Pregenerated sensors for HBEGF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024486Ensembl transcript IDs: ENSMUST00000025363.7
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | GAGGACCAGGAAGGCCTGAAGGGCTCACTCGATCCTGCTTTCTTCTaGTCCGGATCCCAGCGGGCATGGTCTGTTTGGCACTTAGAGGCT | + |
Preference number: 1 (lower is better) Translates to: EDQEGLKGSLDPAFF*SGSQRAWSVWHLEA Trigger: AGCCTCTAAGTGCCAAACAGACCATGCCCGCTGGGATCCGGATCAGAAGAAAGCAGGATCGAGTGAGCCCTTCAGGCCTTCCTGGTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR GCA 90 bp | TTCAATGGAGGAGGACCAGGAAGGCCTGAAGGGCTCACTCGATCCTaGTTTCTTCTGATCCGGATCCCAGCGGGCATGGTCTGTTTGGCA | + |
Preference number: 1 (lower is better) Translates to: FNGGGPGRPEGLTRS*FLLIRIPAGMVCLA Trigger: TGCCAAACAGACCATGCCCGCTGGGATCCGGATCAGAAGAAAGCAGGATCGAGTGAGCCCTTCAGGCCTTCCTGGTCCTCCTCCATTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR GCA 90 bp | GGCTTTCGGAACACGAACGGTAGACAAAAATCACCTAGGCAAGACTaGAGTCCAACTCACAGAGTGGCTCCGCCCAAACCGATCCCTGCA | + |
Preference number: 1 (lower is better) Translates to: GFRNTNGRQKSPRQD*SPTHRVAPPKPIPA Trigger: TGCAGGGATCGGTTTGGGCGGAGCCACTCTGTGAGTTGGACTGCAGTCTTGCCTAGGTGATTTTTGTCTACCGTTCGTGTTCCGAAAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR CCA 90 bp | GTAGACAAAAATCACCTAGGCAAGACTGCAGTCCAACTCACAGAGTaGCTCCGCCCAAACCGATCCCTGCACTCTGACCATACACAACCT | + |
Preference number: 1 (lower is better) Translates to: VDKNHLGKTAVQLTE*LRPNRSLHSDHTQP Trigger: AGGTTGTGTATGGTCAGAGTGCAGGGATCGGTTTGGGCGGAGCCACTCTGTGAGTTGGACTGCAGTCTTGCCTAGGTGATTTTTGTCTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR CCA 90 bp | TCCGCCCAAACCGATCCCTGCACTCTGACCATACACAACCTACCCTaGGATATTCTGCTCCAGGGACATCTTCTGAAATGTAGACAGACA | + |
Preference number: 1 (lower is better) Translates to: SAQTDPCTLTIHNLP*DILLQGHLLKCRQT Trigger: TGTCTGTCTACATTTCAGAAGATGTCCCTGGAGCAGAATATCCCAGGGTAGGTTGTGTATGGTCAGAGTGCAGGGATCGGTTTGGGCGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR GCA 90 bp | TTCTCGAGCTTGCGGTATTTCACAGTTAGTTCATCAAATCCAGCGTaGTGGAGGGTCCAAACAGCAGATCCCTTGCGGCTACTTGAACAC | + |
Preference number: 1 (lower is better) Translates to: FSSLRYFTVSSSNPA*WRVQTADPLRLLEH Trigger: GTGTTCAAGTAGCCGCAAGGGATCTGCTGTTTGGACCCTCCAGCACGCTGGATTTGATGAACTAACTGTGAAATACCGCAAGCTCGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR CCA 90 bp | TCGAGCTTGCGGTATTTCACAGTTAGTTCATCAAATCCAGCGTGCTaGAGGGTCCAAACAGCAGATCCCTTGCGGCTACTTGAACACATA | + |
Preference number: 1 (lower is better) Translates to: SSLRYFTVSSSNPAC*RVQTADPLRLLEHI Trigger: TATGTGTTCAAGTAGCCGCAAGGGATCTGCTGTTTGGACCCTCCAGCACGCTGGATTTGATGAACTAACTGTGAAATACCGCAAGCTCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR TCA 90 bp | CCTTCCCTCCCACCAACCTTCCCTATAGTAATTGATAGGTATCAATaGCCAAGAATAGTCAACTCCAAAGCTCCCTGCTCTTCCTCAGCC | + |
Preference number: 1 (lower is better) Translates to: PSLPPTFPIVIDRYQ*PRIVNSKAPCSSSA Trigger: GGCTGAGGAAGAGCAGGGAGCTTTGGAGTTGACTATTCTTGGTCATTGATACCTATCAATTACTATAGGGAAGGTTGGTGGGAGGGAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR GCA 90 bp | GCAGATCCCTTGCGGCTACTTGAACACATAGCTTCTCAGCTCTGTTaGTCTCTTCCAGTCCATAAACCATTTAACCTTCCTCTCCTTTTT | + |
Preference number: 1 (lower is better) Translates to: ADPLRLLEHIASQLC*SLPVHKPFNLPLLF Trigger: AAAAAGGAGAGGAAGGTTAAATGGTTTATGGACTGGAAGAGAGCAACAGAGCTGAGAAGCTATGTGTTCAAGTAGCCGCAAGGGATCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR CCA 90 bp | CAGGGACATCTTCTGAAATGTAGACAGACAATAAATTACTACCGATaGGTTACAGAGCAAATAGGACCCAGCGTGGCATTGAGCCAGATG | + |
Preference number: 1 (lower is better) Translates to: QGHLLKCRQTINYYR*VTEQIGPSVALSQM Trigger: CATCTGGCTCAATGCCACGCTGGGTCCTATTTGCTCTGTAACCCATCGGTAGTAATTTATTGTCTGTCTACATTTCAGAAGATGTCCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR CCA 90 bp | ACACAGGCAAACACCAATATCTATTACACGCTAACATCAGCACCTTaGGCTTTCGGAACACGAACGGTAGACAAAAATCACCTAGGCAAG | + |
Preference number: 1 (lower is better) Translates to: TQANTNIYYTLTSAP*AFGTRTVDKNHLGK Trigger: CTTGCCTAGGTGATTTTTGTCTACCGTTCGTGTTCCGAAAGCCCAAGGTGCTGATGTTAGCGTGTAATAGATATTGGTGTTTGCCTGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR-3UTR CCA 90 bp | GGTTACAGAGCAAATAGGACCCAGCGTGGCATTGAGCCAGATGGTGGAGCGCAGGGATCCCAGCGGGCATaGTCTGTTTGGCACTTAGAG | + |
Preference number: 2 (lower is better) Translates to: GYRANRTQRGIEPDGGAQGSQRA*SVWHLE Trigger: CTCTAAGTGCCAAACAGACCATGCCCGCTGGGATCC...CTGCGCTCCACCATCTGGCTCAATGCCACGCTGGGTCCTATTTGCTCTGTAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR-3UTR CCA 90 bp | ATTGAGCCAGATGGTGGAGCGCAGAGAAGTGGGCCAGGACATTGCCAAAGTAACAACCAGTGGGTTCAATaGAGGAGGACCAGGAAGGCC | + |
Preference number: 2 (lower is better) Translates to: IEPDGGAQRSGPGHCQSNNQWVQ*RRTRKA Trigger: GGCCTTCCTGGTCCTCCTCCATTGAACCCACTGGTT...GTTACTTTGGCAATGTCCTGGCCCACTTCTCTGCGCTCCACCATCTGGCTCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR-3UTR CCA 90 bp | CAACCCCTGCACGAAGTAGCACCCGAAGAACAGCAGGATAAGGGAAATGTCTTGGGACCAGGAAGCCCATaGACTTCCTGCAGGCATGGA | + |
Preference number: 2 (lower is better) Translates to: QPLHEVAPEEQQDKGNVLGPGSP*TSCRHG Trigger: TCCATGCCTGCAGGAAGTCCATGGGCTTCCTGGTCC...CAAGACATTTCCCTTATCCTGCTGTTCTTCGGGTGCTACTTCGTGCAGGGGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR-3UTR TCA 90 bp | CGGTATTTCACAGTTAGTTCATCAAATCCAGCGTGCTGGAGGGTCCAAACAGCAAGGACCAGGAAGGCCTaGAGGGCTCACTCGATCCTG | + |
Preference number: 2 (lower is better) Translates to: RYFTVSSSNPACWRVQTARTRKA*RAHSIL Trigger: CAGGATCGAGTGAGCCCTTCAGGCCTTCCTGGTCCT...TGCTGTTTGGACCCTCCAGCACGCTGGATTTGATGAACTAACTGTGAAATACCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR-3UTR GCA 90 bp | TGGCTCCGCCCAAACCGATCCCTGCACTCTGACCATACACAACCTACCCTGGGAGCTTCTCAGCTCTGTTaGTCTCTTCCAGTCCATAAA | + |
Preference number: 2 (lower is better) Translates to: WLRPNRSLHSDHTQPTLGASQLC*SLPVHK Trigger: TTTATGGACTGGAAGAGAGCAACAGAGCTGAGAAGC...TCCCAGGGTAGGTTGTGTATGGTCAGAGTGCAGGGATCGGTTTGGGCGGAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR-3UTR CCA 90 bp | CCAAACCGATCCCTGCACTCTGACCATACACAACCTACCCTGGGATATTCTGCTTGGAGCGCAGAGAAGTaGGCCAGGACATTGCCAAAG | + |
Preference number: 2 (lower is better) Translates to: PNRSLHSDHTQPTLGYSAWSAEK*ARTLPK Trigger: CTTTGGCAATGTCCTGGCCCACTTCTCTGCGCTCCA...AGCAGAATATCCCAGGGTAGGTTGTGTATGGTCAGAGTGCAGGGATCGGTTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR-3UTR CCA 90 bp | TTCTCCAAACTGTCCTGTGCTCTGCCAACCCCTGCACGAAGTAGCACCCGAAGAATACACAACCTACCCTaGGATATTCTGCTCCAGGGA | + |
Preference number: 2 (lower is better) Translates to: FSKLSCALPTPARSSTRRIHNLP*DILLQG Trigger: TCCCTGGAGCAGAATATCCCAGGGTAGGTTGTGTAT...TCTTCGGGTGCTACTTCGTGCAGGGGTTGGCAGAGCACAGGACAGTTTGGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR CAA 90 bp | CCCATGGACTTCCTGCAGGCATGGATGCTCAATCTCTTCTGGGATTaGGCAGGGAGAGGACACAGGCAAACACCAATATCTATTACACGC | + |
Preference number: 2 (lower is better) Translates to: PMDFLQAWMLNLFWD*AGRGHRQTPISITR Trigger: GCGTGTAATAGATATTGGTGTTTGCCTGTGTCCTCTCCCTGCCAAATCCCAGAAGAGATTGAGCATCCATGCCTGCAGGAAGTCCATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR-3UTR TCA 90 bp | GAGAGGACACAGGCAAACACCAATATCTATTACACGCTAACATCAGCACCTTGGGATCCTGCTTTCTTCTaGTCCGGATCCCAGCGGGCA | + |
Preference number: 2 (lower is better) Translates to: ERTQANTNIYYTLTSAPWDPAFF*SGSQRA Trigger: TGCCCGCTGGGATCCGGATCAGAAGAAAGCAGGATC...CCAAGGTGCTGATGTTAGCGTGTAATAGATATTGGTGTTTGCCTGTGTCCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR-3UTR GCA 90 bp | CAAATAGGACCCAGCGTGGCATTGAGCCAGATGGTGGAGCGCAGAGAAGTGGGCAAGAGTTCTCGAGCTTaGGGTATTTCACAGTTAGTT | + |
Preference number: 2 (lower is better) Translates to: QIGPSVALSQMVERREVGKSSRA*GISQLV Trigger: AACTAACTGTGAAATACCGCAAGCTCGAGAACTCTT...GCCCACTTCTCTGCGCTCCACCATCTGGCTCAATGCCACGCTGGGTCCTATTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR-3UTR CCA 90 bp | TCTCGAGCTTGCGGTATTTCACAGTTAGTTCATCAAATCCAGCGTGCTGGAGGGCGGGCATGGTCTGTTTaGCACTTAGAGGCTCTGAGA | + |
Preference number: 2 (lower is better) Translates to: SRACGISQLVHQIQRAGGRAWSV*HLEALR Trigger: TCTCAGAGCCTCTAAGTGCCAAACAGACCATGCCCG...CCCTCCAGCACGCTGGATTTGATGAACTAACTGTGAAATACCGCAAGCTCGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR-3UTR CCA 90 bp | CAAATAGGACCCAGCGTGGCATTGAGCCAGATGGTGGAGCGCAGAGAAGTGGGCTCCAGTCAAAAATCCTaGAGCATATGGAAACTAGCT | + |
Preference number: 2 (lower is better) Translates to: QIGPSVALSQMVERREVGSSQKS*SIWKLA Trigger: AGCTAGTTTCCATATGCTCCAGGATTTTTGACTGGA...GCCCACTTCTCTGCGCTCCACCATCTGGCTCAATGCCACGCTGGGTCCTATTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR CAA 90 bp | AGTTCATCAAATCCAGCGTGCTGGAGGGTCCAAACAGCAGATCCCTaGCGGCTACTTGAACACATAGCTTCTCAGCTCTGTTGCTCTCTT | + |
Preference number: 2 (lower is better) Translates to: SSSNPACWRVQTADP*RLLEHIASQLCCSL Trigger: AAGAGAGCAACAGAGCTGAGAAGCTATGTGTTCAAGTAGCCGCAAGGGATCTGCTGTTTGGACCCTCCAGCACGCTGGATTTGATGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR-3UTR GCA 90 bp | GAGGACACAGGCAAACACCAATATCTATTACACGCTAACATCAGCACCTTGGGCTCATCAAATCCAGCGTaGTGGAGGGTCCAAACAGCA | + |
Preference number: 2 (lower is better) Translates to: EDTGKHQYLLHANISTLGSSNPA*WRVQTA Trigger: TGCTGTTTGGACCCTCCAGCACGCTGGATTTGATGA...GCCCAAGGTGCTGATGTTAGCGTGTAATAGATATTGGTGTTTGCCTGTGTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR-3UTR CCA 90 bp | ACTCGATCCTGCTTTCTTCTGATCCGGATCCCAGCGGGCATGGTCTGTTTGGCAATGAAGACGTTTTCATaGCTGCTGGTGAAATATTTC | + |
Preference number: 2 (lower is better) Translates to: TRSCFLLIRIPAGMVCLAMKTFS*LLVKYF Trigger: GAAATATTTCACCAGCAGCCATGAAAACGTCTTCAT...TGCCAAACAGACCATGCCCGCTGGGATCCGGATCAGAAGAAAGCAGGATCGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR-3UTR TCA 90 bp | CCAAACCGATCCCTGCACTCTGACCATACACAACCTACCCTGGGATATTCTGCTTTTCATGGCTGCTGGTaGAATATTTCTCCTCTATGT | + |
Preference number: 2 (lower is better) Translates to: PNRSLHSDHTQPTLGYSAFHGCW*NISPLC Trigger: ACATAGAGGAGAAATATTTCACCAGCAGCCATGAAA...AGCAGAATATCCCAGGGTAGGTTGTGTATGGTCAGAGTGCAGGGATCGGTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR CAA 90 bp | GACACAGGCAAACACCAATATCTATTACACGCTAACATCAGCACCTaGGGCTTTCGGAACACGAACGGTAGACAAAAATCACCTAGGCAA | + |
Preference number: 2 (lower is better) Translates to: DTGKHQYLLHANIST*GFRNTNGRQKSPRQ Trigger: TTGCCTAGGTGATTTTTGTCTACCGTTCGTGTTCCGAAAGCCCAAGGTGCTGATGTTAGCGTGTAATAGATATTGGTGTTTGCCTGTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR TCA 72 bp | GAAGGCCTGAAGGGCTCACTCGATCCTGCTTTCTTCTaGTCCGGATCCCAGCGGGCATGGTCTGTTTGGCAC | + |
Preference number: 3 (lower is better) Translates to: EGLKGSLDPAFF*SGSQRAWSVWH Trigger: GTGCCAAACAGACCATGCCCGCTGGGATCCGGATCAGAAGAAAGCAGGATCGAGTGAGCCCTTCAGGCCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR TCA 72 bp | CACAGAGTGGCTCCGCCCAAACCGATCCCTGCACTCTaGCCATACACAACCTACCCTGGGATATTCTGCTCC | + |
Preference number: 3 (lower is better) Translates to: HRVAPPKPIPAL*PYTTYPGIFCS Trigger: GGAGCAGAATATCCCAGGGTAGGTTGTGTATGGTCAGAGTGCAGGGATCGGTTTGGGCGGAGCCACTCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR GCA 72 bp | GGACCAGGAAGCCCATGGACTTCCTGCAGGCATGGATaGTCAATCTCTTCTGGGATTTGGCAGGGAGAGGAC | + |
Preference number: 3 (lower is better) Translates to: GPGSPWTSCRHG*SISSGIWQGED Trigger: GTCCTCTCCCTGCCAAATCCCAGAAGAGATTGAGCATCCATGCCTGCAGGAAGTCCATGGGCTTCCTGGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR CCA 72 bp | AATCACCTAGGCAAGACTGCAGTCCAACTCACAGAGTaGCTCCGCCCAAACCGATCCCTGCACTCTGACCAT | + |
Preference number: 3 (lower is better) Translates to: NHLGKTAVQLTE*LRPNRSLHSDH Trigger: ATGGTCAGAGTGCAGGGATCGGTTTGGGCGGAGCCACTCTGTGAGTTGGACTGCAGTCTTGCCTAGGTGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR TCA 72 bp | CTGGAGGGTCCAAACAGCAGATCCCTTGCGGCTACTTaGACACATAGCTTCTCAGCTCTGTTGCTCTCTTCC | + |
Preference number: 3 (lower is better) Translates to: LEGPNSRSLAAT*THSFSALLLSS Trigger: GGAAGAGAGCAACAGAGCTGAGAAGCTATGTGTTCAAGTAGCCGCAAGGGATCTGCTGTTTGGACCCTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR GCA 72 bp | AACACGAACGGTAGACAAAAATCACCTAGGCAAGACTaGAGTCCAACTCACAGAGTGGCTCCGCCCAAACCG | + |
Preference number: 3 (lower is better) Translates to: NTNGRQKSPRQD*SPTHRVAPPKP Trigger: CGGTTTGGGCGGAGCCACTCTGTGAGTTGGACTGCAGTCTTGCCTAGGTGATTTTTGTCTACCGTTCGTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR GCA 72 bp | CCTTTACTAATGCCTTCTCCAAACTGTCCTGTGCTCTaGCAACCCCTGCACGAAGTAGCACCCGAAGAACAG | + |
Preference number: 3 (lower is better) Translates to: PLLMPSPNCPVL*QPLHEVAPEEQ Trigger: CTGTTCTTCGGGTGCTACTTCGTGCAGGGGTTGGCAGAGCACAGGACAGTTTGGAGAAGGCATTAGTAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR GCA 72 bp | TTGCGGTATTTCACAGTTAGTTCATCAAATCCAGCGTaGTGGAGGGTCCAAACAGCAGATCCCTTGCGGCTA | + |
Preference number: 3 (lower is better) Translates to: LRYFTVSSSNPA*WRVQTADPLRL Trigger: TAGCCGCAAGGGATCTGCTGTTTGGACCCTCCAGCACGCTGGATTTGATGAACTAACTGTGAAATACCGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR CCA 72 bp | CGGTATTTCACAGTTAGTTCATCAAATCCAGCGTGCTaGAGGGTCCAAACAGCAGATCCCTTGCGGCTACTT | + |
Preference number: 3 (lower is better) Translates to: RYFTVSSSNPAC*RVQTADPLRLL Trigger: AAGTAGCCGCAAGGGATCTGCTGTTTGGACCCTCCAGCACGCTGGATTTGATGAACTAACTGTGAAATACCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR CCA 72 bp | ACCGATCCCTGCACTCTGACCATACACAACCTACCCTaGGATATTCTGCTCCAGGGACATCTTCTGAAATGT | + |
Preference number: 3 (lower is better) Translates to: TDPCTLTIHNLP*DILLQGHLLKC Trigger: ACATTTCAGAAGATGTCCCTGGAGCAGAATATCCCAGGGTAGGTTGTGTATGGTCAGAGTGCAGGGATCGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR GCA 72 bp | GGTAGAAAAGTCCCAAAACTCAAGAGTTCTCGAGCTTaGGGTATTTCACAGTTAGTTCATCAAATCCAGCGT | + |
Preference number: 3 (lower is better) Translates to: GRKVPKLKSSRA*GISQLVHQIQR Trigger: ACGCTGGATTTGATGAACTAACTGTGAAATACCGCAAGCTCGAGAACTCTTGAGTTTTGGGACTTTTCTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR CCA 72 bp | AACACCAATATCTATTACACGCTAACATCAGCACCTTaGGCTTTCGGAACACGAACGGTAGACAAAAATCAC | + |
Preference number: 3 (lower is better) Translates to: NTNIYYTLTSAP*AFGTRTVDKNH Trigger: GTGATTTTTGTCTACCGTTCGTGTTCCGAAAGCCCAAGGTGCTGATGTTAGCGTGTAATAGATATTGGTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS-3UTR GCA 90 bp | ACTCGATCCTGCTTTCTTCTGATCCGGATCCCAGCGGGCATGGTCTGTTTGGCAAGGGTTGCTGGTTGCTaGCGCCAGACCTCTCCGAAG | + |
Preference number: 4 (lower is better) Translates to: TRSCFLLIRIPAGMVCLARVAGC*RQTSPK Trigger: CTTCGGAGAGGTCTGGCGGCAGCAACCAGCAACCCT...TGCCAAACAGACCATGCCCGCTGGGATCCGGATCAGAAGAAAGCAGGATCGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS-3UTR CCA 90 bp | GGTTACAGAGCAAATAGGACCCAGCGTGGCATTGAGCCAGATGGTGGAGCGCAGGGTGGCCAGGCCTTGTaGCTTGGAGGAGAAAGCAAC | + |
Preference number: 4 (lower is better) Translates to: GYRANRTQRGIEPDGGAQGGQAL*LGGESN Trigger: GTTGCTTTCTCCTCCAAGCCACAAGGCCTGGCCACC...CTGCGCTCCACCATCTGGCTCAATGCCACGCTGGGTCCTATTTGCTCTGTAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS-3UTR CCA 90 bp | ACTCGATCCTGCTTTCTTCTGATCCGGATCCCAGCGGGCATGGTCTGTTTGGCAGGTTTGTGGATCCAGTaGGAGGGTCAGGGTTGCTGG | + |
Preference number: 4 (lower is better) Translates to: TRSCFLLIRIPAGMVCLAGLWIQ*EGQGCW Trigger: CCAGCAACCCTGACCCTCCCACTGGATCCACAAACC...TGCCAAACAGACCATGCCCGCTGGGATCCGGATCAGAAGAAAGCAGGATCGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS-3UTR CCA 90 bp | TTCTCCAAACTGTCCTGTGCTCTGCCAACCCCTGCACGAAGTAGCACCCGAAGACCCGTGGGTAGCAGCTaGTTTGTGGATCCAGTGGGA | + |
Preference number: 4 (lower is better) Translates to: FSKLSCALPTPARSSTRRPVGSS*FVDPVG Trigger: TCCCACTGGATCCACAAACCAGCTGCTACCCACGGG...TCTTCGGGTGCTACTTCGTGCAGGGGTTGGCAGAGCACAGGACAGTTTGGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS-3UTR TCA 90 bp | CTGCAGTCCAACTCACAGAGTGGCTCCGCCCAAACCGATCCCTGCACTCTGACCAGTCCTTGTATTTCCTaGGGCATGGGTCTCTCTTCT | + |
Preference number: 4 (lower is better) Translates to: LQSNSQSGSAQTDPCTLTSPCIS*GMGLSS Trigger: AGAAGAGAGACCCATGCCTCAGGAAATACAAGGACT...GGTCAGAGTGCAGGGATCGGTTTGGGCGGAGCCACTCTGTGAGTTGGACTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS-3UTR GCA 90 bp | GGACCAGGAAGCCCATGGACTTCCTGCAGGCATGGATGCTCAATCTCTTCTGGGAACCAGGGAGGCATTTaGAAGAGGGAGTACGGAACT | + |
Preference number: 4 (lower is better) Translates to: GPGSPWTSCRHGCSISSGNQGGI*KREYGT Trigger: AGTTCCGTACTCCCTCTTGCAAATGCCTCCCTGGTT...CCCAGAAGAGATTGAGCATCCATGCCTGCAGGAAGTCCATGGGCTTCCTGGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR CAA 72 bp | AATCCAGCGTGCTGGAGGGTCCAAACAGCAGATCCCTaGCGGCTACTTGAACACATAGCTTCTCAGCTCTGT | + |
Preference number: 4 (lower is better) Translates to: NPACWRVQTADP*RLLEHIASQLC Trigger: ACAGAGCTGAGAAGCTATGTGTTCAAGTAGCCGCAAGGGATCTGCTGTTTGGACCCTCCAGCACGCTGGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS-3UTR GCA 90 bp | CGGTATTTCACAGTTAGTTCATCAAATCCAGCGTGCTGGAGGGTCCAAACAGCACAACGCGGACAACACTaGGGCCAGAAAGAGCTTCAG | + |
Preference number: 4 (lower is better) Translates to: RYFTVSSSNPACWRVQTAQRGQH*GQKELQ Trigger: CTGAAGCTCTTTCTGGCCGCAGTGTTGTCCGCGTTG...TGCTGTTTGGACCCTCCAGCACGCTGGATTTGATGAACTAACTGTGAAATACCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS-3UTR TCA 90 bp | AGGAAGCCCATGGACTTCCTGCAGGCATGGATGCTCAATCTCTTCTGGGATTTGAGGAGAAAGCAACTTTaGAAAGGTTCAGATCTGTCC | + |
Preference number: 4 (lower is better) Translates to: RKPMDFLQAWMLNLFWDLRRKQL*KGSDLS Trigger: GGACAGATCTGAACCTTTTCAAAGTTGCTTTCTCCT...CAAATCCCAGAAGAGATTGAGCATCCATGCCTGCAGGAAGTCCATGGGCTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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3UTR CAA 72 bp | AAACACCAATATCTATTACACGCTAACATCAGCACCTaGGGCTTTCGGAACACGAACGGTAGACAAAAATCA | + |
Preference number: 4 (lower is better) Translates to: KHQYLLHANIST*GFRNTNGRQKS Trigger: TGATTTTTGTCTACCGTTCGTGTTCCGAAAGCCCAAGGTGCTGATGTTAGCGTGTAATAGATATTGGTGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS GCA 90 bp | CAGCTGGTTTGTGGATCCAGTGGGAGGGTCAGGGTTGCTGGTTGCTaGCGCCAGACCTCTCCGAAGCCGCTCCAGACTCTCACCGGTCAC | + |
Preference number: 5 (lower is better) Translates to: QLVCGSSGRVRVAGC*RQTSPKPLQTLTGH Trigger: GTGACCGGTGAGAGTCTGGAGCGGCTTCGGAGAGGTCTGGCGGCAGCAACCAGCAACCCTGACCCTCCCACTGGATCCACAAACCAGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS GCA 90 bp | CCGTGGGTAGCAGCTGGTTTGTGGATCCAGTGGGAGGGTCAGGGTTaGTGGTTGCTGCCGCCAGACCTCTCCGAAGCCGCTCCAGACTCT | + |
Preference number: 5 (lower is better) Translates to: PWVAAGLWIQWEGQG*WLLPPDLSEAAPDS Trigger: AGAGTCTGGAGCGGCTTCGGAGAGGTCTGGCGGCAGCAACCAGCAACCCTGACCCTCCCACTGGATCCACAAACCAGCTGCTACCCACGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS CCA 90 bp | TGGGTAGCAGCTGGTTTGTGGATCCAGTGGGAGGGTCAGGGTTGCTaGTTGCTGCCGCCAGACCTCTCCGAAGCCGCTCCAGACTCTCAC | + |
Preference number: 5 (lower is better) Translates to: WVAAGLWIQWEGQGC*LLPPDLSEAAPDSH Trigger: GTGAGAGTCTGGAGCGGCTTCGGAGAGGTCTGGCGGCAGCAACCAGCAACCCTGACCCTCCCACTGGATCCACAAACCAGCTGCTACCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS CCA 90 bp | GAGCACGATCACCTCCCGTGGGTAGCAGCTGGTTTGTGGATCCAGTaGGAGGGTCAGGGTTGCTGGTTGCTGCCGCCAGACCTCTCCGAA | + |
Preference number: 5 (lower is better) Translates to: EHDHLPWVAAGLWIQ*EGQGCWLLPPDLSE Trigger: TTCGGAGAGGTCTGGCGGCAGCAACCAGCAACCCTGACCCTCCCACTGGATCCACAAACCAGCTGCTACCCACGGGAGGTGATCGTGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS CCA 90 bp | CTGTCCCTTCCAAGTCCTGGACCCCCTGAGCACGATCACCTCCCGTaGGTAGCAGCTGGTTTGTGGATCCAGTGGGAGGGTCAGGGTTGC | + |
Preference number: 5 (lower is better) Translates to: LSLPSPGPPEHDHLP*VAAGLWIQWEGQGC Trigger: GCAACCCTGACCCTCCCACTGGATCCACAAACCAGCTGCTACCCACGGGAGGTGATCGTGCTCAGGGGGTCCAGGACTTGGAAGGGACAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS GCA 90 bp | GAGTCAGCCCATGACACCTGTGTCCGTGGTAACCAGGGAGGCATTTaGAAGAGGGAGTACGGAACTCCTGCAGGTATCTGCACTCCCCGT | + |
Preference number: 5 (lower is better) Translates to: ESAHDTCVRGNQGGI*KREYGTPAGICTPR Trigger: ACGGGGAGTGCAGATACCTGCAGGAGTTCCGTACTCCCTCTTGCAAATGCCTCCCTGGTTACCACGGACACAGGTGTCATGGGCTGACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS-3UTR CAA 90 bp | TCTCGAGCTTGCGGTATTTCACAGTTAGTTCATCAAATCCAGCGTGCTGGAGGGGTGGGAGGGTCAGGGTaGCTGGTTGCTGCCGCCAGA | + |
Preference number: 5 (lower is better) Translates to: SRACGISQLVHQIQRAGGVGGSG*LVAAAR Trigger: TCTGGCGGCAGCAACCAGCAACCCTGACCCTCCCAC...CCCTCCAGCACGCTGGATTTGATGAACTAACTGTGAAATACCGCAAGCTCGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS TCA 90 bp | ACTTTGAAAAGGTTCAGATCTGTCCCTTCCAAGTCCTGGACCCCCTaGGCACGATCACCTCCCGTGGGTAGCAGCTGGTTTGTGGATCCA | + |
Preference number: 5 (lower is better) Translates to: TLKRFRSVPSKSWTP*ARSPPVGSSWFVDP Trigger: TGGATCCACAAACCAGCTGCTACCCACGGGAGGTGATCGTGCTCAGGGGGTCCAGGACTTGGAAGGGACAGATCTGAACCTTTTCAAAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS-3UTR CAA 90 bp | AGGAAGCCCATGGACTTCCTGCAGGCATGGATGCTCAATCTCTTCTGGGATTTGTTCCCATTCCTTTCTTaGCTTGGGGTGGCCAGGCCT | + |
Preference number: 5 (lower is better) Translates to: RKPMDFLQAWMLNLFWDLFPFLS*LGVARP Trigger: AGGCCTGGCCACCCCAAGCAAAGAAAGGAATGGGAA...CAAATCCCAGAAGAGATTGAGCATCCATGCCTGCAGGAAGTCCATGGGCTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS CCA 90 bp | CAGACGGACGACAGTACTACAGCCACCACAGCCAAGACTGTAGTGTaGTCATATGTGTATAGGGGATTCTCCACTGGTAGAGTCAGCCCA | + |
Preference number: 5 (lower is better) Translates to: QTDDSTTATTAKTVV*SYVYRGFSTGRVSP Trigger: TGGGCTGACTCTACCAGTGGAGAATCCCCTATACACATATGACCACACTACAGTCTTGGCTGTGGTGGCTGTAGTACTGTCGTCCGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS-3UTR CAA 90 bp | AAATCCTGGAGCATATGGAAACTAGCTGACACTCTAATCCAGAAGCTAAGTGTTTGGGTAGCAGCTGGTTaGTGGATCCAGTGGGAGGGT | + |
Preference number: 5 (lower is better) Translates to: KSWSIWKLADTLIQKLSVWVAAG*WIQWEG Trigger: ACCCTCCCACTGGATCCACAAACCAGCTGCTACCCA...AACACTTAGCTTCTGGATTAGAGTGTCAGCTAGTTTCCATATGCTCCAGGATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS-3UTR CAA 90 bp | TCTCGAGCTTGCGGTATTTCACAGTTAGTTCATCAAATCCAGCGTGCTGGAGGGGAGGAGAAAGCAACTTaGAAAAGGTTCAGATCTGTC | + |
Preference number: 5 (lower is better) Translates to: SRACGISQLVHQIQRAGGEEKAT*KRFRSV Trigger: GACAGATCTGAACCTTTTCAAAGTTGCTTTCTCCTC...CCCTCCAGCACGCTGGATTTGATGAACTAACTGTGAAATACCGCAAGCTCGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS CAA 90 bp | CCCGTGGGTAGCAGCTGGTTTGTGGATCCAGTGGGAGGGTCAGGGTaGCTGGTTGCTGCCGCCAGACCTCTCCGAAGCCGCTCCAGACTC | + |
Preference number: 6 (lower is better) Translates to: PVGSSWFVDPVGGSG*LVAAARPLRSRSRL Trigger: GAGTCTGGAGCGGCTTCGGAGAGGTCTGGCGGCAGCAACCAGCAACCCTGACCCTCCCACTGGATCCACAAACCAGCTGCTACCCACGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS CAA 90 bp | CCTGGACCCCCTGAGCACGATCACCTCCCGTGGGTAGCAGCTGGTTaGTGGATCCAGTGGGAGGGTCAGGGTTGCTGGTTGCTGCCGCCA | + |
Preference number: 6 (lower is better) Translates to: PGPPEHDHLPWVAAG*WIQWEGQGCWLLPP Trigger: TGGCGGCAGCAACCAGCAACCCTGACCCTCCCACTGGATCCACAAACCAGCTGCTACCCACGGGAGGTGATCGTGCTCAGGGGGTCCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS GCA 72 bp | TGTGGATCCAGTGGGAGGGTCAGGGTTGCTGGTTGCTaGCGCCAGACCTCTCCGAAGCCGCTCCAGACTCTC | + |
Preference number: 6 (lower is better) Translates to: CGSSGRVRVAGC*RQTSPKPLQTL Trigger: GAGAGTCTGGAGCGGCTTCGGAGAGGTCTGGCGGCAGCAACCAGCAACCCTGACCCTCCCACTGGATCCACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS GCA 72 bp | GCAGCTGGTTTGTGGATCCAGTGGGAGGGTCAGGGTTaGTGGTTGCTGCCGCCAGACCTCTCCGAAGCCGCT | + |
Preference number: 6 (lower is better) Translates to: AAGLWIQWEGQG*WLLPPDLSEAA Trigger: AGCGGCTTCGGAGAGGTCTGGCGGCAGCAACCAGCAACCCTGACCCTCCCACTGGATCCACAAACCAGCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS CCA 72 bp | GCTGGTTTGTGGATCCAGTGGGAGGGTCAGGGTTGCTaGTTGCTGCCGCCAGACCTCTCCGAAGCCGCTCCA | + |
Preference number: 6 (lower is better) Translates to: AGLWIQWEGQGC*LLPPDLSEAAP Trigger: TGGAGCGGCTTCGGAGAGGTCTGGCGGCAGCAACCAGCAACCCTGACCCTCCCACTGGATCCACAAACCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS CCA 72 bp | CACCTCCCGTGGGTAGCAGCTGGTTTGTGGATCCAGTaGGAGGGTCAGGGTTGCTGGTTGCTGCCGCCAGAC | + |
Preference number: 6 (lower is better) Translates to: HLPWVAAGLWIQ*EGQGCWLLPPD Trigger: GTCTGGCGGCAGCAACCAGCAACCCTGACCCTCCCACTGGATCCACAAACCAGCTGCTACCCACGGGAGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS CAA 72 bp | GGTTTGTGGATCCAGTGGGAGGGTCAGGGTTGCTGGTaGCTGCCGCCAGACCTCTCCGAAGCCGCTCCAGAC | + |
Preference number: 6 (lower is better) Translates to: GLWIQWEGQGCW*LPPDLSEAAPD Trigger: GTCTGGAGCGGCTTCGGAGAGGTCTGGCGGCAGCAACCAGCAACCCTGACCCTCCCACTGGATCCACAAACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS CAA 72 bp | AGCAGCTGGTTTGTGGATCCAGTGGGAGGGTCAGGGTaGCTGGTTGCTGCCGCCAGACCTCTCCGAAGCCGC | + |
Preference number: 6 (lower is better) Translates to: SSWFVDPVGGSG*LVAAARPLRSR Trigger: GCGGCTTCGGAGAGGTCTGGCGGCAGCAACCAGCAACCCTGACCCTCCCACTGGATCCACAAACCAGCTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS CAA 90 bp | GTAGCAGCTGGTTTGTGGATCCAGTGGGAGGGTCAGGGTTGCTGGTaGCTGCCGCCAGACCTCTCCGAAGCCGCTCCAGACTCTCACCGG | + |
Preference number: 6 (lower is better) Translates to: VAAGLWIQWEGQGCW*LPPDLSEAAPDSHR Trigger: CCGGTGAGAGTCTGGAGCGGCTTCGGAGAGGTCTGGCGGCAGCAACCAGCAACCCTGACCCTCCCACTGGATCCACAAACCAGCTGCTAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS GCA 72 bp | GTTTGTGGATCCAGTGGGAGGGTCAGGGTTGCTGGTTaGTGCCGCCAGACCTCTCCGAAGCCGCTCCAGACT | + |
Preference number: 6 (lower is better) Translates to: VCGSSGRVRVAG*CRQTSPKPLQT Trigger: AGTCTGGAGCGGCTTCGGAGAGGTCTGGCGGCAGCAACCAGCAACCCTGACCCTCCCACTGGATCCACAAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS CCA 72 bp | CCAAGTCCTGGACCCCCTGAGCACGATCACCTCCCGTaGGTAGCAGCTGGTTTGTGGATCCAGTGGGAGGGT | + |
Preference number: 6 (lower is better) Translates to: PSPGPPEHDHLP*VAAGLWIQWEG Trigger: ACCCTCCCACTGGATCCACAAACCAGCTGCTACCCACGGGAGGTGATCGTGCTCAGGGGGTCCAGGACTTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS GCA 72 bp | CTCCAGACTCTCACCGGTCACCAACGCGGACAACACTaGGGCCAGAAAGAGCTTCAGCATCACCGACGGCAG | + |
Preference number: 6 (lower is better) Translates to: LQTLTGHQRGQH*GQKELQHHRRQ Trigger: CTGCCGTCGGTGATGCTGAAGCTCTTTCTGGCCGCAGTGTTGTCCGCGTTGGTGACCGGTGAGAGTCTGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS CAA 72 bp | CCTGAGCACGATCACCTCCCGTGGGTAGCAGCTGGTTaGTGGATCCAGTGGGAGGGTCAGGGTTGCTGGTTG | + |
Preference number: 6 (lower is better) Translates to: PEHDHLPWVAAG*WIQWEGQGCWL Trigger: CAACCAGCAACCCTGACCCTCCCACTGGATCCACAAACCAGCTGCTACCCACGGGAGGTGATCGTGCTCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS TCA 72 bp | AGGTTCAGATCTGTCCCTTCCAAGTCCTGGACCCCCTaGGCACGATCACCTCCCGTGGGTAGCAGCTGGTTT | + |
Preference number: 6 (lower is better) Translates to: RFRSVPSKSWTP*ARSPPVGSSWF Trigger: AAACCAGCTGCTACCCACGGGAGGTGATCGTGCTCAGGGGGTCCAGGACTTGGAAGGGACAGATCTGAACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS TCA 72 bp | TGCACTCCCCGTGGATGCAGTAGTCCTTGTATTTCCTaGGGCATGGGTCTCTCTTCTTCCCTAACCCCTTTC | + |
Preference number: 6 (lower is better) Translates to: CTPRGCSSPCIS*GMGLSSSLTPF Trigger: GAAAGGGGTTAGGGAAGAAGAGAGACCCATGCCTCAGGAAATACAAGGACTACTGCATCCACGGGGAGTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS GCA 72 bp | ATTTGCAAGAGGGAGTACGGAACTCCTGCAGGTATCTaGACTCCCCGTGGATGCAGTAGTCCTTGTATTTCC | + |
Preference number: 6 (lower is better) Translates to: ICKREYGTPAGI*TPRGCSSPCIS Trigger: GGAAATACAAGGACTACTGCATCCACGGGGAGTGCAGATACCTGCAGGAGTTCCGTACTCCCTCTTGCAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS GCA 72 bp | CCTTTCCTTTCTTCTTCTTTTTCCCATTCCTTTCTTTaGTTGGGGTGGCCAGGCCTTGTGGCTTGGAGGAGA | + |
Preference number: 6 (lower is better) Translates to: PFLSSSFSHSFL*LGWPGLVAWRR Trigger: TCTCCTCCAAGCCACAAGGCCTGGCCACCCCAAGCAAAGAAAGGAATGGGAAAAAGAAGAAGAAAGGAAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |
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CDS CCA 72 bp | GACAGTACTACAGCCACCACAGCCAAGACTGTAGTGTaGTCATATGTGTATAGGGGATTCTCCACTGGTAGA | + |
Preference number: 6 (lower is better) Translates to: DSTTATTAKTVV*SYVYRGFSTGR Trigger: TCTACCAGTGGAGAATCCCCTATACACATATGACCACACTACAGTCTTGGCTGTGGTGGCTGTAGTACTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025363.7 |