Pregenerated sensors for HBP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002996Ensembl transcript IDs: ENSMUST00000167458.9, ENSMUST00000172314.9, ENSMUST00000175686.8, ENSMUST00000176084.2, ENSMUST00000176103.8, ENSMUST00000176520.8, ENSMUST00000176643.8
Found 248 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGCACCTTGGCCTGGCTTGGGCCCCACTGGGAATCATGGAGCTGTaGTGCCCCCTGGTGCATCCACTCAGCACATGCCCATGGTATCTG | + |
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Preference number: 1 (lower is better) Translates to: LHLGLAWAPLGIMEL*CPLVHPLSTCPWYL Trigger: CAGATACCATGGGCATGTGCTGAGTGGATGCACCAGGGGGCAGCACAGCTCCATGATTCCCAGTGGGGCCCAAGCCAGGCCAAGGTGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR GCA 90 bp | CACCTTGGCCTGGCTTGGGCCCCACTGGGAATCATGGAGCTGTGCTaGCCCCTGGTGCATCCACTCAGCACATGCCCATGGTATCTGAAG | + |
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Preference number: 1 (lower is better) Translates to: HLGLAWAPLGIMELC*PLVHPLSTCPWYLK Trigger: CTTCAGATACCATGGGCATGTGCTGAGTGGATGCACCAGGGGGCAGCACAGCTCCATGATTCCCAGTGGGGCCCAAGCCAGGCCAAGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR GCA 90 bp | TCTCTTGGCACTGGCCAGACTAGAAGCAACTGTGTTTGGCAGAGATaGTGGGCCATGTGGTGGCTATTCATGGAAAGGCCAGCGTCTGCT | + |
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Preference number: 1 (lower is better) Translates to: SLGTGQTRSNCVWQR*WAMWWLFMERPASA Trigger: AGCAGACGCTGGCCTTTCCATGAATAGCCACCACATGGCCCAGCATCTCTGCCAAACACAGTTGCTTCTAGTCTGGCCAGTGCCAAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR GCA 90 bp | GGAGGGAGTAAAGTGCAAGTGGTGCACTGCAGTAAGTGCAAAGTCTaGCCCACCAGAGACACACTGACAGCACAGATGAGGGTATGTGGC | + |
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Preference number: 1 (lower is better) Translates to: GGSKVQVVHCSKCKV*PTRDTLTAQMRVCG Trigger: GCCACATACCCTCATCTGTGCTGTCAGTGTGTCTCTGGTGGGGCAGACTTTGCACTTACTGCAGTGCACCACTTGCACTTTACTCCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR GCA 90 bp | TCAGAAGCCGGAGGGAGTAAAGTGCAAGTGGTGCACTGCAGTAAGTaGAAAGTCTGCCCCACCAGAGACACACTGACAGCACAGATGAGG | + |
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Preference number: 1 (lower is better) Translates to: SEAGGSKVQVVHCSK*KVCPTRDTLTAQMR Trigger: CCTCATCTGTGCTGTCAGTGTGTCTCTGGTGGGGCAGACTTTGCACTTACTGCAGTGCACCACTTGCACTTTACTCCCTCCGGCTTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR GCA 90 bp | TGCTCTGTCTCAGAAGCCGGAGGGAGTAAAGTGCAAGTGGTGCACTaGAGTAAGTGCAAAGTCTGCCCCACCAGAGACACACTGACAGCA | + |
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Preference number: 1 (lower is better) Translates to: CSVSEAGGSKVQVVH*SKCKVCPTRDTLTA Trigger: TGCTGTCAGTGTGTCTCTGGTGGGGCAGACTTTGCACTTACTGCAGTGCACCACTTGCACTTTACTCCCTCCGGCTTCTGAGACAGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR CCA 90 bp | CTTGGCACTGGCCAGACTAGAAGCAACTGTGTTTGGCAGAGATGCTaGGCCATGTGGTGGCTATTCATGGAAAGGCCAGCGTCTGCTTCA | + |
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Preference number: 1 (lower is better) Translates to: LGTGQTRSNCVWQRC*AMWWLFMERPASAS Trigger: TGAAGCAGACGCTGGCCTTTCCATGAATAGCCACCACATGGCCCAGCATCTCTGCCAAACACAGTTGCTTCTAGTCTGGCCAGTGCCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR CCA 90 bp | GAAGTACTTGCTCTGTCTCAGAAGCCGGAGGGAGTAAAGTGCAAGTaGTGCACTGCAGTAAGTGCAAAGTCTGCCCCACCAGAGACACAC | + |
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Preference number: 1 (lower is better) Translates to: EVLALSQKPEGVKCK*CTAVSAKSAPPETH Trigger: GTGTGTCTCTGGTGGGGCAGACTTTGCACTTACTGCAGTGCACCACTTGCACTTTACTCCCTCCGGCTTCTGAGACAGAGCAAGTACTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR TCA 90 bp | CATCCACTCAGCACATGCCCATGGTATCTGAAGCAGGTGGCTCTTTaGGCTGAGACAATGACACCGACACCATCCACCTGCCATGTTATG | + |
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Preference number: 1 (lower is better) Translates to: HPLSTCPWYLKQVAL*AETMTPTPSTCHVM Trigger: CATAACATGGCAGGTGGATGGTGTCGGTGTCATTGTCTCAGCTCAAAGAGCCACCTGCTTCAGATACCATGGGCATGTGCTGAGTGGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR TCA 90 bp | ACTCAGCACATGCCCATGGTATCTGAAGCAGGTGGCTCTTTGAGCTaGGACAATGACACCGACACCATCCACCTGCCATGTTATGTTGTC | + |
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Preference number: 1 (lower is better) Translates to: TQHMPMVSEAGGSLS*DNDTDTIHLPCYVV Trigger: GACAACATAACATGGCAGGTGGATGGTGTCGGTGTCATTGTCTCAGCTCAAAGAGCCACCTGCTTCAGATACCATGGGCATGTGCTGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR TCA 90 bp | ATGAGAAGCCATGATTGTAGCTCAGAGCAAGAGCAGCAGGACTGCTaGAGTACTTGCTCTGTCTCAGAAGCCGGAGGGAGTAAAGTGCAA | + |
|
Preference number: 1 (lower is better) Translates to: MRSHDCSSEQEQQDC*STCSVSEAGGSKVQ Trigger: TTGCACTTTACTCCCTCCGGCTTCTGAGACAGAGCAAGTACTTCAGCAGTCCTGCTGCTCTTGCTCTGAGCTACAATCATGGCTTCTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR GCA 90 bp | GAGATGCTGGGCCATGTGGTGGCTATTCATGGAAAGGCCAGCGTCTaGTTCACTCCTGATATCGTGGGTACAATACAGATTAATAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: EMLGHVVAIHGKASV*FTPDIVGTIQINKQ Trigger: CTGCTTATTAATCTGTATTGTACCCACGATATCAGGAGTGAAGCAGACGCTGGCCTTTCCATGAATAGCCACCACATGGCCCAGCATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR GCA 90 bp | TTCTTGATGTTTTCTCTTAGGTTAAACATGGCGGGCAGTGTGAGGTaGGCTATGATTCAGTCTAGACTCCTTCCTCGCTTAAGTTTCAAC | + |
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Preference number: 1 (lower is better) Translates to: FLMFSLRLNMAGSVR*AMIQSRLLPRLSFN Trigger: GTTGAAACTTAAGCGAGGAAGGAGTCTAGACTGAATCATAGCGCACCTCACACTGCCCGCCATGTTTAACCTAAGAGAAAACATCAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
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| 3UTR CCA 90 bp | TGGCTATTCATGGAAAGGCCAGCGTCTGCTTCACTCCTGATATCGTaGGTACAATACAGATTAATAAGCAGTAAGGAGCTGATGTATAAA | + |
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Preference number: 1 (lower is better) Translates to: WLFMERPASASLLIS*VQYRLISSKELMYK Trigger: TTTATACATCAGCTCCTTACTGCTTATTAATCTGTATTGTACCCACGATATCAGGAGTGAAGCAGACGCTGGCCTTTCCATGAATAGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR TCA 90 bp | CAACAAACGACACTGAAGGAGTTTATTTTGCAGGCACAGTTACTGTaGACTGCCCTGACAAGTCAAGAGTTGCAGTCATTACTATTTTAT | + |
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Preference number: 1 (lower is better) Translates to: QQTTLKEFILQAQLL*TALTSQELQSLLFY Trigger: ATAAAATAGTAATGACTGCAACTCTTGACTTGTCAGGGCAGTTCACAGTAACTGTGCCTGCAAAATAAACTCCTTCAGTGTCGTTTGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
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| 3UTR CCA 90 bp | CTCCTTCCTCGCTTAAGTTTCAACCTCATTAATGTATATGCCAACTaGCCTAATAGCTTTCTATATGTCTACATTCTGCCCCTAAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: LLPRLSFNLINVYAN*PNSFLYVYILPLRK Trigger: TTTTCTTAGGGGCAGAATGTAGACATATAGAAAGCTATTAGGCCAGTTGGCATATACATTAATGAGGTTGAAACTTAAGCGAGGAAGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
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| 3UTR-3UTR CCA 90 bp | AGTAAAGTGCAAGTGGTGCACTGCAGTAAGTGCAAAGTCTGCCCCACCAGAGACCACCTTGGCCTGGCTTaGGCCCCACTGGGAATCATG | + |
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Preference number: 2 (lower is better) Translates to: SKVQVVHCSKCKVCPTRDHLGLA*APLGIM Trigger: CATGATTCCCAGTGGGGCCCAAGCCAGGCCAAGGTG...GTCTCTGGTGGGGCAGACTTTGCACTTACTGCAGTGCACCACTTGCACTTTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR-3UTR TCA 90 bp | AGTAAAGTGCAAGTGGTGCACTGCAGTAAGTGCAAAGTCTGCCCCACCAGAGACATGAGGGTATGTGGCTaGGGAGACAGGAACGCGGTC | + |
|
Preference number: 2 (lower is better) Translates to: SKVQVVHCSKCKVCPTRDMRVCG*GDRNAV Trigger: GACCGCGTTCCTGTCTCCTCAGCCACATACCCTCAT...GTCTCTGGTGGGGCAGACTTTGCACTTACTGCAGTGCACCACTTGCACTTTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR-3UTR GCA 90 bp | GTGCAAGTGGTGCACTGCAGTAAGTGCAAAGTCTGCCCCACCAGAGACACACTGATGCTATTAACTGACTaGACCTTGGCCTGGCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: VQVVHCSKCKVCPTRDTLMLLTD*TLAWLG Trigger: CCCAAGCCAGGCCAAGGTGCAGTCAGTTAATAGCAT...CAGTGTGTCTCTGGTGGGGCAGACTTTGCACTTACTGCAGTGCACCACTTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR-3UTR CCA 90 bp | TGCACCTTGGCCTGGCTTGGGCCCCACTGGGAATCATGGAGCTGTGCTGCCCCCTCACTCCTGATATCGTaGGTACAATACAGATTAATA | + |
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Preference number: 2 (lower is better) Translates to: CTLAWLGPHWESWSCAAPSLLIS*VQYRLI Trigger: TATTAATCTGTATTGTACCCACGATATCAGGAGTGA...GGGGGCAGCACAGCTCCATGATTCCCAGTGGGGCCCAAGCCAGGCCAAGGTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR-3UTR CCA 90 bp | AGACACACTGACAGCACAGATGAGGGTATGTGGCTGAGGAGACAGGAACGCGGTAGAAGCAACTGTGTTTaGCAGAGATGCTGGGCCATG | + |
|
Preference number: 2 (lower is better) Translates to: RHTDSTDEGMWLRRQERGRSNCV*QRCWAM Trigger: CATGGCCCAGCATCTCTGCCAAACACAGTTGCTTCT...ACCGCGTTCCTGTCTCCTCAGCCACATACCCTCATCTGTGCTGTCAGTGTGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR-3UTR CCA 90 bp | GCCATGATTGTAGCTCAGAGCAAGAGCAGCAGGACTGCTGAAGTACTTGCTCTGTGTGGTGGCTATTCATaGAAAGGCCAGCGTCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: AMIVAQSKSSRTAEVLALCGGYS*KGQRLL Trigger: AAGCAGACGCTGGCCTTTCCATGAATAGCCACCACA...CAGAGCAAGTACTTCAGCAGTCCTGCTGCTCTTGCTCTGAGCTACAATCATGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR-3UTR GCA 90 bp | AGACACACTGACAGCACAGATGAGGGTATGTGGCTGAGGAGACAGGAACGCGGTCAGAGTCAGTACTTATaGAGATGCAGACTTACAAAC | + |
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Preference number: 2 (lower is better) Translates to: RHTDSTDEGMWLRRQERGQSQYL*RCRLTN Trigger: GTTTGTAAGTCTGCATCTGCATAAGTACTGACTCTG...ACCGCGTTCCTGTCTCCTCAGCCACATACCCTCATCTGTGCTGTCAGTGTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR-3UTR CCA 90 bp | GGAGGGAGTAAAGTGCAAGTGGTGCACTGCAGTAAGTGCAAAGTCTGCCCCACCGCTCCCAGCATTTTATaGTCACACAAATGTAGACAA | + |
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Preference number: 2 (lower is better) Translates to: GGSKVQVVHCSKCKVCPTAPSIL*SHKCRQ Trigger: TTGTCTACATTTGTGTGACCATAAAATGCTGGGAGC...GGTGGGGCAGACTTTGCACTTACTGCAGTGCACCACTTGCACTTTACTCCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR-3UTR GCA 90 bp | TGGAGAAATGGCTCAGCAGTTAAAAGCACTGACTGCTCTGCTCTTCCAGAGGACACAGTTACTGTGAACTaGCCTGACAAGTCAAGAGTT | + |
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Preference number: 2 (lower is better) Translates to: WRNGSAVKSTDCSALPEDTVTVN*PDKSRV Trigger: AACTCTTGACTTGTCAGGGCAGTTCACAGTAACTGT...GTCCTCTGGAAGAGCAGAGCAGTCAGTGCTTTTAACTGCTGAGCCATTTCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
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| 3UTR-3UTR GCA 90 bp | AGTAAAGTGCAAGTGGTGCACTGCAGTAAGTGCAAAGTCTGCCCCACCAGAGACCAGTACTTATGCAGATaGAGACTTACAAACACAAGC | + |
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Preference number: 2 (lower is better) Translates to: SKVQVVHCSKCKVCPTRDQYLCR*RLTNTS Trigger: GCTTGTGTTTGTAAGTCTGCATCTGCATAAGTACTG...GTCTCTGGTGGGGCAGACTTTGCACTTACTGCAGTGCACCACTTGCACTTTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR-3UTR GCA 90 bp | AGTAAAGTGCAAGTGGTGCACTGCAGTAAGTGCAAAGTCTGCCCCACCAGAGACCATTACAAAACTCAATaGTCCCAGCATTTTATGGTC | + |
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Preference number: 2 (lower is better) Translates to: SKVQVVHCSKCKVCPTRDHYKTQ*SQHFMV Trigger: GACCATAAAATGCTGGGAGCATTGAGTTTTGTAATG...GTCTCTGGTGGGGCAGACTTTGCACTTACTGCAGTGCACCACTTGCACTTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR-3UTR TCA 90 bp | TCTTTGAGGAGCTGGAGAAATGGCTCAGCAGTTAAAAGCACTGACTGCTCTGCTATCAACAAACGACACTaGAGGAGTTTATTTTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: SLRSWRNGSAVKSTDCSAINKRH*RSLFCR Trigger: CCTGCAAAATAAACTCCTTCAGTGTCGTTTGTTGAT...AGCAGAGCAGTCAGTGCTTTTAACTGCTGAGCCATTTCTCCAGCTCCTCAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
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| 3UTR-3UTR GCA 90 bp | CAAAACTCTCACTTGGTAAGTAACATGAGAAGCCATGATTGTAGCTCAGAGCAACCGACACCATCCACCTaGCATGTTATGTTGTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: QNSHLVSNMRSHDCSSEQPTPST*HVMLSL Trigger: AAGAGACAACATAACATGGCAGGTGGATGGTGTCGG...TTGCTCTGAGCTACAATCATGGCTTCTCATGTTACTTACCAAGTGAGAGTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR-3UTR TCA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCTGCCATCATAAACTGTaGCATGAACATAGATGCATT | + |
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Preference number: 2 (lower is better) Translates to: NRACYFFWGFPFFDCFVSCHHKL*HEHRCI Trigger: AATGCATCTATGTTCATGTCACAGTTTATGATGGCA...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
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| 3UTR-3UTR CCA 90 bp | AAACCCAAACTGGTTTTTGATTTGGAAAAAGGTCCATTTGACTCATTTCCCGTTACTTCTTTGAGGAGCTaGAGAAATGGCTCAGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: KPKLVFDLEKGPFDSFPVTSLRS*RNGSAV Trigger: AACTGCTGAGCCATTTCTCCAGCTCCTCAAAGAAGT...AACGGGAAATGAGTCAAATGGACCTTTTTCCAAATCAAAAACCAGTTTGGGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
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| 3UTR-3UTR TCA 90 bp | AGGACAAGGCTATTCTGTACAAACACATCAACTCTTAAAGATGCACTTGGAATGTTAGAATTACTTCTTTaGGGAGCTGGAGAAATGGCT | + |
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Preference number: 2 (lower is better) Translates to: RTRLFCTNTSTLKDALGMLELLL*GAGEMA Trigger: AGCCATTTCTCCAGCTCCTCAAAGAAGTAATTCTAA...CATTCCAAGTGCATCTTTAAGAGTTGATGTGTTTGTACAGAATAGCCTTGTCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
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| 3UTR GCA 72 bp | CTGGCTTGGGCCCCACTGGGAATCATGGAGCTGTGCTaGCCCCTGGTGCATCCACTCAGCACATGCCCATGG | + |
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Preference number: 3 (lower is better) Translates to: LAWAPLGIMELC*PLVHPLSTCPW Trigger: CCATGGGCATGTGCTGAGTGGATGCACCAGGGGGCAGCACAGCTCCATGATTCCCAGTGGGGCCCAAGCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR-3UTR CAA 90 bp | GTAGCTCAGAGCAAGAGCAGCAGGACTGCTGAAGTACTTGCTCTGTCTCAGAAGTTAACTGACTGCACCTaGGCCTGGCTTGGGCCCCAC | + |
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Preference number: 3 (lower is better) Translates to: VAQSKSSRTAEVLALSQKLTDCT*AWLGPH Trigger: GTGGGGCCCAAGCCAGGCCAAGGTGCAGTCAGTTAA...CTTCTGAGACAGAGCAAGTACTTCAGCAGTCCTGCTGCTCTTGCTCTGAGCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR GCA 72 bp | CTGTCTCAGAAGCCGGAGGGAGTAAAGTGCAAGTGGTaGACTGCAGTAAGTGCAAAGTCTGCCCCACCAGAG | + |
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Preference number: 3 (lower is better) Translates to: LSQKPEGVKCKW*TAVSAKSAPPE Trigger: CTCTGGTGGGGCAGACTTTGCACTTACTGCAGTGCACCACTTGCACTTTACTCCCTCCGGCTTCTGAGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR CCA 72 bp | GGCCAGACTAGAAGCAACTGTGTTTGGCAGAGATGCTaGGCCATGTGGTGGCTATTCATGGAAAGGCCAGCG | + |
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Preference number: 3 (lower is better) Translates to: GQTRSNCVWQRC*AMWWLFMERPA Trigger: CGCTGGCCTTTCCATGAATAGCCACCACATGGCCCAGCATCTCTGCCAAACACAGTTGCTTCTAGTCTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR CCA 72 bp | GCTCTGTCTCAGAAGCCGGAGGGAGTAAAGTGCAAGTaGTGCACTGCAGTAAGTGCAAAGTCTGCCCCACCA | + |
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Preference number: 3 (lower is better) Translates to: ALSQKPEGVKCK*CTAVSAKSAPP Trigger: TGGTGGGGCAGACTTTGCACTTACTGCAGTGCACCACTTGCACTTTACTCCCTCCGGCTTCTGAGACAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR TCA 72 bp | AGCACATGCCCATGGTATCTGAAGCAGGTGGCTCTTTaGGCTGAGACAATGACACCGACACCATCCACCTGC | + |
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Preference number: 3 (lower is better) Translates to: STCPWYLKQVAL*AETMTPTPSTC Trigger: GCAGGTGGATGGTGTCGGTGTCATTGTCTCAGCTCAAAGAGCCACCTGCTTCAGATACCATGGGCATGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR GCA 72 bp | GGAGGGAGTAAAGTGCAAGTGGTGCACTGCAGTAAGTaGAAAGTCTGCCCCACCAGAGACACACTGACAGCA | + |
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Preference number: 3 (lower is better) Translates to: GGSKVQVVHCSK*KVCPTRDTLTA Trigger: TGCTGTCAGTGTGTCTCTGGTGGGGCAGACTTTGCACTTACTGCAGTGCACCACTTGCACTTTACTCCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR GCA 72 bp | TCAGAAGCCGGAGGGAGTAAAGTGCAAGTGGTGCACTaGAGTAAGTGCAAAGTCTGCCCCACCAGAGACACA | + |
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Preference number: 3 (lower is better) Translates to: SEAGGSKVQVVH*SKCKVCPTRDT Trigger: TGTGTCTCTGGTGGGGCAGACTTTGCACTTACTGCAGTGCACCACTTGCACTTTACTCCCTCCGGCTTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR GCA 72 bp | CACTGGGCGGTCTCACTCCCTACCCAGAGGGCAAGGTaGCATTTAAATAGGAATGCAAGTAGAGCGTTCCTC | + |
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Preference number: 3 (lower is better) Translates to: HWAVSLPTQRAR*HLNRNASRAFL Trigger: GAGGAACGCTCTACTTGCATTCCTATTTAAATGGCACCTTGCCCTCTGGGTAGGGAGTGAGACCGCCCAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176103.8 |
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| 3UTR CCA 72 bp | CACCAGAGACACACTGACAGCACAGATGAGGGTATGTaGCTGAGGAGACAGGAACGCGGTCAAACACAATGG | + |
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Preference number: 3 (lower is better) Translates to: HQRHTDSTDEGM*LRRQERGQTQW Trigger: CCATTGTGTTTGACCGCGTTCCTGTCTCCTCAGCCACATACCCTCATCTGTGCTGTCAGTGTGTCTCTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR TCA 72 bp | ATGCCCATGGTATCTGAAGCAGGTGGCTCTTTGAGCTaGGACAATGACACCGACACCATCCACCTGCCATGT | + |
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Preference number: 3 (lower is better) Translates to: MPMVSEAGGSLS*DNDTDTIHLPC Trigger: ACATGGCAGGTGGATGGTGTCGGTGTCATTGTCTCAGCTCAAAGAGCCACCTGCTTCAGATACCATGGGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR TCA 72 bp | AGAGACACACTGACAGCACAGATGAGGGTATGTGGCTaGGGAGACAGGAACGCGGTCAAACACAATGGTGTC | + |
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Preference number: 3 (lower is better) Translates to: RDTLTAQMRVCG*GDRNAVKHNGV Trigger: GACACCATTGTGTTTGACCGCGTTCCTGTCTCCTCAGCCACATACCCTCATCTGTGCTGTCAGTGTGTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR TCA 72 bp | CATGATTGTAGCTCAGAGCAAGAGCAGCAGGACTGCTaGAGTACTTGCTCTGTCTCAGAAGCCGGAGGGAGT | + |
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Preference number: 3 (lower is better) Translates to: HDCSSEQEQQDC*STCSVSEAGGS Trigger: ACTCCCTCCGGCTTCTGAGACAGAGCAAGTACTTCAGCAGTCCTGCTGCTCTTGCTCTGAGCTACAATCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR GCA 72 bp | ACTGGCCAGACTAGAAGCAACTGTGTTTGGCAGAGATaGTGGGCCATGTGGTGGCTATTCATGGAAAGGCCA | + |
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Preference number: 3 (lower is better) Translates to: TGQTRSNCVWQR*WAMWWLFMERP Trigger: TGGCCTTTCCATGAATAGCCACCACATGGCCCAGCATCTCTGCCAAACACAGTTGCTTCTAGTCTGGCCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR GCA 72 bp | AAAGTGCAAGTGGTGCACTGCAGTAAGTGCAAAGTCTaGCCCACCAGAGACACACTGACAGCACAGATGAGG | + |
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Preference number: 3 (lower is better) Translates to: KVQVVHCSKCKV*PTRDTLTAQMR Trigger: CCTCATCTGTGCTGTCAGTGTGTCTCTGGTGGGGCAGACTTTGCACTTACTGCAGTGCACCACTTGCACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| 3UTR CCA 72 bp | AGAAGCAACTGTGTTTGGCAGAGATGCTGGGCCATGTaGTGGCTATTCATGGAAAGGCCAGCGTCTGCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: RSNCVWQRCWAM*WLFMERPASAS Trigger: TGAAGCAGACGCTGGCCTTTCCATGAATAGCCACCACATGGCCCAGCATCTCTGCCAAACACAGTTGCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| 3UTR GCA 72 bp | GGCCATGTGGTGGCTATTCATGGAAAGGCCAGCGTCTaGTTCACTCCTGATATCGTGGGTACAATACAGATT | + |
|
Preference number: 3 (lower is better) Translates to: GHVVAIHGKASV*FTPDIVGTIQI Trigger: AATCTGTATTGTACCCACGATATCAGGAGTGAAGCAGACGCTGGCCTTTCCATGAATAGCCACCACATGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| 3UTR GCA 72 bp | TTTTCTCTTAGGTTAAACATGGCGGGCAGTGTGAGGTaGGCTATGATTCAGTCTAGACTCCTTCCTCGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: FSLRLNMAGSVR*AMIQSRLLPRL Trigger: TAAGCGAGGAAGGAGTCTAGACTGAATCATAGCGCACCTCACACTGCCCGCCATGTTTAACCTAAGAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| 3UTR CCA 72 bp | AGCAGTCTCAGTCCCCCAGAGTTAGAATGTTTCAAATaGGGTGCTGATGCATTCTTGATGTTTTCTCTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: SSLSPPELECFK*GADAFLMFSLR Trigger: CCTAAGAGAAAACATCAAGAATGCATCAGCACCCCATTTGAAACATTCTAACTCTGGGGGACTGAGACTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| 3UTR TCA 72 bp | ACACTGAAGGAGTTTATTTTGCAGGCACAGTTACTGTaGACTGCCCTGACAAGTCAAGAGTTGCAGTCATTA | + |
|
Preference number: 3 (lower is better) Translates to: TLKEFILQAQLL*TALTSQELQSL Trigger: TAATGACTGCAACTCTTGACTTGTCAGGGCAGTTCACAGTAACTGTGCCTGCAAAATAAACTCCTTCAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| 3UTR TCA 72 bp | TTTGACTGCTTCGTATCCTTTTGCCATCATAAACTGTaGCATGAACATAGATGCATTTGTCTCATGAGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: FDCFVSFCHHKL*HEHRCICLMSP Trigger: TGGACTCATGAGACAAATGCATCTATGTTCATGTCACAGTTTATGATGGCAAAAGGATACGAAGCAGTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
||
| 3UTR CCA 72 bp | CGCTTAAGTTTCAACCTCATTAATGTATATGCCAACTaGCCTAATAGCTTTCTATATGTCTACATTCTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: RLSFNLINVYAN*PNSFLYVYILP Trigger: GGGCAGAATGTAGACATATAGAAAGCTATTAGGCCAGTTGGCATATACATTAATGAGGTTGAAACTTAAGCG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| 3UTR-3UTR CAA 90 bp | AAACCCAAACTGGTTTTTGATTTGGAAAAAGGTCCATTTGACTCATTTCCCGTTCTCTTAAAGATGCACTaGGAATGCAAAGCTTCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: KPKLVFDLEKGPFDSFPVLLKMH*ECKASF Trigger: GAAAGAAGCTTTGCATTCCAAGTGCATCTTTAAGAG...AACGGGAAATGAGTCAAATGGACCTTTTTCCAAATCAAAAACCAGTTTGGGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| CDS-3UTR TCA 90 bp | TGCACCTTGGCCTGGCTTGGGCCCCACTGGGAATCATGGAGCTGTGCTGCCCCCGCTTGCACTCTACAGTaGGCAAGCCATCTTCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: CTLAWLGPHWESWSCAAPACTLQ*ASHLLL Trigger: CAGTAGAAGATGGCTTGCTCACTGTAGAGTGCAAGC...GGGGGCAGCACAGCTCCATGATTCCCAGTGGGGCCCAAGCCAGGCCAAGGTGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR CCA 90 bp | TGCACCTTGGCCTGGCTTGGGCCCCACTGGGAATCATGGAGCTGTGCTGCCCCCACAGTCCCTGAGCTGTaGCTTTTGACAGCTTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CTLAWLGPHWESWSCAAPTVPEL*LLTALA Trigger: TGCTAAAGCTGTCAAAAGCCACAGCTCAGGGACTGT...GGGGGCAGCACAGCTCCATGATTCCCAGTGGGGCCCAAGCCAGGCCAAGGTGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR TCA 90 bp | AGACACACTGACAGCACAGATGAGGGTATGTGGCTGAGGAGACAGGAACGCGGTTCCTTCCAGTGGTCATaGGGGAAGGCTGGCCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: RHTDSTDEGMWLRRQERGSFQWS*GKAGPL Trigger: AAGTGGGCCAGCCTTCCCTCATGACCACTGGAAGGA...ACCGCGTTCCTGTCTCCTCAGCCACATACCCTCATCTGTGCTGTCAGTGTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR TCA 90 bp | GGAGGGAGTAAAGTGCAAGTGGTGCACTGCAGTAAGTGCAAAGTCTGCCCCACCAGAGATGCACGGCGCTaGCGAGCCATACTACTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GGSKVQVVHCSKCKVCPTRDARR*RAILLK Trigger: TTTGAGTAGTATGGCTCGTCAGCGCCGTGCATCTCT...GGTGGGGCAGACTTTGCACTTACTGCAGTGCACCACTTGCACTTTACTCCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR TCA 90 bp | GGAGGGAGTAAAGTGCAAGTGGTGCACTGCAGTAAGTGCAAAGTCTGCCCCACCGATCCCGAAAACTCTTaGCCAGTACCAGGTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GGSKVQVVHCSKCKVCPTDPENS*PVPGPP Trigger: AGGAGGACCTGGTACTGGTCAAGAGTTTTCGGGATC...GGTGGGGCAGACTTTGCACTTACTGCAGTGCACCACTTGCACTTTACTCCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR CCA 90 bp | GTGCAAGTGGTGCACTGCAGTAAGTGCAAAGTCTGCCCCACCAGAGACACACTGAGCAGTGCCAAATGGTaGATGGCCAGGAATTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: VQVVHCSKCKVCPTRDTLSSAKW*MARNCT Trigger: GGTGCAATTCCTGGCCATCCACCATTTGGCACTGCT...CAGTGTGTCTCTGGTGGGGCAGACTTTGCACTTACTGCAGTGCACCACTTGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR GCA 90 bp | AGTAAAGTGCAAGTGGTGCACTGCAGTAAGTGCAAAGTCTGCCCCACCAGAGACTCCACAAGACAGAGATaGACGGCGCTGACGAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SKVQVVHCSKCKVCPTRDSTRQR*TALTSH Trigger: ATGGCTCGTCAGCGCCGTGCATCTCTGTCTTGTGGA...GTCTCTGGTGGGGCAGACTTTGCACTTACTGCAGTGCACCACTTGCACTTTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| 3UTR CAA 72 bp | CACCGACACCATCCACCTGCCATGTTATGTTGTCTCTaGGCACTGGCCAGACTAGAAGCAACTGTGTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HRHHPPAMLCCL*ALARLEATVFG Trigger: GCCAAACACAGTTGCTTCTAGTCTGGCCAGTGCCAAGAGACAACATAACATGGCAGGTGGATGGTGTCGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR TCA 90 bp | GTAAGTAACATGAGAAGCCATGATTGTAGCTCAGAGCAAGAGCAGCAGGACTGCGGCACTCACAGTCCCTaGGCTGTGGCTTTTGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: VSNMRSHDCSSEQEQQDCGTHSP*AVAFDS Trigger: GCTGTCAAAAGCCACAGCTCAGGGACTGTGAGTGCC...GCAGTCCTGCTGCTCTTGCTCTGAGCTACAATCATGGCTTCTCATGTTACTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR CCA 90 bp | GTAGCTCAGAGCAAGAGCAGCAGGACTGCTGAAGTACTTGCTCTGTCTCAGAAGTCCCACACCATGTTATaGTGCTCCGACAAACCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: VAQSKSSRTAEVLALSQKSHTML*CSDKPV Trigger: GACGGGTTTGTCGGAGCACCATAACATGGTGTGGGA...CTTCTGAGACAGAGCAAGTACTTCAGCAGTCCTGCTGCTCTTGCTCTGAGCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR CCA 90 bp | AGTAAAGTGCAAGTGGTGCACTGCAGTAAGTGCAAAGTCTGCCCCACCAGAGACAGAAGAGGACACTGGTaGTGGGCGTGCATAGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: SKVQVVHCSKCKVCPTRDRRGHW*WACIGM Trigger: CATTCCTATGCACGCCCACCACCAGTGTCCTCTTCT...GTCTCTGGTGGGGCAGACTTTGCACTTACTGCAGTGCACCACTTGCACTTTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR TCA 90 bp | TGGAGAAATGGCTCAGCAGTTAAAAGCACTGACTGCTCTGCTCTTCCAGAGGACGATCCCGAAAACTCTTaGCCAGTACCAGGTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WRNGSAVKSTDCSALPEDDPENS*PVPGPP Trigger: AGGAGGACCTGGTACTGGTCAAGAGTTTTCGGGATC...GTCCTCTGGAAGAGCAGAGCAGTCAGTGCTTTTAACTGCTGAGCCATTTCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| CDS-3UTR GCA 90 bp | TGGAGAAATGGCTCAGCAGTTAAAAGCACTGACTGCTCTGCTCTTCCAGAGGACGTCACTCATCCCTGGTaGTCTCTTGTCCATCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: WRNGSAVKSTDCSALPEDVTHPW*SLVHHQ Trigger: CTGGTGATGGACAAGAGAGCACCAGGGATGAGTGAC...GTCCTCTGGAAGAGCAGAGCAGTCAGTGCTTTTAACTGCTGAGCCATTTCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| CDS-3UTR GCA 90 bp | GTAGCTCAGAGCAAGAGCAGCAGGACTGCTGAAGTACTTGCTCTGTCTCAGAAGCCTTTCAGAAAGCAGTaGCAAATGGTGGATGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VAQSKSSRTAEVLALSQKPFRKQ*QMVDGQ Trigger: CTGGCCATCCACCATTTGGCACTGCTTTCTGAAAGG...CTTCTGAGACAGAGCAAGTACTTCAGCAGTCCTGCTGCTCTTGCTCTGAGCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR CCA 90 bp | ACCTGCCATGTTATGTTGTCTCTTGGCACTGGCCAGACTAGAAGCAACTGTGTTGTGCCAAATGGTGGATaGCCAGGAATTGCACCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TCHVMLSLGTGQTRSNCVVPNGG*PGIAPA Trigger: GGCTGGTGCAATTCCTGGCCATCCACCATTTGGCAC...AACACAGTTGCTTCTAGTCTGGCCAGTGCCAAGAGACAACATAACATGGCAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR CCA 90 bp | TGGAGAAATGGCTCAGCAGTTAAAAGCACTGACTGCTCTGCTCTTCCAGAGGACAGCAGTGCCAAATGGTaGATGGCCAGGAATTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: WRNGSAVKSTDCSALPEDSSAKW*MARNCT Trigger: GGTGCAATTCCTGGCCATCCACCATTTGGCACTGCT...GTCCTCTGGAAGAGCAGAGCAGTCAGTGCTTTTAACTGCTGAGCCATTTCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| CDS-3UTR TCA 90 bp | ATGGAAAGGCCAGCGTCTGCTTCACTCCTGATATCGTGGGTACAATACAGATTAGGCTGGCCCACTTTTTaGAGAAGAGGACACTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: MERPASASLLISWVQYRLGWPTF*RRGHWW Trigger: CCACCAGTGTCCTCTTCTTCAAAAAGTGGGCCAGCC...TAATCTGTATTGTACCCACGATATCAGGAGTGAAGCAGACGCTGGCCTTTCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR TCA 90 bp | TGGAGAAATGGCTCAGCAGTTAAAAGCACTGACTGCTCTGCTCTTCCAGAGGACGCTTGCACTCTACAGTaGGCAAGCCATCTTCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: WRNGSAVKSTDCSALPEDACTLQ*ASHLLL Trigger: CAGTAGAAGATGGCTTGCTCACTGTAGAGTGCAAGC...GTCCTCTGGAAGAGCAGAGCAGTCAGTGCTTTTAACTGCTGAGCCATTTCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| CDS-3UTR GCA 90 bp | TGTGTTTGGCAGAGATGCTGGGCCATGTGGTGGCTATTCATGGAAAGGCCAGCGAAATTCTCATTACACTaGAGCAACTCCAGCGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CVWQRCWAMWWLFMERPAKFSLH*SNSSES Trigger: TGACTCGCTGGAGTTGCTGCAGTGTAATGAGAATTT...CGCTGGCCTTTCCATGAATAGCCACCACATGGCCCAGCATCTCTGCCAAACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR GCA 90 bp | TGGAGAAATGGCTCAGCAGTTAAAAGCACTGACTGCTCTGCTCTTCCAGAGGACCCTTTCAGAAAGCAGTaGCAAATGGTGGATGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WRNGSAVKSTDCSALPEDPFRKQ*QMVDGQ Trigger: CTGGCCATCCACCATTTGGCACTGCTTTCTGAAAGG...GTCCTCTGGAAGAGCAGAGCAGTCAGTGCTTTTAACTGCTGAGCCATTTCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| CDS-3UTR CCA 90 bp | GTGCAAGTGGTGCACTGCAGTAAGTGCAAAGTCTGCCCCACCAGAGACACACTGGTATCCTGGAGAGGATaGCAAATTCTCATTACACTG | + |
|
Preference number: 4 (lower is better) Translates to: VQVVHCSKCKVCPTRDTLVSWRG*QILITL Trigger: CAGTGTAATGAGAATTTGCCATCCTCTCCAGGATAC...CAGTGTGTCTCTGGTGGGGCAGACTTTGCACTTACTGCAGTGCACCACTTGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR CCA 90 bp | GTAGCTCAGAGCAAGAGCAGCAGGACTGCTGAAGTACTTGCTCTGTCTCAGAAGTTATTGCTTTCCTTATaGAAGCACAGCCGCGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VAQSKSSRTAEVLALSQKLLLSL*KHSRVP Trigger: AGGCACGCGGCTGTGCTTCCATAAGGAAAGCAATAA...CTTCTGAGACAGAGCAAGTACTTCAGCAGTCCTGCTGCTCTTGCTCTGAGCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR CCA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCTCCCACACCATGTTATaGTGCTCCGACGCGCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: NRACYFFWGFPFFDCFVSSHTML*CSDAQA Trigger: CGCCTGCGCGTCGGAGCACCATAACATGGTGTGGGA...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
||
| 3UTR CAA 72 bp | ACAATGACACCGACACCATCCACCTGCCATGTTATGTaGTCTCTTGGCACTGGCCAGACTAGAAGCAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: TMTPTPSTCHVM*SLGTGQTRSNC Trigger: ACAGTTGCTTCTAGTCTGGCCAGTGCCAAGAGACAACATAACATGGCAGGTGGATGGTGTCGGTGTCATTGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR TCA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCTCCTTCCAGTGGTCATaGGGGAAGGCTGGCCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: NRACYFFWGFPFFDCFVSSFQWS*GKAGPL Trigger: AAGTGGGCCAGCCTTCCCTCATGACCACTGGAAGGA...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
||
| CDS-3UTR GCA 90 bp | ATGTTATGTTGTCTCTTGGCACTGGCCAGACTAGAAGCAACTGTGTTTGGCAGAGTCACTCATCCCTGGTaGTCTCTTGTCCATCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: MLCCLLALARLEATVFGRVTHPW*SLVHHQ Trigger: CTGGTGATGGACAAGAGAGCACCAGGGATGAGTGAC...TCTGCCAAACACAGTTGCTTCTAGTCTGGCCAGTGCCAAGAGACAACATAACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR GCA 90 bp | ACCTGCCATGTTATGTTGTCTCTTGGCACTGGCCAGACTAGAAGCAACTGTGTTTGGATGGCCAGGAATTaGACCAGCCCAGATCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: TCHVMLSLGTGQTRSNCVWMARN*TSPDHH Trigger: ATGATGATCTGGGCTGGTGCAATTCCTGGCCATCCA...AACACAGTTGCTTCTAGTCTGGCCAGTGCCAAGAGACAACATAACATGGCAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR CCA 90 bp | GGAGGGAGTAAAGTGCAAGTGGTGCACTGCAGTAAGTGCAAAGTCTGCCCCACCACATCTGAACTTAGCTaGTATATGGCAGATTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GGSKVQVVHCSKCKVCPTTSELS*YMADWV Trigger: TACCCAATCTGCCATATACCAGCTAAGTTCAGATGT...GGTGGGGCAGACTTTGCACTTACTGCAGTGCACCACTTGCACTTTACTCCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR CCA 90 bp | AGTAAAGTGCAAGTGGTGCACTGCAGTAAGTGCAAAGTCTGCCCCACCAGAGACCATCAGGGGACTTTGTaGACTAGTGGCAATATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SKVQVVHCSKCKVCPTRDHQGTL*TSGNIC Trigger: GCAAATATTGCCACTAGTCCACAAAGTCCCCTGATG...GTCTCTGGTGGGGCAGACTTTGCACTTACTGCAGTGCACCACTTGCACTTTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR CCA 90 bp | ACCTGCCATGTTATGTTGTCTCTTGGCACTGGCCAGACTAGAAGCAACTGTGTTGAAAGCAGTGCCAAATaGTGGATGGCCAGGAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: TCHVMLSLGTGQTRSNCVESSAK*WMARNC Trigger: GCAATTCCTGGCCATCCACCATTTGGCACTGCTTTC...AACACAGTTGCTTCTAGTCTGGCCAGTGCCAAGAGACAACATAACATGGCAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR CCA 90 bp | AGACACACTGACAGCACAGATGAGGGTATGTGGCTGAGGAGACAGGAACGCGGTATGAATTTCACAACATaGAATGCCATGCTGTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: RHTDSTDEGMWLRRQERGMNFTT*NAMLYH Trigger: GTGGTACAGCATGGCATTCCATGTTGTGAAATTCAT...ACCGCGTTCCTGTCTCCTCAGCCACATACCCTCATCTGTGCTGTCAGTGTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR TCA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCGGCTGGCCCACTTTTTaGAGAAGAGGACACTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NRACYFFWGFPFFDCFVSGWPTF*RRGHWW Trigger: CCACCAGTGTCCTCTTCTTCAAAAAGTGGGCCAGCC...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
||
| CDS-3UTR TCA 90 bp | ACCTGCCATGTTATGTTGTCTCTTGGCACTGGCCAGACTAGAAGCAACTGTGTTTACAGACTCACCGAATaGCACACTCTCTTCATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TCHVMLSLGTGQTRSNCVYRLTE*HTLFMG Trigger: TCCCATGAAGAGAGTGTGTCATTCGGTGAGTCTGTA...AACACAGTTGCTTCTAGTCTGGCCAGTGCCAAGAGACAACATAACATGGCAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR TCA 90 bp | GTGCAAGTGGTGCACTGCAGTAAGTGCAAAGTCTGCCCCACCAGAGACACACTGCATACGTCACCAATATaGATTTCACAACATGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: VQVVHCSKCKVCPTRDTLHTSPI*ISQHGM Trigger: CATTCCATGTTGTGAAATTCATATTGGTGACGTATG...CAGTGTGTCTCTGGTGGGGCAGACTTTGCACTTACTGCAGTGCACCACTTGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR TCA 90 bp | AGACACACTGACAGCACAGATGAGGGTATGTGGCTGAGGAGACAGGAACGCGGTTTTTGGCAAAAAGCATaGAGGCATTCATTGGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RHTDSTDEGMWLRRQERGFWQKA*RHSLVF Trigger: AAAGACCAATGAATGCCTTCATGCTTTTTGCCAAAA...ACCGCGTTCCTGTCTCCTCAGCCACATACCCTCATCTGTGCTGTCAGTGTGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR TCA 90 bp | GCCATGATTGTAGCTCAGAGCAAGAGCAGCAGGACTGCTGAAGTACTTGCTCTGATGCTGTTGAGAGCCTaGGTTGGTTCTTTTCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: AMIVAQSKSSRTAEVLALMLLRA*VGSFPF Trigger: AAAAGGAAAAGAACCAACTCAGGCTCTCAACAGCAT...CAGAGCAAGTACTTCAGCAGTCCTGCTGCTCTTGCTCTGAGCTACAATCATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR CCA 90 bp | TGGAGAAATGGCTCAGCAGTTAAAAGCACTGACTGCTCTGCTCTTCCAGAGGACACAGGAGTTGTATCCTaGAGAGGATGGCAAATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: WRNGSAVKSTDCSALPEDTGVVS*RGWQIL Trigger: GAGAATTTGCCATCCTCTCCAGGATACAACTCCTGT...GTCCTCTGGAAGAGCAGAGCAGTCAGTGCTTTTAACTGCTGAGCCATTTCTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| CDS-3UTR CCA 90 bp | GTAGCTCAGAGCAAGAGCAGCAGGACTGCTGAAGTACTTGCTCTGTCTCAGAAGCCTTTCATGTCTTACTaGTGTTTCTTCCTTCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VAQSKSSRTAEVLALSQKPFMSY*CFFLPV Trigger: CACTGGAAGGAAGAAACACCAGTAAGACATGAAAGG...CTTCTGAGACAGAGCAAGTACTTCAGCAGTCCTGCTGCTCTTGCTCTGAGCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR CCA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCGTGCCAAATGGTGGATaGCCAGGAATTGCACCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NRACYFFWGFPFFDCFVSVPNGG*PGIAPA Trigger: GGCTGGTGCAATTCCTGGCCATCCACCATTTGGCAC...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
||
| CDS-3UTR CCA 90 bp | AGACACACTGACAGCACAGATGAGGGTATGTGGCTGAGGAGACAGGAACGCGGTCATGAAGGCATTCATTaGTCTTTTGCACTTATTAGG | + |
|
Preference number: 4 (lower is better) Translates to: RHTDSTDEGMWLRRQERGHEGIH*SFALIR Trigger: CCTAATAAGTGCAAAAGACCAATGAATGCCTTCATG...ACCGCGTTCCTGTCTCCTCAGCCACATACCCTCATCTGTGCTGTCAGTGTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR TCA 90 bp | ACCTGCCATGTTATGTTGTCTCTTGGCACTGGCCAGACTAGAAGCAACTGTGTTACTGCATTAGGCATCTaGTTTGTCTTCACTTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TCHVMLSLGTGQTRSNCVTALGI*FVFTSH Trigger: GTGGGAAGTGAAGACAAATCAGATGCCTAATGCAGT...AACACAGTTGCTTCTAGTCTGGCCAGTGCCAAGAGACAACATAACATGGCAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR TCA 90 bp | AGTAAAGTGCAAGTGGTGCACTGCAGTAAGTGCAAAGTCTGCCCCACCAGAGACATTCTGGCTCCAAGATaGTCTTGGATATTCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SKVQVVHCSKCKVCPTRDILAPR*SWIFLM Trigger: CATCAAGAATATCCAAGATCATCTTGGAGCCAGAAT...GTCTCTGGTGGGGCAGACTTTGCACTTACTGCAGTGCACCACTTGCACTTTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR TCA 90 bp | GGCTATTCTGTACAAACACATCAACTCTTAAAGATGCACTTGGAATGCAAAGCTTCCTTCCAGTGGTCATaGGGGAAGGCTGGCCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: GYSVQTHQLLKMHLECKASFQWS*GKAGPL Trigger: AAGTGGGCCAGCCTTCCCTCATGACCACTGGAAGGA...AGCTTTGCATTCCAAGTGCATCTTTAAGAGTTGATGTGTTTGTACAGAATAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| CDS-3UTR TCA 90 bp | GGCTATTCTGTACAAACACATCAACTCTTAAAGATGCACTTGGAATGCAAAGCTGGCACTCACAGTCCCTaGGCTGTGGCTTTTGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: GYSVQTHQLLKMHLECKAGTHSP*AVAFDS Trigger: GCTGTCAAAAGCCACAGCTCAGGGACTGTGAGTGCC...AGCTTTGCATTCCAAGTGCATCTTTAAGAGTTGATGTGTTTGTACAGAATAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| CDS-3UTR GCA 90 bp | GTAGCTCAGAGCAAGAGCAGCAGGACTGCTGAAGTACTTGCTCTGTCTCAGAAGCAGGAGTTTCTGTACTaGATTAGGCATCTGATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VAQSKSSRTAEVLALSQKQEFLY*IRHLIC Trigger: ACAAATCAGATGCCTAATGCAGTACAGAAACTCCTG...CTTCTGAGACAGAGCAAGTACTTCAGCAGTCCTGCTGCTCTTGCTCTGAGCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR GCA 90 bp | TGGAGAAATGGCTCAGCAGTTAAAAGCACTGACTGCTCTGCTCTTCCAGAGGACAGGACATACAGAAAATaGCTGACTCTGACTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: WRNGSAVKSTDCSALPEDRTYRK*LTLTHC Trigger: ACAGTGAGTCAGAGTCAGGCATTTTCTGTATGTCCT...GTCCTCTGGAAGAGCAGAGCAGTCAGTGCTTTTAACTGCTGAGCCATTTCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| CDS-3UTR GCA 90 bp | GCCATGATTGTAGCTCAGAGCAAGAGCAGCAGGACTGCTGAAGTACTTGCTCTGCTTGCCATTCCTTATTaGTTTCCTTATGGAAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: AMIVAQSKSSRTAEVLALLAIPY*FPYGST Trigger: TGTGCTTCCATAAGGAAAGCAATAAGGAATGGCAAG...CAGAGCAAGTACTTCAGCAGTCCTGCTGCTCTTGCTCTGAGCTACAATCATGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR CCA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCCGAGTCACTCATCCCTaGTGCTCTCTTGTCCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: NRACYFFWGFPFFDCFVSRVTHP*CSLVHH Trigger: GTGATGGACAAGAGAGCACCAGGGATGAGTGACTCG...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
||
| CDS-3UTR CCA 90 bp | ACCTGCCATGTTATGTTGTCTCTTGGCACTGGCCAGACTAGAAGCAACTGTGTTACAGGAGTTGTATCCTaGAGAGGATGGCAAATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TCHVMLSLGTGQTRSNCVTGVVS*RGWQIL Trigger: GAGAATTTGCCATCCTCTCCAGGATACAACTCCTGT...AACACAGTTGCTTCTAGTCTGGCCAGTGCCAAGAGACAACATAACATGGCAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR CCA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCAGAAGAGGACACTGGTaGTGGGCGTGCATAGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: NRACYFFWGFPFFDCFVSRRGHW*WACIGM Trigger: CATTCCTATGCACGCCCACCACCAGTGTCCTCTTCT...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
||
| CDS-3UTR CCA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCAGCAGTGCCAAATGGTaGATGGCCAGGAATTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: NRACYFFWGFPFFDCFVSSSAKW*MARNCT Trigger: GGTGCAATTCCTGGCCATCCACCATTTGGCACTGCT...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
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| CDS-3UTR CCA 90 bp | GTGCAAGTGGTGCACTGCAGTAAGTGCAAAGTCTGCCCCACCAGAGACACACTGTCTGTTATCTTTCCCTaGATACATCTGAGTATATTC | + |
|
Preference number: 4 (lower is better) Translates to: VQVVHCSKCKVCPTRDTLSVIFP*IHLSIF Trigger: GAATATACTCAGATGTATCCAGGGAAAGATAACAGA...CAGTGTGTCTCTGGTGGGGCAGACTTTGCACTTACTGCAGTGCACCACTTGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR TCA 90 bp | GGCTATTCTGTACAAACACATCAACTCTTAAAGATGCACTTGGAATGCAAAGCTGGCTGGCCCACTTTTTaGAGAAGAGGACACTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GYSVQTHQLLKMHLECKAGWPTF*RRGHWW Trigger: CCACCAGTGTCCTCTTCTTCAAAAAGTGGGCCAGCC...AGCTTTGCATTCCAAGTGCATCTTTAAGAGTTGATGTGTTTGTACAGAATAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| CDS-3UTR TCA 90 bp | ATGGAAAGGCCAGCGTCTGCTTCACTCCTGATATCGTGGGTACAATACAGATTACAGATCATCATCATCTaGCAGGGAGGACATACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: MERPASASLLISWVQYRLQIIII*QGGHTE Trigger: TTCTGTATGTCCTCCCTGTCAGATGATGATGATCTG...TAATCTGTATTGTACCCACGATATCAGGAGTGAAGCAGACGCTGGCCTTTCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR TCA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCGCTTGCACTCTACAGTaGGCAAGCCATCTTCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: NRACYFFWGFPFFDCFVSACTLQ*ASHLLL Trigger: CAGTAGAAGATGGCTTGCTCACTGTAGAGTGCAAGC...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
||
| CDS-3UTR GCA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCTGGATGGCCAGGAATTaGACCAGCCCAGATCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: NRACYFFWGFPFFDCFVSWMARN*TSPDHH Trigger: ATGATGATCTGGGCTGGTGCAATTCCTGGCCATCCA...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
||
| CDS-3UTR GCA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCCCTTTCAGAAAGCAGTaGCAAATGGTGGATGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NRACYFFWGFPFFDCFVSPFRKQ*QMVDGQ Trigger: CTGGCCATCCACCATTTGGCACTGCTTTCTGAAAGG...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
||
| CDS-3UTR GCA 90 bp | GGCTATTCTGTACAAACACATCAACTCTTAAAGATGCACTTGGAATGCAAAGCTTCCACAAGACAGAGATaGACGGCGCTGACGAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GYSVQTHQLLKMHLECKASTRQR*TALTSH Trigger: ATGGCTCGTCAGCGCCGTGCATCTCTGTCTTGTGGA...AGCTTTGCATTCCAAGTGCATCTTTAAGAGTTGATGTGTTTGTACAGAATAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| CDS-3UTR CCA 90 bp | TCTTTGAGGAGCTGGAGAAATGGCTCAGCAGTTAAAAGCACTGACTGCTCTGCTGTATCCTGGAGAGGATaGCAAATTCTCATTACACTG | + |
|
Preference number: 4 (lower is better) Translates to: SLRSWRNGSAVKSTDCSAVSWRG*QILITL Trigger: CAGTGTAATGAGAATTTGCCATCCTCTCCAGGATAC...AGCAGAGCAGTCAGTGCTTTTAACTGCTGAGCCATTTCTCCAGCTCCTCAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| CDS-3UTR CCA 90 bp | GGCTATTCTGTACAAACACATCAACTCTTAAAGATGCACTTGGAATGCAAAGCTGTGCCAAATGGTGGATaGCCAGGAATTGCACCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GYSVQTHQLLKMHLECKAVPNGG*PGIAPA Trigger: GGCTGGTGCAATTCCTGGCCATCCACCATTTGGCAC...AGCTTTGCATTCCAAGTGCATCTTTAAGAGTTGATGTGTTTGTACAGAATAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
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| CDS-3UTR CCA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCGAAAGCAGTGCCAAATaGTGGATGGCCAGGAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: NRACYFFWGFPFFDCFVSESSAK*WMARNC Trigger: GCAATTCCTGGCCATCCACCATTTGGCACTGCTTTC...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGAAATGGCTCAGCAGTTAAAAGCACTGACTGCTCTGCTCTTCCAGAGGACGACACACTCTCTTCATaGGATAACAACTTTAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: WRNGSAVKSTDCSALPEDDTLSS*DNNFRP Trigger: TGGTCTAAAGTTGTTATCCCATGAAGAGAGTGTGTC...GTCCTCTGGAAGAGCAGAGCAGTCAGTGCTTTTAACTGCTGAGCCATTTCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
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| CDS-3UTR CCA 90 bp | ACAAACGACACTGAAGGAGTTTATTTTGCAGGCACAGTTACTGTGAACTGCCCTACAGTCCCTGAGCTGTaGCTTTTGACAGCTTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TNDTEGVYFAGTVTVNCPTVPEL*LLTALA Trigger: TGCTAAAGCTGTCAAAAGCCACAGCTCAGGGACTGT...AGGGCAGTTCACAGTAACTGTGCCTGCAAAATAAACTCCTTCAGTGTCGTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
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| CDS-3UTR CCA 90 bp | GTAAGTAACATGAGAAGCCATGATTGTAGCTCAGAGCAAGAGCAGCAGGACTGCCAAGGATCACACTTATaGCTCTGTTATCTTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSNMRSHDCSSEQEQQDCQGSHL*LCYLSL Trigger: CAGGGAAAGATAACAGAGCCATAAGTGTGATCCTTG...GCAGTCCTGCTGCTCTTGCTCTGAGCTACAATCATGGCTTCTCATGTTACTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| CDS-3UTR TCA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCTACAGACTCACCGAATaGCACACTCTCTTCATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NRACYFFWGFPFFDCFVSYRLTE*HTLFMG Trigger: TCCCATGAAGAGAGTGTGTCATTCGGTGAGTCTGTA...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
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| CDS-3UTR GCA 90 bp | ATGTTATGTTGTCTCTTGGCACTGGCCAGACTAGAAGCAACTGTGTTTGGCAGATCATCAAGCTCCATGTaGTCATCACAGGAGTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: MLCCLLALARLEATVFGRSSSSM*SSQELY Trigger: ATACAACTCCTGTGATGAGCACATGGAGCTTGATGA...TCTGCCAAACACAGTTGCTTCTAGTCTGGCCAGTGCCAAGAGACAACATAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| CDS-3UTR GCA 90 bp | ATGTTATGTTGTCTCTTGGCACTGGCCAGACTAGAAGCAACTGTGTTTGGCAGAAGGACATACAGAAAATaGCTGACTCTGACTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: MLCCLLALARLEATVFGRRTYRK*LTLTHC Trigger: ACAGTGAGTCAGAGTCAGGCATTTTCTGTATGTCCT...TCTGCCAAACACAGTTGCTTCTAGTCTGGCCAGTGCCAAGAGACAACATAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| CDS-3UTR CCA 90 bp | GGCTATTCTGTACAAACACATCAACTCTTAAAGATGCACTTGGAATGCAAAGCTTCCCACACCATGTTATaGTGCTCCGACAAACCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: GYSVQTHQLLKMHLECKASHTML*CSDKPV Trigger: GACGGGTTTGTCGGAGCACCATAACATGGTGTGGGA...AGCTTTGCATTCCAAGTGCATCTTTAAGAGTTGATGTGTTTGTACAGAATAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| CDS-3UTR CCA 90 bp | AGGACAAGGCTATTCTGTACAAACACATCAACTCTTAAAGATGCACTTGGAATGCGAGTCACTCATCCCTaGTGCTCTCTTGTCCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: RTRLFCTNTSTLKDALGMRVTHP*CSLVHH Trigger: GTGATGGACAAGAGAGCACCAGGGATGAGTGACTCG...CATTCCAAGTGCATCTTTAAGAGTTGATGTGTTTGTACAGAATAGCCTTGTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| CDS-3UTR CCA 90 bp | GGCTATTCTGTACAAACACATCAACTCTTAAAGATGCACTTGGAATGCAAAGCTAGAAGAGGACACTGGTaGTGGGCGTGCATAGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: GYSVQTHQLLKMHLECKARRGHW*WACIGM Trigger: CATTCCTATGCACGCCCACCACCAGTGTCCTCTTCT...AGCTTTGCATTCCAAGTGCATCTTTAAGAGTTGATGTGTTTGTACAGAATAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| CDS-3UTR CCA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCTTATTGCTTTCCTTATaGAAGCACAGCCGCGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NRACYFFWGFPFFDCFVSLLLSL*KHSRVP Trigger: AGGCACGCGGCTGTGCTTCCATAAGGAAAGCAATAA...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGAAATGGCTCAGCAGTTAAAAGCACTGACTGCTCTGCTCTTCCAGAGGACCATGAAGGCATTCATTaGTCTTTTGCACTTATTAGG | + |
|
Preference number: 4 (lower is better) Translates to: WRNGSAVKSTDCSALPEDHEGIH*SFALIR Trigger: CCTAATAAGTGCAAAAGACCAATGAATGCCTTCATG...GTCCTCTGGAAGAGCAGAGCAGTCAGTGCTTTTAACTGCTGAGCCATTTCTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| CDS-3UTR TCA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCACTGCATTAGGCATCTaGTTTGTCTTCACTTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NRACYFFWGFPFFDCFVSTALGI*FVFTSH Trigger: GTGGGAAGTGAAGACAAATCAGATGCCTAATGCAGT...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
||
| CDS-3UTR TCA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCCAGATCATCATCATCTaGCAGGGAGGACATACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NRACYFFWGFPFFDCFVSQIIII*QGGHTE Trigger: TTCTGTATGTCCTCCCTGTCAGATGATGATGATCTG...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
||
| CDS-3UTR TCA 90 bp | TCTTTGAGGAGCTGGAGAAATGGCTCAGCAGTTAAAAGCACTGACTGCTCTGCTCATACGTCACCAATATaGATTTCACAACATGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: SLRSWRNGSAVKSTDCSAHTSPI*ISQHGM Trigger: CATTCCATGTTGTGAAATTCATATTGGTGACGTATG...AGCAGAGCAGTCAGTGCTTTTAACTGCTGAGCCATTTCTCCAGCTCCTCAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| CDS-3UTR TCA 90 bp | AAACCCAAACTGGTTTTTGATTTGGAAAAAGGTCCATTTGACTCATTTCCCGTTAGAGATGCACGGCGCTaGCGAGCCATACTACTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KPKLVFDLEKGPFDSFPVRDARR*RAILLK Trigger: TTTGAGTAGTATGGCTCGTCAGCGCCGTGCATCTCT...AACGGGAAATGAGTCAAATGGACCTTTTTCCAAATCAAAAACCAGTTTGGGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| CDS-3UTR GCA 90 bp | ACAAACGACACTGAAGGAGTTTATTTTGCAGGCACAGTTACTGTGAACTGCCCTAAATTCTCATTACACTaGAGCAACTCCAGCGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TNDTEGVYFAGTVTVNCPKFSLH*SNSSES Trigger: TGACTCGCTGGAGTTGCTGCAGTGTAATGAGAATTT...AGGGCAGTTCACAGTAACTGTGCCTGCAAAATAAACTCCTTCAGTGTCGTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| CDS-3UTR GCA 90 bp | ACAAACGACACTGAAGGAGTTTATTTTGCAGGCACAGTTACTGTGAACTGCCCTTCATCAAGCTCCATGTaGTCATCACAGGAGTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TNDTEGVYFAGTVTVNCPSSSSM*SSQELY Trigger: ATACAACTCCTGTGATGAGCACATGGAGCTTGATGA...AGGGCAGTTCACAGTAACTGTGCCTGCAAAATAAACTCCTTCAGTGTCGTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| CDS-3UTR GCA 90 bp | GGCTATTCTGTACAAACACATCAACTCTTAAAGATGCACTTGGAATGCAAAGCTTGGATGGCCAGGAATTaGACCAGCCCAGATCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: GYSVQTHQLLKMHLECKAWMARN*TSPDHH Trigger: ATGATGATCTGGGCTGGTGCAATTCCTGGCCATCCA...AGCTTTGCATTCCAAGTGCATCTTTAAGAGTTGATGTGTTTGTACAGAATAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| CDS-3UTR GCA 90 bp | ATGTTATGTTGTCTCTTGGCACTGGCCAGACTAGAAGCAACTGTGTTTGGCAGAAAGTCTTCCACATCTTaGCATTCCTTATTGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: MLCCLLALARLEATVFGRKSSTS*HSLLLS Trigger: GGAAAGCAATAAGGAATGGCAAGATGTGGAAGACTT...TCTGCCAAACACAGTTGCTTCTAGTCTGGCCAGTGCCAAGAGACAACATAACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR GCA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCCAACATGGAATGCCATaGTGTACCACAGTCAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NRACYFFWGFPFFDCFVSQHGMP*CTTVKL Trigger: AAGCTTGACTGTGGTACAGCATGGCATTCCATGTTG...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
||
| CDS-3UTR CCA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCACAGGAGTTGTATCCTaGAGAGGATGGCAAATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NRACYFFWGFPFFDCFVSTGVVS*RGWQIL Trigger: GAGAATTTGCCATCCTCTCCAGGATACAACTCCTGT...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
||
| CDS-3UTR CCA 90 bp | ATGGAAAGGCCAGCGTCTGCTTCACTCCTGATATCGTGGGTACAATACAGATTAATATCTGAGGTATTCTaGCTCCAAGATGATCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: MERPASASLLISWVQYRLISEVF*LQDDLG Trigger: TCCAAGATCATCTTGGAGCCAGAATACCTCAGATAT...TAATCTGTATTGTACCCACGATATCAGGAGTGAAGCAGACGCTGGCCTTTCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR CCA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCCATCAGGGGACTTTGTaGACTAGTGGCAATATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: NRACYFFWGFPFFDCFVSHQGTL*TSGNIC Trigger: GCAAATATTGCCACTAGTCCACAAAGTCCCCTGATG...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
||
| CDS-3UTR CCA 90 bp | AGGACAAGGCTATTCTGTACAAACACATCAACTCTTAAAGATGCACTTGGAATGGAAAGCAGTGCCAAATaGTGGATGGCCAGGAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: RTRLFCTNTSTLKDALGMESSAK*WMARNC Trigger: GCAATTCCTGGCCATCCACCATTTGGCACTGCTTTC...CATTCCAAGTGCATCTTTAAGAGTTGATGTGTTTGTACAGAATAGCCTTGTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| CDS-3UTR CCA 90 bp | ATGGAAAGGCCAGCGTCTGCTTCACTCCTGATATCGTGGGTACAATACAGATTAGACACACTCTCTTCATaGGATAACAACTTTAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: MERPASASLLISWVQYRLDTLSS*DNNFRP Trigger: TGGTCTAAAGTTGTTATCCCATGAAGAGAGTGTGTC...TAATCTGTATTGTACCCACGATATCAGGAGTGAAGCAGACGCTGGCCTTTCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR GCA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCAAATTCTCATTACACTaGAGCAACTCCAGCGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NRACYFFWGFPFFDCFVSKFSLH*SNSSES Trigger: TGACTCGCTGGAGTTGCTGCAGTGTAATGAGAATTT...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
||
| CDS-3UTR GCA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCTCATCAAGCTCCATGTaGTCATCACAGGAGTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: NRACYFFWGFPFFDCFVSSSSSM*SSQELY Trigger: ATACAACTCCTGTGATGAGCACATGGAGCTTGATGA...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
||
| CDS-3UTR GCA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCAGGACATACAGAAAATaGCTGACTCTGACTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: NRACYFFWGFPFFDCFVSRTYRK*LTLTHC Trigger: ACAGTGAGTCAGAGTCAGGCATTTTCTGTATGTCCT...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
||
| CDS-3UTR GCA 90 bp | CAAAACTCTCACTTGGTAAGTAACATGAGAAGCCATGATTGTAGCTCAGAGCAACAACATGGAATGCCATaGTGTACCACAGTCAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QNSHLVSNMRSHDCSSEQQHGMP*CTTVKL Trigger: AAGCTTGACTGTGGTACAGCATGGCATTCCATGTTG...TTGCTCTGAGCTACAATCATGGCTTCTCATGTTACTTACCAAGTGAGAGTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR CCA 90 bp | TGGGTACAATACAGATTAATAAGCAGTAAGGAGCTGATGTATAAACAGCAGTTACGAGTCACTCATCCCTaGTGCTCTCTTGTCCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: WVQYRLISSKELMYKQQLRVTHP*CSLVHH Trigger: GTGATGGACAAGAGAGCACCAGGGATGAGTGACTCG...TAACTGCTGTTTATACATCAGCTCCTTACTGCTTATTAATCTGTATTGTACCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| CDS-3UTR CCA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCGTATCCTGGAGAGGATaGCAAATTCTCATTACACTG | + |
|
Preference number: 4 (lower is better) Translates to: NRACYFFWGFPFFDCFVSVSWRG*QILITL Trigger: CAGTGTAATGAGAATTTGCCATCCTCTCCAGGATAC...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
||
| CDS-3UTR CCA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCCCTTTCATGTCTTACTaGTGTTTCTTCCTTCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NRACYFFWGFPFFDCFVSPFMSY*CFFLPV Trigger: CACTGGAAGGAAGAAACACCAGTAAGACATGAAAGG...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
||
| CDS-3UTR CCA 90 bp | AGGACAAGGCTATTCTGTACAAACACATCAACTCTTAAAGATGCACTTGGAATGTTATTGCTTTCCTTATaGAAGCACAGCCGCGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RTRLFCTNTSTLKDALGMLLLSL*KHSRVP Trigger: AGGCACGCGGCTGTGCTTCCATAAGGAAAGCAATAA...CATTCCAAGTGCATCTTTAAGAGTTGATGTGTTTGTACAGAATAGCCTTGTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| CDS-3UTR TCA 90 bp | AGGACAAGGCTATTCTGTACAAACACATCAACTCTTAAAGATGCACTTGGAATGACTGCATTAGGCATCTaGTTTGTCTTCACTTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RTRLFCTNTSTLKDALGMTALGI*FVFTSH Trigger: GTGGGAAGTGAAGACAAATCAGATGCCTAATGCAGT...CATTCCAAGTGCATCTTTAAGAGTTGATGTGTTTGTACAGAATAGCCTTGTCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| CDS-3UTR TCA 90 bp | TATGCCAACTGGCCTAATAGCTTTCTATATGTCTACATTCTGCCCCTAAGAAAACAGATCATCATCATCTaGCAGGGAGGACATACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: YANWPNSFLYVYILPLRKQIIII*QGGHTE Trigger: TTCTGTATGTCCTCCCTGTCAGATGATGATGATCTG...TTTTCTTAGGGGCAGAATGTAGACATATAGAAAGCTATTAGGCCAGTTGGCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| CDS-3UTR TCA 90 bp | AAACCCAAACTGGTTTTTGATTTGGAAAAAGGTCCATTTGACTCATTTCCCGTTTACAGACTCACCGAATaGCACACTCTCTTCATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KPKLVFDLEKGPFDSFPVYRLTE*HTLFMG Trigger: TCCCATGAAGAGAGTGTGTCATTCGGTGAGTCTGTA...AACGGGAAATGAGTCAAATGGACCTTTTTCCAAATCAAAAACCAGTTTGGGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| CDS-3UTR GCA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCCAGGAGTTTCTGTACTaGATTAGGCATCTGATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NRACYFFWGFPFFDCFVSQEFLY*IRHLIC Trigger: ACAAATCAGATGCCTAATGCAGTACAGAAACTCCTG...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
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| CDS-3UTR GCA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCCTTGCCATTCCTTATTaGTTTCCTTATGGAAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: NRACYFFWGFPFFDCFVSLAIPY*FPYGST Trigger: TGTGCTTCCATAAGGAAAGCAATAAGGAATGGCAAG...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
||
| CDS-3UTR GCA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCAAGTCTTCCACATCTTaGCATTCCTTATTGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NRACYFFWGFPFFDCFVSKSSTS*HSLLLS Trigger: GGAAAGCAATAAGGAATGGCAAGATGTGGAAGACTT...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
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| CDS-3UTR CCA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCACATCTGAACTTAGCTaGTATATGGCAGATTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: NRACYFFWGFPFFDCFVSTSELS*YMADWV Trigger: TACCCAATCTGCCATATACCAGCTAAGTTCAGATGT...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
||
| CDS-3UTR CCA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCATATCTGAGGTATTCTaGCTCCAAGATGATCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NRACYFFWGFPFFDCFVSISEVF*LQDDLG Trigger: TCCAAGATCATCTTGGAGCCAGAATACCTCAGATAT...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
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| CDS-3UTR CCA 90 bp | GGCTATTCTGTACAAACACATCAACTCTTAAAGATGCACTTGGAATGCAAAGCTCATCAGGGGACTTTGTaGACTAGTGGCAATATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GYSVQTHQLLKMHLECKAHQGTL*TSGNIC Trigger: GCAAATATTGCCACTAGTCCACAAAGTCCCCTGATG...AGCTTTGCATTCCAAGTGCATCTTTAAGAGTTGATGTGTTTGTACAGAATAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
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| CDS-3UTR CCA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCGACACACTCTCTTCATaGGATAACAACTTTAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: NRACYFFWGFPFFDCFVSDTLSS*DNNFRP Trigger: TGGTCTAAAGTTGTTATCCCATGAAGAGAGTGTGTC...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
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| CDS-3UTR CCA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCATGAATTTCACAACATaGAATGCCATGCTGTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: NRACYFFWGFPFFDCFVSMNFTT*NAMLYH Trigger: GTGGTACAGCATGGCATTCCATGTTGTGAAATTCAT...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
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| CDS-3UTR CCA 90 bp | ACAAACGACACTGAAGGAGTTTATTTTGCAGGCACAGTTACTGTGAACTGCCCTCCTGTTATCTTTCCCTaGATACATCTGAGTATATTC | + |
|
Preference number: 4 (lower is better) Translates to: TNDTEGVYFAGTVTVNCPPVIFP*IHLSIF Trigger: GAATATACTCAGATGTATCCAGGGAAAGATAACAGG...AGGGCAGTTCACAGTAACTGTGCCTGCAAAATAAACTCCTTCAGTGTCGTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
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| CDS-3UTR TCA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCCATACGTCACCAATATaGATTTCACAACATGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: NRACYFFWGFPFFDCFVSHTSPI*ISQHGM Trigger: CATTCCATGTTGTGAAATTCATATTGGTGACGTATG...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
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| CDS-3UTR GCA 90 bp | AAACCCAAACTGGTTTTTGATTTGGAAAAAGGTCCATTTGACTCATTTCCCGTTCAACATGGAATGCCATaGTGTACCACAGTCAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KPKLVFDLEKGPFDSFPVQHGMP*CTTVKL Trigger: AAGCTTGACTGTGGTACAGCATGGCATTCCATGTTG...AACGGGAAATGAGTCAAATGGACCTTTTTCCAAATCAAAAACCAGTTTGGGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
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| CDS-3UTR CCA 90 bp | GGCTATTCTGTACAAACACATCAACTCTTAAAGATGCACTTGGAATGCAAAGCTCCTTTCATGTCTTACTaGTGTTTCTTCCTTCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GYSVQTHQLLKMHLECKAPFMSY*CFFLPV Trigger: CACTGGAAGGAAGAAACACCAGTAAGACATGAAAGG...AGCTTTGCATTCCAAGTGCATCTTTAAGAGTTGATGTGTTTGTACAGAATAGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
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| CDS-3UTR GCA 90 bp | TATGCCAACTGGCCTAATAGCTTTCTATATGTCTACATTCTGCCCCTAAGAAAACTTGCCATTCCTTATTaGTTTCCTTATGGAAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: YANWPNSFLYVYILPLRKLAIPY*FPYGST Trigger: TGTGCTTCCATAAGGAAAGCAATAAGGAATGGCAAG...TTTTCTTAGGGGCAGAATGTAGACATATAGAAAGCTATTAGGCCAGTTGGCATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
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| CDS-3UTR GCA 90 bp | TATGCCAACTGGCCTAATAGCTTTCTATATGTCTACATTCTGCCCCTAAGAAAAAAGTCTTCCACATCTTaGCATTCCTTATTGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: YANWPNSFLYVYILPLRKKSSTS*HSLLLS Trigger: GGAAAGCAATAAGGAATGGCAAGATGTGGAAGACTT...TTTTCTTAGGGGCAGAATGTAGACATATAGAAAGCTATTAGGCCAGTTGGCATA 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
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| CDS-3UTR CCA 90 bp | TATGCCAACTGGCCTAATAGCTTTCTATATGTCTACATTCTGCCCCTAAGAAAAATATCTGAGGTATTCTaGCTCCAAGATGATCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: YANWPNSFLYVYILPLRKISEVF*LQDDLG Trigger: TCCAAGATCATCTTGGAGCCAGAATACCTCAGATAT...TTTTCTTAGGGGCAGAATGTAGACATATAGAAAGCTATTAGGCCAGTTGGCATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
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| CDS-3UTR CCA 90 bp | AGGACAAGGCTATTCTGTACAAACACATCAACTCTTAAAGATGCACTTGGAATGATGAATTTCACAACATaGAATGCCATGCTGTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: RTRLFCTNTSTLKDALGMMNFTT*NAMLYH Trigger: GTGGTACAGCATGGCATTCCATGTTGTGAAATTCAT...CATTCCAAGTGCATCTTTAAGAGTTGATGTGTTTGTACAGAATAGCCTTGTCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
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| CDS-3UTR TCA 90 bp | TATGCCAACTGGCCTAATAGCTTTCTATATGTCTACATTCTGCCCCTAAGAAAATTTTGGCAAAAAGCATaGAGGCATTCATTGGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YANWPNSFLYVYILPLRKFWQKA*RHSLVF Trigger: AAAGACCAATGAATGCCTTCATGCTTTTTGCCAAAA...TTTTCTTAGGGGCAGAATGTAGACATATAGAAAGCTATTAGGCCAGTTGGCATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
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| CDS-3UTR CCA 90 bp | AAACCCAAACTGGTTTTTGATTTGGAAAAAGGTCCATTTGACTCATTTCCCGTTACATCTGAACTTAGCTaGTATATGGCAGATTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: KPKLVFDLEKGPFDSFPVTSELS*YMADWV Trigger: TACCCAATCTGCCATATACCAGCTAAGTTCAGATGT...AACGGGAAATGAGTCAAATGGACCTTTTTCCAAATCAAAAACCAGTTTGGGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
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| CDS-3UTR TCA 90 bp | TTCAACCTCATTAATGTATATGCCAACTGGCCTAATAGCTTTCTATATGTCTACATTCTGGCTCCAAGATaGTCTTGGATATTCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: FNLINVYANWPNSFLYVYILAPR*SWIFLM Trigger: CATCAAGAATATCCAAGATCATCTTGGAGCCAGAAT...GTAGACATATAGAAAGCTATTAGGCCAGTTGGCATATACATTAATGAGGTTGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
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| CDS-3UTR GCA 90 bp | TTCAACCTCATTAATGTATATGCCAACTGGCCTAATAGCTTTCTATATGTCTACCAGGAGTTTCTGTACTaGATTAGGCATCTGATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FNLINVYANWPNSFLYVYQEFLY*IRHLIC Trigger: ACAAATCAGATGCCTAATGCAGTACAGAAACTCCTG...GTAGACATATAGAAAGCTATTAGGCCAGTTGGCATATACATTAATGAGGTTGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| 3UTR CAA 72 bp | AACCCAAACTGGTTTTTGATTTGGAAAAAGGTCCATTaGACTCATTTCCCGTTAATGTGTTACTCATATACA | + |
|
Preference number: 4 (lower is better) Translates to: NPNWFLIWKKVH*THFPLMCYSYT Trigger: TGTATATGAGTAACACATTAACGGGAAATGAGTCAAATGGACCTTTTTCCAAATCAAAAACCAGTTTGGGTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| CDS-3UTR CAA 90 bp | GGAGGGAGTAAAGTGCAAGTGGTGCACTGCAGTAAGTGCAAAGTCTGCCCCACCAGGCTGGCCCACTTTTaGAAGAAGAGGACACTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GGSKVQVVHCSKCKVCPTRLAHF*KKRTLV Trigger: CACCAGTGTCCTCTTCTTCAAAAAGTGGGCCAGCCT...GGTGGGGCAGACTTTGCACTTACTGCAGTGCACCACTTGCACTTTACTCCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR CAA 90 bp | AGACACACTGACAGCACAGATGAGGGTATGTGGCTGAGGAGACAGGAACGCGGTAAAGGGTGGTCCAGCTaGCACTCTACAGTGAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: RHTDSTDEGMWLRRQERGKGWSS*HSTVSK Trigger: CTTGCTCACTGTAGAGTGCAAGCTGGACCACCCTTT...ACCGCGTTCCTGTCTCCTCAGCCACATACCCTCATCTGTGCTGTCAGTGTGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS CCA 90 bp | CCTTATGGAAGCACAGCCGCGTGCCTTTCAGAAAGCAGTGCCAAATaGTGGATGGCCAGGAATTGCACCAGCCCAGATCATCATCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: PYGSTAACLSESSAK*WMARNCTSPDHHHL Trigger: CAGATGATGATGATCTGGGCTGGTGCAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTGAAAGGCACGCGGCTGTGCTTCCATAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000167458.9 ENSMUST00000172314.9 ENSMUST00000175686.8 ENSMUST00000176084.2 ENSMUST00000176103.8 ENSMUST00000176520.8 |
||
| CDS-3UTR CAA 90 bp | GTAGCTCAGAGCAAGAGCAGCAGGACTGCTGAAGTACTTGCTCTGTCTCAGAAGATCCCTGGTGCTCTCTaGTCCATCACCAGCAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: VAQSKSSRTAEVLALSQKIPGAL*SITSRS Trigger: ACTCCTGCTGGTGATGGACAAGAGAGCACCAGGGAT...CTTCTGAGACAGAGCAAGTACTTCAGCAGTCCTGCTGCTCTTGCTCTGAGCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS-3UTR CAA 90 bp | AGTAAAGTGCAAGTGGTGCACTGCAGTAAGTGCAAAGTCTGCCCCACCAGAGACGTGGATGGCCAGGAATaGCACCAGCCCAGATCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SKVQVVHCSKCKVCPTRDVDGQE*HQPRSS Trigger: TGATGATCTGGGCTGGTGCAATTCCTGGCCATCCAC...GTCTCTGGTGGGGCAGACTTTGCACTTACTGCAGTGCACCACTTGCACTTTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
||
| CDS TCA 90 bp | CCAGGTGAACCACAGCTTTTACTGAATTCAGATCCCGAAAACTCTTaGCCAGTACCAGGTCCTCCTCCACAAGACAGAGATGCACGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PGEPQLLLNSDPENS*PVPGPPPQDRDARR Trigger: GCGCCGTGCATCTCTGTCTTGTGGAGGAGGACCTGGTACTGGTCAAGAGTTTTCGGGATCTGAATTCAGTAAAAGCTGTGGTTCACCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000167458.9 ENSMUST00000172314.9 ENSMUST00000176643.8 |
||
| CDS GCA 90 bp | GCGTGCCTTTCAGAAAGCAGTGCCAAATGGTGGATGGCCAGGAATTaGACCAGCCCAGATCATCATCATCTGACAGGGAGGACATACAGA | + |
|
Preference number: 5 (lower is better) Translates to: ACLSESSAKWWMARN*TSPDHHHLTGRTYR Trigger: TCTGTATGTCCTCCCTGTCAGATGATGATGATCTGGGCTGGTGCAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTGAAAGGCACGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000167458.9 ENSMUST00000172314.9 ENSMUST00000175686.8 ENSMUST00000176084.2 ENSMUST00000176103.8 ENSMUST00000176520.8 |
||
| CDS GCA 90 bp | TTGCTTTCCTTATGGAAGCACAGCCGCGTGCCTTTCAGAAAGCAGTaGCAAATGGTGGATGGCCAGGAATTGCACCAGCCCAGATCATCA | + |
|
Preference number: 5 (lower is better) Translates to: LLSLWKHSRVPFRKQ*QMVDGQELHQPRSS Trigger: TGATGATCTGGGCTGGTGCAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTGAAAGGCACGCGGCTGTGCTTCCATAAGGAAAGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000167458.9 ENSMUST00000172314.9 ENSMUST00000175686.8 ENSMUST00000176084.2 ENSMUST00000176103.8 ENSMUST00000176520.8 |
||
| CDS GCA 90 bp | CGAAAACTCTTGACCAGTACCAGGTCCTCCTCCACAAGACAGAGATaGACGGCGCTGACGAGCCATACTACTCAAAACATAGACCGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RKLLTSTRSSSTRQR*TALTSHTTQNIDRR Trigger: TCTGCGGTCTATGTTTTGAGTAGTATGGCTCGTCAGCGCCGTGCATCTCTGTCTTGTGGAGGAGGACCTGGTACTGGTCAAGAGTTTTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000167458.9 ENSMUST00000172314.9 ENSMUST00000176643.8 |
||
| CDS CCA 90 bp | TATGGAAGCACAGCCGCGTGCCTTTCAGAAAGCAGTGCCAAATGGTaGATGGCCAGGAATTGCACCAGCCCAGATCATCATCATCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: YGSTAACLSESSAKW*MARNCTSPDHHHLT Trigger: TGTCAGATGATGATGATCTGGGCTGGTGCAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTGAAAGGCACGCGGCTGTGCTTCCATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000167458.9 ENSMUST00000172314.9 ENSMUST00000175686.8 ENSMUST00000176084.2 ENSMUST00000176103.8 ENSMUST00000176520.8 |
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| CDS GCA 90 bp | TCACAGGAGTTGTATCCTGGAGAGGATGGCAAATTCTCATTACACTaGAGCAACTCCAGCGAGTCACTCATCCCTGGTGCTCTCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SQELYPGEDGKFSLH*SNSSESLIPGALLS Trigger: GGACAAGAGAGCACCAGGGATGAGTGACTCGCTGGAGTTGCTGCAGTGTAATGAGAATTTGCCATCCTCTCCAGGATACAACTCCTGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000167458.9 ENSMUST00000172314.9 ENSMUST00000175686.8 ENSMUST00000176084.2 ENSMUST00000176103.8 ENSMUST00000176520.8 |
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| CDS-3UTR CAA 90 bp | GTAGCTCAGAGCAAGAGCAGCAGGACTGCTGAAGTACTTGCTCTGTCTCAGAAGTTGGGTAGGGTCACTTaGAACAGCCTGAAGTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VAQSKSSRTAEVLALSQKLGRVT*NSLKFR Trigger: CCTGAACTTCAGGCTGTTCAAAGTGACCCTACCCAA...CTTCTGAGACAGAGCAAGTACTTCAGCAGTCCTGCTGCTCTTGCTCTGAGCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| CDS-3UTR CAA 90 bp | TCTTTGAGGAGCTGGAGAAATGGCTCAGCAGTTAAAAGCACTGACTGCTCTGCTGTGGATGGCCAGGAATaGCACCAGCCCAGATCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SLRSWRNGSAVKSTDCSAVDGQE*HQPRSS Trigger: TGATGATCTGGGCTGGTGCAATTCCTGGCCATCCAC...AGCAGAGCAGTCAGTGCTTTTAACTGCTGAGCCATTTCTCCAGCTCCTCAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
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| CDS-3UTR CAA 90 bp | AGACACACTGACAGCACAGATGAGGGTATGTGGCTGAGGAGACAGGAACGCGGTCCTGAGCTGTGGCTTTaGACAGCTTTAGCATACAAA | + |
|
Preference number: 5 (lower is better) Translates to: RHTDSTDEGMWLRRQERGPELWL*TALAYK Trigger: TTTGTATGCTAAAGCTGTCAAAAGCCACAGCTCAGG...ACCGCGTTCCTGTCTCCTCAGCCACATACCCTCATCTGTGCTGTCAGTGTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| CDS-3UTR CAA 90 bp | TGTGTTTGGCAGAGATGCTGGGCCATGTGGTGGCTATTCATGGAAAGGCCAGCGCTTCAGCCAAAGCCTTaGCTTCTAATGTGTACATCC | + |
|
Preference number: 5 (lower is better) Translates to: CVWQRCWAMWWLFMERPALQPKP*LLMCTS Trigger: GGATGTACACATTAGAAGCAAAGGCTTTGGCTGAAG...CGCTGGCCTTTCCATGAATAGCCACCACATGGCCCAGCATCTCTGCCAAACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| CDS GCA 90 bp | TCCTCATTATCACAGCTGGCGGCTCTAGCAAAGTCTTCCACATCTTaGCATTCCTTATTGCTTTCCTTATGGAAGCACAGCCGCGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSLSQLAALAKSSTS*HSLLLSLWKHSRVP Trigger: AGGCACGCGGCTGTGCTTCCATAAGGAAAGCAATAAGGAATGGCAAGATGTGGAAGACTTTGCTAGAGCCGCCAGCTGTGATAATGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000167458.9 ENSMUST00000172314.9 ENSMUST00000175686.8 ENSMUST00000176103.8 ENSMUST00000176520.8 |
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| CDS-3UTR CAA 90 bp | GCCATGATTGTAGCTCAGAGCAAGAGCAGCAGGACTGCTGAAGTACTTGCTCTGCTGGTATATGGCAGATaGGGTAGGGTCACTTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: AMIVAQSKSSRTAEVLALLVYGR*GRVTLN Trigger: GTTCAAAGTGACCCTACCCAATCTGCCATATACCAG...CAGAGCAAGTACTTCAGCAGTCCTGCTGCTCTTGCTCTGAGCTACAATCATGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| CDS TCA 90 bp | TTTGCCCTTTCATGTCTTACTGGTGTTTCTTCCTTCCAGTGGTCATaGGGGAAGGCTGGCCCACTTTTTGAAGAAGAGGACACTGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: FALSCLTGVSSFQWS*GKAGPLFEEEDTGG Trigger: ACCACCAGTGTCCTCTTCTTCAAAAAGTGGGCCAGCCTTCCCTCATGACCACTGGAAGGAAGAAACACCAGTAAGACATGAAAGGGCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000167458.9 ENSMUST00000172314.9 ENSMUST00000175686.8 ENSMUST00000176084.2 ENSMUST00000176103.8 ENSMUST00000176520.8 |
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| CDS CCA 90 bp | CAAATTCTCATTACACTGCAGCAACTCCAGCGAGTCACTCATCCCTaGTGCTCTCTTGTCCATCACCAGCAGGAGTTTCTGTACTGCATT | + |
|
Preference number: 5 (lower is better) Translates to: QILITLQQLQRVTHP*CSLVHHQQEFLYCI Trigger: AATGCAGTACAGAAACTCCTGCTGGTGATGGACAAGAGAGCACCAGGGATGAGTGACTCGCTGGAGTTGCTGCAGTGTAATGAGAATTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000167458.9 ENSMUST00000172314.9 ENSMUST00000175686.8 ENSMUST00000176084.2 ENSMUST00000176103.8 ENSMUST00000176520.8 |
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| CDS-3UTR CAA 90 bp | ATGTTATGTTGTCTCTTGGCACTGGCCAGACTAGAAGCAACTGTGTTTGGCAGATGCTCATCACAGGAGTaGTATCCTGGAGAGGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: MLCCLLALARLEATVFGRCSSQE*YPGEDG Trigger: GCCATCCTCTCCAGGATACAACTCCTGTGATGAGCA...TCTGCCAAACACAGTTGCTTCTAGTCTGGCCAGTGCCAAGAGACAACATAACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| CDS-3UTR CAA 90 bp | GTGCAAGTGGTGCACTGCAGTAAGTGCAAAGTCTGCCCCACCAGAGACACACTGAAAGTCTTCCACATCTaGCCATTCCTTATTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VQVVHCSKCKVCPTRDTLKVFHI*PFLIAF Trigger: GAAAGCAATAAGGAATGGCAAGATGTGGAAGACTTT...CAGTGTGTCTCTGGTGGGGCAGACTTTGCACTTACTGCAGTGCACCACTTGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| CDS-3UTR CAA 90 bp | AGTAAAGTGCAAGTGGTGCACTGCAGTAAGTGCAAAGTCTGCCCCACCAGAGACCTTGTGAGTGCCCATTaGGATCTCTTCCTCATTATC | + |
|
Preference number: 5 (lower is better) Translates to: SKVQVVHCSKCKVCPTRDLVSAH*DLFLII Trigger: GATAATGAGGAAGAGATCCAAATGGGCACTCACAAG...GTCTCTGGTGGGGCAGACTTTGCACTTACTGCAGTGCACCACTTGCACTTTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| CDS-3UTR CAA 90 bp | GTGCAAGTGGTGCACTGCAGTAAGTGCAAAGTCTGCCCCACCAGAGACACACTGGCATTCATTGGTCTTTaGCACTTATTAGGAGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: VQVVHCSKCKVCPTRDTLAFIGL*HLLGEV Trigger: CACTTCTCCTAATAAGTGCAAAAGACCAATGAATGC...CAGTGTGTCTCTGGTGGGGCAGACTTTGCACTTACTGCAGTGCACCACTTGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| CDS GCA 90 bp | CATCCCTGGTGCTCTCTTGTCCATCACCAGCAGGAGTTTCTGTACTaGATTAGGCATCTGATTTGTCTTCACTTCCCACACCATGTTATG | + |
|
Preference number: 5 (lower is better) Translates to: HPWCSLVHHQQEFLY*IRHLICLHFPHHVM Trigger: CATAACATGGTGTGGGAAGTGAAGACAAATCAGATGCCTAATGCAGTACAGAAACTCCTGCTGGTGATGGACAAGAGAGCACCAGGGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000167458.9 ENSMUST00000172314.9 ENSMUST00000175686.8 ENSMUST00000176103.8 |
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| CDS-3UTR CAA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCATCCCTGGTGCTCTCTaGTCCATCACCAGCAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: NRACYFFWGFPFFDCFVSIPGAL*SITSRS Trigger: ACTCCTGCTGGTGATGGACAAGAGAGCACCAGGGAT...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
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| CDS-3UTR CAA 90 bp | ACAAACGACACTGAAGGAGTTTATTTTGCAGGCACAGTTACTGTGAACTGCCCTTGCTCATCACAGGAGTaGTATCCTGGAGAGGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: TNDTEGVYFAGTVTVNCPCSSQE*YPGEDG Trigger: GCCATCCTCTCCAGGATACAACTCCTGTGATGAGCA...AGGGCAGTTCACAGTAACTGTGCCTGCAAAATAAACTCCTTCAGTGTCGTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
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| CDS-3UTR CAA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCGTGGATGGCCAGGAATaGCACCAGCCCAGATCATCA | + |
|
Preference number: 5 (lower is better) Translates to: NRACYFFWGFPFFDCFVSVDGQE*HQPRSS Trigger: TGATGATCTGGGCTGGTGCAATTCCTGGCCATCCAC...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
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| CDS-3UTR CAA 90 bp | ACAAACGACACTGAAGGAGTTTATTTTGCAGGCACAGTTACTGTGAACTGCCCTTTGGGTAGGGTCACTTaGAACAGCCTGAAGTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TNDTEGVYFAGTVTVNCPLGRVT*NSLKFR Trigger: CCTGAACTTCAGGCTGTTCAAAGTGACCCTACCCAA...AGGGCAGTTCACAGTAACTGTGCCTGCAAAATAAACTCCTTCAGTGTCGTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
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| CDS-3UTR CAA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCAGGCTGGCCCACTTTTaGAAGAAGAGGACACTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: NRACYFFWGFPFFDCFVSRLAHF*KKRTLV Trigger: CACCAGTGTCCTCTTCTTCAAAAAGTGGGCCAGCCT...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
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| CDS-3UTR CAA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCAAAGGGTGGTCCAGCTaGCACTCTACAGTGAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: NRACYFFWGFPFFDCFVSKGWSS*HSTVSK Trigger: CTTGCTCACTGTAGAGTGCAAGCTGGACCACCCTTT...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
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| CDS-3UTR CAA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCTTGGGTAGGGTCACTTaGAACAGCCTGAAGTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NRACYFFWGFPFFDCFVSLGRVT*NSLKFR Trigger: CCTGAACTTCAGGCTGTTCAAAGTGACCCTACCCAA...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
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| CDS TCA 90 bp | TTAATGGCATCAGGGTGTCCAGGAGGTAGACATACGTCACCAATATaGATTTCACAACATGGAATGCCATGCTGTACCACAGTCAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LMASGCPGGRHTSPI*ISQHGMPCCTTVKL Trigger: AAGCTTGACTGTGGTACAGCATGGCATTCCATGTTGTGAAATTCATATTGGTGACGTATGTCTACCTCCTGGACACCCTGATGCCATTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000167458.9 ENSMUST00000172314.9 ENSMUST00000175686.8 ENSMUST00000176643.8 |
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| CDS CCA 90 bp | CTTTTGCACTTATTAGGAGAAGTGGCACTCACAGTCCCTGAGCTGTaGCTTTTGACAGCTTTAGCATACAAAGAACTAGAAGAGAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LLHLLGEVALTVPEL*LLTALAYKELEESC Trigger: ACAGCTCTCTTCTAGTTCTTTGTATGCTAAAGCTGTCAAAAGCCACAGCTCAGGGACTGTGAGTGCCACTTCTCCTAATAAGTGCAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167458.9 ENSMUST00000172314.9 |
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| CDS-3UTR CAA 90 bp | AAACCCAAACTGGTTTTTGATTTGGAAAAAGGTCCATTTGACTCATTTCCCGTTATCCCTGGTGCTCTCTaGTCCATCACCAGCAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: KPKLVFDLEKGPFDSFPVIPGAL*SITSRS Trigger: ACTCCTGCTGGTGATGGACAAGAGAGCACCAGGGAT...AACGGGAAATGAGTCAAATGGACCTTTTTCCAAATCAAAAACCAGTTTGGGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
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| CDS-3UTR CAA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCCTGGTATATGGCAGATaGGGTAGGGTCACTTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: NRACYFFWGFPFFDCFVSLVYGR*GRVTLN Trigger: GTTCAAAGTGACCCTACCCAATCTGCCATATACCAG...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
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| CDS-3UTR CAA 90 bp | GGCTATTCTGTACAAACACATCAACTCTTAAAGATGCACTTGGAATGCAAAGCTAAAGGGTGGTCCAGCTaGCACTCTACAGTGAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GYSVQTHQLLKMHLECKAKGWSS*HSTVSK Trigger: CTTGCTCACTGTAGAGTGCAAGCTGGACCACCCTTT...AGCTTTGCATTCCAAGTGCATCTTTAAGAGTTGATGTGTTTGTACAGAATAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
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| CDS TCA 90 bp | GCAATATTTGCTAACTCTGTTAGCCAGTCCACCTCATCTTCACGGTaGGTATTTTCCGGTATATCTGAGGTATTCTGGCTCCAAGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: AIFANSVSQSTSSSR*VFSGISEVFWLQDD Trigger: ATCATCTTGGAGCCAGAATACCTCAGATATACCGGAAAATACTCACCGTGAAGATGAGGTGGACTGGCTAACAGAGTTAGCAAATATTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000167458.9 ENSMUST00000172314.9 ENSMUST00000175686.8 ENSMUST00000176084.2 ENSMUST00000176103.8 ENSMUST00000176520.8 |
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| CDS TCA 90 bp | CATTGGTCTTTTGCACTTATTAGGAGAAGTGGCACTCACAGTCCCTaGGCTGTGGCTTTTGACAGCTTTAGCATACAAAGAACTAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: HWSFALIRRSGTHSP*AVAFDSFSIQRTRR Trigger: TCTTCTAGTTCTTTGTATGCTAAAGCTGTCAAAAGCCACAGCTCAGGGACTGTGAGTGCCACTTCTCCTAATAAGTGCAAAAGACCAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167458.9 ENSMUST00000172314.9 |
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| CDS-3UTR CAA 90 bp | AAACCCAAACTGGTTTTTGATTTGGAAAAAGGTCCATTTGACTCATTTCCCGTTAGGCTGGCCCACTTTTaGAAGAAGAGGACACTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: KPKLVFDLEKGPFDSFPVRLAHF*KKRTLV Trigger: CACCAGTGTCCTCTTCTTCAAAAAGTGGGCCAGCCT...AACGGGAAATGAGTCAAATGGACCTTTTTCCAAATCAAAAACCAGTTTGGGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
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| CDS-3UTR CAA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCCTTGTGAGTGCCCATTaGGATCTCTTCCTCATTATC | + |
|
Preference number: 5 (lower is better) Translates to: NRACYFFWGFPFFDCFVSLVSAH*DLFLII Trigger: GATAATGAGGAAGAGATCCAAATGGGCACTCACAAG...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
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| CDS-3UTR CAA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCGTACCACAGTCAAGCTaGGATAAAATGACGACCAAC | + |
|
Preference number: 5 (lower is better) Translates to: NRACYFFWGFPFFDCFVSVPQSS*DKMTTN Trigger: GTTGGTCGTCATTTTATCCAAGCTTGACTGTGGTAC...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
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| CDS-3UTR CAA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCTCTTGCCATTCCTTATaGCTTTCCTTATGGAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: NRACYFFWGFPFFDCFVSSCHSL*LSLWKH Trigger: GTGCTTCCATAAGGAAAGCAATAAGGAATGGCAAGA...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
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| CDS-3UTR CAA 90 bp | CAAAACTCTCACTTGGTAAGTAACATGAGAAGCCATGATTGTAGCTCAGAGCAAGTACCACAGTCAAGCTaGGATAAAATGACGACCAAC | + |
|
Preference number: 5 (lower is better) Translates to: QNSHLVSNMRSHDCSSEQVPQSS*DKMTTN Trigger: GTTGGTCGTCATTTTATCCAAGCTTGACTGTGGTAC...TTGCTCTGAGCTACAATCATGGCTTCTCATGTTACTTACCAAGTGAGAGTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| CDS-3UTR CAA 90 bp | CAAAACTCTCACTTGGTAAGTAACATGAGAAGCCATGATTGTAGCTCAGAGCAATCTTGCCATTCCTTATaGCTTTCCTTATGGAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: QNSHLVSNMRSHDCSSEQSCHSL*LSLWKH Trigger: GTGCTTCCATAAGGAAAGCAATAAGGAATGGCAAGA...TTGCTCTGAGCTACAATCATGGCTTCTCATGTTACTTACCAAGTGAGAGTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| CDS-3UTR CAA 90 bp | AATAGGGCTTGTTATTTCTTCTGGGGTTTTCCCTTCTTTGACTGCTTCGTATCCAAAGTCTTCCACATCTaGCCATTCCTTATTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: NRACYFFWGFPFFDCFVSKVFHI*PFLIAF Trigger: GAAAGCAATAAGGAATGGCAAGATGTGGAAGACTTT...GGATACGAAGCAGTCAAAGAAGGGAAAACCCCAGAAGAAATAACAAGCCCTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
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| CDS-3UTR CAA 90 bp | TATGCCAACTGGCCTAATAGCTTTCTATATGTCTACATTCTGCCCCTAAGAAAACTTGTGAGTGCCCATTaGGATCTCTTCCTCATTATC | + |
|
Preference number: 5 (lower is better) Translates to: YANWPNSFLYVYILPLRKLVSAH*DLFLII Trigger: GATAATGAGGAAGAGATCCAAATGGGCACTCACAAG...TTTTCTTAGGGGCAGAATGTAGACATATAGAAAGCTATTAGGCCAGTTGGCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
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| CDS-3UTR CAA 90 bp | GGCTATTCTGTACAAACACATCAACTCTTAAAGATGCACTTGGAATGCAAAGCTCCTGAGCTGTGGCTTTaGACAGCTTTAGCATACAAA | + |
|
Preference number: 5 (lower is better) Translates to: GYSVQTHQLLKMHLECKAPELWL*TALAYK Trigger: TTTGTATGCTAAAGCTGTCAAAAGCCACAGCTCAGG...AGCTTTGCATTCCAAGTGCATCTTTAAGAGTTGATGTGTTTGTACAGAATAGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| CDS-3UTR CAA 90 bp | TTCAACCTCATTAATGTATATGCCAACTGGCCTAATAGCTTTCTATATGTCTACCTGGTATATGGCAGATaGGGTAGGGTCACTTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: FNLINVYANWPNSFLYVYLVYGR*GRVTLN Trigger: GTTCAAAGTGACCCTACCCAATCTGCCATATACCAG...GTAGACATATAGAAAGCTATTAGGCCAGTTGGCATATACATTAATGAGGTTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| CDS-3UTR CAA 90 bp | GGCTATTCTGTACAAACACATCAACTCTTAAAGATGCACTTGGAATGCAAAGCTTCTTGCCATTCCTTATaGCTTTCCTTATGGAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GYSVQTHQLLKMHLECKASCHSL*LSLWKH Trigger: GTGCTTCCATAAGGAAAGCAATAAGGAATGGCAAGA...AGCTTTGCATTCCAAGTGCATCTTTAAGAGTTGATGTGTTTGTACAGAATAGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| CDS-3UTR CAA 90 bp | AGGACAAGGCTATTCTGTACAAACACATCAACTCTTAAAGATGCACTTGGAATGAAAGTCTTCCACATCTaGCCATTCCTTATTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RTRLFCTNTSTLKDALGMKVFHI*PFLIAF Trigger: GAAAGCAATAAGGAATGGCAAGATGTGGAAGACTTT...CATTCCAAGTGCATCTTTAAGAGTTGATGTGTTTGTACAGAATAGCCTTGTCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| CDS-3UTR CAA 90 bp | TTCAACCTCATTAATGTATATGCCAACTGGCCTAATAGCTTTCTATATGTCTACGTACCACAGTCAAGCTaGGATAAAATGACGACCAAC | + |
|
Preference number: 5 (lower is better) Translates to: FNLINVYANWPNSFLYVYVPQSS*DKMTTN Trigger: GTTGGTCGTCATTTTATCCAAGCTTGACTGTGGTAC...GTAGACATATAGAAAGCTATTAGGCCAGTTGGCATATACATTAATGAGGTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| CDS-3UTR CAA 90 bp | AGGACAAGGCTATTCTGTACAAACACATCAACTCTTAAAGATGCACTTGGAATGGCATTCATTGGTCTTTaGCACTTATTAGGAGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RTRLFCTNTSTLKDALGMAFIGL*HLLGEV Trigger: CACTTCTCCTAATAAGTGCAAAAGACCAATGAATGC...CATTCCAAGTGCATCTTTAAGAGTTGATGTGTTTGTACAGAATAGCCTTGTCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167458.9 |
||
| CDS GCA 72 bp | TTATGGAAGCACAGCCGCGTGCCTTTCAGAAAGCAGTaGCAAATGGTGGATGGCCAGGAATTGCACCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: LWKHSRVPFRKQ*QMVDGQELHQP Trigger: GGGCTGGTGCAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTGAAAGGCACGCGGCTGTGCTTCCATAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000167458.9 ENSMUST00000172314.9 ENSMUST00000175686.8 ENSMUST00000176084.2 ENSMUST00000176103.8 ENSMUST00000176520.8 |
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| CDS CCA 72 bp | AGCACAGCCGCGTGCCTTTCAGAAAGCAGTGCCAAATaGTGGATGGCCAGGAATTGCACCAGCCCAGATCAT | + |
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Preference number: 6 (lower is better) Translates to: STAACLSESSAK*WMARNCTSPDH Trigger: ATGATCTGGGCTGGTGCAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTGAAAGGCACGCGGCTGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000167458.9 ENSMUST00000172314.9 ENSMUST00000175686.8 ENSMUST00000176084.2 ENSMUST00000176103.8 ENSMUST00000176520.8 |
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| CDS CAA 90 bp | CGCGTGCCTTTCAGAAAGCAGTGCCAAATGGTGGATGGCCAGGAATaGCACCAGCCCAGATCATCATCATCTGACAGGGAGGACATACAG | + |
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Preference number: 6 (lower is better) Translates to: RVPFRKQCQMVDGQE*HQPRSSSSDREDIQ Trigger: CTGTATGTCCTCCCTGTCAGATGATGATGATCTGGGCTGGTGCAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTGAAAGGCACGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000167458.9 ENSMUST00000172314.9 ENSMUST00000175686.8 ENSMUST00000176084.2 ENSMUST00000176103.8 ENSMUST00000176520.8 |
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| CDS GCA 72 bp | TCAGAAAGCAGTGCCAAATGGTGGATGGCCAGGAATTaGACCAGCCCAGATCATCATCATCTGACAGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: SESSAKWWMARN*TSPDHHHLTGR Trigger: CCTCCCTGTCAGATGATGATGATCTGGGCTGGTGCAATTCCTGGCCATCCACCATTTGGCACTGCTTTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000167458.9 ENSMUST00000172314.9 ENSMUST00000175686.8 ENSMUST00000176084.2 ENSMUST00000176103.8 ENSMUST00000176520.8 |
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| CDS GCA 72 bp | TTGACCAGTACCAGGTCCTCCTCCACAAGACAGAGATaGACGGCGCTGACGAGCCATACTACTCAAAACATA | + |
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Preference number: 6 (lower is better) Translates to: LTSTRSSSTRQR*TALTSHTTQNI Trigger: TATGTTTTGAGTAGTATGGCTCGTCAGCGCCGTGCATCTCTGTCTTGTGGAGGAGGACCTGGTACTGGTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167458.9 ENSMUST00000172314.9 ENSMUST00000176643.8 |
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| CDS CAA 72 bp | AGCAACTCCAGCGAGTCACTCATCCCTGGTGCTCTCTaGTCCATCACCAGCAGGAGTTTCTGTACTGCATTA | + |
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Preference number: 6 (lower is better) Translates to: SNSSESLIPGAL*SITSRSFCTAL Trigger: TAATGCAGTACAGAAACTCCTGCTGGTGATGGACAAGAGAGCACCAGGGATGAGTGACTCGCTGGAGTTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000167458.9 ENSMUST00000172314.9 ENSMUST00000175686.8 ENSMUST00000176084.2 ENSMUST00000176103.8 ENSMUST00000176520.8 |
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| CDS CAA 90 bp | TTCCTCATTATCACAGCTGGCGGCTCTAGCAAAGTCTTCCACATCTaGCCATTCCTTATTGCTTTCCTTATGGAAGCACAGCCGCGTGCC | + |
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Preference number: 6 (lower is better) Translates to: FLIITAGGSSKVFHI*PFLIAFLMEAQPRA Trigger: GGCACGCGGCTGTGCTTCCATAAGGAAAGCAATAAGGAATGGCAAGATGTGGAAGACTTTGCTAGAGCCGCCAGCTGTGATAATGAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000167458.9 ENSMUST00000172314.9 ENSMUST00000175686.8 ENSMUST00000176103.8 ENSMUST00000176520.8 |
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| CDS GCA 72 bp | TTGTATCCTGGAGAGGATGGCAAATTCTCATTACACTaGAGCAACTCCAGCGAGTCACTCATCCCTGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: LYPGEDGKFSLH*SNSSESLIPGA Trigger: AGCACCAGGGATGAGTGACTCGCTGGAGTTGCTGCAGTGTAATGAGAATTTGCCATCCTCTCCAGGATACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000167458.9 ENSMUST00000172314.9 ENSMUST00000175686.8 ENSMUST00000176084.2 ENSMUST00000176103.8 ENSMUST00000176520.8 |
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| CDS TCA 72 bp | TCATGTCTTACTGGTGTTTCTTCCTTCCAGTGGTCATaGGGGAAGGCTGGCCCACTTTTTGAAGAAGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: SCLTGVSSFQWS*GKAGPLFEEED Trigger: GTCCTCTTCTTCAAAAAGTGGGCCAGCCTTCCCTCATGACCACTGGAAGGAAGAAACACCAGTAAGACATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000167458.9 ENSMUST00000172314.9 ENSMUST00000175686.8 ENSMUST00000176084.2 ENSMUST00000176103.8 ENSMUST00000176520.8 ENSMUST00000176643.8 |
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| CDS CAA 72 bp | GCTCTAGCAAAGTCTTCCACATCTTGCCATTCCTTATaGCTTTCCTTATGGAAGCACAGCCGCGTGCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: ALAKSSTSCHSL*LSLWKHSRVPF Trigger: GAAAGGCACGCGGCTGTGCTTCCATAAGGAAAGCAATAAGGAATGGCAAGATGTGGAAGACTTTGCTAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000167458.9 ENSMUST00000172314.9 ENSMUST00000175686.8 ENSMUST00000176103.8 ENSMUST00000176520.8 |
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| CDS CAA 72 bp | GGAGAAGTGGCACTCACAGTCCCTGAGCTGTGGCTTTaGACAGCTTTAGCATACAAAGAACTAGAAGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: GEVALTVPELWL*TALAYKELEES Trigger: GCTCTCTTCTAGTTCTTTGTATGCTAAAGCTGTCAAAAGCCACAGCTCAGGGACTGTGAGTGCCACTTCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167458.9 ENSMUST00000172314.9 |
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| CDS TCA 72 bp | GCTAACTCTGTTAGCCAGTCCACCTCATCTTCACGGTaGGTATTTTCCGGTATATCTGAGGTATTCTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: ANSVSQSTSSSR*VFSGISEVFWL Trigger: GAGCCAGAATACCTCAGATATACCGGAAAATACTCACCGTGAAGATGAGGTGGACTGGCTAACAGAGTTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000167458.9 ENSMUST00000172314.9 ENSMUST00000175686.8 ENSMUST00000176084.2 ENSMUST00000176103.8 ENSMUST00000176520.8 ENSMUST00000176643.8 |
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| CDS CAA 72 bp | ATCACAGCTGGCGGCTCTAGCAAAGTCTTCCACATCTaGCCATTCCTTATTGCTTTCCTTATGGAAGCACAG | + |
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Preference number: 6 (lower is better) Translates to: ITAGGSSKVFHI*PFLIAFLMEAQ Trigger: CTGTGCTTCCATAAGGAAAGCAATAAGGAATGGCAAGATGTGGAAGACTTTGCTAGAGCCGCCAGCTGTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000167458.9 ENSMUST00000172314.9 ENSMUST00000175686.8 ENSMUST00000176103.8 ENSMUST00000176520.8 |
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| CDS CAA 72 bp | ACCACAGCTTTTACTGAATTCAGATCCCGAAAACTCTaGACCAGTACCAGGTCCTCCTCCACAAGACAGAGA | + |
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Preference number: 6 (lower is better) Translates to: TTAFTEFRSRKL*TSTRSSSTRQR Trigger: TCTCTGTCTTGTGGAGGAGGACCTGGTACTGGTCAAGAGTTTTCGGGATCTGAATTCAGTAAAAGCTGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000167458.9 ENSMUST00000172314.9 ENSMUST00000176643.8 |
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| CDS TCA 72 bp | TCAGGGTGTCCAGGAGGTAGACATACGTCACCAATATaGATTTCACAACATGGAATGCCATGCTGTACCACA | + |
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Preference number: 6 (lower is better) Translates to: SGCPGGRHTSPI*ISQHGMPCCTT Trigger: TGTGGTACAGCATGGCATTCCATGTTGTGAAATTCATATTGGTGACGTATGTCTACCTCCTGGACACCCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000167458.9 ENSMUST00000172314.9 ENSMUST00000175686.8 ENSMUST00000176643.8 |
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| CDS TCA 72 bp | AGAGCTGTGATGATCCAGGTGAACCACAGCTTTTACTaGATTCAGATCCCGAAAACTCTTGACCAGTACCAG | + |
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Preference number: 6 (lower is better) Translates to: RAVMIQVNHSFY*IQIPKTLDQYQ Trigger: CTGGTACTGGTCAAGAGTTTTCGGGATCTGAATTCAGTAAAAGCTGTGGTTCACCTGGATCATCACAGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000167458.9 ENSMUST00000172314.9 ENSMUST00000176643.8 |
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| CDS CAA 90 bp | CACTTATTAGGAGAAGTGGCACTCACAGTCCCTGAGCTGTGGCTTTaGACAGCTTTAGCATACAAAGAACTAGAAGAGAGCTGTGATGAT | + |
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Preference number: 6 (lower is better) Translates to: HLLGEVALTVPELWL*TALAYKELEESCDD Trigger: ATCATCACAGCTCTCTTCTAGTTCTTTGTATGCTAAAGCTGTCAAAAGCCACAGCTCAGGGACTGTGAGTGCCACTTCTCCTAATAAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167458.9 ENSMUST00000172314.9 |
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| CDS TCA 72 bp | TTTGCACTTATTAGGAGAAGTGGCACTCACAGTCCCTaGGCTGTGGCTTTTGACAGCTTTAGCATACAAAGA | + |
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Preference number: 6 (lower is better) Translates to: FALIRRSGTHSP*AVAFDSFSIQR Trigger: TCTTTGTATGCTAAAGCTGTCAAAAGCCACAGCTCAGGGACTGTGAGTGCCACTTCTCCTAATAAGTGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167458.9 ENSMUST00000172314.9 |
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| CDS CAA 72 bp | CCGGTATATCTGAGGTATTCTGGCTCCAAGATGATCTaGGATATTCTTGATGAGATACATCTGAACTTAGCT | + |
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Preference number: 6 (lower is better) Translates to: PVYLRYSGSKMI*DILDEIHLNLA Trigger: AGCTAAGTTCAGATGTATCTCATCAAGAATATCCAAGATCATCTTGGAGCCAGAATACCTCAGATATACCGG 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000167458.9 ENSMUST00000172314.9 ENSMUST00000175686.8 ENSMUST00000176084.2 ENSMUST00000176103.8 ENSMUST00000176520.8 |
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| CDS CAA 72 bp | CAGGATTTAAACGCTTTTGTTCTTCAGCCAAAGCCTTaGCTTCTAATGTGTACATCCTCCTTTCTTCGTTCT | + |
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Preference number: 6 (lower is better) Translates to: QDLNAFVLQPKP*LLMCTSSFLRS Trigger: AGAACGAAGAAAGGAGGATGTACACATTAGAAGCAAAGGCTTTGGCTGAAGAACAAAAGCGTTTAAATCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172314.9 |
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| CDS CAA 90 bp | GAGTATTTTCCGGTATATCTGAGGTATTCTGGCTCCAAGATGATCTaGGATATTCTTGATGAGATACATCTGAACTTAGCTGGTATATGG | + |
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Preference number: 6 (lower is better) Translates to: EYFPVYLRYSGSKMI*DILDEIHLNLAGIW Trigger: CCATATACCAGCTAAGTTCAGATGTATCTCATCAAGAATATCCAAGATCATCTTGGAGCCAGAATACCTCAGATATACCGGAAAATACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000167458.9 ENSMUST00000172314.9 ENSMUST00000175686.8 ENSMUST00000176084.2 ENSMUST00000176103.8 ENSMUST00000176520.8 |
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| CDS TCA 72 bp | TGTGAAGTCATAGCTTTTAAATGTATCAAAAACACCTaGATCATCGAAATTAATGGCATCAGGGTGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: CEVIAFKCIKNT*IIEINGIRVSR Trigger: CCTGGACACCCTGATGCCATTAATTTCGATGATTCAGGTGTTTTTGATACATTTAAAAGCTATGACTTCACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000167458.9 ENSMUST00000172314.9 ENSMUST00000176643.8 |
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| CDS TCA 72 bp | ATATTGATATGGCCTTTTAAATGTATCAAAAACACCTaGATCATCGAAATTAATGGCATCAGGGTGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: ILIWPFKCIKNT*IIEINGIRVSR Trigger: CCTGGACACCCTGATGCCATTAATTTCGATGATTCAGGTGTTTTTGATACATTTAAAAGGCCATATCAATAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175686.8 |
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