACAAACATATTTACTGCCACCCCGAAAGGGAAGAAATGGCAGTTCAGACAAAAGCCAGATCCTaGATCTTTGAAGACATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: QHNKHIYCHPEREEMAVQTKARS*IFEDIR Trigger: TCTGATGTCTTCAAAGATCAAGGATCTGGCTTTTGT...CTGAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTAAATATGTTTGTTGTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| CDS TCA 90 bp | TTCCCTTTCTTCTCCAGTTTCATCCAAGACCCACGCATATGCAAATaGAGCCTTGCCAGCCTTTTTAGATTCTTGCTCATACTTATGCAT | + |
|
Preference number: 5 (lower is better) Translates to: FPFFSSFIQDPRICK*SLASLFRFLLILMH Trigger: ATGCATAAGTATGAGCAAGAATCTAAAAAGGCTGGCAAGGCTTCATTTGCATATGCGTGGGTCTTGGATGAAACTGGAGAAGAAAGGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR CAA 90 bp | GCACAACAAACATATTTACTGCCACCCCGAAAGGGAAGAAATGGCAGTTCAGTGTTCTGCACATCAAATTaGTGTTTCAGAATTGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: AQQTYLLPPRKGRNGSSVFCTSN*CFRIAS Trigger: TGAGGCAATTCTGAAACACAAATTTGATGTGCAGAA...CACTGAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTAAATATGTTTGTTGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| CDS-3UTR CAA 90 bp | ATGATCCTACAAAACCTTTACATTGCGATTAAAAAGCTTACAACAGTAGCCAAGAGGCTGCACACCATCTaGTTCCAGAACCACGGACAA | + |
|
Preference number: 5 (lower is better) Translates to: MILQNLYIAIKKLTTVAKRLHTI*FQNHGQ Trigger: TTGTCCGTGGTTCTGGAACAAGATGGTGTGCAGCCT...CTTGGCTACTGTTGTAAGCTTTTTAATCGCAATGTAAAGGTTTTGTAGGATCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061324.6 ENSMUST00000092674.14 |
||
| CDS-3UTR CAA 90 bp | TCAGAAAGTTGGATATCAAATGAAGTATCTGAGGTCCAAGTCACAATATCATGTAGGCTGCACACCATCTaGTTCCAGAACCACGGACAA | + |
|
Preference number: 5 (lower is better) Translates to: SESWISNEVSEVQVTISCRLHTI*FQNHGQ Trigger: TTGTCCGTGGTTCTGGAACAAGATGGTGTGCAGCCT...ACATGATATTGTGACTTGGACCTCAGATACTTCATTTGATATCCAACTTTCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061324.6 ENSMUST00000092674.14 |
||
| CDS-3UTR CAA 90 bp | TTCAAGGCTTCCTTAGAACACACACAGCAGGAGAATGGAAACAGAACAGCGTTTAATATGCAGCCGACATaGATTTTGATGATGTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: FKASLEHTQQENGNRTAFNMQPT*ILMMSI Trigger: GATGGACATCATCAAAATCAATGTCGGCTGCATATT...AAACGCTGTTCTGTTTCCATTCTCCTGCTGTGTGTGTTCTAAGGAAGCCTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR CAA 90 bp | TTCAAGGCTTCCTTAGAACACACACAGCAGGAGAATGGAAACAGAACAGCGTTTATTTGTGTTTCAGAATaGCCTCAGTCAGTATGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: FKASLEHTQQENGNRTAFICVSE*PQSVCH Trigger: ATGACATACTGACTGAGGCAATTCTGAAACACAAAT...AAACGCTGTTCTGTTTCCATTCTCCTGCTGTGTGTGTTCTAAGGAAGCCTTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR CAA 90 bp | AGTGTCTCTCATCTAACAATCATGACTGCATGCTGTTTCCTTAGCTGCACCACTCTCTTGAAATCTTTCTaGTTGCCAATTTACCTGATC | + |
|
Preference number: 5 (lower is better) Translates to: SVSHLTIMTACCFLSCTTLLKSF*LPIYLI Trigger: GATCAGGTAAATTGGCAACAAGAAAGATTTCAAGAG...AGTGGTGCAGCTAAGGAAACAGCATGCAGTCATGATTGTTAGATGAGAGACACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR CAA 90 bp | ATGATCCTACAAAACCTTTACATTGCGATTAAAAAGCTTACAACAGTAGCCAAGGTGGATTACTTAAGCTaGCTGAGACGTTCTGCACGG | + |
|
Preference number: 5 (lower is better) Translates to: MILQNLYIAIKKLTTVAKVDYLS*LRRSAR Trigger: CCGTGCAGAACGTCTCAGCAAGCTTAAGTAATCCAC...CTTGGCTACTGTTGTAAGCTTTTTAATCGCAATGTAAAGGTTTTGTAGGATCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092674.14 |
||
| CDS-3UTR CAA 90 bp | ATCGTTTTTGCAATCAAATCAGAAAGGGATAAATTCTCCAGGTCTCTCGTGGGGATTTGTGTTTCAGAATaGCCTCAGTCAGTATGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: IVFAIKSERDKFSRSLVGICVSE*PQSVCH Trigger: ATGACATACTGACTGAGGCAATTCTGAAACACAAAT...CCCCACGAGAGACCTGGAGAATTTATCCCTTTCTGATTTGATTGCAAAAACGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061324.6 |
||
| CDS-3UTR CAA 90 bp | GTAGCATCTTTGTTACTTAAGAACAGATTTCTGTCACTTCGCATTACACTCCAGAATATGCAGCCGACATaGATTTTGATGATGTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: VASLLLKNRFLSLRITLQNMQPT*ILMMSI Trigger: GATGGACATCATCAAAATCAATGTCGGCTGCATATT...CTGGAGTGTAATGCGAAGTGACAGAAATCTGTTCTTAAGTAACAAAGATGCTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS-3UTR CAA 90 bp | TCAGAAAGTTGGATATCAAATGAAGTATCTGAGGTCCAAGTCACAATATCATGTGTGCACAAGAATCTCTaGGCGTATCATGAATCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SESWISNEVSEVQVTISCVHKNL*AYHESG Trigger: ACCTGATTCATGATACGCCAAGAGATTCTTGTGCAC...ACATGATATTGTGACTTGGACCTCAGATACTTCATTTGATATCCAACTTTCTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092674.14 |
||
| CDS-3UTR CAA 90 bp | TCAGAAAGTTGGATATCAAATGAAGTATCTGAGGTCCAAGTCACAATATCATGTAAAATAAGACTCCTTTaGAAGGCTGTCCTGCACACA | + |
|
Preference number: 5 (lower is better) Translates to: SESWISNEVSEVQVTISCKIRLL*KAVLHT Trigger: TGTGTGCAGGACAGCCTTCAAAAGGAGTCTTATTTT...ACATGATATTGTGACTTGGACCTCAGATACTTCATTTGATATCCAACTTTCTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092674.14 |
||
| CDS-3UTR CAA 90 bp | TCAGAAAGTTGGATATCAAATGAAGTATCTGAGGTCCAAGTCACAATATCATGTAGTCAAATGGCGTTATaGCTGCAAGAGGACTTATTT | + |
|
Preference number: 5 (lower is better) Translates to: SESWISNEVSEVQVTISCSQMAL*LQEDLF Trigger: AAATAAGTCCTCTTGCAGCAATAACGCCATTTGACT...ACATGATATTGTGACTTGGACCTCAGATACTTCATTTGATATCCAACTTTCTGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092674.14 |
||
| CDS-3UTR CAA 90 bp | ATGATCCTACAAAACCTTTACATTGCGATTAAAAAGCTTACAACAGTAGCCAAGATTTGTGTTTCAGAATaGCCTCAGTCAGTATGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: MILQNLYIAIKKLTTVAKICVSE*PQSVCH Trigger: ATGACATACTGACTGAGGCAATTCTGAAACACAAAT...CTTGGCTACTGTTGTAAGCTTTTTAATCGCAATGTAAAGGTTTTGTAGGATCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061324.6 ENSMUST00000092674.14 |
||
| CDS CCA 72 bp | GAAGCTCACTCTGCCCGCTGTCTGAGGGTGGCAGTCTaGCTGACAGCTGGCGTGCACAAGAATCTCTTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: EAHSARCLRVAV*LTAGVHKNLLA Trigger: CGCCAAGAGATTCTTGTGCACGCCAGCTGTCAGCCAGACTGCCACCCTCAGACAGCGGGCAGAGTGAGCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092674.14 |
||
| CDS GCA 72 bp | AGCTGTGTCACTCCAAGAGATCGGACCAAAAGGCCATaGTCTCGGGTCTGTCCTCCCGTCTCAAATCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SCVTPRDRTKRP*SRVCPPVSNPA Trigger: AGCTGGATTTGAGACGGGAGGACAGACCCGAGAGCATGGCCTTTTGGTCCGATCTCTTGGAGTGACACAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020153.10 ENSMUST00000218714.2 ENSMUST00000219915.2 |
||
| CDS CAA 72 bp | TCCAATTCCGCTTTCACGTCTATCTGCTGCCTCAGCTaGCCAGACTTTCTCACTGGTGTCGGAGTGGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SNSAFTSICCLS*PDFLTGVGVEP Trigger: GGGCTCCACTCCGACACCAGTGAGAAAGTCTGGCAAGCTGAGGCAGCAGATAGACGTGAAAGCGGAATTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS CAA 90 bp | TGCCGCTTTTCCAATTCCGCTTTCACGTCTATCTGCTGCCTCAGCTaGCCAGACTTTCTCACTGGTGTCGGAGTGGAGCCCAGCTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: CRFSNSAFTSICCLS*PDFLTGVGVEPSSS Trigger: AGAAGAGCTGGGCTCCACTCCGACACCAGTGAGAAAGTCTGGCAAGCTGAGGCAGCAGATAGACGTGAAAGCGGAATTGGAAAAGCGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS TCA 72 bp | CATCACCAGGAGGCCCTTTGTGAGGAGCGCGCACACTaGGTCCATTTTCCTCAGAAGTTAAGCCAGGCACTT | + |
|
Preference number: 6 (lower is better) Translates to: HHQEALCEERAH*VHFPQKLSQAL Trigger: AAGTGCCTGGCTTAACTTCTGAGGAAAATGGACTCAGTGTGCGCGCTCCTCACAAAGGGCCTCCTGGTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS GCA 72 bp | CCCTGCCGCTTTTCCAATTCCGCTTTCACGTCTATCTaGTGCCTCAGCTTGCCAGACTTTCTCACTGGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: PCRFSNSAFTSI*CLSLPDFLTGV Trigger: GACACCAGTGAGAAAGTCTGGCAAGCTGAGGCAGCAGATAGACGTGAAAGCGGAATTGGAAAAGCGGCAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS GCA 72 bp | CCAATGACCACTAAGTTGAGGAGCTGCTTCCCGCCCTaGCGCTTTTCCAATTCCGCTTTCACGTCTATCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PMTTKLRSCFPP*RFSNSAFTSIC Trigger: GCAGATAGACGTGAAAGCGGAATTGGAAAAGCGGCAGGGCGGGAAGCAGCTCCTCAACTTAGTGGTCATTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
||
| CDS GCA 72 bp | CCCAACCAAGGTAAGATTTACGTGATCGCCTGCTGCTaGCCAATCGACAGGCTCATCGTGCAGAGTGATTCC | + |
|
Preference number: 6 (lower is better) Translates to: PNQGKIYVIACC*PIDRLIVQSDS Trigger: GGAATCACTCTGCACGATGAGCCTGTCGATTGGGCAGCAGCAGGCGATCACGTAAATCTTACCTTGGTTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| CDS GCA 72 bp | GTCCATCCCAACCAAGGTAAGATTTACGTGATCGCCTaGTGCTGCCCAATCGACAGGCTCATCGTGCAGAGT | + |
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Preference number: 6 (lower is better) Translates to: VHPNQGKIYVIA*CCPIDRLIVQS Trigger: ACTCTGCACGATGAGCCTGTCGATTGGGCAGCAGCAGGCGATCACGTAAATCTTACCTTGGTTGGGATGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| CDS GCA 72 bp | TGCCGCTTTTCCAATTCCGCTTTCACGTCTATCTGCTaGCTCAGCTTGCCAGACTTTCTCACTGGTGTCGGA | + |
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Preference number: 6 (lower is better) Translates to: CRFSNSAFTSIC*LSLPDFLTGVG Trigger: TCCGACACCAGTGAGAAAGTCTGGCAAGCTGAGGCAGCAGATAGACGTGAAAGCGGAATTGGAAAAGCGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| CDS GCA 72 bp | CATCCCAACCAAGGTAAGATTTACGTGATCGCCTGCTaGTGCCCAATCGACAGGCTCATCGTGCAGAGTGAT | + |
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Preference number: 6 (lower is better) Translates to: HPNQGKIYVIAC*CPIDRLIVQSD Trigger: ATCACTCTGCACGATGAGCCTGTCGATTGGGCAGCAGCAGGCGATCACGTAAATCTTACCTTGGTTGGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| CDS CCA 72 bp | ACTGGTCTTTGTGTCTGCAGCTCTACCAAGGCGTTCTaGCCCTTGGTCAGCAACTTGGGCTTCTTCTTTGTG | + |
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Preference number: 6 (lower is better) Translates to: TGLCVCSSTKAF*PLVSNLGFFFV Trigger: CACAAAGAAGAAGCCCAAGTTGCTGACCAAGGGCCAGAACGCCTTGGTAGAGCTGCAGACACAAAGACCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| CDS CAA 90 bp | CTGAGGGTGGCAGTCTGGCTGACAGCTGGCGTGCACAAGAATCTCTaGGCGTATCATGAATCAGGTGAGCTAGAGCCAGCTCTTTTGTTA | + |
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Preference number: 6 (lower is better) Translates to: LRVAVWLTAGVHKNL*AYHESGELEPALLL Trigger: TAACAAAAGAGCTGGCTCTAGCTCACCTGATTCATGATACGCCAAGAGATTCTTGTGCACGCCAGCTGTCAGCCAGACTGCCACCCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092674.14 |
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| CDS TCA 72 bp | TTGATGATGTCCATCCCAACCAAGGTAAGATTTACGTaGTCGCCTGCTGCTGCCCAATCGACAGGCTCATCG | + |
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Preference number: 6 (lower is better) Translates to: LMMSIPTKVRFT*SPAAAQSTGSS Trigger: CGATGAGCCTGTCGATTGGGCAGCAGCAGGCGATCACGTAAATCTTACCTTGGTTGGGATGGACATCATCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| CDS CCA 72 bp | CAGCTCCTTGAAGTCTTTGTAGAGCTCAAGAGCCACTaGTCTTTGTGTCTGCAGCTCTACCAAGGCGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: QLLEVFVELKSH*SLCLQLYQGVL Trigger: CAGAACGCCTTGGTAGAGCTGCAGACACAAAGACCAGTGGCTCTTGAGCTCTACAAAGACTTCAAGGAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| CDS CAA 72 bp | TCGTGCAGAGTGATTCCTTTAGCAGTACAGGTTTCATaGGGTGGCATGGCTAACAGTCGGTCACCAGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: SCRVIPLAVQVS*GGMANSRSPVW Trigger: CCAGACTGGTGACCGACTGTTAGCCATGCCACCCAATGAAACCTGTACTGCTAAAGGAATCACTCTGCACGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| CDS CAA 72 bp | CTTTGTGTCTGCAGCTCTACCAAGGCGTTCTGGCCCTaGGTCAGCAACTTGGGCTTCTTCTTTGTGACTTCA | + |
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Preference number: 6 (lower is better) Translates to: LCVCSSTKAFWP*VSNLGFFFVTS Trigger: TGAAGTCACAAAGAAGAAGCCCAAGTTGCTGACCAAGGGCCAGAACGCCTTGGTAGAGCTGCAGACACAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| CDS TCA 72 bp | TCTGCTCCAATAAGCACATCCCTTTGTACCACGTCGTaGGGTCACTGGACTGTGACCTTGCGGTTAAATTCT | + |
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Preference number: 6 (lower is better) Translates to: SAPISTSLCTTS*GHWTVTLRLNS Trigger: AGAATTTAACCGCAAGGTCACAGTCCAGTGACCTCACGACGTGGTACAAAGGGATGTGCTTATTGGAGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020153.10 ENSMUST00000218714.2 ENSMUST00000219915.2 |
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| CDS CAA 72 bp | AGCACAGGAAACCCTTTAGTGATCGGAACTTCAATATaGAAGACGAGGATTCGGGCTCTGAAGCGGGTGCAA | + |
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Preference number: 6 (lower is better) Translates to: STGNPLVIGTSI*KTRIRALKRVQ Trigger: TTGCACCCGCTTCAGAGCCCGAATCCTCGTCTTCAATATTGAAGTTCCGATCACTAAAGGGTTTCCTGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| CDS TCA 72 bp | CTTAAGCTTGCTGAGACGTTCTGCACGGGAGTACTTTaGAAATCAGGTAGTGAGCTGCTCCGAATTCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: LKLAETFCTGVL*KSGSELLRIPK Trigger: TTTGGGAATTCGGAGCAGCTCACTACCTGATTTTCAAAGTACTCCCGTGCAGAACGTCTCAGCAAGCTTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092674.14 |
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| CDS TCA 72 bp | TTCTCCAGTTTCATCCAAGACCCACGCATATGCAAATaGAGCCTTGCCAGCCTTTTTAGATTCTTGCTCATA | + |
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Preference number: 6 (lower is better) Translates to: FSSFIQDPRICK*SLASLFRFLLI Trigger: TATGAGCAAGAATCTAAAAAGGCTGGCAAGGCTTCATTTGCATATGCGTGGGTCTTGGATGAAACTGGAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| CDS TCA 72 bp | ATCTTTCTTGTTGCCAATTTACCTGATCCATCTTATTaGCAGCCACAGCAAGCTGTGTCACTCCAAGAGATC | + |
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Preference number: 6 (lower is better) Translates to: IFLVANLPDPSY*QPQQAVSLQEI Trigger: GATCTCTTGGAGTGACACAGCTTGCTGTGGCTGTCAATAAGATGGATCAGGTAAATTGGCAACAAGAAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020153.10 ENSMUST00000218714.2 ENSMUST00000219915.2 |
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| CDS GCA 72 bp | TCAGAAGTTAAGCCAGGCACTTCAAATCCCATGGTCTaGTTCTTCCCGGATACAGTCATTTTAGCAACTTTT | + |
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Preference number: 6 (lower is better) Translates to: SEVKPGTSNPMV*FFPDTVILATF Trigger: AAAAGTTGCTAAAATGACTGTATCCGGGAAGAAGCAGACCATGGGATTTGAAGTGCCTGGCTTAACTTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| CDS CAA 72 bp | GTTTCATCCAAGACCCACGCATATGCAAATGAAGCCTaGCCAGCCTTTTTAGATTCTTGCTCATACTTATGC | + |
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Preference number: 6 (lower is better) Translates to: VSSKTHAYANEA*PAFLDSCSYLC Trigger: GCATAAGTATGAGCAAGAATCTAAAAAGGCTGGCAAGGCTTCATTTGCATATGCGTGGGTCTTGGATGAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| CDS CCA 72 bp | GCTGCTCCTGTGATCATGTTTGGAATGAAATCCTTATaGCCTGGAGCATCCATTAAGGTAATAACTTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: AAPVIMFGMKSL*PGASIKVITLV Trigger: AACCAAAGTTATTACCTTAATGGATGCTCCAGGCCATAAGGATTTCATTCCAAACATGATCACAGGAGCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| CDS CAA 90 bp | TCTTCTCCAGTTTCATCCAAGACCCACGCATATGCAAATGAAGCCTaGCCAGCCTTTTTAGATTCTTGCTCATACTTATGCATAGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: SSPVSSKTHAYANEA*PAFLDSCSYLCIVL Trigger: AAGAACTATGCATAAGTATGAGCAAGAATCTAAAAAGGCTGGCAAGGCTTCATTTGCATATGCGTGGGTCTTGGATGAAACTGGAGAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| CDS CAA 90 bp | GGAATGAAATCCTTATGGCCTGGAGCATCCATTAAGGTAATAACTTaGGTTGTGGTTTCAAACTTCGTCATTCCGACGTCCATTGTTACT | + |
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Preference number: 6 (lower is better) Translates to: GMKSLWPGASIKVIT*VVVSNFVIPTSIVT Trigger: AGTAACAATGGACGTCGGAATGACGAAGTTTGAAACCACAACCAAAGTTATTACCTTAATGGATGCTCCAGGCCATAAGGATTTCATTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020153.10 ENSMUST00000219915.2 |
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| CDS CAA 90 bp | AAAACCTGCTTGCTTAAGAAAGTGCCCGAGTTTTCCAGTAATCTCTaGAAATCTTTCTTGTTGCCAATTTACCTGATCCATCTTATTGAC | + |
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Preference number: 6 (lower is better) Translates to: KTCLLKKVPEFSSNL*KSFLLPIYLIHLID Trigger: GTCAATAAGATGGATCAGGTAAATTGGCAACAAGAAAGATTTCAAGAGATTACTGGAAAACTCGGGCACTTTCTTAAGCAAGCAGGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020153.10 ENSMUST00000218714.2 ENSMUST00000219915.2 |
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