Pregenerated sensors for HAX1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027944Ensembl transcript IDs: ENSMUST00000079724.9, ENSMUST00000197432.5, ENSMUST00000197725.5, ENSMUST00000197767.5, ENSMUST00000197786.5, ENSMUST00000198782.2, ENSMUST00000199163.2
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GAGTCAAGATCTTTGTCCTCTTTGGCTCTAGAATGGGGACTCACAGGCCATGTAGAGTCTCGTAGTGTCTaGCCCTCCCGCAGTCTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: ESRSLSSLALEWGLTGHVESRSV*PSRSLS Trigger: TGAGAGACTGCGGGAGGGGCAGACACTACGAGACTC...TACATGGCCTGTGAGTCCCCATTCTAGAGCCAAAGAGGACAAAGATCTTGACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199163.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGGGAGTCAAGATCTTTGTCCTCTTTGGCTCTAGAATGGGGACTCACAGGCCAGAAACCGAATTCCTCTaGAGGCTGAGAACCATCAAA | + |
|
Preference number: 2 (lower is better) Translates to: LGVKIFVLFGSRMGTHRPETEFL*RLRTIK Trigger: TTTGATGGTTCTCAGCCTCCAGAGGAATTCGGTTTC...TGGCCTGTGAGTCCCCATTCTAGAGCCAAAGAGGACAAAGATCTTGACTCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199163.2 |
||
| 3UTR CCA 72 bp | CCCTCCCCTGGGGCTGAAGCTGAAACCGAATTCCTCTaGAGGCTGAGAACCATCAAACGCATAGCTCTCTCG | + |
|
Preference number: 3 (lower is better) Translates to: PSPGAEAETEFL*RLRTIKRIALS Trigger: CGAGAGAGCTATGCGTTTGATGGTTCTCAGCCTCCAGAGGAATTCGGTTTCAGCTTCAGCCCCAGGGGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199163.2 |
||
| CDS-3UTR GCA 90 bp | GCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTGGGAAGGACCTGAAGGCCGAGTCTCGTAGTGTCTaGCCCTCCCGCAGTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AKLIGNGQQEGSGKDLKAESRSV*PSRSLS Trigger: TGAGAGACTGCGGGAGGGGCAGACACTACGAGACTC...GGCCTTCAGGTCCTTCCCACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079724.9 ENSMUST00000197767.5 |
||
| CDS-3UTR CCA 90 bp | GCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTGGGAAGGACCTGAAGGCCGGACCCAGACCTTCCTaGGAAACCTGGGAGTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: AKLIGNGQQEGSGKDLKAGPRPS*ETWESR Trigger: TCTTGACTCCCAGGTTTCCCAGGAAGGTCTGGGTCC...GGCCTTCAGGTCCTTCCCACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079724.9 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR CCA 90 bp | AGAGCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTGGGAAGGACCTGAAGCTTGATGGGTCACTGTaGTCTCCCTCCGGCCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RAKLIGNGQQEGSGKDLKLDGSL*SPSGPH Trigger: GTGAGGGCCGGAGGGAGACCACAGTGACCCATCAAG...CTTCAGGTCCTTCCCACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079724.9 ENSMUST00000197432.5 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR CCA 90 bp | CCTGGGATGACAGACAGAGCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTCTTGATGGGTCACTGTaGTCTCCCTCCGGCCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PGMTDRAKLIGNGQQEGSLDGSL*SPSGPH Trigger: GTGAGGGCCGGAGGGAGACCACAGTGACCCATCAAG...ACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGCTCTGTCTGTCATCCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079724.9 ENSMUST00000197432.5 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR TCA 90 bp | GCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTGGGAAGGACCTGAAGGCCGTATCATCCAACCTATaGAAAGGTCCCTGCGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: AKLIGNGQQEGSGKDLKAVSSNL*KGPCDP Trigger: GGGGTCGCAGGGACCTTTTCATAGGTTGGATGATAC...GGCCTTCAGGTCCTTCCCACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079724.9 ENSMUST00000197767.5 |
||
| CDS-3UTR TCA 90 bp | GACAGAGCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTGGGAAGGACCTGGATTTGGGCTGGGGTTaGAGAAGTGGACCCAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: DRAKLIGNGQQEGSGKDLDLGWG*RSGPRP Trigger: AGGTCTGGGTCCACTTCTTCAACCCCAGCCCAAATC...CAGGTCCTTCCCACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGCTCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079724.9 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR TCA 90 bp | GACAGAGCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTGGGAAGGACCTGCTGTCATGGGCTTCTTaGTGGGTCACTGTGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DRAKLIGNGQQEGSGKDLLSWAS*WVTVVS Trigger: GGAGACCACAGTGACCCATCAAGAAGCCCATGACAG...CAGGTCCTTCCCACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGCTCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079724.9 ENSMUST00000197432.5 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR GCA 90 bp | CCTGGGATGACAGACAGAGCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTGAGTCTCGTAGTGTCTaGCCCTCCCGCAGTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PGMTDRAKLIGNGQQEGSESRSV*PSRSLS Trigger: TGAGAGACTGCGGGAGGGGCAGACACTACGAGACTC...ACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGCTCTGTCTGTCATCCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079724.9 ENSMUST00000197767.5 |
||
| CDS-3UTR TCA 90 bp | CCTGGGATGACAGACAGAGCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTGATTTGGGCTGGGGTTaGAGAAGTGGACCCAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: PGMTDRAKLIGNGQQEGSDLGWG*RSGPRP Trigger: AGGTCTGGGTCCACTTCTTCAACCCCAGCCCAAATC...ACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGCTCTGTCTGTCATCCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079724.9 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR TCA 90 bp | AGAGCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTGGGAAGGACCTGAAGCTGTCATGGGCTTCTTaGTGGGTCACTGTGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RAKLIGNGQQEGSGKDLKLSWAS*WVTVVS Trigger: GGAGACCACAGTGACCCATCAAGAAGCCCATGACAG...CTTCAGGTCCTTCCCACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079724.9 ENSMUST00000197432.5 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR TCA 90 bp | GCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTGGGAAGGACCTGAAGGCCGGGATCATCCAAAGCTaGAGATCTCTGAGAGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AKLIGNGQQEGSGKDLKAGIIQS*RSLRVW Trigger: CCAGACTCTCAGAGATCTTCAGCTTTGGATGATCCC...GGCCTTCAGGTCCTTCCCACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079724.9 ENSMUST00000197432.5 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR TCA 90 bp | ACAGACAGAGCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTGGGAAGGACCTCACCAGGTGTTTCTaGCTCAGGACCAGGAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TDRAKLIGNGQQEGSGKDLTRCF*LRTRRV Trigger: CACTCTCCTGGTCCTGAGTCAGAAACACCTGGTGAG...GTCCTTCCCACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGCTCTGTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197767.5 |
||
| CDS-3UTR TCA 90 bp | ACAGACAGAGCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTGGGAAGGACGTATCATCCAACCTATaGAAAGGTCCCTGCGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: TDRAKLIGNGQQEGSGKDVSSNL*KGPCDP Trigger: GGGGTCGCAGGGACCTTTTCATAGGTTGGATGATAC...GTCCTTCCCACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGCTCTGTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079724.9 ENSMUST00000197767.5 |
||
| CDS-3UTR CCA 90 bp | GACAGAGCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTGGGAAGGACCTGCTCCACTGTCCCATCTaGCTTAGTGATCTTGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: DRAKLIGNGQQEGSGKDLLHCPI*LSDLGH Trigger: GTGACCAAGATCACTAAGCCAGATGGGACAGTGGAG...CAGGTCCTTCCCACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGCTCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079724.9 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR TCA 90 bp | GCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTGGGAAGGACCTGAAGGCCAAAGCTGAAGATCTCTaGGAGTCTGGATCACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AKLIGNGQQEGSGKDLKAKAEDL*ESGSLL Trigger: CAGAAGTGATCCAGACTCTCAGAGATCTTCAGCTTT...GGCCTTCAGGTCCTTCCCACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079724.9 ENSMUST00000197432.5 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR TCA 90 bp | ACAGACAGAGCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTGGGAAGGACGGGATCATCCAAAGCTaGAGATCTCTGAGAGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TDRAKLIGNGQQEGSGKDGIIQS*RSLRVW Trigger: CCAGACTCTCAGAGATCTTCAGCTTTGGATGATCCC...GTCCTTCCCACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGCTCTGTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079724.9 ENSMUST00000197432.5 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR TCA 90 bp | AGAGCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTGGGAAGGACCTGAAGGGGATCATCCAAAGCTaGAGATCTCTGAGAGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RAKLIGNGQQEGSGKDLKGIIQS*RSLRVW Trigger: CCAGACTCTCAGAGATCTTCAGCTTTGGATGATCCC...CTTCAGGTCCTTCCCACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079724.9 ENSMUST00000197432.5 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR CCA 90 bp | GCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTGGGAAGGACCTGAAGGCCGAAACCGAATTCCTCTaGAGGCTGAGAACCATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: AKLIGNGQQEGSGKDLKAETEFL*RLRTIK Trigger: TTTGATGGTTCTCAGCCTCCAGAGGAATTCGGTTTC...GGCCTTCAGGTCCTTCCCACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079724.9 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR CCA 90 bp | GCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTGGGAAGGACCTGAAGGCCATCTGGAGCTGGTTTTaGGGATTCAGGTTTTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: AKLIGNGQQEGSGKDLKAIWSWF*GFRFCM Trigger: CATGCAAAACCTGAATCCCCAAAACCAGCTCCAGAT...GGCCTTCAGGTCCTTCCCACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079724.9 ENSMUST00000197767.5 |
||
| CDS-3UTR CCA 90 bp | ACAGACAGAGCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTGGGAAGGACCTCCACTGTCCCATCTaGCTTAGTGATCTTGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TDRAKLIGNGQQEGSGKDLHCPI*LSDLGH Trigger: GTGACCAAGATCACTAAGCCAGATGGGACAGTGGAG...GTCCTTCCCACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGCTCTGTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079724.9 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR CCA 90 bp | GCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTGGGAAGGACCTGAAGGCCAGTCTGGATCACTTCTaGAACTGTCATGGGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AKLIGNGQQEGSGKDLKASLDHF*NCHGLL Trigger: AAGAAGCCCATGACAGTTCCAGAAGTGATCCAGACT...GGCCTTCAGGTCCTTCCCACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079724.9 ENSMUST00000197432.5 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR CCA 90 bp | GCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTGGGAAGGACCTGAAGGCCAGATCTCTGAGAGTCTaGATCACTTCTGGAACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: AKLIGNGQQEGSGKDLKARSLRV*ITSGTV Trigger: GACAGTTCCAGAAGTGATCCAGACTCTCAGAGATCT...GGCCTTCAGGTCCTTCCCACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079724.9 ENSMUST00000197432.5 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR TCA 90 bp | GCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTGGGAAGGACCTGAAGGCCTCACAGAGATACTTTTaGAATACGATTTGGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AKLIGNGQQEGSGKDLKASQRYF*NTIWAG Trigger: CCCAGCCCAAATCGTATTTCAAAAGTATCTCTGTGA...GGCCTTCAGGTCCTTCCCACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079724.9 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR CCA 90 bp | GACAGAGCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTGGGAAGGACCTGGAAACCGAATTCCTCTaGAGGCTGAGAACCATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: DRAKLIGNGQQEGSGKDLETEFL*RLRTIK Trigger: TTTGATGGTTCTCAGCCTCCAGAGGAATTCGGTTTC...CAGGTCCTTCCCACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGCTCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079724.9 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR TCA 90 bp | CCTGGGATGACAGACAGAGCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTAAAGCTGAAGATCTCTaGGAGTCTGGATCACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PGMTDRAKLIGNGQQEGSKAEDL*ESGSLL Trigger: CAGAAGTGATCCAGACTCTCAGAGATCTTCAGCTTT...ACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGCTCTGTCTGTCATCCCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079724.9 ENSMUST00000197432.5 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR TCA 90 bp | ACAGACAGAGCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTGGGAAGGACAAAGCTGAAGATCTCTaGGAGTCTGGATCACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TDRAKLIGNGQQEGSGKDKAEDL*ESGSLL Trigger: CAGAAGTGATCCAGACTCTCAGAGATCTTCAGCTTT...GTCCTTCCCACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGCTCTGTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079724.9 ENSMUST00000197432.5 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR CCA 90 bp | AGAGCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTGGGAAGGACCTGAAGAGTCTGGATCACTTCTaGAACTGTCATGGGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RAKLIGNGQQEGSGKDLKSLDHF*NCHGLL Trigger: AAGAAGCCCATGACAGTTCCAGAAGTGATCCAGACT...CTTCAGGTCCTTCCCACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079724.9 ENSMUST00000197432.5 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR CCA 90 bp | ACAGACAGAGCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTGGGAAGGACAGATCTCTGAGAGTCTaGATCACTTCTGGAACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TDRAKLIGNGQQEGSGKDRSLRV*ITSGTV Trigger: GACAGTTCCAGAAGTGATCCAGACTCTCAGAGATCT...GTCCTTCCCACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGCTCTGTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079724.9 ENSMUST00000197432.5 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR CCA 90 bp | CCTGGGATGACAGACAGAGCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTAGATCTCTGAGAGTCTaGATCACTTCTGGAACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGMTDRAKLIGNGQQEGSRSLRV*ITSGTV Trigger: GACAGTTCCAGAAGTGATCCAGACTCTCAGAGATCT...ACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGCTCTGTCTGTCATCCCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079724.9 ENSMUST00000197432.5 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR TCA 90 bp | ACAGACAGAGCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTGGGAAGGACTCACAGAGATACTTTTaGAATACGATTTGGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TDRAKLIGNGQQEGSGKDSQRYF*NTIWAG Trigger: CCCAGCCCAAATCGTATTTCAAAAGTATCTCTGTGA...GTCCTTCCCACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGCTCTGTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079724.9 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR TCA 90 bp | CCTGGGATGACAGACAGAGCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTTCACAGAGATACTTTTaGAATACGATTTGGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGMTDRAKLIGNGQQEGSSQRYF*NTIWAG Trigger: CCCAGCCCAAATCGTATTTCAAAAGTATCTCTGTGA...ACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGCTCTGTCTGTCATCCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079724.9 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR CCA 90 bp | ACTGGCATAAGCTCAATTAATTGTTTCACACATTTAAGACCCTGGGATGACAGACTTGATGGGTCACTGTaGTCTCCCTCCGGCCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TGISSINCFTHLRPWDDRLDGSL*SPSGPH Trigger: GTGAGGGCCGGAGGGAGACCACAGTGACCCATCAAG...TCTGTCATCCCAGGGTCTTAAATGTGTGAAACAATTAATTGAGCTTATGCCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079724.9 ENSMUST00000197432.5 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR TCA 90 bp | ACTGGCATAAGCTCAATTAATTGTTTCACACATTTAAGACCCTGGGATGACAGAGATTTGGGCTGGGGTTaGAGAAGTGGACCCAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: TGISSINCFTHLRPWDDRDLGWG*RSGPRP Trigger: AGGTCTGGGTCCACTTCTTCAACCCCAGCCCAAATC...TCTGTCATCCCAGGGTCTTAAATGTGTGAAACAATTAATTGAGCTTATGCCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079724.9 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR TCA 90 bp | ACTGGCATAAGCTCAATTAATTGTTTCACACATTTAAGACCCTGGGATGACAGACTGTCATGGGCTTCTTaGTGGGTCACTGTGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TGISSINCFTHLRPWDDRLSWAS*WVTVVS Trigger: GGAGACCACAGTGACCCATCAAGAAGCCCATGACAG...TCTGTCATCCCAGGGTCTTAAATGTGTGAAACAATTAATTGAGCTTATGCCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079724.9 ENSMUST00000197432.5 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR CCA 90 bp | ACTGGCATAAGCTCAATTAATTGTTTCACACATTTAAGACCCTGGGATGACAGAGGACCCAGACCTTCCTaGGAAACCTGGGAGTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TGISSINCFTHLRPWDDRGPRPS*ETWESR Trigger: TCTTGACTCCCAGGTTTCCCAGGAAGGTCTGGGTCC...TCTGTCATCCCAGGGTCTTAAATGTGTGAAACAATTAATTGAGCTTATGCCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079724.9 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR TCA 90 bp | ACTGGCATAAGCTCAATTAATTGTTTCACACATTTAAGACCCTGGGATGACAGAGGGATCATCCAAAGCTaGAGATCTCTGAGAGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TGISSINCFTHLRPWDDRGIIQS*RSLRVW Trigger: CCAGACTCTCAGAGATCTTCAGCTTTGGATGATCCC...TCTGTCATCCCAGGGTCTTAAATGTGTGAAACAATTAATTGAGCTTATGCCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079724.9 ENSMUST00000197432.5 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR CCA 90 bp | ACTGGCATAAGCTCAATTAATTGTTTCACACATTTAAGACCCTGGGATGACAGACTCCACTGTCCCATCTaGCTTAGTGATCTTGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TGISSINCFTHLRPWDDRLHCPI*LSDLGH Trigger: GTGACCAAGATCACTAAGCCAGATGGGACAGTGGAG...TCTGTCATCCCAGGGTCTTAAATGTGTGAAACAATTAATTGAGCTTATGCCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079724.9 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR CAA 90 bp | GACAGAGCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTGGGAAGGACCTGCGATTTGGGCTGGGGTaGAAGAAGTGGACCCAGACC | + |
|
Preference number: 5 (lower is better) Translates to: DRAKLIGNGQQEGSGKDLRFGLG*KKWTQT Trigger: GGTCTGGGTCCACTTCTTCAACCCCAGCCCAAATCG...CAGGTCCTTCCCACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGCTCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079724.9 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR CAA 90 bp | AGAGCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTGGGAAGGACCTGAAGCGATTTGGGCTGGGGTaGAAGAAGTGGACCCAGACC | + |
|
Preference number: 5 (lower is better) Translates to: RAKLIGNGQQEGSGKDLKRFGLG*KKWTQT Trigger: GGTCTGGGTCCACTTCTTCAACCCCAGCCCAAATCG...CTTCAGGTCCTTCCCACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079724.9 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS CCA 90 bp | AGGGATCATCCAAAGCTGAAGATCTCTGAGAGTCTGGATCACTTCTaGAACTGTCATGGGCTTCTTGATGGGTCACTGTGGTCTCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RDHPKLKISESLDHF*NCHGLLDGSLWSPS Trigger: GGAGGGAGACCACAGTGACCCATCAAGAAGCCCATGACAGTTCCAGAAGTGATCCAGACTCTCAGAGATCTTCAGCTTTGGATGATCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000079724.9 ENSMUST00000197432.5 ENSMUST00000197725.5 ENSMUST00000197767.5 ENSMUST00000197786.5 ENSMUST00000198782.2 |
||
| CDS-3UTR CAA 90 bp | GCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTGGGAAGGACCTGAAGGCCTGGGAGTCAAGATCTTaGTCCTCTTTGGCTCTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: AKLIGNGQQEGSGKDLKAWESRS*SSLALE Trigger: TTCTAGAGCCAAAGAGGACAAAGATCTTGACTCCCA...GGCCTTCAGGTCCTTCCCACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079724.9 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR CAA 90 bp | GACAGAGCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTGGGAAGGACCTGGTTCCTCCACTGTCTTaGTCCTCTTTGGCTCTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: DRAKLIGNGQQEGSGKDLVPPLS*SSLALE Trigger: TTCTAGAGCCAAAGAGGACAAAGACAGTGGAGGAAC...CAGGTCCTTCCCACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGCTCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197432.5 |
||
| CDS-3UTR CAA 90 bp | AGAGCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTGGGAAGGACCTGAAGAGATCTTTGTCCTCTTaGGCTCTAGAATGGGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: RAKLIGNGQQEGSGKDLKRSLSS*ALEWGL Trigger: GAGTCCCCATTCTAGAGCCAAAGAGGACAAAGATCT...CTTCAGGTCCTTCCCACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079724.9 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR CAA 90 bp | AGAGCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTGGGAAGGACCTGAAGTGGGAGTCAAGATCTTaGTCCTCTTTGGCTCTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RAKLIGNGQQEGSGKDLKWESRS*SSLALE Trigger: TTCTAGAGCCAAAGAGGACAAAGATCTTGACTCCCA...CTTCAGGTCCTTCCCACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079724.9 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR CAA 90 bp | CCTGGGATGACAGACAGAGCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTTGGGAGTCAAGATCTTaGTCCTCTTTGGCTCTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PGMTDRAKLIGNGQQEGSWESRS*SSLALE Trigger: TTCTAGAGCCAAAGAGGACAAAGATCTTGACTCCCA...ACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGCTCTGTCTGTCATCCCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079724.9 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR CAA 90 bp | GACAGAGCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTGGGAAGGACCTGGTCACAGAGATACTTTaGAAATACGATTTGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: DRAKLIGNGQQEGSGKDLVTEIL*KYDLGW Trigger: CCAGCCCAAATCGTATTTCAAAAGTATCTCTGTGAC...CAGGTCCTTCCCACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGCTCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079724.9 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS-3UTR CAA 90 bp | CCTGGGATGACAGACAGAGCTAAGCTTATTGGCAATGGGCAACAGGAAGGGAGTGTCACAGAGATACTTTaGAAATACGATTTGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PGMTDRAKLIGNGQQEGSVTEIL*KYDLGW Trigger: CCAGCCCAAATCGTATTTCAAAAGTATCTCTGTGAC...ACTCCCTTCCTGTTGCCCATTGCCAATAAGCTTAGCTCTGTCTGTCATCCCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079724.9 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS CCA 90 bp | TGGGAAACCTGGGAGTCAAGATCTTTGTCCTCTTTGGCTCTAGAATaGGGACTCACAGGCCATGTATCATCCAATAGATCATCAAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: WETWESRSLSSLALE*GLTGHVSSNRSSKP Trigger: TGGCTTTGATGATCTATTGGATGATACATGGCCTGTGAGTCCCCATTCTAGAGCCAAAGAGGACAAAGATCTTGACTCCCAGGTTTCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197786.5 |
||
| CDS-3UTR CAA 90 bp | ACTGGCATAAGCTCAATTAATTGTTTCACACATTTAAGACCCTGGGATGACAGAAGATCTTTGTCCTCTTaGGCTCTAGAATGGGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: TGISSINCFTHLRPWDDRRSLSS*ALEWGL Trigger: GAGTCCCCATTCTAGAGCCAAAGAGGACAAAGATCT...TCTGTCATCCCAGGGTCTTAAATGTGTGAAACAATTAATTGAGCTTATGCCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079724.9 ENSMUST00000197767.5 ENSMUST00000197786.5 |
||
| CDS CCA 72 bp | CCAAAGCTGAAGATCTCTGAGAGTCTGGATCACTTCTaGAACTGTCATGGGCTTCTTGATGGGTCACTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PKLKISESLDHF*NCHGLLDGSLW Trigger: CCACAGTGACCCATCAAGAAGCCCATGACAGTTCCAGAAGTGATCCAGACTCTCAGAGATCTTCAGCTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000079724.9 ENSMUST00000197432.5 ENSMUST00000197725.5 ENSMUST00000197767.5 ENSMUST00000197786.5 ENSMUST00000198782.2 |
||
| CDS TCA 72 bp | AGAATGGAAAAGGGATCATCCAAAGCTGAAGATCTCTaGGAGTCTGGATCACTTCTGGAACTGTCATGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RMEKGSSKAEDL*ESGSLLELSWA Trigger: AGCCCATGACAGTTCCAGAAGTGATCCAGACTCTCAGAGATCTTCAGCTTTGGATGATCCCTTTTCCATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000079724.9 ENSMUST00000197432.5 ENSMUST00000197725.5 ENSMUST00000197767.5 ENSMUST00000197786.5 ENSMUST00000198782.2 |
||
| CDS CCA 72 bp | TGGGAGTCAAGATCTTTGTCCTCTTTGGCTCTAGAATaGGGACTCACAGGCCATGTATCATCCAATAGATCA | + |
|
Preference number: 6 (lower is better) Translates to: WESRSLSSLALE*GLTGHVSSNRS Trigger: TGATCTATTGGATGATACATGGCCTGTGAGTCCCCATTCTAGAGCCAAAGAGGACAAAGATCTTGACTCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197786.5 |
||